Citrus Sinensis ID: 035642

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
Protein Sequence
MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Secondary Structure (PSIPRED)
cccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccEEEEccccEEcccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHEEEcccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEEEEccEccHHHHHHcccHHHHHHHHHHHHcccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEHcHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccccHHHHHHcc
Coil and Loop (DISEMBL)
MYSYVwwsneqnyfitggtrgIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKglkvtgsvcdlsSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISsvagvtaapltplygpyngamNQLTKHLEceqakdniransiapgvirtslsdairhdpaknkiveglvsrtpicrpgepdeVSSLVAFLcfpaasyitgqvicvdggmtvngfnptccpnaiDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQsellhvthpSRKHLAQVLLVIKVLQCLVVIVQYELFLNQimlprlqrpkdVIKLLV
Flexible Loop (DISEMBL)
MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEwklkglkvtgsvcdlssrEQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTslsdairhdpaknkiveglvsrtpicrPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLnqimlprlqrpKDVIKLLV
Low Complexity Region (SEG)
MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKlnllvnnaavavPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Disordered region (IsUnstruct)
*YSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL********LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQR*********
Disordered Region (DISOPRED)
***YVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGM***********LIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Disordered Region (DISEMBL)
MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Disordered Region (DISPRO)
******WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGTTKLQLCATLIPKVLSEFADKLHILVIKQSELLHVTHPSRKHLAQVLLVIKVLQCLVVIVQYELFLNQIMLPRLQRPKDVIKLLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	367	2.2.26 [Sep-21-2011]
Q9ASX2	266	Tropinone reductase homol	yes	no	0.686	0.947	0.605	1e-84
P50165	268	Tropinone reductase homol	N/A	no	0.673	0.921	0.591	4e-83
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.670	0.901	0.574	1e-80
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.673	0.95	0.564	1e-76
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.667	0.942	0.559	1e-76
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.637	0.838	0.375	1e-33
Q9GKX2	260	Dehydrogenase/reductase S	yes	no	0.637	0.9	0.367	5e-33
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	0.637	0.841	0.359	1e-30
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.637	0.841	0.359	2e-30
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.637	0.838	0.359	2e-30

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  313 bits (802), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 155/256 (60%), Positives = 192/256 (75%), Gaps = 4/256 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W    +   +TGGT+GIGHAIVEE AGFGA+IHTC+RN+ ELNE L +W+ KG +VTGSV
Sbjct: 10  WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD S R +REKLM+TVSS+F GKL++L+NN      K  LD TAE  S   STN ES +H
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G I+F+SS+AGV +A +  +Y    GA+NQL ++L CE A D IRA
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP VI T L++A+  D  K K+V   +SR P+ R GEP+EVSSLVAFLC PAASYIT
Sbjct: 190 NAVAPAVIATPLAEAVYDDEFK-KVV---ISRKPLGRFGEPEEVSSLVAFLCMPAASYIT 245

Query: 246 GQVICVDGGMTVNGFN 261
           GQ ICVDGG+TVNGF+
Sbjct: 246 GQTICVDGGLTVNGFS 261

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  308 bits (789), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 146/247 (59%), Positives = 187/247 (75%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGGTRGIG+AIVEELA FGA ++TCSR+Q +L+E L++W+ KG KV+G VCD+SS  Q
Sbjct: 21  LVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQ 80

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R+ LME+V+S F GKLN+L+NNA   +PKEA + TAE  S +  TNFE+ ++L +LAHPL
Sbjct: 81  RQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPL 140

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKASGN  IVF SS AGV A PL+ +Y    GA+NQ+TK L CE AKD+IR N++AP +I
Sbjct: 141 LKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWII 200

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T + +A    P++ K +E L+ R P+ R GEP EVSSLV +LC P ASYITGQ+ICVDG
Sbjct: 201 NTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIICVDG 260

Query: 254 GMTVNGF 260
           G TVNGF
Sbjct: 261 GYTVNGF 267

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  300 bits (768), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/247 (57%), Positives = 189/247 (76%), Gaps = 1/247 (0%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG++GIG+AIVEELAG GA ++TCSRN+ EL+E L+ W+ KGL V GSVCDL SR +
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 84

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R+KLM+TV+ +F GKLN+LVNNA V + KEA D T +  + +  TNFE+ +HLS++A+PL
Sbjct: 85  RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 144

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS NG ++F+SS+AG +A P   LY    GA+NQ+TK L CE AKDNIR NS+APGVI
Sbjct: 145 LKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVI 204

Query: 194 RTSLSD-AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T L + AI+ +P + + ++  + +TP+ R G+P EVS+L+AFLCFPAASYITGQ+I  D
Sbjct: 205 LTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWAD 264

Query: 253 GGMTVNG 259
           GG T NG
Sbjct: 265 GGFTANG 271

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  287 bits (734), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 140/248 (56%), Positives = 178/248 (71%), Gaps = 1/248 (0%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+RGIG+ IVEELA  GA ++TCSRNQ ELN+ L +W+ KG KV  SVCDLSSR +
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R++LM TV++ F GKLN+LVNNA + + KEA D T E  S + S NFE+ +HLS LAHP 
Sbjct: 73  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 132

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS  G +VFISSV+G  A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI
Sbjct: 133 LKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 192

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TSL +    DP + + +  L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDG
Sbjct: 193 ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 252

Query: 254 GMTVN-GF 260
           G+  N GF
Sbjct: 253 GLMANCGF 260

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  286 bits (733), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/245 (55%), Positives = 177/245 (72%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG+RGIG+ IVEELA  GA ++TCSRNQ EL+E L +W+ KG  V  SVCDLSSR +R
Sbjct: 14  VTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSER 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E+ M+TVS+ F GKLN+LVNNA + + KEA D T E  S + S NFE+ +HLS LAHP L
Sbjct: 74  EEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFL 133

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           KAS  G +VFISS++G +A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI 
Sbjct: 134 KASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA 193

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           TS+ +    DP + + ++ L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDGG
Sbjct: 194 TSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVDGG 253

Query: 255 MTVNG 259
              NG
Sbjct: 254 FMANG 258

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  144 bits (362), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  ++  +   K +GL VTG+VC +   E 
Sbjct: 37  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAED 96

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           RE+L+ T   +  G +++L++NAAV+      +D   E    +   N ++   L+K   P
Sbjct: 97  RERLVATAVKL-HGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVP 155

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            +   G G IV +SS+A  +  P  P  GPYN    A+  LTK+L  E A+ N+R N +A
Sbjct: 156 EMAKRGGGSIVIVSSIAAYS--PF-PSLGPYNVSKTALLGLTKNLALELAESNVRVNCLA 212

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+IRTS S  +  DPA+    E + +   I R G+P+E + +V+FLC   ASYITG+ +
Sbjct: 213 PGLIRTSFSRVLWEDPARQ---ESIKATFQIKRIGKPEECAGIVSFLCSEDASYITGETV 269

Query: 250 CVDGG 254
            V GG
Sbjct: 270 VVAGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  142 bits (357), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 139/245 (56%), Gaps = 11/245 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  ++  +   + +GL VTG+VC +   E 
Sbjct: 18  IVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAED 77

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           RE+L+ T  ++  G +++LV+NAAV     + +D T E    +   N +++  ++K   P
Sbjct: 78  RERLVATALNL-HGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVP 136

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            ++  G G +V ++S+A     P + L GPYN    A+  LTK+L  E A  NIR N +A
Sbjct: 137 EMEKRGGGSVVIVASIAAFN--PFSGL-GPYNVSKTALVGLTKNLALELAAQNIRVNCLA 193

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I+TS S A+  D A+    E ++ +  I R G+P+E + +V+FLC   ASYITG+ +
Sbjct: 194 PGLIKTSFSKALWEDKAQE---ENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETV 250

Query: 250 CVDGG 254
            V GG
Sbjct: 251 VVAGG 255

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 11/245 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  +++ +   + +GL VTG+VC +   E 
Sbjct: 36  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAED 95

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           RE+L+ T   +  G +++LV+NAAV       +D T E        N ++   ++K   P
Sbjct: 96  RERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVP 154

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            ++  G G +V +SS+A  +    +P + PYN    A+  LTK L  E A  NIR N +A
Sbjct: 155 EMEKRGGGSVVIVSSIAAFSP---SPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLA 211

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I+TS S  +  D  K    E +     I R GEP++ + +V+FLC   ASYITG+ +
Sbjct: 212 PGLIKTSFSRMLWMDKEKE---ESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETV 268

Query: 250 CVDGG 254
            V GG
Sbjct: 269 VVGGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 11/245 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  +++ +   + +GL VTG+VC +   E 
Sbjct: 36  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAED 95

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           RE+L+ T   +  G +++LV+NAAV       +D T E        N ++   ++K   P
Sbjct: 96  RERLVATAVKL-HGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVP 154

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            ++  G G +V +SS+A  +    +P + PYN    A+  LTK L  E A  NIR N +A
Sbjct: 155 EMEKRGGGSVVIVSSIAAFSP---SPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLA 211

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I+TS S  +  D  K    E +     I R GEP++ + +V+FLC   ASYITG+ +
Sbjct: 212 PGLIKTSFSRMLWMDKEKE---ESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETV 268

Query: 250 CVDGG 254
            V GG
Sbjct: 269 VVGGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 11/245 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  ++  +   + +GL VTG VC +   E 
Sbjct: 37  LVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAED 96

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           REKL+     + QG +++LV+NAAV       +D T E  + + S N  +   + K   P
Sbjct: 97  REKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVP 155

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            ++  G G +V +SSVAG     L P  GPYN    A+  LTK+   E A  NIR N +A
Sbjct: 156 AMEKRGGGSVVIVSSVAGFV---LFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLA 212

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I+T  S  +  + A+ ++++       I R G+P++   +V+FLC   ASYI G+ +
Sbjct: 213 PGLIKTHFSSVLWKEKAREEMIK---ETMQIRRLGKPEDCVGIVSFLCSEDASYINGETV 269

Query: 250 CVDGG 254
            V GG
Sbjct: 270 VVGGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
297740326	277	unnamed protein product [Vitis vinifera]	0.673	0.891	0.659	1e-91
225440458	325	PREDICTED: tropinone reductase 1-like [V	0.694	0.784	0.643	2e-91
225440460	267	PREDICTED: tropinone reductase homolog [	0.692	0.951	0.650	8e-91
297746010	270	unnamed protein product [Vitis vinifera]	0.692	0.940	0.626	8e-89
147769646	270	hypothetical protein VITISV_035429 [Viti	0.692	0.940	0.622	1e-87
147838761	270	hypothetical protein VITISV_016037 [Viti	0.692	0.940	0.622	1e-87
359478613	539	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.670	0.456	0.638	1e-87
225434831	270	PREDICTED: tropinone reductase homolog A	0.692	0.940	0.622	1e-87
297746005	270	unnamed protein product [Vitis vinifera]	0.692	0.940	0.610	2e-87
359478910	270	PREDICTED: tropinone reductase homolog A	0.664	0.903	0.631	2e-87

>gi|297740326|emb|CBI30508.3| unnamed protein product [Vitis vinifera]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 163/247 (65%), Positives = 194/247 (78%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGGTRGIGHAIVEELA FGA +HTCSRNQ EL+E LQ WK KG KV+GSVCD+SSR Q
Sbjct: 16  LVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVSGSVCDVSSRPQ 75

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R +LM+TVSS+F GKLN+LVNNA   + K   + T E +S +  TNFES +HLS+L +PL
Sbjct: 76  RTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFESAYHLSQLGYPL 135

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKASG G IVFISSVAGV A P+  +Y    GAMNQ+T++L CE A+DNIR N+IAP VI
Sbjct: 136 LKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDNIRVNTIAPWVI 195

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TSL    + DP+  + ++ ++SRTPICR GEPDEVSSLVAFLCFPAASYITGQVICVDG
Sbjct: 196 NTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAASYITGQVICVDG 255

Query: 254 GMTVNGF 260
           G +V GF
Sbjct: 256 GYSVTGF 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440458|ref|XP_002271432.1| PREDICTED: tropinone reductase 1-like [Vitis vinifera]

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 164/255 (64%), Positives = 195/255 (76%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGTRGIGHAIVEELA FGA +HTCSRNQ EL+E LQ WK KG KV+GSV
Sbjct: 15  WSLQGTTALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVSGSV 74

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QR +LM+TVSS+F GKLN+LVNNA   + K   + T E +S +  TNFES +H
Sbjct: 75  CDVSSRPQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFESAYH 134

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+L +PLLKASG G IVFISSVAGV A P+  +Y    GAMNQ+T++L CE A+DNIR 
Sbjct: 135 LSQLGYPLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDNIRV 194

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+IAP VI TSL    + DP+  + ++ ++SRTPICR GEPDEVSSLVAFLCFPAASYIT
Sbjct: 195 NTIAPWVINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAASYIT 254

Query: 246 GQVICVDGGMTVNGF 260
           GQVICVDGG +V GF
Sbjct: 255 GQVICVDGGYSVTGF 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440460|ref|XP_002271837.1| PREDICTED: tropinone reductase homolog [Vitis vinifera] gi|297740324|emb|CBI30506.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (871), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 166/255 (65%), Positives = 195/255 (76%), Gaps = 1/255 (0%)

Query: 7   WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           WS E     +TGG+RGIGHAIVEELA FGA +HTCSRNQ EL++RLQEWK KG KV+ S+
Sbjct: 13  WSLEGMTALVTGGSRGIGHAIVEELAAFGATVHTCSRNQEELDQRLQEWKNKGFKVSASL 72

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QR +LMETVSSIF GKL++LVNNA   + KEA + TAE  ST+  TNFES +H
Sbjct: 73  CDVSSRSQRTQLMETVSSIFDGKLSILVNNAGTIILKEATECTAEDFSTIMGTNFESAYH 132

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           L +L HPLLKASGNG IVFISS++G+ A P + +Y    GAMNQ+TK+L CE AKD IR 
Sbjct: 133 LCQLGHPLLKASGNGSIVFISSISGLLAFPASSIYAASKGAMNQVTKNLACEWAKDGIRV 192

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+IAP +I+TSL   I   P   + +  L+SRTPI RPGEPDEVS LVAFLCFP ASYIT
Sbjct: 193 NTIAPWIIKTSLLHVIDDHPNIKENMSRLISRTPISRPGEPDEVSPLVAFLCFPVASYIT 252

Query: 246 GQVICVDGGMTVNGF 260
           GQVICVDGG  V GF
Sbjct: 253 GQVICVDGGYKVTGF 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746010|emb|CBI16066.3| unnamed protein product [Vitis vinifera]

 Score =  333 bits (854), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 161/257 (62%), Positives = 197/257 (76%), Gaps = 3/257 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSV
Sbjct: 14  WSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSV 73

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QREKLMETVSS+F+GKLN+LVNNAA+ + K  ++ TAE  ST+ + NFESV+H
Sbjct: 74  CDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYH 133

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G IVFISSVAGV +      Y    GAMNQLTK+L CE A+DNIR+
Sbjct: 134 LSQLAHPLLKASGAGSIVFISSVAGVVSVKYLSAYAVTKGAMNQLTKNLACEWAEDNIRS 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP  I+T + D +  +      +EG+++R P+ R G+P EVSSLVAFLC PA+SYIT
Sbjct: 194 NAVAPWCIKTPMVDQMLSN---KTFLEGVINRAPLRRVGDPKEVSSLVAFLCLPASSYIT 250

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ ICVDGG+TVNGF P
Sbjct: 251 GQTICVDGGVTVNGFEP 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera]

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 160/257 (62%), Positives = 195/257 (75%), Gaps = 3/257 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSV
Sbjct: 14  WSLKGMTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLKDWKAKGFGVSGSV 73

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QREKLMETVSS+F GKLN+LVNNAA+ + K  ++ TAE  ST+ + NFESV+H
Sbjct: 74  CDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYH 133

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G IVFISSVAGV +      Y    GAMNQLTK+L CE A+DNIR+
Sbjct: 134 LSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRS 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP  I+T + D +  +      +E +++R P+ R G+P EVSSLVAFLC PA+SYIT
Sbjct: 194 NAVAPWYIKTPMVDQMLSN---KTFLEXVINRAPLRRVGDPKEVSSLVAFLCLPASSYIT 250

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ ICVDGG+TVNGF P
Sbjct: 251 GQTICVDGGVTVNGFEP 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838761|emb|CAN69507.1| hypothetical protein VITISV_016037 [Vitis vinifera]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 160/257 (62%), Positives = 196/257 (76%), Gaps = 3/257 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSV
Sbjct: 14  WSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSV 73

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QREKLMETVSS+F+GKLN+LVNNAA+ + K  ++ TAE  ST+ + NFESV+H
Sbjct: 74  CDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYH 133

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G IVFISSVAGV +      Y    GAMNQLTK+L CE A+DNIR+
Sbjct: 134 LSQLAHPLLKASGAGSIVFISSVAGVASIKYLSAYSVTKGAMNQLTKNLACEWAEDNIRS 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP  I+T + D +  +      +E +++R P+ R G+P EVSSLVAFLC PA+SYIT
Sbjct: 194 NAVAPWYIKTPMVDQMLSNKT---FLEEVINRAPLRRVGDPKEVSSLVAFLCLPASSYIT 250

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ ICVDGG+TVNGF P
Sbjct: 251 GQTICVDGGVTVNGFEP 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478613|ref|XP_003632145.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized short-chain type dehydrogenase/reductase y4vI-like [Vitis vinifera]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 159/249 (63%), Positives = 195/249 (78%), Gaps = 3/249 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSVCD+SS  Q
Sbjct: 291 LVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSSPAQ 350

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           REKLMETVSS+F+GKLN+LVNNAA+ + K  ++ TAE  ST+ + NFESV+HLS+LAHPL
Sbjct: 351 REKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLAHPL 410

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKASG G IVFISSVAGV +      Y    GAMNQLTK+L CE A+DNIR+N++AP  I
Sbjct: 411 LKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAPWYI 470

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T + D +  +      +EG+++R P+ R G+P EVSSLVAFLC PA+SYITGQ ICVDG
Sbjct: 471 KTPMVDQMLSNKT---FLEGVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTICVDG 527

Query: 254 GMTVNGFNP 262
           G+TVNGF P
Sbjct: 528 GVTVNGFEP 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434831|ref|XP_002282554.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|297746017|emb|CBI16073.3| unnamed protein product [Vitis vinifera]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 160/257 (62%), Positives = 196/257 (76%), Gaps = 3/257 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSV
Sbjct: 14  WSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSV 73

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QREKLMETVSS+F+GKLN+LVNNAA+ + K  ++ TAE  ST+ + NFESV+H
Sbjct: 74  CDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYH 133

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G IVFISSVAGV +      Y    GAMNQLTK+L CE A+DNIR+
Sbjct: 134 LSQLAHPLLKASGAGSIVFISSVAGVVSIKYLSAYSVTKGAMNQLTKNLACEWAEDNIRS 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP  I+T + D +  +      +E +++R P+ R G+P EVSSLVAFLC PA+SYIT
Sbjct: 194 NAVAPWYIKTPMVDQMFSNKT---FLEEVINRAPLRRVGDPKEVSSLVAFLCLPASSYIT 250

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ ICVDGG+TVNGF P
Sbjct: 251 GQTICVDGGVTVNGFEP 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746005|emb|CBI16061.3| unnamed protein product [Vitis vinifera]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 157/257 (61%), Positives = 196/257 (76%), Gaps = 3/257 (1%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W        +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSV
Sbjct: 14  WSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSV 73

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR QREKLM+T+SS+F GKLN+L+NNAA+ + K  ++ TAE  ST+ + NFESV+H
Sbjct: 74  CDVSSRAQREKLMQTISSVFNGKLNILINNAAITIQKPTVEVTAEEFSTIMAINFESVYH 133

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS++AHPLLKASG G IVFISSV G+ A      Y    GAMNQLTK+L CE A+DNIR+
Sbjct: 134 LSQIAHPLLKASGAGSIVFISSVCGIVAHKNISAYSVTKGAMNQLTKNLACEWAEDNIRS 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP  I+T + D +  +      +EG+++RTP+ R G+P EVSS+VAFLC PA+SYIT
Sbjct: 194 NAVAPWYIKTPMVDQMLSNKT---FLEGVINRTPLRRVGDPKEVSSVVAFLCLPASSYIT 250

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ ICVDGGMTVNGF P
Sbjct: 251 GQTICVDGGMTVNGFEP 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/247 (63%), Positives = 197/247 (79%), Gaps = 3/247 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGGT+GIGHAIVEELAG GA IHTCSR +TELNE L++WK KG  V+GSVCD+SSR Q
Sbjct: 22  LVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSSRAQ 81

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           REKLM+T+SS+F GKLN+L+NNAA+++ K  ++ TAE  ST+ +TNFESV+HLS++AHPL
Sbjct: 82  REKLMQTISSVFNGKLNILINNAAISIQKPTIEVTAEEFSTIMATNFESVYHLSQIAHPL 141

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKASG G IVFISSV+G+ A      Y    GAMNQLTK+L CE AKDNIR+N++AP  I
Sbjct: 142 LKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLTKNLACEWAKDNIRSNAVAPWYI 201

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T + + +  + A    +E +++R P+ R G+P EVSSLVAFLC PA+SYITGQ+ICVDG
Sbjct: 202 KTPMVEQMLTNQA---FLEEVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQIICVDG 258

Query: 254 GMTVNGF 260
           GMTVNGF
Sbjct: 259 GMTVNGF 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
TAIR|locus:2025072	266	AT1G07440 [Arabidopsis thalian	0.683	0.943	0.593	5.1e-74
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.683	0.936	0.582	9.9e-71
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.686	0.954	0.570	7e-70
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.683	0.958	0.564	2.4e-69
TAIR|locus:2042992	260	TRI "tropinone reductase" [Ara	0.686	0.969	0.562	3e-69
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.683	0.936	0.571	1e-68
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.683	0.933	0.550	1.1e-66
TAIR|locus:2043087	322	AT2G29260 [Arabidopsis thalian	0.689	0.785	0.536	1.7e-66
TAIR|locus:2043012	269	AT2G29320 [Arabidopsis thalian	0.686	0.936	0.540	2.8e-66
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.662	0.896	0.572	2.8e-66

TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 152/256 (59%), Positives = 186/256 (72%)

Query:     7 WS-NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS   +   +TGGT+GIGHAIVEE AGFGA+IHTC+RN+ ELNE L +W+ KG +VTGSV
Sbjct:    10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD S R +REKLM+TVSS+F GK             K  LD TAE  S   STN ES +H
Sbjct:    70 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             LS+LAHPLLKASG G I+F+SS+AGV +A +  +Y    GA+NQL ++L CE A D IRA
Sbjct:   130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             N++AP VI T L++A+  D  K K+V   +SR P+ R GEP+EVSSLVAFLC PAASYIT
Sbjct:   190 NAVAPAVIATPLAEAVYDDEFK-KVV---ISRKPLGRFGEPEEVSSLVAFLCMPAASYIT 245

Query:   246 GQVICVDGGMTVNGFN 261
             GQ ICVDGG+TVNGF+
Sbjct:   246 GQTICVDGGLTVNGFS 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 149/256 (58%), Positives = 182/256 (71%)

Query:     7 WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS E     +TGG++G+G A+VEELA  GA +HTC+R++T+L ERL+EW+ KG +VT SV
Sbjct:    14 WSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAKGFEVTTSV 73

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD+SSREQREKLMETVSS+FQGK             K + + TAE  S L +TN ES FH
Sbjct:    74 CDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFH 133

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             LS++AHPLLKASG+G IVF+SSVAG+     + +YG   GAMNQL + L CE A DNIR 
Sbjct:   134 LSQIAHPLLKASGSGSIVFMSSVAGLVHTGAS-IYGASKGAMNQLGRSLACEWASDNIRV 192

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             NS+ P VI T L+  I  D    K VE    +TP+ R GE +EVSSLVAFLCFPAASYIT
Sbjct:   193 NSVCPWVITTPLTSFIFSDEKLRKAVE---DKTPMGRVGEANEVSSLVAFLCFPAASYIT 249

Query:   246 GQVICVDGGMTVNGFN 261
             GQ ICVDGG +VNGF+
Sbjct:   250 GQTICVDGGASVNGFS 265

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 146/256 (57%), Positives = 178/256 (69%)

Query:     7 WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS   +   +TGGTRGIG A+VEELA FGA +HTCSRNQ ELN  L +WK  GL V+GSV
Sbjct:     7 WSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSV 66

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD S R+QREKL++  SS F GK             K  ++ ++E  + + STN ES FH
Sbjct:    67 CDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFH 126

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             LS++AHPLLKASG G IVFISSVAG+       +YG   GA+NQLT++L CE A DNIR 
Sbjct:   127 LSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRT 186

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             N +AP  I+TSL + +     K + VE +VSRTP+ R GEP+EVSSLVAFLC PA+SYIT
Sbjct:   187 NCVAPWYIKTSLVETLLE---KKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYIT 243

Query:   246 GQVICVDGGMTVNGFN 261
             GQVI VDGG TVNGF+
Sbjct:   244 GQVISVDGGFTVNGFS 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 145/257 (56%), Positives = 182/257 (70%)

Query:     7 WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS +  N  +TGGT+GIG A+VEEL+  GA +HTC+R++T+L ERL+EW+ KG +VT S+
Sbjct:     5 WSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTSI 64

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD+S REQREKLMETVSS+FQGK             K   + TAE  S L +TN +S FH
Sbjct:    65 CDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFH 124

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             +S+LAHPLLKASG+G IV +SS+AGV    +  +YG   GAMNQL ++L CE A DNIR 
Sbjct:   125 ISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRT 184

Query:   186 NSIAPGVIRTSL-SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
             N+I P +I T L SD +  +  K +  E    RTP+ R GE +EVS LVAFLC PAASYI
Sbjct:   185 NAICPWLITTPLISDLLSVEEMKKEAEE----RTPMGRVGEANEVSPLVAFLCLPAASYI 240

Query:   245 TGQVICVDGGMTVNGFN 261
             TGQVICVDGG+TVNGF+
Sbjct:   241 TGQVICVDGGLTVNGFS 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 144/256 (56%), Positives = 177/256 (69%)

Query:     7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS +     +TGG  GIGHAIVEELAGFGA IH C  ++T LN+ L EW+ KG +V+GSV
Sbjct:     5 WSLQGLTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGSV 64

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD S+R +RE LM+TV++IF GK             K  ++  AE  S L STN ES +H
Sbjct:    65 CDASNRLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAYH 124

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             LS+L+HPLLKASGNGII FISS AG+ +     +YG   GA+NQL ++L CE AKD IRA
Sbjct:   125 LSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIRA 184

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             N++AP  I T+L+     D   N+I   L SRTP+ R GEP EV+SLVAFLC PAASYIT
Sbjct:   185 NAVAPNFITTALAKPFLEDAGFNEI---LSSRTPLGRAGEPREVASLVAFLCLPAASYIT 241

Query:   246 GQVICVDGGMTVNGFN 261
             GQ ICVDGG+TVNGF+
Sbjct:   242 GQTICVDGGLTVNGFS 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 147/257 (57%), Positives = 179/257 (69%)

Query:     7 WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS E     +TGG++G+G A+VEELA  GA +HTC+R++T+L E L+EW+ KGL+VT SV
Sbjct:    14 WSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKGLQVTTSV 73

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD+SSR+QREKLMETVSS+FQGK             K   + TAE  S + +TN ES FH
Sbjct:    74 CDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLESTFH 133

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
              S+LAHPLLKASG+G IV +SSVAGV     T +YG   GAMNQL ++L CE A DNIRA
Sbjct:   134 FSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACEWASDNIRA 193

Query:   186 NSIAPGVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
             NS+ P  I T S  D +     K K VE +   TP+ R GE +EVSSLVAFLC PAASYI
Sbjct:   194 NSVCPWFITTPSTKDFLGDKDVKEK-VESV---TPLRRVGEANEVSSLVAFLCLPAASYI 249

Query:   245 TGQVICVDGGMTVNGFN 261
             TGQ ICVDGG T+NGF+
Sbjct:   250 TGQTICVDGGFTINGFS 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 141/256 (55%), Positives = 174/256 (67%)

Query:     7 WS-NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS       +TGG++GIG A+VEELA  GA +HTC+R++T+L ERL+EW+ KG +VT SV
Sbjct:    13 WSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTSV 72

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD+SSR+QR KLMETVSS++QGK             K   + TAE  S + +TN ES FH
Sbjct:    73 CDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAFH 132

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             LS+LAHPLLKASG+G IV ISS AGV    +  +YG   GAMNQL ++L CE A DNIR 
Sbjct:   133 LSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIRT 192

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             NS+ P  I T LS+    +  K + V      TP+ R GE +EVS LVAFLC P+ASYIT
Sbjct:   193 NSVCPWYITTPLSNDFFDEEFKKEAVR----TTPMGRVGEANEVSPLVAFLCLPSASYIT 248

Query:   246 GQVICVDGGMTVNGFN 261
             GQ ICVDGG TVNGF+
Sbjct:   249 GQTICVDGGATVNGFS 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 138/257 (53%), Positives = 175/257 (68%)

Query:     7 WS-NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS N  +  +TGGTRGIG AIVEELAG GA +HTC+RN+ EL   L +W   G +V GSV
Sbjct:    66 WSLNGMSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVAGSV 125

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD+S R QRE LMETVSS+F+GK             K  ++ TA   STL STNFESVFH
Sbjct:   126 CDVSDRSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFESVFH 185

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             L +LA+PLL+ S  G +VFISSV+G  +     +     GA+NQLT+ L CE AKDNIR 
Sbjct:   186 LCQLAYPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDNIRI 245

Query:   186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             N++AP  I+TS+ + +    +  + +E + S TP+ R GEP EVSS VAFLC PA+SYIT
Sbjct:   246 NAVAPWYIKTSMVEQVL---SNKEYLEEVYSVTPLGRLGEPREVSSAVAFLCLPASSYIT 302

Query:   246 GQVICVDGGMTVNGFNP 262
             GQ++CVDGGM++NGF P
Sbjct:   303 GQILCVDGGMSINGFFP 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043012 AT2G29320 [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 139/257 (54%), Positives = 177/257 (68%)

Query:     7 WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
             WS +     +TG   GIG+AIVEELAGFGA IH C  ++T LN+ L EW+ KG +V+GSV
Sbjct:    11 WSLQGMTALVTGAASGIGYAIVEELAGFGAKIHICDISKTLLNQSLSEWENKGFQVSGSV 70

Query:    66 CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
             CD++S  +REKLM+TVSSIF GK             K   +  A+  +   STN E+ +H
Sbjct:    71 CDVTSHPEREKLMQTVSSIFDGKLNILVNNVGVLRGKPTTEYVADDFTFHISTNLEAAYH 130

Query:   126 LSKLAHPLLKASGNGIIVFISSVAGVTAA-PLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
               +L+HPLLKASG G IVF+SSVAGV +      +YG   GA+NQL ++L CE AKD IR
Sbjct:   131 FCQLSHPLLKASGYGSIVFLSSVAGVVSLIDCGSIYGLTKGALNQLARNLACEWAKDGIR 190

Query:   185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
             AN++AP V++T+ S +   D +K    EGL+SRTP+ R GEP+EVSSLV FLC PAASYI
Sbjct:   191 ANAVAPNVVKTAQSQSFLEDVSKK---EGLLSRTPLGRVGEPNEVSSLVVFLCLPAASYI 247

Query:   245 TGQVICVDGGMTVNGFN 261
             TGQ ICVDGG+TVNGF+
Sbjct:   248 TGQTICVDGGLTVNGFS 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 142/248 (57%), Positives = 177/248 (71%)

Query:    15 ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
             +TGG++GIG A+VEELA  GA IHTC+R++T+L E L++W+ KG +VT SVCD+SSR++R
Sbjct:    23 VTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTSVCDVSSRDKR 82

Query:    75 EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             EKLMETVS+IF+GK             K  L  TAE  S   +TN ES FHLS+LAHPLL
Sbjct:    83 EKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQLAHPLL 142

Query:   135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
             KASG+G IV ISSV+GV       +YG   GAMNQL ++L CE A DNIR NS+ P  I 
Sbjct:   143 KASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCPWFIE 202

Query:   195 TSL-SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
             T L ++++ ++  + K VE   SR P+ R GE +EVSSLVAFLC PAASYITGQ ICVDG
Sbjct:   203 TPLVTESLSNEEFR-KEVE---SRPPMGRVGEVNEVSSLVAFLCLPAASYITGQTICVDG 258

Query:   254 GMTVNGFN 261
             G TVNGF+
Sbjct:   259 GFTVNGFS 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ASX2	TRNH1_ARATH	1, ., 1, ., 1, ., -	0.6054	0.6866	0.9473	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00021369001 SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (262 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	367
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-123
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	4e-77
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-64
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-61
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-55
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-53
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-52
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-51
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-51
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-51
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-50
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-50
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-50
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-49
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	6e-49
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-47
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-45
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-44
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-42
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-41
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-40
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	6e-40
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-39
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-39
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-39
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-39
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-38
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-38
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-38
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-38
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-37
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-37
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-37
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-37
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-36
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-36
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-36
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-36
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-36
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-35
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-34
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-34
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-34
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	6e-34
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	8e-34
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-33
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-33
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-33
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-33
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-33
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-32
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-32
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	4e-32
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-32
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-32
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	6e-32
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	8e-32
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-31
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-31
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	6e-31
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-30
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-30
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-30
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-29
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-29
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-29
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-29
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	5e-29
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-29
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-28
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-28
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-28
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-28
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-28
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-28
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-28
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-28
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-28
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	8e-28
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-27
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-27
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-27
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-27
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	8e-27
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-27
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	8e-27
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-26
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-26
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-26
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-26
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-26
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-26
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-26
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-26
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	4e-26
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-26
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-26
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-26
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-25
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-25
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-25
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-24
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-24
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-24
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-24
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	4e-24
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-24
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	4e-24
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-24
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-23
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-23
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-23
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-23
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-23
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-23
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-23
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-23
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-23
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-23
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-23
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	7e-23
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-22
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-22
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-22
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-22
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-22
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-22
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-22
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-22
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	7e-22
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-21
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-21
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-21
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-21
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-21
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-21
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	7e-21
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-20
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-20
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-20
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-20
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-20
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-20
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-20
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-20
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-20
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	4e-20
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	6e-20
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-19
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-19
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-19
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-19
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-19
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-19
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	7e-19
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-18
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	2e-18
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-18
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-18
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-17
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-17
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-17
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	4e-17
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-17
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	6e-17
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	6e-17
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	8e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-16
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-16
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-16
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	4e-16
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-16
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-15
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-15
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	5e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-15
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-14
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-14
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-13
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-13
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-13
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-13
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-13
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-12
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	5e-12
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	9e-12
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-11
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-11
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-11
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-11
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	4e-11
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-11
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-11
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	1e-10
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-10
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-10
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	6e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-10
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-10
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	1e-09
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	1e-09
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-09
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-09
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-09
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	4e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	6e-09
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-09
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-09
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-08
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-08
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-08
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-08
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	2e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	3e-08
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-08
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	5e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-08
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	7e-08
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-08
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	1e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-07
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	5e-07
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	6e-07
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	8e-07
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-06
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-06
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	6e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	7e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	7e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-06
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	8e-06
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	8e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	9e-06
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-05
pfam08659	181	pfam08659, KR, KR domain	2e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-05
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	7e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-04
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	6e-04
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	7e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.001
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	0.001
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	0.003

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  354 bits (911), Expect = e-123
 Identities = 152/253 (60%), Positives = 191/253 (75%), Gaps = 4/253 (1%)

Query: 7   WSNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W+ E +   +TGGT+GIG+AIVEELAG GA ++TC+RNQ EL+E L EW+ KG KV GSV
Sbjct: 2   WNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSV 61

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
           CD+SSR +R++LM+TV+S F GKLN+LVNNA   + KEA D T E  S + STNFE+ +H
Sbjct: 62  CDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYH 121

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASGNG IVFISSVAGV A P    YG   GA+NQLT+ L CE AKDNIR 
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP VI T L + +       + ++ ++ RTP+ R GEP+EV++LVAFLC PAASYIT
Sbjct: 182 NAVAPWVIATPLVEPVIQQK---ENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYIT 238

Query: 246 GQVICVDGGMTVN 258
           GQ+I VDGG+T N
Sbjct: 239 GQIIAVDGGLTAN 251

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  237 bits (607), Expect = 4e-77
 Identities = 104/257 (40%), Positives = 141/257 (54%), Gaps = 6/257 (2%)

Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK--LKGLKVTG 63
           W  + Q   ITG ++GIG AI  E  G GA +   +R+   L +   E        +V G
Sbjct: 5   WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHG 64

Query: 64  SVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV 123
              D+S  E R  +++ V   +   L++LVNNA   + K A+D T +    +  TN  S 
Sbjct: 65  LAADVSDDEDRRAILDWVEDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSA 123

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
           F LS+ AHPLLK   +  IV I SV+G+T       YG    A+ Q+T++L  E A+D I
Sbjct: 124 FELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGI 183

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N++AP  IRT L+     DP      E ++ RTP+ R GEP+EV++ VAFLC PAASY
Sbjct: 184 RVNAVAPWYIRTPLTSGPLSDPDY---YEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY 240

Query: 244 ITGQVICVDGGMTVNGF 260
           ITGQ I VDGG    GF
Sbjct: 241 ITGQCIAVDGGFLRYGF 257

Length = 257

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  202 bits (517), Expect = 7e-64
 Identities = 87/239 (36%), Positives = 119/239 (49%), Gaps = 6/239 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG AI   LA  GA +    RN+  L   L   +  G        D+S  E 
Sbjct: 2   LVTGASSGIGRAIARRLAREGAKVVLADRNEEAL-AELAAIEALGGNAVAVQADVSDEED 60

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L+E     F G+L++LVNNA +A P    + T E    +   N   VF L++ A P 
Sbjct: 61  VEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K  G G IV ISSVAG+   P    Y     A+  LT+ L  E A   IR N++APG++
Sbjct: 120 MKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLV 179

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T +   +  + A+ ++        P+ R G P+EV+  V FL    ASYITGQVI VD
Sbjct: 180 DTPMLAKLGPEEAEKELAA----AIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  196 bits (500), Expect = 5e-61
 Identities = 92/245 (37%), Positives = 128/245 (52%), Gaps = 9/245 (3%)

Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG + GIG AI E LA  G   +I     N+    E L+E K +G        D+SS E
Sbjct: 10  VTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVKADVSSEE 68

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E L+E +   F GK+++LVNNA ++      D T E    +   N   V  L++ A P
Sbjct: 69  DVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP 127

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +    +G+IV ISS+ G+  A    LY    GA+N  TK L  E A   IR N++APG 
Sbjct: 128 YMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGA 187

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T +  +      ++K  EGL    P+ R G+P+E++ +V FL    ASYITGQ+I VD
Sbjct: 188 IDTEMWSSF---SEEDK--EGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD 242

Query: 253 GGMTV 257
           GG T 
Sbjct: 243 GGWTC 247

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  182 bits (464), Expect = 1e-55
 Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RGIG AI   LA  GA +     N+        E +  G +    V D+S    
Sbjct: 9   LVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAA 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHLSKLAHP 132
              L+E     F G L++LVNNA +         +  ++   +   N    F++ + A P
Sbjct: 69  VRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVID-VNLTGTFNVVRAALP 126

Query: 133 LLKASGNGIIVFISSVAGVTAAP-LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            +  +  G IV ISSV+GVT  P  T  Y      +   TK L  E A   I  N++APG
Sbjct: 127 PMIKARYGRIVNISSVSGVTGNPGQTN-YSAAKAGVIGFTKALALELASRGITVNAVAPG 185

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T +++ +  +         ++   P+ R G+P+EV++ VAFL   AASYITGQVI V
Sbjct: 186 FIDTDMTEGLPEEVK-----AEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPV 240

Query: 252 DGGM 255
           +GGM
Sbjct: 241 NGGM 244

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  175 bits (446), Expect = 4e-53
 Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 12/249 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSS 70
            +TG + GIG AI   LA  GA ++    R++ E  E L     +  G +      D+S 
Sbjct: 9   LVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSD 68

Query: 71  -REQREKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSK 128
             E  E L+      F G++++LVNNA +A P     + T E    +   N    F L++
Sbjct: 69  DEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTR 127

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A PL+K      IV ISSVAG+   P    Y     A+  LTK L  E A   IR N++
Sbjct: 128 AALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAV 184

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP-AASYITGQ 247
           APG I T ++ A+       + ++ L +R P+ R G P+EV++ VAFL    AASYITGQ
Sbjct: 185 APGYIDTPMTAALESAEL--EALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQ 242

Query: 248 VICVDGGMT 256
            + VDGG+ 
Sbjct: 243 TLPVDGGLL 251

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  173 bits (440), Expect = 5e-52
 Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 6/246 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG  I    A  GA +    RN+        E    G +      D+S     
Sbjct: 10  VTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAADVSDEADV 68

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E  +      F G +++LVNNA         LD        + + N +S +  ++ A P 
Sbjct: 69  EAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPA 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G G IV ++S AG+   P    Y    GA+  LTK L  E   D IR N++AP V+
Sbjct: 128 MRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVV 187

Query: 194 RTSLSDAIRHDP-AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T L +A   +P  +N+     ++  P+ R G P+++++   FL    AS+ITG  + VD
Sbjct: 188 ETGLLEAFMGEPTPENR--AKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVD 245

Query: 253 GGMTVN 258
           GG  V 
Sbjct: 246 GGRCVG 251

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  171 bits (436), Expect = 1e-51
 Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 15/249 (6%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG  RG+G AI   LA  G   ++H    ++    E ++  +  G +      D++ +
Sbjct: 10  LVTGAARGLGRAIALRLARAGADVVVH-YRSDEEAAEELVEAVEALGRRAQAVQADVTDK 68

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
              E  +      F G++++LVNNA +   K   D + +    +   N   VFHL +   
Sbjct: 69  AALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV 127

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSI 188
           P ++    G IV ISSVAG+      P    Y      +  LTK L  E A+  I  N +
Sbjct: 128 PPMRKQRGGRIVNISSVAGLPG---WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMV 184

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG I T   D       + +  +   + TP+ R G P++++  VAFLC  A+ YITGQV
Sbjct: 185 APGDIDT---DMKEATIEEAREAKD--AETPLGRSGTPEDIARAVAFLCSDASDYITGQV 239

Query: 249 ICVDGGMTV 257
           I V GG+ V
Sbjct: 240 IEVTGGVDV 248

Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  171 bits (435), Expect = 2e-51
 Identities = 87/243 (35%), Positives = 129/243 (53%), Gaps = 7/243 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI  +LA  GA +    R+  E  E + +E K  G+K  G VCD+S RE
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRE 61

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             + ++E +     G +++LVNNA +      +    E    +  TN   VF+L++    
Sbjct: 62  DVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR 120

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++    +G I+ ISSV G+        Y      +   TK L  E A  NI  N++APG 
Sbjct: 121 IMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGF 180

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++D +       K+ + ++S+ P+ R G P+EV++ VAFL    ASYITGQVI VD
Sbjct: 181 IDTDMTDKL-----SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD 235

Query: 253 GGM 255
           GGM
Sbjct: 236 GGM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  171 bits (434), Expect = 3e-51
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 4/243 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG  I   LA  GA I   SRN+ +  E  Q  + +G++ T   CD+S  E  
Sbjct: 10  VTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEAI 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +  +E +   F GK+++LVNNA +     A +        +   N   VF +S+     +
Sbjct: 70  KAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHM 128

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
              G+G I+ I S+      P  P Y    G +  LTK L  E A+  I+ N+IAPG   
Sbjct: 129 IKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPGYFA 188

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T +++A+  DP  N  +     R P  R G+P+++     FL   A+ Y+ GQ+I VDGG
Sbjct: 189 TEMTEAVVADPEFNDDIL---KRIPAGRWGQPEDLVGAAVFLASDASDYVNGQIIFVDGG 245

Query: 255 MTV 257
              
Sbjct: 246 WLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  168 bits (429), Expect = 2e-50
 Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 42/260 (16%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG AI   LA  GA +    R++    E ++E K  G        D+S RE  
Sbjct: 5   VTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDREAV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK- 128
           E L+E V + F G +++LVNNA +       D     MS      + + N   VF++++ 
Sbjct: 65  EALVEKVEAEF-GPVDILVNNAGITR-----DNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ------------LTKHLEC 176
           +   ++K   +G I+ ISSV G+             G   Q             TK L  
Sbjct: 119 VIRAMIKR-RSGRIINISSVVGLI------------GNPGQANYAASKAGVIGFTKSLAK 165

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           E A   I  N++APG I T ++DA+       K+ E ++ + P+ R G P+EV++ VAFL
Sbjct: 166 ELASRGITVNAVAPGFIDTDMTDALP-----EKVKEKILKQIPLGRLGTPEEVANAVAFL 220

Query: 237 CFPAASYITGQVICVDGGMT 256
               ASYITGQV+ V+GGM 
Sbjct: 221 ASDDASYITGQVLHVNGGMY 240

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  168 bits (428), Expect = 3e-50
 Identities = 88/250 (35%), Positives = 128/250 (51%), Gaps = 13/250 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  GIG AI E  A  GA +H C  ++  L        L G KVT +V D++   Q
Sbjct: 15  LVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVADVADPAQ 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
            E++ +T    F G L++LVNNA +A P   +D  T  ++  TL + N    F+ ++ A 
Sbjct: 73  VERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTL-AVNLNGQFYFARAAV 130

Query: 132 PLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           PLLKASG+G +I+ +SSVAG    P    Y     A+  L K L  E     IR N+I P
Sbjct: 131 PLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILP 190

Query: 191 GVIRTSLSDAIRHDPAKNKIV------EGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           G++R      +    A+   +      +  + +  + R  EP+++++   FL  PAA YI
Sbjct: 191 GIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYI 250

Query: 245 TGQVICVDGG 254
           TGQ I VDG 
Sbjct: 251 TGQAISVDGN 260

Length = 264

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  167 bits (426), Expect = 4e-50
 Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 7/246 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIH-TCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +    + ++      + E    G K      D+S  E
Sbjct: 9   LVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE 68

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E+ ++   + F G +++LVNNA +      +    E    +  TN   VF+L+K    
Sbjct: 69  SVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVAR 127

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +    +G I+ ISSV G+   P    Y      +   TK L  E A   I  N++APG 
Sbjct: 128 PMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGF 187

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++DA+        + E ++++ P+ R G+P+E++S VAFL    A+YITGQ + V+
Sbjct: 188 IETDMTDALP-----EDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVN 242

Query: 253 GGMTVN 258
           GGM + 
Sbjct: 243 GGMVMG 248

Length = 248

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  166 bits (422), Expect = 2e-49
 Identities = 83/251 (33%), Positives = 116/251 (46%), Gaps = 7/251 (2%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
              +T  + GIG AI   LA  GA +  C+RN+  L     E +  G  V   V DL+  
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTDP 62

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  ++L+E     F G++++LVNNA    P    + T E           SV  + +   
Sbjct: 63  EDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVL 121

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G IV ISS+      P   L       +  L K L  E A D +  NS+ PG
Sbjct: 122 PGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLPG 181

Query: 192 VIRTS-LSDAIRHDPAKNKIVEGLV-----SRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
            I T  +   +     K  I          S+ P+ R G+P+E+++L+AFL    ASYIT
Sbjct: 182 YIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASYIT 241

Query: 246 GQVICVDGGMT 256
           GQ I VDGG+T
Sbjct: 242 GQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  165 bits (419), Expect = 6e-49
 Identities = 72/246 (29%), Positives = 105/246 (42%), Gaps = 6/246 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  RGIG AI   LA  GA +        +     +  +  G K      D+  R  
Sbjct: 10  LVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAA 69

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  +      F G+L++LV NA +       +   E    +   N    F L++ A P 
Sbjct: 70  LKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128

Query: 134 LKASGNGIIVFISSVAGVTAA-PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L  +G G IV  SSVAG     P    Y      +   T+ L  E A  NI  NS+ PG 
Sbjct: 129 LIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGG 188

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T       +     +  E + +  P+ R GEP+++++ V FL    A YITGQ + VD
Sbjct: 189 VDT---PMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVD 244

Query: 253 GGMTVN 258
           GG T+ 
Sbjct: 245 GGATLP 250

Length = 251

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  160 bits (407), Expect = 3e-47
 Identities = 92/245 (37%), Positives = 134/245 (54%), Gaps = 11/245 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T  T GIG AI   LA  GA +   SR Q  ++  +   + +GL VTG+VC +   E R
Sbjct: 15  VTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAEDR 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E+L+ T  ++  G +++LV+NAAV       LD+T E    +   N ++   ++K   P 
Sbjct: 75  ERLVATAVNLH-GGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVVPE 133

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           ++  G G +V +SSVA     P  P  GPYN    A+  LTK+L  E A  NIR N +AP
Sbjct: 134 MEKRGGGSVVIVSSVAAFH--PF-PGLGPYNVSKTALLGLTKNLAPELAPRNIRVNCLAP 190

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G+I+TS S A+  D A     E +     I R G+P++ + +V+FLC   ASYITG+ + 
Sbjct: 191 GLIKTSFSSALWMDKAVE---ESMKETLRIRRLGQPEDCAGIVSFLCSEDASYITGETVV 247

Query: 251 VDGGM 255
           V GG 
Sbjct: 248 VGGGT 252

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  156 bits (395), Expect = 2e-45
 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 24/253 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-------TELNERLQEWKLKGLKVTGSVCD 67
           +TGG RG+G A    L   GA +               EL +  + + L          D
Sbjct: 10  VTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHL----------D 59

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           ++  +    +++T    F G+L++LVNNA +        TT E    L   N   VF  +
Sbjct: 60  VTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGT 118

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRA 185
           +   P +K +G G I+ +SS+ G+   P    Y    GA+  LTK   LEC      IR 
Sbjct: 119 RAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRV 178

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           NS+ PG I T ++D +     +     G    TP+ R GEPDE++  V +L    +S++T
Sbjct: 179 NSVHPGYIYTPMTDELLIAQGE----MGNYPNTPMGRAGEPDEIAYAVVYLASDESSFVT 234

Query: 246 GQVICVDGGMTVN 258
           G  + VDGG T  
Sbjct: 235 GSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  153 bits (388), Expect = 1e-44
 Identities = 82/245 (33%), Positives = 128/245 (52%), Gaps = 5/245 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TGG+RGIG AI   LA  GA ++    +++    E   E +  G K      D+S  +
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQPQ 61

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E++   V   F G+L++LV+NAA    +   + T  +     +TN +++ H ++ A  
Sbjct: 62  DVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L++  G G IV ISS+  + A P     G    A+  L ++L  E     IR N+++PGV
Sbjct: 121 LMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPGV 180

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T   DA+ H P +  ++E   + TP  R G P +V+  V FLC  AA  ITGQ + VD
Sbjct: 181 IDT---DALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVVD 237

Query: 253 GGMTV 257
           GG+++
Sbjct: 238 GGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  146 bits (371), Expect = 7e-42
 Identities = 75/243 (30%), Positives = 112/243 (46%), Gaps = 4/243 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RG+G  I   LAG GA +    RN   L   +   +  G        D++  E  
Sbjct: 16  VTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAV 75

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
                 + +   G+L++LVNN      +   +     +  L  T+  +   LS+LA   +
Sbjct: 76  AAAFARIDAE-HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRM 134

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           K  G G I+ I+S+AG  A     +Y      +  L + L  E     I +N+IAPG   
Sbjct: 135 KRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFA 194

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T  + A+  DPA   +   L  RTP+ R G P+E++    FL  PAASY+ G V+ VDGG
Sbjct: 195 TETNAAMAADPA---VGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251

Query: 255 MTV 257
            +V
Sbjct: 252 YSV 254

Length = 256

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  144 bits (366), Expect = 3e-41
 Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSR 71
           ITG + GIG       A  GA +    R+   L E  Q     G+   K+   V DL+  
Sbjct: 8   ITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTEE 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E +++++ T  + F G+L++LVNNA +       D   E    + + N  +V +L+KLA 
Sbjct: 68  EGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTKLAV 126

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P L  +  G IV +SSVAG  + P    Y     A++Q T+    E A   +R NS++PG
Sbjct: 127 PHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVNSVSPG 185

Query: 192 VIRTSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           VI T     +   +    K +       P+ RPG  DEV+  +AFL   A+S+ITGQ++ 
Sbjct: 186 VIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSFITGQLLP 245

Query: 251 VDGG 254
           VDGG
Sbjct: 246 VDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  143 bits (362), Expect = 2e-40
 Identities = 86/250 (34%), Positives = 124/250 (49%), Gaps = 17/250 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           +TGG+RGIG AI   LA  GA   II+  +    E  E L   K  G+K     CD+SS+
Sbjct: 13  VTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELA--KKYGVKTKAYKCDVSSQ 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  EK  + +   F GK+++L+ NA + V K ALD T E  + +   N   VF+ ++ A 
Sbjct: 71  ESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAA 129

Query: 132 PLLKASGNGIIVFISSVAGVTA-APLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANS 187
            + K  G G ++  +S++G     P       YN    A+  L K L  E AK  IR NS
Sbjct: 130 KIFKKQGKGSLIITASMSGTIVNRPQP--QAAYNASKAAVIHLAKSLAVEWAKYFIRVNS 187

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+PG I T L+D         ++ +   S  P+ R   P+E+     +L   A+SY TG 
Sbjct: 188 ISPGYIDTDLTDF-----VDKELRKKWESYIPLKRIALPEELVGAYLYLASDASSYTTGS 242

Query: 248 VICVDGGMTV 257
            + +DGG T 
Sbjct: 243 DLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  141 bits (358), Expect = 6e-40
 Identities = 81/260 (31%), Positives = 120/260 (46%), Gaps = 37/260 (14%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-----GLKVTGSVCDL 68
           FITGG  GIG AI +  A  GA +    R      E L+    +     G +     CD+
Sbjct: 7   FITGGGTGIGKAIAKAFAELGASVAIAGRKP----EVLEAAAEEISSATGGRAHPIQCDV 62

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAA--VAVPKEALDTTAEYMSTLRSTN-FESV-- 123
              E  E  ++     F GK+++L+NNAA     P E+L           S N F++V  
Sbjct: 63  RDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESL-----------SPNGFKTVID 110

Query: 124 ------FHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
                 F+ +K     L++A   G I+ IS+    T +P           ++ LT+ L  
Sbjct: 111 IDLNGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAV 170

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           E     IR N+IAPG I T+  + + R  P+  K  + ++ R P+ R G P+E+++L  F
Sbjct: 171 EWGPYGIRVNAIAPGPIPTT--EGMERLAPSG-KSEKKMIERVPLGRLGTPEEIANLALF 227

Query: 236 LCFPAASYITGQVICVDGGM 255
           L   AASYI G  + VDGG 
Sbjct: 228 LLSDAASYINGTTLVVDGGQ 247

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 1e-39
 Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 6/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RG+G AI    A  GA +   +R +++L+E  ++ +  G +      DL+  E  
Sbjct: 15  VTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEAT 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL- 133
             L       F G+L+++VNN    +P   L T+ + ++   + N  +   L+  A PL 
Sbjct: 75  AGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLM 133

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+ SG G ++ ISS  G  A      YG    A+   T+    +     IR N+IAPG I
Sbjct: 134 LEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSI 192

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TS   A+    A +++   +   TP+ R G+P+++++   +L  PA SY+TG+ + VDG
Sbjct: 193 LTS---ALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG 249

Query: 254 GMT 256
           G+T
Sbjct: 250 GLT 252

Length = 263

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  140 bits (354), Expect = 1e-39
 Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 8/245 (3%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
              +TGG  GIG AI   LA  GA +                 +  G +  G  C+++S 
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHLSKLA 130
           +  E +++   S F G + +LVNNA    PK   +  T E        N  S F LS+L 
Sbjct: 61  QDLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLC 119

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P ++ +G G I+ ISS++          YG    A+N +T++L  +     IR N++AP
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 191 GVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           G ++T +L+  +       +I   ++  TP+ R GEP+++++   FLC PA+++++GQV+
Sbjct: 180 GAVKTDALASVL-----TPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVL 234

Query: 250 CVDGG 254
            V GG
Sbjct: 235 TVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  140 bits (355), Expect = 1e-39
 Identities = 80/247 (32%), Positives = 125/247 (50%), Gaps = 16/247 (6%)

Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG +RGIG AI + LA  G   +++  S ++    E + E +  G K      D+S   
Sbjct: 8   VTGASRGIGRAIAKRLARDGASVVVNYAS-SKAAAEEVVAEIEAAGGKAIAVQADVSDPS 66

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           Q  +L +     F G +++LVNNA V + K   +T+ E    + + N +  F + + A  
Sbjct: 67  QVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQEAAK 125

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIA 189
            L+    G I+ ISS   +TAA  TP YG Y G   A+   T+ L  E     I  N++A
Sbjct: 126 RLR--DGGRIINISSS--LTAA-YTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG + T +  A + + A    VEG    +P+ R GEP++++ +VAFL  P   ++ GQVI
Sbjct: 181 PGPVDTDMFYAGKTEEA----VEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQVI 236

Query: 250 CVDGGMT 256
             +GG  
Sbjct: 237 RANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  139 bits (352), Expect = 4e-39
 Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 9/252 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSREQ 73
           ITG  +GIG AI E LA  G  I     N  E  +   QE    G        D++ ++ 
Sbjct: 7   ITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDKDD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH-P 132
            E L++     F G  +++VNNA +A     L  T E +  + + N   V    + A   
Sbjct: 67  VEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAAARQ 125

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
             K    G I+  SS+AGV   P    Y     A+  LT+    E A   I  N+ APG+
Sbjct: 126 FKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAPGI 185

Query: 193 IRTSLSDAIRHDPAKNKI------VEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++T + D I  +  +              S  P+ R  EP++V+ LV+FL    + YITG
Sbjct: 186 VKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDSDYITG 245

Query: 247 QVICVDGGMTVN 258
           Q I VDGGM   
Sbjct: 246 QTILVDGGMVYR 257

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  138 bits (349), Expect = 1e-38
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 17/249 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHT----CSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
            ITGG+ G+G AI   LA  GA +        R + E +      +  G K  G   D+ 
Sbjct: 10  LITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVR 69

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLS 127
                   ++     F G+L++LVNNA +A    A    +  E+   +   N +  F+++
Sbjct: 70  DFAATRAALDAGVEEF-GRLDILVNNAGIA-TDAAFAELSIEEWDDVID-VNLDGFFNVT 126

Query: 128 K-LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +    P+++A   G IV I+SVAGV        Y      +  LTK L  E A   I  N
Sbjct: 127 QAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVN 186

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++APG I T ++D    + A  + +   V   P+ R GEPDEV++LVAFL   AASY+TG
Sbjct: 187 AVAPGAINTPMAD----NAAPTEHLLNPV---PVQRLGEPDEVAALVAFLVSDAASYVTG 239

Query: 247 QVICVDGGM 255
           QVI VDGG 
Sbjct: 240 QVIPVDGGF 248

Length = 249

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  138 bits (348), Expect = 1e-38
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 14/250 (5%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           + +   ITG   GIG  I    A  GA +     N    N  + E +  G +     CD+
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI 69

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR---STNFESVFH 125
           +S ++   L +   S   GK+++LVNNA    PK   D     M+  R     N  S FH
Sbjct: 70  TSEQELSALADFALSKL-GKVDILVNNAGGGGPK-PFDMP---MADFRRAYELNVFSFFH 124

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+L  P ++ +G G+I+ I+S+A          Y     A + L +++  +  + NIR 
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 186 NSIAPGVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           N IAPG I T +L   I  +     I + ++  TPI R G+P ++++   FLC PAAS++
Sbjct: 185 NGIAPGAILTDALKSVITPE-----IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV 239

Query: 245 TGQVICVDGG 254
           +GQ++ V GG
Sbjct: 240 SGQILTVSGG 249

Length = 255

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  137 bits (348), Expect = 2e-38
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 8/251 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG +GIG  I E LA  G  +     N+    E  +E    G K      D+S ++Q 
Sbjct: 5   VTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              ++  +  F G  +++VNNA VA     L+ T E +  + + N + V    + A    
Sbjct: 65  FSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQF 123

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           K  G+ G I+  +S+AG    P+   Y     A+  LT+    E A   I  N+  PG++
Sbjct: 124 KKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIV 183

Query: 194 RTSLSDAIRHDPAKNKI------VEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +T + + I  + ++          E   S   + RP EP++V+ LV+FL    + YITGQ
Sbjct: 184 KTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQ 243

Query: 248 VICVDGGMTVN 258
            I VDGGM  N
Sbjct: 244 SILVDGGMVYN 254

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  136 bits (344), Expect = 6e-38
 Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 8/249 (3%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           +   +TG + GIG AI   LA  GA  +++  S  +    E ++E K  G K      D+
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVVNYRS-KEDAAEEVVEEIKAVGGKAIAVQADV 62

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           S  E    L ++    F G L++LVNNA +     + + T E  + +   N    F  ++
Sbjct: 63  SKEEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAR 121

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            A     K+   G I+ +SSV      P    Y    G +  +TK L  E A   IR N+
Sbjct: 122 EAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNA 181

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           IAPG I T ++     DP +   +  L+   P+ R GEP+E+++  A+L    ASY+TG 
Sbjct: 182 IAPGAINTPINAEAWDDPEQRADLLSLI---PMGRIGEPEEIAAAAAWLASDEASYVTGT 238

Query: 248 VICVDGGMT 256
            + VDGGMT
Sbjct: 239 TLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  135 bits (342), Expect = 1e-37
 Identities = 86/246 (34%), Positives = 126/246 (51%), Gaps = 17/246 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV---CDLSSR 71
           ITGGTRGIG AI E     GA +         +     E + K L+  G     CD+ +R
Sbjct: 12  ITGGTRGIGRAIAEAFLREGAKV--------AVLYNSAENEAKELREKGVFTIKCDVGNR 63

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
           +Q +K  E V   F G++++LVNNA +   +P E  D   E  + +   N     + +  
Sbjct: 64  DQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDE--EKYNKMIKINLNGAIYTTYE 120

Query: 130 AHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
             PLLK S NG IV I+S AG+ TAA  T  Y      +  LT+ L  E  K  IR N++
Sbjct: 121 FLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAV 180

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG + T ++ + +      K+ E   ++T +   G+P++++++V FL    A YITGQV
Sbjct: 181 APGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQV 240

Query: 249 ICVDGG 254
           I  DGG
Sbjct: 241 IVADGG 246

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 2e-37
 Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG A     A  GA +    R+     E +   +  G +     CD++   + 
Sbjct: 12  VTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEV 71

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           + L+E   + + G+L+   NNA + + +  L + +      +   N + V+   K   PL
Sbjct: 72  KALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPL 130

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           + A G G IV  +SVAG+ AAP   +Y     A+  LTK    E AK  IR N++ P VI
Sbjct: 131 MLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVI 190

Query: 194 RTSLSD-AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T +   A   DP K    E   +  P+ R G+ +EV+S V +LC   AS+ TG  + VD
Sbjct: 191 DTDMFRRAYEADPRK---AEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVD 247

Query: 253 GGMT 256
           GG T
Sbjct: 248 GGAT 251

Length = 253

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 3e-37
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 20/244 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGGTRGIG  I       GA +  C R   E  +        G        D+   +Q 
Sbjct: 11  VTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD--------GRPAEFHAADVRDPDQV 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L++ +     G+L++LVNNA  +    A + +  +   +   N  +   +++ A+ ++
Sbjct: 63  AALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVM 121

Query: 135 KA-SGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G G IV I SV+G   +P T  YG     +  LT+ L  E A   +R N++  G++
Sbjct: 122 QQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLV 180

Query: 194 RTSLSDAIRHDPAKNKIVEGL--VSRT-PICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           RT  S+    D       EG+  V+ T P+ R   P +++    FL    ASY++G  + 
Sbjct: 181 RTEQSELHYGDA------EGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLE 234

Query: 251 VDGG 254
           V GG
Sbjct: 235 VHGG 238

Length = 252

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  133 bits (338), Expect = 4e-37
 Identities = 70/249 (28%), Positives = 107/249 (42%), Gaps = 13/249 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  RG+G A  E LA  GA +        E  E     +  G +      DL+    
Sbjct: 11  LVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPAS 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++  +  ++   G L+ LVNNA +   K A +   +    + + N    F + + A P 
Sbjct: 71  VQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129

Query: 134 LKASGNGIIV-FISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSIA 189
           L+ SG G IV   S  A   A    P  G Y    GA+  +T+ L  E     I  N+IA
Sbjct: 130 LRDSGRGRIVNLASDTALWGA----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIA 185

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+  T  +  +  D          +    + R   PD+V+  V FL   AA ++TGQ++
Sbjct: 186 PGLTATEATAYVPADER----HAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLL 241

Query: 250 CVDGGMTVN 258
            V+GG  +N
Sbjct: 242 PVNGGFVMN 250

Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 2e-36
 Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 15/250 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG+RG+G  I E L   GA +   +R   EL E     +  G+       D++     
Sbjct: 17  VTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADI 76

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK-LAHPL 133
           E+L E     F G +++LVNNA       A D   E    + + N   +F LS+ +A   
Sbjct: 77  ERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRS 135

Query: 134 LKASGNGIIVFISSVAGVTAAPL----TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           +   G G I+ ++SVAG+   P     T  Y    GA+   T+ L  E     IR N+IA
Sbjct: 136 MIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIA 195

Query: 190 PGVIRTSLSDAI--RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           PG   T ++     R         E L++ TP+ R G+ +++      L   A+ +ITGQ
Sbjct: 196 PGFFPTKMTRGTLERLG-------EDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQ 248

Query: 248 VICVDGGMTV 257
           ++ VDGG++ 
Sbjct: 249 ILAVDGGVSA 258

Length = 259

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 2e-36
 Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RGIG AI + LA  GA +   SR               G K     C +   EQ
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQ 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPK--EALDT-TAEYMSTLRSTNFESVFHLSKLA 130
            + L   +     G+L++LVNNAA A P     LDT    +  T+   N    F +S  A
Sbjct: 72  IDALFAHIRERH-GRLDILVNNAA-ANPYFGHILDTDLGAFQKTV-DVNIRGYFFMSVEA 128

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             L+K  G G IV ++SV GV+      +Y     A+  +TK    E A   IR N++ P
Sbjct: 129 GKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLP 188

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G+  T  + A+  + A   I++  ++  P+ R  EP E++  V +L   A+SY TG+ + 
Sbjct: 189 GLTDTKFASALFKNDA---ILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLN 245

Query: 251 VDGGMTV 257
           VDGG   
Sbjct: 246 VDGGYLS 252

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  138 bits (348), Expect = 2e-36
 Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 9/246 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG RGIG A+ +  A  G  +    R+     ++L E    G +      D++     
Sbjct: 274 ITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA-KKLAE--ALGDEHLSVQADITDEAAV 330

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E     + + + G+L++LVNNA +A   K +L+ +AE  + +   N    F  ++ A   
Sbjct: 331 ESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAA--A 387

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
              S  G+IV + S+A + A P    Y     A+  L++ L CE A   IR N++APG I
Sbjct: 388 RLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYI 447

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T    A++     +   + +  R P+ R G+P+EV+  +AFL  PAASY+ G  + VDG
Sbjct: 448 ETPAVLALKASGRAD--FDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG 505

Query: 254 GMTVNG 259
           G T  G
Sbjct: 506 GWTAFG 511

Length = 520

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  137 bits (346), Expect = 3e-36
 Identities = 86/252 (34%), Positives = 121/252 (48%), Gaps = 17/252 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A  +  A  G  +    RN     ER       G        D+S   Q 
Sbjct: 10  VTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQI 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEA--LDTTAEYMSTLRSTNFESVFHLSKLAHP 132
            +  E +   F G++++LVNNA V  P     LDTT E  + L++ N    + +++ A  
Sbjct: 67  REGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR 125

Query: 133 LLKASGNGI-IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           L+   G+G  IV ++S AG+ A P    Y     A+  LT+ L CE A   IR N++ PG
Sbjct: 126 LMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPG 185

Query: 192 VIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
            +RT     L  A + DP+       + SR P+ R G P+E++  V FL    ASYITG 
Sbjct: 186 YVRTQMVAELERAGKLDPS------AVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS 239

Query: 248 VICVDGGMTVNG 259
            + VDGG TV G
Sbjct: 240 TLVVDGGWTVYG 251

Length = 520

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 3e-36
 Identities = 73/245 (29%), Positives = 109/245 (44%), Gaps = 7/245 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A  +  A  GA +    R+              G +      D+ S E  
Sbjct: 10  VTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGDVGSAEAV 68

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E L++ V++ + G+L++LVNNA        + T       +   N   VF  +K A P++
Sbjct: 69  EALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIM 127

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           +  G G IV  +S   +        Y    GA+  LT+ +  + A D IR N++APG I 
Sbjct: 128 QRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTID 187

Query: 195 TSLSDAI--RH-DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           T     I  RH DP   +  E L +R P+ R G  +EV+    FL    +S+ TG  + V
Sbjct: 188 TPYFRRIFARHADPEALR--EALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVV 245

Query: 252 DGGMT 256
           DGG  
Sbjct: 246 DGGWL 250

Length = 252

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 2e-35
 Identities = 82/244 (33%), Positives = 120/244 (49%), Gaps = 7/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG  G+G      LA  GA II T      +   RL E   +G KVT    DL+  E 
Sbjct: 20  VTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--KEGRKVTFVQVDLTKPES 77

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            EK+++     F GK+++LVNNA        L+   E  + +   N  SV+HLS+    +
Sbjct: 78  AEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV 136

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G+G I+ I+S+         P Y      +  LTK    E A  NI+ N+IAPG I
Sbjct: 137 MAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYI 196

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T+ +  IR D  +N   + ++ R P  R GEPD++     FL   A+ Y+ G ++ VDG
Sbjct: 197 KTANTAPIRADKNRN---DEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDG 253

Query: 254 GMTV 257
           G  V
Sbjct: 254 GWLV 257

Length = 258

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 2e-34
 Identities = 89/250 (35%), Positives = 130/250 (52%), Gaps = 15/250 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTC----SRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ITGG  GIG A+    A  GA I         +  E  +R+++  +K L + G V D   
Sbjct: 51  ITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--E 108

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKL 129
              ++ + ETV  +  G+L++LVNNAA   P+++L D TAE +     TN  S FH++K 
Sbjct: 109 AFCKDAVEETVREL--GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKA 166

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A P LK  G+ II    S+ G         Y    GA++  T+ L     +  IR N++A
Sbjct: 167 ALPHLK-QGSAIIN-TGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVA 224

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG I T L  +      +   V    S TP+ RPG+P+E++    FL  P +SYITGQ++
Sbjct: 225 PGPIWTPLIPSDF--DEEK--VSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQML 280

Query: 250 CVDGGMTVNG 259
            V+GG+ VNG
Sbjct: 281 HVNGGVIVNG 290

Length = 290

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  127 bits (320), Expect = 2e-34
 Identities = 76/252 (30%), Positives = 111/252 (44%), Gaps = 12/252 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG AI   LA  GA +      +       +     G  V     D++  ++ 
Sbjct: 6   VTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKEDEI 65

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             ++   ++ F G L++LVNNA +    P E      E    + +    S FH  + A P
Sbjct: 66  ADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPP--EDWDRIIAVMLTSAFHTIRAALP 122

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +K  G G I+ I+S  G+ A+P    Y      +  LTK L  E A+  I  N+I PG 
Sbjct: 123 HMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPGY 182

Query: 193 IRTSLSDAIRHDPAKNK-------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +RT L +    D AK +       I E ++   P  R    DEV+    +L   AA+ IT
Sbjct: 183 VRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAAQIT 242

Query: 246 GQVICVDGGMTV 257
           GQ I +DGG T 
Sbjct: 243 GQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  126 bits (318), Expect = 3e-34
 Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 5/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI   LA  G  I    +R++    E  +E +  G K      ++   E+
Sbjct: 9   VTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEK 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +++   +   F G+L++ VNNAA  V + A++    +     + N +++   ++ A  L
Sbjct: 69  IKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G G I+ +SS+  +         G    A+  LT++L  E A   I  N+++ G +
Sbjct: 128 MEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAV 187

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T   DA++H P + +++E   ++TP  R  EP++V++ V FLC P A  I GQ I VDG
Sbjct: 188 DT---DALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDG 244

Query: 254 GMT 256
           G +
Sbjct: 245 GRS 247

Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 6e-34
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 14/243 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG A    LA  GA +   +RN   L+    E   + L++     D+      
Sbjct: 14  VTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL-----DVGDDAAI 68

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK-LAHPL 133
              +        G  + LVN A +A  + ALD TAE    + + N      +++ +A  +
Sbjct: 69  RAALAA-----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAM 123

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           + A   G IV +SS A +   P    Y     A++ +T+ L  E     IR NS+ P V 
Sbjct: 124 IAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVT 183

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T ++     DP K+     +++  P+ R  E D+V++ + FL   AAS ++G  + VDG
Sbjct: 184 LTPMAAEAWSDPQKS---GPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG 240

Query: 254 GMT 256
           G T
Sbjct: 241 GYT 243

Length = 245

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 8e-34
 Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 20/258 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG  I   LA  GA +     N        +  +  G K  G   D++  E 
Sbjct: 8   LVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEA 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAA---VAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
               ++     F G +++LVNNA    VA P E   T  E    + +   +  F  +K A
Sbjct: 68  INAGIDYAVETF-GGVDILVNNAGIQHVA-PIEDFPT--EKWKKMIAIMLDGAFLTTKAA 123

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANS 187
            P++KA G G I+ ++SV G+  +        Y  A   +  LTK +  E A   +  N+
Sbjct: 124 LPIMKAQGGGRIINMASVHGLVGSAGK---AAYVSAKHGLIGLTKVVALEGATHGVTVNA 180

Query: 188 IAPGVIRTSLSD-------AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           I PG + T L           R    +  + + L+   P  R    +E++    FL   A
Sbjct: 181 ICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240

Query: 241 ASYITGQVICVDGGMTVN 258
           A  +TGQ   VDGG T  
Sbjct: 241 AKGVTGQAWVVDGGWTAQ 258

Length = 258

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 2e-33
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG AI +  A  GA I     NQ  +++ L  ++  G++  G VCD++  + 
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDG 73

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + ++  +     G +++LVNNA +      L+ +AE    +   +  + F +SK   P 
Sbjct: 74  VQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPS 132

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G+G I+ I S+           Y    G +  LTK++  E  + NI+ N I PG I
Sbjct: 133 MIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYI 192

Query: 194 RTSLSDAIR---HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            T  +  +R    D +++   + ++++TP  R G+P++++    FL   A++++ G ++ 
Sbjct: 193 ATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILY 252

Query: 251 VDGGM 255
           VDGG+
Sbjct: 253 VDGGI 257

Length = 265

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 2e-33
 Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 31/264 (11%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSR 71
             +TGG+ GIG AIV+EL   GA +     +  +  +E  Q              D+SS 
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVP----------TDVSSA 61

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPK---EALDTTAEYMSTLR------STNFES 122
           E+    +  +   F G+++ LVNNA + +P+   +  D   +Y           + N + 
Sbjct: 62  EEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKG 120

Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           VF +S+     +    +G+IV +SS AG+  +     Y     A+N  T+    E  K N
Sbjct: 121 VFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHN 180

Query: 183 IRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGL------VSRTPICRPGEPDEVSSL 232
           IR   +APG++  +      ++ A    +   VE L       S  P+ R G+  EV+ L
Sbjct: 181 IRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADL 240

Query: 233 VAFLCFPAASYITGQVICVDGGMT 256
           V +L    ASYITG    + GG T
Sbjct: 241 VCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  124 bits (312), Expect = 2e-33
 Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 7/241 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   G+G  I   LA  GA I    R  +E +E  Q+ +  G +      DLS  E  
Sbjct: 10  VTGANTGLGQGIAVGLAEAGADIVGAGR--SEPSETQQQVEALGRRFLSLTADLSDIEAI 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL-AHPL 133
           + L+++    F G +++LVNNA +    +A + + +    + + N +SVF L++  A   
Sbjct: 68  KALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHF 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LK    G I+ I+S+         P Y     A+  LTK L  E A   I  N+IAPG +
Sbjct: 127 LKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNAIAPGYM 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T+ + A+R D  +N     ++ R P  R G PD++     FL   A+ Y+ G  + VDG
Sbjct: 187 ATNNTQALRADEDRN---AAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243

Query: 254 G 254
           G
Sbjct: 244 G 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  123 bits (311), Expect = 3e-33
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 24/260 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI  ELA  G  I        +   E + E    G +      D+     
Sbjct: 6   VTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGELSD 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPK--EALDTTAEYMSTLRSTNFESVFHLSK--- 128
            E L++     F G+L+ LVNNA +AV    + LD T +    L + N    F L++   
Sbjct: 66  HEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQAVA 124

Query: 129 ---LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDN 182
              +  P      +  I+F++S+     +P     G Y      ++  T+ L    A + 
Sbjct: 125 RRMVEQPDRFDGPHRSIIFVTSINAYLVSPNR---GEYCISKAGLSMATRLLAYRLADEG 181

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPICRPGEPDEVSSLVAFLCFPA 240
           I  + I PG+I T ++      P K K  + L++    PI R G+P++++  V  L    
Sbjct: 182 IAVHEIRPGLIHTDMTA-----PVKEKY-DELIAAGLVPIRRWGQPEDIAKAVRTLASGL 235

Query: 241 ASYITGQVICVDGGMTVNGF 260
             Y TGQ I +DGG+++   
Sbjct: 236 LPYSTGQPINIDGGLSMRRL 255

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 5e-33
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 20/256 (7%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TGG RGIG  I   LA  GF  +      +  EL    QE +  G++V     D++  
Sbjct: 6   LVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADL 64

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEA--LDTTAEYMSTLRSTNFESVFHLSK- 128
              E +++   + + G+++ LVNNA V V      LD T E    + + N    F L++ 
Sbjct: 65  SAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQA 123

Query: 129 -----LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
                LA P  +   +  IVF+SSV  +  +P    Y      ++   +      A++ I
Sbjct: 124 VAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGI 183

Query: 184 RANSIAPGVIRTSLSDAI--RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
               + PG+I+T ++  +  ++D     I +GLV   P+ R GEP++V+  VA L     
Sbjct: 184 GVYEVRPGLIKTDMTAPVTAKYD---ALIAKGLV---PMPRWGEPEDVARAVAALASGDL 237

Query: 242 SYITGQVICVDGGMTV 257
            Y TGQ I VDGG+++
Sbjct: 238 PYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  121 bits (306), Expect = 1e-32
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 13/248 (5%)

Query: 15  ITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSS 70
           +TG  RGIG AI  EL   G+  I    S N    +  E     + +       V D   
Sbjct: 7   VTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEE 66

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
             +    +E      +G +++LVNNA +         + +  + + +TN  SVF++++  
Sbjct: 67  CAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPL 122

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              +   G G I+ ISSV G+        Y      M   TK L  E A+  I  N IAP
Sbjct: 123 FAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAP 182

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T + + +  +     +++ +V++ P+ R G P+E+++ VAFL   AA +ITG+ I 
Sbjct: 183 GYIATPMVEQMGPE-----VLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETIS 237

Query: 251 VDGGMTVN 258
           ++GG+ ++
Sbjct: 238 INGGLYMH 245

Length = 245

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 3e-32
 Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 6/248 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG  +GIG  I    A  GA +     +  E+ +   E   +G + T  V D+     
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPAS 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
               ++       G++++LVNNA V      LD + E        N + V++++K   P 
Sbjct: 69  VAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127

Query: 134 LKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A  +G IV +SSV G + A P    Y     A+  LTK L  E A+  IR N+I PG 
Sbjct: 128 MIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGY 187

Query: 193 IRTSLSD--AIRHDPAK-NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           +RT +++  A + +P     ++  +    P+ R  +P EV  L AFL    +SY+TG   
Sbjct: 188 VRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQN 247

Query: 250 CVDGGMTV 257
            +DGG T+
Sbjct: 248 VIDGGSTL 255

Length = 263

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  120 bits (304), Expect = 4e-32
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 12/249 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIH-TCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +T    GIG A    LA  G  I  T   ++    E  +E +  G++      DLS   +
Sbjct: 7   VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPE 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
             + ++ +     G++++LVNNA        LD   +    + + + +  F  S++A   
Sbjct: 67  GAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++K    G I+ I+SV   T  P    Y     A+  LTK +  E  +  I  N++APG 
Sbjct: 126 MVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGA 185

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSR--TPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           I T ++     D           SR   P+ RPG+  E++SLVA+LC   ASY TGQ + 
Sbjct: 186 IATPMNGMDDSDVKP-------DSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLI 238

Query: 251 VDGGMTVNG 259
           VDGG  +  
Sbjct: 239 VDGGFMLAN 247

Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  120 bits (303), Expect = 5e-32
 Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 32/257 (12%)

Query: 15  ITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC----DL 68
           ITGG R IG AI   L  AG+   IH   R+  E +    E  L  L+  GS      DL
Sbjct: 11  ITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAE--LNALR-PGSAAALQADL 66

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
              +   +L+    + F G+L+ LVNNA+   P      T      L ++N ++ F LS+
Sbjct: 67  LDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQ 125

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
            A P L+    G IV I+ +      PL   P+Y     A+  LT+ L  E A + +R N
Sbjct: 126 AAAPQLRKQ-RGAIVNITDIHA--ERPLKGYPVYCAAKAALEMLTRSLALELAPE-VRVN 181

Query: 187 SIAPGVI-----RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           ++APG I       S  +  R         + +++RTP+ R G P++++  V FL    A
Sbjct: 182 AVAPGAILWPEDGNSFDEEAR---------QAILARTPLKRIGTPEDIAEAVRFLLA-DA 231

Query: 242 SYITGQVICVDGGMTVN 258
           S+ITGQ++ VDGG ++ 
Sbjct: 232 SFITGQILAVDGGRSLT 248

Length = 249

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  120 bits (303), Expect = 5e-32
 Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSR 71
           +TGG+RGIG  I +     GA +   +R      +  E L  +     +      DLSS 
Sbjct: 11  VTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG----ECIAIPADLSSE 66

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  E L+  V+     +L++LVNNA                  +   N +SVF L++   
Sbjct: 67  EGIEALVARVAERSD-RLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALL 125

Query: 132 PLLKASGN----GIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRAN 186
           PLL+A+        ++ I S+AG+  + L    YG    A++QLT+ L  E A ++I  N
Sbjct: 126 PLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHITVN 185

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +IAPG   + ++  + +DPA  +  E  +   P+ R G P++++ L   L   A +Y+TG
Sbjct: 186 AIAPGRFPSKMTAFLLNDPAALEAEEKSI---PLGRWGRPEDMAGLAIMLASRAGAYLTG 242

Query: 247 QVICVDGG 254
            VI VDGG
Sbjct: 243 AVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 6e-32
 Identities = 76/249 (30%), Positives = 110/249 (44%), Gaps = 13/249 (5%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSR 71
             +TG   GIG A  E LA  GA +     N  E  ER+ ++    G        D+S  
Sbjct: 9   AIVTGAAGGIGQAYAEALAREGASVVVADINA-EGAERVAKQIVADGGTAIAVQVDVSDP 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAV---AVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           +  + + +   S F G ++ LVNNAA+         +    +Y     S N +     ++
Sbjct: 68  DSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTR 126

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
             +  +   G G IV  SS A   A   +  YG     +N LT+ L  E    NIR N+I
Sbjct: 127 AVYKHMAKRGGGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAI 183

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG I T   +A R    K   V  +V   P+ R G P+++  +  FL    AS+ITGQ+
Sbjct: 184 APGPIDT---EATRTVTPKE-FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQI 239

Query: 249 ICVDGGMTV 257
             VDGG  +
Sbjct: 240 FNVDGGQII 248

Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  119 bits (301), Expect = 8e-32
 Identities = 79/243 (32%), Positives = 109/243 (44%), Gaps = 7/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A    LA  GA +     +       + +     L +     D++  +Q 
Sbjct: 8   VTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR---VDVTDEQQV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             L E     F G L+LLVNNA       A+ DT         + N    F   + A P 
Sbjct: 65  AALFERAVEEF-GGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPR 123

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           + A G G IV +SS+AG +  P    YG    A+  LT+ L  E     IR N++APG+I
Sbjct: 124 MIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLI 183

Query: 194 RTSLSDAIRH--DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            T L  A     + A       L+      R G P++V++ V FL    AS+ITGQV+CV
Sbjct: 184 DTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFITGQVLCV 243

Query: 252 DGG 254
           DGG
Sbjct: 244 DGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  118 bits (296), Expect = 5e-31
 Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 17/254 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T GIG AI   L   G  +  C+R +  L   ++E +  G++  G  CD+ S  +
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVPE 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK--LAH 131
            E L+    + + G +++LVNNA  +      +   E    +  TN   VF ++K  L  
Sbjct: 67  IEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLKA 125

Query: 132 PLLKASGNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
             +   G G I+ I+S  G    V AAP    Y      +   TK L  E A+  I  N+
Sbjct: 126 GGMLERGTGRIINIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGITVNA 181

Query: 188 IAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           + PG + T ++ ++R       + +  +  + + +R P+ R   P+EV+ +VA+L    A
Sbjct: 182 VCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGA 241

Query: 242 SYITGQVICVDGGM 255
           + +T Q + V GG+
Sbjct: 242 AAVTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  118 bits (297), Expect = 6e-31
 Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 23/252 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A    LA  GA +         ++E + + K  G K      D+S  +Q 
Sbjct: 11  ITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQV 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV--------AVPKEALDTTAEYMST-LRSTNFESVFH 125
           +     +   F G++++L NNA V          P +  D   + M+  +R T     F 
Sbjct: 70  KDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFD---KIMAVDMRGT-----FL 120

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           ++K+  PL+   G G I+  SS +G  A      Y    GA+   TK +  E  +D IRA
Sbjct: 121 MTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRA 179

Query: 186 NSIAPGVIRTSLSDAI---RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           N+IAPG I T L D +     D A     E     TP+ R G+P+EV+ LV FL    +S
Sbjct: 180 NAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS 239

Query: 243 YITGQVICVDGG 254
           +ITG+ I +DGG
Sbjct: 240 FITGETIRIDGG 251

Length = 272

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  118 bits (297), Expect = 6e-31
 Identities = 76/262 (29%), Positives = 116/262 (44%), Gaps = 28/262 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGGT  +G A+   LA  GA +    RNQ + ++  +E    G +      D+  R   
Sbjct: 10  ITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDRASL 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS------TNFESVFHL-- 126
           E+  E + + F G +++L+N A    P    D       T ++        +E VF L  
Sbjct: 70  ERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFDLNL 128

Query: 127 -------SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
                        +L+  G  II  ISS+   +     P Y     A++  T+ L  E A
Sbjct: 129 NGSFLPSQVFGKDMLEQKGGSIIN-ISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFA 187

Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLV 233
              +R N+IAPG   T  +  +  +P        NKI    + RTP+ R G+P+E+   +
Sbjct: 188 TTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKI----LGRTPMGRFGKPEELLGAL 243

Query: 234 AFLC-FPAASYITGQVICVDGG 254
            FL    A+S++TG VI VDGG
Sbjct: 244 LFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-30
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 23/253 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-------TELNERLQEWKLKGLKVTGSVCD 67
           +TGG   IG A+   L   GA +     +          L ER +              D
Sbjct: 11  VTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIA----------TD 60

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           ++     E+ + TV + F G++++LVN A   +      + A++++ L   N  S   L+
Sbjct: 61  ITDDAAIERAVATVVARF-GRVDILVNLACTYLDDGLASSRADWLAAL-DVNLVSAAMLA 118

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           + AHP L   G G IV  +S++   A     LY     A+ QLT+ +  + A D IR NS
Sbjct: 119 QAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNS 177

Query: 188 IAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++PG   + + D +   D AK   V        + R G+P+EV+ +VAFLC  AAS++TG
Sbjct: 178 VSPGWTWSRVMDELSGGDRAKADRVAAPFH--LLGRVGDPEEVAQVVAFLCSDAASFVTG 235

Query: 247 QVICVDGGMTVNG 259
               VDGG +  G
Sbjct: 236 ADYAVDGGYSALG 248

Length = 261

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  116 bits (292), Expect = 1e-30
 Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 15/246 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLSSREQ 73
           +TG  +GIG A V+ LA  GA +   SR Q +L+  ++E    G++    VC DLS  + 
Sbjct: 12  VTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLSDWDA 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+ + +V     G ++LLVNNAAVA+ +  L+ T E        N  +V H+S++    
Sbjct: 67  TEEALGSV-----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARG 121

Query: 134 LKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A G  G IV +SS A   A     +Y     A++ LTK +  E     IR NS+ P V
Sbjct: 122 MIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNPTV 181

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T +      DP K K    +++R P+ +  E ++V + + FL    +S  TG  + VD
Sbjct: 182 VMTDMGRDNWSDPEKAK---KMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGSTLPVD 238

Query: 253 GGMTVN 258
           GG   +
Sbjct: 239 GGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 5e-30
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 4/243 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG ++GIG+A+ E LA  GA +    R+  +L    +  K +GL       D++  +  
Sbjct: 15  VTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAV 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              ++   +   G +++LVNNA +       D  A+    L  TN  SVF++ +     +
Sbjct: 75  RAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHM 133

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
            A G G I+ I+SV    A P    Y    GA+  LTK +  + AK  ++ N+IAPG   
Sbjct: 134 IARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFD 193

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T L+ A+  DP  +  +E    RTP  R G+ +E+     FL   A+S++ G V+ VDGG
Sbjct: 194 TPLNAALVADPEFSAWLE---KRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGG 250

Query: 255 MTV 257
           +T 
Sbjct: 251 ITA 253

Length = 255

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 1e-29
 Identities = 84/262 (32%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSRE 72
           ITG ++GIG A  E  A  G  +H  +R+   L E L        G+ V     DLSS E
Sbjct: 12  ITGASKGIGAAAAEAFAAEGCHLHLVARDADAL-EALAADLRAAHGVDVAVHALDLSSPE 70

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-SVF---HLSK 128
            RE+L      I     ++LVNNA  A+P   LD      +  R   +E  VF    L++
Sbjct: 71  AREQLAAEAGDI-----DILVNNAG-AIPGGGLDDVD--DAAWR-AGWELKVFGYIDLTR 121

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY------NGAMNQLTKHLECEQAKDN 182
           LA+P +KA G+G+IV +   AG       P    Y      N A+   T+ L  +   D 
Sbjct: 122 LAYPRMKARGSGVIVNVIGAAGEN-----PDAD-YICGSAGNAALMAFTRALGGKSLDDG 175

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEG-----LVSRTPICRPGEPDEVSSLVAFLC 237
           +R   + PG + T     +    A+ ++ +      L++  P+ RP  P+EV+ LVAFL 
Sbjct: 176 VRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA 235

Query: 238 FPAASYITGQVICVDGGMTVNG 259
            P + Y +G V+ VDGG++  G
Sbjct: 236 SPRSGYTSGTVVTVDGGISARG 257

Length = 259

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  114 bits (286), Expect = 2e-29
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 10/253 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG AI + L   G  +     N+        +    G K      D+S R+Q
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQ 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDT-TAEYMSTLRSTNFESVFHLSKLAHP 132
               +  V   F G LN++VNNA VA P   ++T T E    + + N   V    + A  
Sbjct: 66  VFAAVRQVVDTF-GDLNVVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123

Query: 133 LLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             K  G+G  I+  +S AGV   P   +Y     A+  LT+    + A + I  N+ APG
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183

Query: 192 VIRTSLSDAIRHDPAKNK------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +++T +   I H   +N        +E       + R  EP++V++ V+FL  P + YIT
Sbjct: 184 IVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYIT 243

Query: 246 GQVICVDGGMTVN 258
           GQ I VDGGM  +
Sbjct: 244 GQTIIVDGGMVFH 256

Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  113 bits (284), Expect = 2e-29
 Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 7/243 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TGG  GIG AI + LA  G  +   C  N+      LQE    G        D+SS E
Sbjct: 4   LVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFE 63

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             +  +  V +   G +++LVNNA +         T E  S +  TN  SVF++++    
Sbjct: 64  SCKAAVAKVEAE-LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVID 122

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++  G G I+ ISSV G         Y      M   TK L  E A   +  N+I+PG 
Sbjct: 123 GMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGY 182

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T +  A+R D   N IV  +    P+ R G P+E+++ VAFL    A YITG  + ++
Sbjct: 183 IATDMVMAMRED-VLNSIVAQI----PVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN 237

Query: 253 GGM 255
           GG+
Sbjct: 238 GGL 240

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  113 bits (284), Expect = 3e-29
 Identities = 75/251 (29%), Positives = 109/251 (43%), Gaps = 10/251 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSRE 72
           +TG T GIG  I   LA  GA I           E ++       G+KV     DLS   
Sbjct: 7   VTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKPA 66

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E ++      F G +++LVNNA +       D   E    + + N  +VFH ++LA P
Sbjct: 67  AIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLALP 125

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +K  G G I+ I+SV G+ A+     Y      +  LTK +  E A   +  N+I PG 
Sbjct: 126 HMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAICPGW 185

Query: 193 IRTSLSDAIRHDPAKNK-------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           + T L +      A+           E L+ + P  +   P+++     FL   AAS IT
Sbjct: 186 VLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASDAASQIT 245

Query: 246 GQVICVDGGMT 256
           G  + VDGG T
Sbjct: 246 GTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 3e-29
 Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 18/242 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  G+G A    LA  GA +    R    L++ L       L++ G   DL   + 
Sbjct: 11  AITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--IDLVDPQA 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             + ++ V+  F G+L+ LVN A   V     D  A+    +   N ++  + SK A P 
Sbjct: 69  ARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPA 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L ASG G IV I + A + A P    Y      + +LT+ L  E     I  N++ P +I
Sbjct: 128 LTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSII 187

Query: 194 RTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T      R D P  +             R   P+++++++AFL    A  ITG  I VD
Sbjct: 188 DT---PPNRADMPDAD-----------FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVD 233

Query: 253 GG 254
           GG
Sbjct: 234 GG 235

Length = 239

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  113 bits (284), Expect = 5e-29
 Identities = 85/248 (34%), Positives = 125/248 (50%), Gaps = 12/248 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           ITGG  GIG A+    A  GA   I+     + +  E  +  + +G K      DL    
Sbjct: 31  ITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLGDES 90

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLA 130
               L++ V   F GKL++LVNNAA   P+E+++  TT +   T R TN  S+F+L+K A
Sbjct: 91  FCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFR-TNIFSMFYLTKAA 148

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P LK   +  I+  +SV     +P    Y    GA+   T+ L  + A+  IR N++AP
Sbjct: 149 LPHLKKGSS--IINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAP 206

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T L  +    P +   V    S+ P+ R G+P EV+    FL    +SY+TGQV+ 
Sbjct: 207 GPIWTPLIPS--SFPEEK--VSEFGSQVPMGRAGQPAEVAPAYVFLASQDSSYVTGQVLH 262

Query: 251 VDGGMTVN 258
           V+GG  +N
Sbjct: 263 VNGGEIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (280), Expect = 9e-29
 Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 12/248 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG  RGIG AI   LA  G+ ++    +   E+NE L+  K  G +  G + D+S+RE 
Sbjct: 11  VTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREG 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L +     + G  ++LVNNA + +    L+   + +    ST+F+SV + S+     
Sbjct: 71  CETLAKATIDRY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKE 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G   IV I+SVAG+  A    +YG    A+  LTK+L  E A   IR N+IAPG +
Sbjct: 130 MREGGA--IVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFV 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSR--TPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           +T L +++        + E   +   T + +  +P+EV+  VA +       ITGQV  +
Sbjct: 187 KTKLGESL---FKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAIL--KIESITGQVFVL 241

Query: 252 DGGMTVNG 259
           D G ++ G
Sbjct: 242 DSGESLKG 249

Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 1e-28
 Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 14/248 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLS 69
           ITGG+ G+G A+        A  +I+  S ++ E N+  +E K  G   + V G   D++
Sbjct: 12  ITGGSTGLGRAMAVRFGKEKAKVVINYRS-DEEEANDVAEEIKKAGGEAIAVKG---DVT 67

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
                  L++T    F G L++++NNA +     + + + E  + + +TN    F  S+ 
Sbjct: 68  VESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSRE 126

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
           A    ++    G I+ +SSV      PL   Y    G +  +T+ L  E A   IR N+I
Sbjct: 127 AIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNI 186

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG I T ++     DP +   VE ++   P+   G+P+E++++ A+L    ASY+TG  
Sbjct: 187 GPGAINTPINAEKFADPKQRADVESMI---PMGYIGKPEEIAAVAAWLASSEASYVTGIT 243

Query: 249 ICVDGGMT 256
           +  DGGMT
Sbjct: 244 LFADGGMT 251

Length = 261

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  111 bits (280), Expect = 1e-28
 Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 23/256 (8%)

Query: 10  EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
           ++   +TGG++GIG A+V  L   G+ +      +           +   K      D+S
Sbjct: 6   DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------YNDVDYFK-----VDVS 54

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
           ++EQ  K ++ V S + G++++LVNNA +           +    + + N   +F +SK 
Sbjct: 55  NKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKY 113

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P +     G+I+ I+SV           Y     A+  LT+ +  + A   IR  ++ 
Sbjct: 114 TIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVAVC 172

Query: 190 PGVIRTSLSD-----AIRHDPAK--NKIVE-GLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           PG IRT L +      +  DP     KI E G     P+ R G+P+EV+ +VAFL    A
Sbjct: 173 PGSIRTPLLEWAAELEVGKDPEHVERKIREWG--EMHPMKRVGKPEEVAYVVAFLASDLA 230

Query: 242 SYITGQVICVDGGMTV 257
           S+ITG+ + VDGG+  
Sbjct: 231 SFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 1e-28
 Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 20/249 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TGG  GIGHAI E  A  GA +    R++   E+  +L     KGL     VCD+S  +
Sbjct: 20  VTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGL-----VCDVSDSQ 74

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E  +  V S F G++++LVN+A VA+   A D + E        N +  F +++    
Sbjct: 75  SVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR 133

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            + A+G G IV ++S AGV A      Y      +  +TK L  E     I  N+I+P V
Sbjct: 134 HMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTV 193

Query: 193 IRTSLS----DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           + T L        + + AK  I        P  R   P+E+++   FL   AA+ ITG+ 
Sbjct: 194 VLTELGKKAWAGEKGERAKKLI--------PAGRFAYPEEIAAAALFLASDAAAMITGEN 245

Query: 249 ICVDGGMTV 257
           + +DGG T+
Sbjct: 246 LVIDGGYTI 254

Length = 255

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  116 bits (294), Expect = 1e-28
 Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 12/251 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG A  + LA  GA +     ++        E      +  G  CD++    
Sbjct: 426 LVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACDVTDEAA 484

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +   E  +  F G ++++V+NA +A+     +T+ E        N    F +++ A  +
Sbjct: 485 VQAAFEEAALAF-GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI 543

Query: 134 LKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP-G 191
           +KA G G  IVFI+S   V   P    YG    A   L + L  E   D IR N + P  
Sbjct: 544 MKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDA 603

Query: 192 VIRTS--LSDAIRHDPAK-NKI-VEGL----VSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           V+R S   +       A    +  E L     +R  + R   P++V+  V FL     S 
Sbjct: 604 VVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSK 663

Query: 244 ITGQVICVDGG 254
            TG +I VDGG
Sbjct: 664 TTGAIITVDGG 674

Length = 681

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  110 bits (277), Expect = 2e-28
 Identities = 70/246 (28%), Positives = 108/246 (43%), Gaps = 8/246 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG AI + LA  GA +     +  E+ E++ E    G +  G  CD++S  Q 
Sbjct: 6   VTGGASGIGLAIAKRLAAEGAAVVVADID-PEIAEKVAEAAQGGPRALGVQCDVTSEAQV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +   E     F G L+++V+NA +A      +T+ E  +     N    F +S+ A  ++
Sbjct: 65  QSAFEQAVLEF-GGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFRIM 123

Query: 135 KASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP-GV 192
           K+ G  G IVF +S   V   P    Y     A   L + L  E  +D IR N++ P  V
Sbjct: 124 KSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNPDAV 183

Query: 193 IRTSLSD----AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            R S             A   + E   +R  + R   P++V+  V  +        TG +
Sbjct: 184 FRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFGKTTGAI 243

Query: 249 ICVDGG 254
           + VDGG
Sbjct: 244 VTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  109 bits (275), Expect = 4e-28
 Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 22/255 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQ--------TELNERLQE---WKLKGLKVT 62
           FITG   G+G AI   +A  GA +     N          E+N    E   +        
Sbjct: 3   FITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF-------- 54

Query: 63  GSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFES 122
            +V D++   Q + L+   +    G L++LVNNA V           +    + + N ES
Sbjct: 55  AAVQDVTDEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVES 113

Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAK 180
           +F   K A P L+AS    IV ISSVA   A P    Y     A+  LTK   L+C +  
Sbjct: 114 IFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRG 173

Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
            ++R NSI P  IRT + D I     + +    L    P+ R GEPD+V+  V +L    
Sbjct: 174 LDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDE 233

Query: 241 ASYITGQVICVDGGM 255
           + ++TG  + +DGG+
Sbjct: 234 SRFVTGAELVIDGGI 248

Length = 251

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 5e-28
 Identities = 77/249 (30%), Positives = 115/249 (46%), Gaps = 16/249 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG AI   LA  GAI     R+  + +E  +E +    +      DL+   Q 
Sbjct: 12  VTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVDLTDDAQC 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              +E   + F G+++ LVNNA V   V  EA      ++++L   N    + ++    P
Sbjct: 71  RDAVEQTVAKF-GRIDGLVNNAGVNDGVGLEA--GREAFVASLER-NLIHYYVMAHYCLP 126

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            LKAS  G IV ISS   +T    T  Y    GA   LT+      AKD +R N++ P  
Sbjct: 127 HLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAE 185

Query: 193 IRTSLSD---AIRHDP-AKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCFPAASYITGQ 247
           + T L +   A   DP AK   +  + ++ P+  R    +E++    FL    +S+ TGQ
Sbjct: 186 VMTPLYENWIATFDDPEAK---LAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQ 242

Query: 248 VICVDGGMT 256
            + VDGG  
Sbjct: 243 WLFVDGGYV 251

Length = 258

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  109 bits (276), Expect = 6e-28
 Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 36/260 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGGT+GIG A V  L   GA + T +R++ +              V     DL++ E  
Sbjct: 14  VTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPE---------GVEFVAADLTTAEGC 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPK----EALDTTAEYMSTLRSTNFESVFHLSKLA 130
             +   V     G +++LV+    +        AL T  E+   L + N  +   L +  
Sbjct: 65  AAVARAVLERL-GGVDILVHVLGGSSAPAGGFAAL-TDEEWQDEL-NLNLLAAVRLDRAL 121

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG------AMNQLTKHLECEQAKDNIR 184
            P + A G+G+I+ ++S+         PL            A++  +K L  E A   +R
Sbjct: 122 LPGMIARGSGVIIHVTSIQRRL-----PLPESTTAYAAAKAALSTYSKSLSKEVAPKGVR 176

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKN---------KIVEGLVSRTPICRPGEPDEVSSLVAF 235
            N+++PG I T  + A+    A+          +I+   +   P+ RP EP+EV+ L+AF
Sbjct: 177 VNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAF 236

Query: 236 LCFPAASYITGQVICVDGGM 255
           L    A+ ITG    +DGG 
Sbjct: 237 LASDRAASITGTEYVIDGGT 256

Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  109 bits (274), Expect = 6e-28
 Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 26/256 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSRE 72
            ITG    IG A  + L   GA +     N   L +  +E   L   +V     D++S+E
Sbjct: 6   LITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITSKE 65

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL----DTTAEYMSTLRSTNFESVFHLSK 128
             ++L+E+    F G++++L+NNA    PK       +   E  + + + N    F  S+
Sbjct: 66  SIKELIESYLEKF-GRIDILINNAYP-SPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCSQ 123

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAA---------PLTPL-YGPYNGAMNQLTKHLECEQ 178
               L K  G G I+ I+S+ GV A            +P+ Y      +  LTK+L    
Sbjct: 124 AFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYY 183

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           A   IR N+I+PG I          +   ++ +E    + P+ R   P+++   + FL  
Sbjct: 184 ADTGIRVNAISPGGI---------LNNQPSEFLEKYTKKCPLKRMLNPEDLRGAIIFLLS 234

Query: 239 PAASYITGQVICVDGG 254
            A+SY+TGQ + +DGG
Sbjct: 235 DASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  109 bits (273), Expect = 8e-28
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG  + E LAG GA +    R++  ++E L E    G        DL +    
Sbjct: 9   VTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTADLETYAGA 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAHP 132
           + ++      F G++++L+NN    +  +  +     +  + +R + F +++   +   P
Sbjct: 68  QGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLW-CCRAVLP 125

Query: 133 LLKASGNGIIVFISSVA--GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            +     G+IV +SS+A  G+   P    Y    G +N LT  L  E A+D IR N++AP
Sbjct: 126 HMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIRVNAVAP 181

Query: 191 GVIRTSLSDAIRH-DPAKN-------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           G          R+  P          +IV+  +  + + R G  DE    + FL    AS
Sbjct: 182 GGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLASDEAS 241

Query: 243 YITGQVICVDGG 254
           YITG V+ V GG
Sbjct: 242 YITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  108 bits (270), Expect = 2e-27
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 8/242 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSREQ 73
           +TGG +GIG AI   LA  GA +     +  E  E L  E   +G  V     D+S  E 
Sbjct: 11  VTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVED 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L+E   + F GK+++LVNNA +   +       E    +   N  SVF+ +    P 
Sbjct: 71  ANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +  +  G I+ ISS+ G         Y      M   TK L  E AK N+  N+I PG I
Sbjct: 130 ITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFI 189

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T +   +  +     + + +V++ P  R G+ DE++  V +LC   A YITGQ + ++G
Sbjct: 190 DTEMVAEVPEE-----VRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQQLNING 243

Query: 254 GM 255
           G+
Sbjct: 244 GL 245

Length = 247

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  107 bits (269), Expect = 4e-27
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG A+   LA  G  +   +RN  +L E L E     L+V     D++  E 
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKL-ESLGELLNDNLEVL--ELDVTDEES 60

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++ V   F G++++LVNNA   +     +T+ E +  L   N      +++   PL
Sbjct: 61  IKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPL 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIAP 190
           ++  G+G IV +SSVAG+     TP  GPY     A+  L++ L  E A   I+   I P
Sbjct: 120 MRKQGSGRIVNVSSVAGLVP---TPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 191 GVIRTSLSDAIRH 203
           G +RT  +D    
Sbjct: 177 GPVRTGFADNAAG 189

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 4e-27
 Identities = 80/255 (31%), Positives = 120/255 (47%), Gaps = 21/255 (8%)

Query: 10  EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV---- 65
           ++ Y +TGG  GIG  +   L   GA +    RN  +L    +E  ++ LK  G+V    
Sbjct: 7   DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEE--IEALKGAGAVRYEP 64

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAA---VAVPKEALDTTAEYMSTLRST---N 119
            D++  +Q  + ++  ++ + G+L+ +V+ A       P   +D+ A      R T   N
Sbjct: 65  ADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDA-----WRRTVDLN 118

Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
                ++ K A   L   G G  V ISS+A          YG    A++ L K    E  
Sbjct: 119 VNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG 178

Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
              +R NSI PG+IRT L   I   P    +     + TP+ R GE ++V++L  FL   
Sbjct: 179 PSWVRVNSIRPGLIRTDLVAPITESPE---LSADYRACTPLPRVGEVEDVANLAMFLLSD 235

Query: 240 AASYITGQVICVDGG 254
           AAS+ITGQVI VDGG
Sbjct: 236 AASWITGQVINVDGG 250

Length = 276

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  106 bits (268), Expect = 7e-27
 Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 22/244 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           ITG + GIG  + ++LA  G  +   +R + +L    +E + K G++V     DLS  E 
Sbjct: 11  ITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEA 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+L + +     G +++LVNNA        L+ + +    +   N  ++  L+K   P 
Sbjct: 71  LERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPG 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G G I+ I S AG+   P   +Y      +   ++ L  E     ++  ++ PG  
Sbjct: 130 MVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPT 189

Query: 194 RTSLSDAIRHDPAKN-----------------KIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           RT   DA     +                     ++ L        PG P++  +L   L
Sbjct: 190 RTEFFDA---KGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIPGLPNKALALSFRL 246

Query: 237 CFPA 240
              +
Sbjct: 247 LPRS 250

Length = 265

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  106 bits (266), Expect = 8e-27
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 12/245 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           IT   +GIG AI    A  GA +       T++NE   +   +G  +T  V D++ +EQ 
Sbjct: 7   ITAAAQGIGRAIALAFAREGANVIA-----TDINEEKLKELERGPGITTRVLDVTDKEQV 61

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L +       G++++L N A        LD   +      + N  S++ + K   P +
Sbjct: 62  AALAKEE-----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKM 116

Query: 135 KASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            A  +G I+ +SSVA  +   P   +Y     A+  LTK +  + A+  IR N+I PG +
Sbjct: 117 LARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGTV 176

Query: 194 RT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T SL + I+  P   + ++   +R P+ R   P+EV++L  +L    ++Y+TG  + +D
Sbjct: 177 DTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTGTAVVID 236

Query: 253 GGMTV 257
           GG ++
Sbjct: 237 GGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (267), Expect = 8e-27
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 31/257 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG +G+G A+ E LA  GA +     NQ +L E + E    G +V G   +++  E  
Sbjct: 10  ITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDV 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAA-------VAVPKEALDTT---AEYMSTLRSTNFESVF 124
           E     ++  F G+LN L+NNA        V      + +     ++ S +   N   VF
Sbjct: 70  EATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVI-DVNLTGVF 127

Query: 125 HLSKLAHPLLKASGN-GIIVFISSVA-----GVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
              + A   +  SG+ G+I+ ISS+A     G T       Y      +  +T     E 
Sbjct: 128 LCGREAAAKMIESGSKGVIINISSIARAGNMGQTN------YSASKAGVAAMTVTWAKEL 181

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           A+  IR  +IAPGVI T ++ A+     K + +E L    P+ R GEP+E++  V F+  
Sbjct: 182 ARYGIRVAAIAPGVIETEMTAAM-----KPEALERLEKMIPVGRLGEPEEIAHTVRFII- 235

Query: 239 PAASYITGQVICVDGGM 255
               Y+TG+V+ +DGG+
Sbjct: 236 -ENDYVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  107 bits (269), Expect = 8e-27
 Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 33/265 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG   +G A+ +ELA  GA +    RNQ +    + E K  G +      D+  +E  
Sbjct: 15  ITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESL 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMST-------LRSTNFESVFHLS 127
           E+  + +   F G  ++L+N A    PK   D     +         L    FE VF L+
Sbjct: 75  EQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLN 133

Query: 128 KL---------AHPLLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLEC 176
            L         A  ++   G G I+ ISS+   T  PLT  P Y     A++  T+ L  
Sbjct: 134 LLGTLLPTQVFAKDMVGRKG-GNIINISSMNAFT--PLTKVPAYSAAKAAISNFTQWLAV 190

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVS 230
             AK  IR N+IAPG   T  + A+  +         NKI    ++ TP+ R G+P+E+ 
Sbjct: 191 HFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKI----LAHTPMGRFGKPEELL 246

Query: 231 SLVAFLCFP-AASYITGQVICVDGG 254
             + +L    A+S++TG V+ VDGG
Sbjct: 247 GTLLWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  105 bits (265), Expect = 1e-26
 Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 11/224 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK--LKGLKVTGSVCDLSSR 71
            ITG + GIG A    LA  GA +   +R +    ERL+     +          D++ R
Sbjct: 10  LITGASSGIGEATARALAEAGAKVVLAARRE----ERLEALADEIGAGAALALALDVTDR 65

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
              E  +E +   F G++++LVNNA +A+     +   +    +  TN + + + ++   
Sbjct: 66  AAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVL 124

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +    +G I+ + S+AG    P   +YG    A+   +  L  E A   IR   I+PG
Sbjct: 125 PGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPG 184

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           ++ T+    +R +    +  +     T +     P++++  V F
Sbjct: 185 LVETTEFSTVRFEGDDERADKVYKGGTAL----TPEDIAEAVLF 224

Length = 246

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  106 bits (265), Expect = 1e-26
 Identities = 71/258 (27%), Positives = 109/258 (42%), Gaps = 18/258 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII-------------HTCSRNQTELNERLQEWKLKGLK 60
           FITG  RG G A    LA  GA I                   + +L+E  +  +  G K
Sbjct: 7   FITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGRK 66

Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNF 120
           V     D+    +   ++E     F G+L+++V NA V     + + + E   T+   N 
Sbjct: 67  VLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDTVLDINL 125

Query: 121 ESVFHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
             V+   K   P +++    G I+  SSVAG+ A P    Y      +  LTK L  E A
Sbjct: 126 TGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANELA 185

Query: 180 KDNIRANSIAPGVIRTSL--SDAIRHDPAKN-KIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           +  IR NSI P  + T +   +A+R    K  +     +   P+     P++V+  V +L
Sbjct: 186 EYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVADAVLWL 245

Query: 237 CFPAASYITGQVICVDGG 254
               + YITG  + VD G
Sbjct: 246 ASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  105 bits (263), Expect = 2e-26
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 25/250 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII--HTCSRNQ-----TELNERLQEWKLKGLKVTGSVC 66
            +TG + GIG  I   L   GAI+  H     +      EL ER++ +            
Sbjct: 10  LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFP----------A 59

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           +LS R++ + L +   +  +G +++LVNNA +      +  + E   ++   N  + F L
Sbjct: 60  NLSDRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRL 118

Query: 127 SK-LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           ++ L HP+++    G I+ I+SV GVT  P    Y      M   +K L  E A  N+  
Sbjct: 119 TRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTV 177

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N +APG I ++++  +     K K  E ++   P+ R G   EV+S VA+L    A+Y+T
Sbjct: 178 NCVAPGFIESAMTGKLND---KQK--EAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVT 232

Query: 246 GQVICVDGGM 255
           GQ I V+GGM
Sbjct: 233 GQTIHVNGGM 242

Length = 245

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  105 bits (263), Expect = 2e-26
 Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 22/249 (8%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLS 69
           +   ITG   GIG A        GA ++   +  + +L+      +L          DLS
Sbjct: 6   KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQL----------DLS 55

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSK 128
             +  E L + V S+     ++L N A +    K  LDT+ E    +  TN  S F L++
Sbjct: 56  --DDLEPLFDWVPSV-----DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTR 108

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
              P +    +GII+ + S+A   A      Y     A+   TK L  + AKD I+   I
Sbjct: 109 AYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGI 168

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG ++T ++ A   D     + + +   TPI R  EP+EV+ L  FL    A Y+ G +
Sbjct: 169 APGAVKTPMTAA---DFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTI 225

Query: 249 ICVDGGMTV 257
           + +DGG T+
Sbjct: 226 VPIDGGWTL 234

Length = 235

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 2e-26
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI   LA  G A+    + +    +E + E +  G +      D++   
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAA 68

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              +L +   + F G++++LVNNA V       D   E      +TN    F + + A  
Sbjct: 69  AVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR 127

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSIA 189
            L   G  II   +SV  +      P YGPY     A+  L   L  E     I  N++A
Sbjct: 128 HLGQGGR-IINLSTSVIAL----PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVA 182

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG + T L      +    + ++ L    P+ R G P+E+++ VAFL  P  +++ GQV+
Sbjct: 183 PGPVATELF----FNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVL 238

Query: 250 CVDGGM 255
            V+GG 
Sbjct: 239 RVNGGF 244

Length = 245

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 3e-26
 Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 8/243 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A+       G  +     +   L        L   +     CDL+     
Sbjct: 7   VTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD--ALGDARFVPVACDLTDAASL 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              +   ++   G +++LV NA  A      DTT        + N E+ +   +     +
Sbjct: 65  AAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGM 123

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
                G +V I SV G+ A    P Y      +   TK L  E  +  IRAN++APG ++
Sbjct: 124 LKRSRGAVVNIGSVNGMAALG-HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVK 182

Query: 195 TSLSDAIRHDPAKNKIV-EGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T   +A     A N  V E L    P+     PD+V++ V FL  PAA  ITG  + VDG
Sbjct: 183 TQAWEA---RVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDG 239

Query: 254 GMT 256
           G+T
Sbjct: 240 GLT 242

Length = 257

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 3e-26
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 34/258 (13%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           N  + GGT GI   I +  A  GA +   SR+Q +++  + + +  G +  G   D+   
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV-------- 123
              E     ++  F G +++LV+ AA   P  A       MS   +  F++V        
Sbjct: 71  AAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAG-----MS---ANGFKTVVDIDLLGT 121

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
           F++ K A+PLL+  G   I+ IS+       P+          ++ LT+ L  E   + I
Sbjct: 122 FNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGI 180

Query: 184 RANSIAPGVI-------RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           R NSI PG I       R + S  ++           +    P+ R G   ++++   FL
Sbjct: 181 RVNSIVPGPIAGTEGMARLAPSPELQ---------AAVAQSVPLKRNGTKQDIANAALFL 231

Query: 237 CFPAASYITGQVICVDGG 254
               ASYITG V+ VDGG
Sbjct: 232 ASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 3e-26
 Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 11/189 (5%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG  RGIG  IV +LA  G G +I T  R+       +++ + +GL V     D++  
Sbjct: 4   LVTGANRGIGFEIVRQLAKSGPGTVILTA-RDVERGQAAVEKLRAEGLSVRFHQLDVTDD 62

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDT--TAEYMSTLRSTNFESVFHLSKL 129
              E   + V   + G L++LVNNA +A  K   D+  T E       TNF     +++ 
Sbjct: 63  ASIEAAADFVEEKY-GGLDILVNNAGIA-FKGFDDSTPTREQARETMKTNFFGTVDVTQA 120

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             PLLK S  G IV +SS  G     LT  YG    A+N LT+ L  E  +  I+ N+  
Sbjct: 121 LLPLLKKSPAGRIVNVSSGLGS----LTSAYGVSKAALNALTRILAKELKETGIKVNACC 176

Query: 190 PGVIRTSLS 198
           PG ++T + 
Sbjct: 177 PGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score =  104 bits (261), Expect = 4e-26
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 17/248 (6%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLS 69
            +TG +RGIG AI   LA  GF   +H     +++    +    ++       +   D++
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSA--IQAQGGNARLLQFDVA 58

Query: 70  SREQ-REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH-LS 127
            R   R  L   ++    G    +V NA +         + E    +  TN +  ++ + 
Sbjct: 59  DRVACRTLLEADIAE--HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIH 116

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
               P+++A   G I+ ++SV+GV        Y      +   TK L  E AK  I  N 
Sbjct: 117 PCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNC 176

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           IAPG+I T +   + HD     + E L    P+ R G+P EV+SL  FL    ASY+T Q
Sbjct: 177 IAPGLIDTEMLAEVEHD-----LDEAL-KTVPMNRMGQPAEVASLAGFLMSDGASYVTRQ 230

Query: 248 VICVDGGM 255
           VI V+GGM
Sbjct: 231 VISVNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  104 bits (261), Expect = 6e-26
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK--LKGLKVTGSVCDLSSRE 72
           ITGG  G+G A    LA  GA +     N+  L              +V     D+S   
Sbjct: 8   ITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDEA 67

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSKLA 130
           Q E  ++     F G+++   NNA +   K+ L  D  A+    + S N   VF+  +  
Sbjct: 68  QVEAYVDATVEQF-GRIDGFFNNAGIE-GKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             +++  G+G+IV  +SV G+        Y      +  LT++   E  +  IR N+IAP
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185

Query: 191 GVIRTSL-SDAIRHDPAKN--KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           G I T +   +++    +N  +  E  VS  P+ R GEP+EV+++VAFL    A Y+   
Sbjct: 186 GAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAGYVNAA 245

Query: 248 VICVDGG 254
           V+ +DGG
Sbjct: 246 VVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  103 bits (259), Expect = 6e-26
 Identities = 73/245 (29%), Positives = 106/245 (43%), Gaps = 20/245 (8%)

Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG  + IG AI E LA  G+  ++H  +R++ E      E             DLS   
Sbjct: 5   VTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLSDFA 63

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               L+      F G+ ++LVNNA+   P      + +  + L   N ++ + L +    
Sbjct: 64  ACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFAR 122

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            L  S NG I+ I     +T  PLT  Y  Y     A+  LT+    E A  NIR N IA
Sbjct: 123 RLAGSRNGSIINIIDA--MTDRPLTG-YFAYCMSKAALEGLTRSAALELAP-NIRVNGIA 178

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I          D       E  + + P+ R    +E++  V FL     +YITGQ+I
Sbjct: 179 PGLI----LLPEDMDAEYR---ENALRKVPLKRRPSAEEIADAVIFLLDS--NYITGQII 229

Query: 250 CVDGG 254
            VDGG
Sbjct: 230 KVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  101 bits (254), Expect = 7e-26
 Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 10/166 (6%)

Query: 13  YFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTE--LNERLQEWKLKGLKVTGSVCDLS 69
             ITGGT G+G A+   LA  GA  +   SR        E + E +  G +VT + CD++
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVA 62

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE-YMSTLRSTNFESVFHLSK 128
            R+    L+  + +   G L+ +V+NA V       + T E +   L        ++L +
Sbjct: 63  DRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLA-PKVTGAWNLHE 120

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL 174
           L   L      G  V  SSVAGV  +P    Y   N A++ L +H 
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHR 162

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 1e-25
 Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG  I  ELA  GA +     NQ   N    E    G K  G   D+++ +  
Sbjct: 12  VTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAV 71

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP-L 133
              ++ V+  F G +++LV+NA + +     + +      +++ + +  F  +K A   +
Sbjct: 72  NAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHM 130

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            K    G+++++ SV    A+PL   Y      +  L + L  E AK N+R++ + PG +
Sbjct: 131 YKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFV 190

Query: 194 RTSLSDA----------IRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           RT L D           I  +    K++ G   +T        ++V+  V FL    ++ 
Sbjct: 191 RTPLVDKQIPEQAKELGISEEEVVKKVMLG---KTVDGVFTTVEDVAQTVLFLSSFPSAA 247

Query: 244 ITGQVICVDGGMT 256
           +TGQ   V  G  
Sbjct: 248 LTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 2e-25
 Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 18/254 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSR 71
            +TG  +GIG AI    A  GA +     +                G +V     D++  
Sbjct: 11  LVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA 70

Query: 72  EQ-REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
                 +     +   G L++LVNNA + V  + L  T E      + + +  ++  +  
Sbjct: 71  ASVAAAVAAAEEAF--GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAV 128

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P +   G G IV I+S       P    Y      +  LT+ L  E A  N+R N+IAP
Sbjct: 129 LPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAP 188

Query: 191 GVIRTSLSDAI---RHDPAKNKIVEGLVSRT----PICRPGEPDEVSSLVAFLCFPAASY 243
           G I T L++     + DPA  +      + T    P+ R G P+EV+    FL    A +
Sbjct: 189 GYIETQLTEDWWNAQPDPAAAR------AETLALQPMKRIGRPEEVAMTAVFLASDEAPF 242

Query: 244 ITGQVICVDGGMTV 257
           I    I +DGG +V
Sbjct: 243 INATCITIDGGRSV 256

Length = 260

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  100 bits (251), Expect = 8e-25
 Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 16/223 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG  I   LA  G  +    RN     E L      G  V     D    E  
Sbjct: 5   VTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEAVPYDARDPEDA 60

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L++ +   F G++++LV+NA +  P    + +   +    S N  +   L++   P L
Sbjct: 61  RALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALLPAL 119

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           + +G+G +VF++S++G         Y     A+  L   L  E     +R +++ PG + 
Sbjct: 120 REAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVD 179

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
           T ++  +            LV   P     +P ++++LV  + 
Sbjct: 180 TPMAQGLT-----------LVGAFPPEEMIQPKDIANLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  100 bits (250), Expect = 1e-24
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 18/238 (7%)

Query: 23  GHAIVEELAGFGAII--HTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET 80
           G A  E L   G  +  H  S       +  +  +  G K       LS ++  E +   
Sbjct: 14  GPASAEALTEDGYTVVCHDASFADAAERQAFES-ENPGTKA------LSEQKPEELVDAV 66

Query: 81  VSSIFQGKLNLLVNNAAVAVPKEALDTTAE--YMSTLRSTNFESVFHLSKLAHPLLKASG 138
           + +   G +++LV+N  +  P   +D T+E        + +    F L + A   +K +G
Sbjct: 67  LQA--GGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFP-FALLQAAIAQMKKAG 123

Query: 139 NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS 198
            G I+FI+S           LYGP   A   L + L  E ++DNI   +I P    +   
Sbjct: 124 GGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNFFNS--P 181

Query: 199 DAIRHDPAKN--KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
                   +N  ++ E +    P+ R G PDE+ +LVAFL    A  ITGQ     GG
Sbjct: 182 TYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPITGQFFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 99.8 bits (249), Expect = 2e-24
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 8/245 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   G G  I    A  GA +     N         +     + +     D++ R   
Sbjct: 10  VTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQ---ADVTKRADV 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E ++E   S F G+L++LVNNA +    K  L+   E    + + N +S++  ++   P 
Sbjct: 67  EAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALVPH 125

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G G+I+ I+S AG+   P    Y    G +   TK +  E A  NIR N + P   
Sbjct: 126 MEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCPVAG 185

Query: 194 RTS-LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T  LS  +  D  +N+      +  P+ R   PD++++   +L    AS+ITG  + VD
Sbjct: 186 ETPLLSMFMGEDTPENR--AKFRATIPLGRLSTPDDIANAALYLASDEASFITGVALEVD 243

Query: 253 GGMTV 257
           GG  +
Sbjct: 244 GGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 99.2 bits (247), Expect = 3e-24
 Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 10/243 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG  I  +    G  +     ++    +  +        V G V D +     
Sbjct: 6   VTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETLV--- 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
            K +        G++++LVNNAA            E    + S N    + LS+     L
Sbjct: 63  -KFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRDEL 121

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
                G I+ I+S     + P +  Y    G +  LT  L      D IR N I+PG I 
Sbjct: 122 IK-NKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPGWIN 179

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T+  +      A     +   ++ P  R G P ++++LV FLC   A +ITG+   VDGG
Sbjct: 180 TT--EQQEFTAAPLTQED--HAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFIVDGG 235

Query: 255 MTV 257
           MT 
Sbjct: 236 MTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 98.8 bits (247), Expect = 4e-24
 Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 21/249 (8%)

Query: 17  GGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGL-KVTGS---VCDLSSR 71
                I  AI +  A  GA ++ T       +        +  L K   +     D++S 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMG------AVDELAKELPADVIPLDVTSD 56

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLS 127
           E  ++L E V     GK++ LV++ A++      K  LDT+ E        +  S   L+
Sbjct: 57  EDIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLA 115

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K A PL+     G IV +S +A     P     G    A+  L ++L  E  +  IR N+
Sbjct: 116 KAAKPLMNE--GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNT 173

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+ G  +T+    I      +K+VE      P+ R    +EV++  AFL    A  ITGQ
Sbjct: 174 ISAGPTKTTAGSGI---GGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARGITGQ 230

Query: 248 VICVDGGMT 256
           ++ VDGG +
Sbjct: 231 ILYVDGGFS 239

Length = 239

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 98.9 bits (247), Expect = 4e-24
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG++GIG AI E L   G  +   +R+Q EL E   E   KG  V G   D+     
Sbjct: 10  LITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAADVRDEAD 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++ ++ + + F G L++L+ NA V       + T E    +  TN    F+  K A P 
Sbjct: 69  VQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LK  G G I+ ISS+AG         Y      +   ++    +  +  I+ ++I PG +
Sbjct: 128 LKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSV 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
            T  +     +    KI              +P++++ LV  L
Sbjct: 187 ATHFNGHTPSEKDAWKI--------------QPEDIAQLVLDL 215

Length = 237

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 99.3 bits (247), Expect = 4e-24
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 23/253 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAI--IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG AI   LA  GA+  IH   RN+   +E ++E +  G K      DL+S 
Sbjct: 10  LVTGASRGIGRAIAMRLANDGALVAIHY-GRNKQAADETIREIESNGGKAFLIEADLNSI 68

Query: 72  EQREKLMETVSSIFQ-----GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           +  +KL+E + +  Q      ++++LVNNA +       +TT E    + + N ++ F L
Sbjct: 69  DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFL 128

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
            +   PLL+A G   ++ ISS         +  YG   GA+N +T  L     +  I  N
Sbjct: 129 IQQTLPLLRAEGR--VINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVN 186

Query: 187 SIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           +I PG  +T ++  +  DP     A N  V G        R G+ ++++  VAFL    +
Sbjct: 187 TIMPGYTKTDINAKLLDDPEIRNFATNSSVFG--------RIGQVEDIADAVAFLASSDS 238

Query: 242 SYITGQVICVDGG 254
            ++TGQ+I V GG
Sbjct: 239 RWVTGQIIDVSGG 251

Length = 254

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 99.2 bits (247), Expect = 4e-24
 Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   G+G  +   LA  G  I     N  E  E +++    G +      DL   +  
Sbjct: 15  VTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLTADLRKIDGI 72

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L+E   + F G +++LVNNA +   ++A++ + +    + + N +SVF +S+ A    
Sbjct: 73  PALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHF 131

Query: 135 KASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            A GNG  I+ I+S+         P Y      +  +T+ +  E AK NI  N+IAPG +
Sbjct: 132 IAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYM 191

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T+ +  +R D  ++     ++ R P  R G P ++   V FL   A+ YI G  I VDG
Sbjct: 192 ATNNTQQLRADEQRSA---EILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDG 248

Query: 254 G 254
           G
Sbjct: 249 G 249

Length = 253

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 98.8 bits (246), Expect = 5e-24
 Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 7/241 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   G+G  +   LA  GA I        E  E   + +  G K      DL  ++  
Sbjct: 13  ITGCNTGLGQGMAIGLAKAGADI--VGVGVAEAPETQAQVEALGRKFHFITADLIQQKDI 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS-KLAHPL 133
           + ++     +  G +++L+NNA +   ++ L+   +    + + N ++VF LS  +A   
Sbjct: 71  DSIVSQAVEVM-GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQF 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K    G I+ I+S+         P Y     A+  LT+ L  E ++ NI  N+IAPG +
Sbjct: 130 VKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYM 189

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T  + A+R D A+N   E ++ R P  R G PD+++    FL   A+ Y+TG  + VDG
Sbjct: 190 ATDNTAALRADTARN---EAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG 246

Query: 254 G 254
           G
Sbjct: 247 G 247

Length = 251

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 97.9 bits (244), Expect = 1e-23
 Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 9/246 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG A     A  GA +   +    +  + +   +L    ++   CD++     
Sbjct: 9   ITGGASGIGEATARLFAKHGARV-VIADIDDDAGQAVAA-ELGDPDISFVHCDVTVEADV 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              ++T  + F G+L+++ NNA V  A     L+T+ E    +   N    F  +K A  
Sbjct: 67  RAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKHAAR 125

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++  +  G IV ++SVAGV        Y     A+  LT+    E  +  IR N ++P  
Sbjct: 126 VMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVSPYG 185

Query: 193 IRTSLSDAIR--HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           + T L  A     D A  + V G            P+++++ V +L    + Y++GQ + 
Sbjct: 186 VATPLLTAGFGVEDEAIEEAVRGAA--NLKGTALRPEDIAAAVLYLASDDSRYVSGQNLV 243

Query: 251 VDGGMT 256
           VDGG+T
Sbjct: 244 VDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 97.4 bits (243), Expect = 1e-23
 Identities = 59/219 (26%), Positives = 88/219 (40%), Gaps = 22/219 (10%)

Query: 13  YFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
             ITG +RGIG  +V +L   G   +I TC R+ +   E L        ++     D++ 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATC-RDPSAATE-LAALGASHSRLHILELDVTD 58

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKL 129
            E  E        +    L++L+NNA +      A +  +E +  +   N      L++ 
Sbjct: 59  -EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 130 AHPLLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRA 185
             PLL       I+ ISS  G +        Y  Y     A+N LTK L  E  +D I  
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGITV 176

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNK-------IVEGLVSR 217
            S+ PG +RT +        AKNK        V GL+  
Sbjct: 177 VSLHPGWVRTDMGG----PFAKNKGPITPEESVAGLLKV 211

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 97.4 bits (243), Expect = 1e-23
 Identities = 66/251 (26%), Positives = 98/251 (39%), Gaps = 28/251 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-----QTELNERLQEWKLKGLKVTGSVCDLS 69
           ITGG  GIG A  + L   GA +    RN       EL           +K T   CD++
Sbjct: 5   ITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQA-----INPKVKATFVQCDVT 59

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS--TNFESVFHLS 127
           S EQ     +     F G++++L+NNA +   K  L          ++   N   V + +
Sbjct: 60  SWEQLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTT 118

Query: 128 KLAHPLLKAS---GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL-ECEQAKDNI 183
            LA   +  +     G+IV I SVAG+  AP  P+Y      +   T+ L +  + K  +
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGV 178

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+I PG   T L       P        ++   P      P+ V    A +       
Sbjct: 179 RVNAICPGFTNTPL------LPDLVAKEAEMLPSAPTQ---SPEVV--AKAIVYLIEDDE 227

Query: 244 ITGQVICVDGG 254
             G +  VDGG
Sbjct: 228 KNGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 97.4 bits (243), Expect = 2e-23
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 8/208 (3%)

Query: 13  YFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
             +TG +RGIG A+ EEL   G  +++   +R++  L E L+E    GL+VT    DLS 
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQE-LKEELRPGLRVTTVKADLSD 60

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKL 129
               E+L+E +  +  G+ +LL+NNA    P  +      + +      N  S   L+  
Sbjct: 61  AAGVEQLLEAIRKLD-GERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTST 119

Query: 130 AHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                K  G    +V +SS A V       LY     A +   + L  E+   ++R  S 
Sbjct: 120 LLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRVLSY 177

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVS 216
           APGV+ T +   IR   A  +      S
Sbjct: 178 APGVVDTDMQREIRETSADPETRSRFRS 205

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 96.7 bits (241), Expect = 2e-23
 Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSR 71
             +TG T+GIG A+   LA  G  +   +R+  +     L              CDL+  
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFA------------CDLADI 53

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPK--EALDTTAEYMSTLRST---NFESVFHL 126
           EQ    +  ++ I    ++ +VNN  +A+P+    +D     ++ L+     N  +   +
Sbjct: 54  EQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKID-----LAALQDVYDLNVRAAVQV 106

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++     +K    G IV I S A +  A     Y     A+   T+    E A+  I  N
Sbjct: 107 TQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVN 165

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++APG I T L    R  P  ++  + +++  P+ R G P+EV++ +AFL    A +ITG
Sbjct: 166 AVAPGPIETELFRQTR--PVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITG 223

Query: 247 QVICVDGG 254
           QV+ VDGG
Sbjct: 224 QVLGVDGG 231

Length = 234

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 96.5 bits (240), Expect = 3e-23
 Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 2/244 (0%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG A     A  GA +     N+    +   + + KG       CD++ R+  
Sbjct: 8   VTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSV 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +  +        G +++LVNNA          T       L + N     H+     P +
Sbjct: 68  DTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGM 126

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
              G G IV I+S A    +    +Y    G +   +K +  E A+  I  N + PG   
Sbjct: 127 VERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTD 186

Query: 195 TSLSDAIRHDPAK-NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T+L D I        K+ E      P+ R G+PD++   + F     AS+ITGQV+ V G
Sbjct: 187 TALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246

Query: 254 GMTV 257
           G+T+
Sbjct: 247 GLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 96.2 bits (240), Expect = 4e-23
 Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG+A+   LA  GA +    RN  +L E + + +  G        D++     
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSAAV 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +++++ +     G +++LVN A +         + E      + N   VF++S+   P +
Sbjct: 63  DEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPRM 121

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           K   +G IV + S A          Y     A+  LTK L  E A   IR N ++PG   
Sbjct: 122 KRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGSTD 181

Query: 195 TSLSDAIRHDP-AKNKIVEGLVSR----TPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           T +   + +D   + +++ G   +     P+ +  EP ++++ V FL    AS+IT   +
Sbjct: 182 TEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITMHDL 241

Query: 250 CVDGGMTVN 258
            VDGG T+ 
Sbjct: 242 VVDGGATLG 250

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 96.5 bits (241), Expect = 5e-23
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 26/198 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-----DLS 69
           ITG + GIG  +   LA  GA +   +R +    ERL+E K + L++          D+S
Sbjct: 8   ITGASSGIGEELAYHLARLGARLVLSARRE----ERLEEVKSECLELGAPSPHVVPLDMS 63

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
             E  E+++E    +F G L++L+NNA +++     DT+ +    +   N+     L+K 
Sbjct: 64  DLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKA 122

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--------LECEQAKD 181
           A P L     G IV +SS+AG    P    Y          +KH        L  E ++ 
Sbjct: 123 ALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAA--------SKHALQGFFDSLRAELSEP 174

Query: 182 NIRANSIAPGVIRTSLSD 199
           NI    + PG+I T+++ 
Sbjct: 175 NISVTVVCPGLIDTNIAM 192

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 96.3 bits (240), Expect = 5e-23
 Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 17/248 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG A    LA  GA +        E  +   + ++ GL V     D++  +  
Sbjct: 12  ITGGGSGIGLATARRLAAEGATV-VVGDIDPEAGKAAAD-EVGGLFVP---TDVTDEDAV 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEA--LDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             L +T +  + G +++  NNA ++ P++   L+T  +    ++  N  SV+   K A P
Sbjct: 67  NALFDTAAETY-GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALP 125

Query: 133 LLKASGNGIIVFISS-VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            +   G G I+  +S VA + +A     Y    G +  +++ L  + A+  IR N++ PG
Sbjct: 126 HMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPG 185

Query: 192 VIRTSL-SDAIRHDP--AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            + T L  +    DP  A  ++V       P+ R  EP+E+++ VAFL    AS+IT   
Sbjct: 186 PVNTPLLQELFAKDPERAARRLVH-----VPMGRFAEPEEIAAAVAFLASDDASFITAST 240

Query: 249 ICVDGGMT 256
             VDGG++
Sbjct: 241 FLVDGGIS 248

Length = 255

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 96.3 bits (239), Expect = 5e-23
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 13/248 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAI--IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG AI + LA  GA+  IH  +R + E  E + E +  G        +L S 
Sbjct: 8   LVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLESL 66

Query: 72  EQREKLMETVSSIFQG-----KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
              E L  ++ +  Q      K ++L+NNA +       +TT ++   + S N ++ F +
Sbjct: 67  HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFI 126

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
            + A   L+   N  I+ ISS A   + P    Y    GA+N +T  L  +     I  N
Sbjct: 127 IQQALSRLR--DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVN 184

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I PG I+T ++  +  DP   +    +   +   R GE ++++   AFL  P + ++TG
Sbjct: 185 AILPGFIKTDMNAELLSDPMMKQYATTI---SAFNRLGEVEDIADTAAFLASPDSRWVTG 241

Query: 247 QVICVDGG 254
           Q+I V GG
Sbjct: 242 QLIDVSGG 249

Length = 252

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 95.3 bits (237), Expect = 6e-23
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 4/186 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RGIG A    L   G  +  C+R++  L     +   +   V G   D+     
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQ---ELEGVLGLAGDVRDEAD 60

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             + ++ +   F G L+ LVNNA V V K   + T E    +  TN    F+    A P 
Sbjct: 61  VRRAVDAMEEAF-GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPA 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L   G G IV + S+AG  A      Y      +  L++    +  + NIR  ++ PG +
Sbjct: 120 LLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGSV 179

Query: 194 RTSLSD 199
            T  + 
Sbjct: 180 DTGFAG 185

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 96.1 bits (239), Expect = 6e-23
 Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 12/251 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV-CDLSSREQ 73
           +TGG+RGIG  IV      GA +  C+R +        E    G      V CD++  E 
Sbjct: 14  VTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEED 73

Query: 74  REKLM-ETVSSIFQGKLNLLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHLSKLAH 131
            + L+  TV     G+++ LVNNA    P +  D T+A+    L + N  S F  SK A 
Sbjct: 74  IKTLISVTVERF--GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYAL 131

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P L+ S  G I+ +SS+ G         Y    GA+  +TK L  ++++  +R N I+PG
Sbjct: 132 PHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNCISPG 190

Query: 192 VIRTSLSD---AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            I T L +   A   D     I EG +++  + R G   E      FL    A++ TG  
Sbjct: 191 NIWTPLWEELAAQTPDTLAT-IKEGELAQ-LLGRMGTEAESGLAALFLA-AEATFCTGID 247

Query: 249 ICVDGGMTVNG 259
           + + GG  +  
Sbjct: 248 LLLSGGAELGY 258

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 95.6 bits (238), Expect = 7e-23
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 11/246 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG +RGIG A     A  G A+     RN+      +Q  + +G +      D++    
Sbjct: 7   ITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEAD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEYMSTLRSTNFESVFHLSKLAHP 132
             +L E V     G+L+ LVNNA +   +  L+   A  ++ + +TN    F  ++ A  
Sbjct: 67  VLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125

Query: 133 LLK---ASGNGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            +        G IV +SS+A    +P   + Y    GA++ +T  L  E A + IR N++
Sbjct: 126 RMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAV 185

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PGVI T +  A   +P +   V+ + +  P+ R G  +EV+  + +L    ASY TG  
Sbjct: 186 RPGVIYTEIH-ASGGEPGR---VDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTF 241

Query: 249 ICVDGG 254
           I V GG
Sbjct: 242 IDVSGG 247

Length = 248

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 95.2 bits (237), Expect = 1e-22
 Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 13/248 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG A+   L   GA +         L E     +L  L V  +    + RE 
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAA---AVREV 58

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L+        G ++ LVN A V  P      + E      + N   VF+L +   P 
Sbjct: 59  CSRLLAEH-----GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPH 113

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K    G IV ++S A          YG    A+  L+K L  E A   +R N ++PG  
Sbjct: 114 MKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGST 173

Query: 194 RTSLSDAIRHDP-AKNKIVEGLVSR----TPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            T++   + HD     +++ G+  +     P+ +  +P ++++ V FL    A +IT   
Sbjct: 174 DTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMHD 233

Query: 249 ICVDGGMT 256
           + VDGG T
Sbjct: 234 LVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 1e-22
 Identities = 76/273 (27%), Positives = 115/273 (42%), Gaps = 30/273 (10%)

Query: 7   WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC 66
           W + Q   ITGG  GIG A+VE     GA +    R+  +L    Q +   G  V     
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEG 59

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAV--------AVPKEALDTTAEYMSTLRST 118
           D++S    ++ ++     F GKL+  V NA +         +P E LDT  + +    + 
Sbjct: 60  DVTSYADNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIF---NV 115

Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N +     +K A P LKASG G ++F  S +        PLY     A+  L + L  E 
Sbjct: 116 NVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYEL 174

Query: 179 AKDNIRANSIAPGVIRTSL---------SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEV 229
           A   IR N +APG   T L           +I   P    + + + + TP+    +P++ 
Sbjct: 175 APK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPG---LADMIAAITPLQFAPQPEDH 230

Query: 230 SSLVAFLCFPAAS-YITGQVICVDGGMTVNGFN 261
           +     L     S  +TG VI  DGG+ + G  
Sbjct: 231 TGPYVLLASRRNSRALTGVVINADGGLGIRGIR 263

Length = 263

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 95.3 bits (237), Expect = 1e-22
 Identities = 71/269 (26%), Positives = 102/269 (37%), Gaps = 55/269 (20%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG A  E L   G  +      + ++                   DLS+ E R
Sbjct: 4   ITGAASGIGAATAELLEDAGHTVIGIDLREADVI-----------------ADLSTPEGR 46

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              +  V +   G L+ LVN A V     A              N+  +  L +   P L
Sbjct: 47  AAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK--------VNYFGLRALMEALLPRL 98

Query: 135 KASGNGIIVFISSVAGV-------------------TAAPLT-----PLYGPYNGAMNQL 170
           +       V +SS+AG                     A  L      P Y  Y G+   L
Sbjct: 99  RKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEAL 158

Query: 171 T----KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP 226
           T    +          +R N++APG + T +  A   DP   + V+  V  TP+ R  EP
Sbjct: 159 TVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV--TPMGRRAEP 216

Query: 227 DEVSSLVAFLCFPAASYITGQVICVDGGM 255
           DE++ ++AFL   AAS+I G  + VDGG+
Sbjct: 217 DEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.5 bits (235), Expect = 2e-22
 Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 15  ITGGTR--GIGHAIVEELAGFGA-IIHT----CSRNQTELNERLQEWKLK------GLKV 61
           +TG +R  GIG AI +ELA  GA I  T      +      ++ ++ +L+      G+KV
Sbjct: 11  VTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKV 70

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAA--VAVPKEALDTT---AEYMSTLR 116
           +    DL+  +  ++L+  V+    G  ++LVNNAA         L        YM  +R
Sbjct: 71  SSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVR 129

Query: 117 STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
           +T   S     + A    K SG G I+ ++S            Y    GA++ LT  L  
Sbjct: 130 ATTLLSS----QFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAA 184

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           E A   I  N+I PG   T             +I +GL+   P  R GEP + + L+ FL
Sbjct: 185 EVAHLGITVNAINPGPTDTGWMT--------EEIKQGLLPMFPFGRIGEPKDAARLIKFL 236

Query: 237 CFPAASYITGQVICVDGG 254
               A +ITGQ+I  +GG
Sbjct: 237 ASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 94.1 bits (234), Expect = 2e-22
 Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 21/252 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RG+G AI    A  GA +       TE  E +      G +      D+  R+Q 
Sbjct: 5   VTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAA--EAGERAIAIQADVRDRDQV 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP------KEALDTTAE-YMSTLRSTNFESVFHLS 127
           + ++E   + F G ++ +VNNA +  P      K       E Y   L     +   +L 
Sbjct: 63  QAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGA-VKGALNLL 120

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIR 184
           +   P  K  G+G ++ I +   +   P+ P Y  Y     A+   T+++  E     I 
Sbjct: 121 QAVLPDFKERGSGRVINIGT--NLFQNPVVP-YHDYTTAKAALLGFTRNMAKELGPYGIT 177

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N ++ G+++ +  DA    P   ++ + +   TP+ +   P +++  V F   P A  +
Sbjct: 178 VNMVSGGLLKVT--DASAATP--KEVFDAIAQTTPLGKVTTPQDIADAVLFFASPWARAV 233

Query: 245 TGQVICVDGGMT 256
           TGQ + VDGG+ 
Sbjct: 234 TGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 3e-22
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 6/246 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A  +  A  GA +   +R Q EL++ + E + +G +      D+      
Sbjct: 11  ITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYA 70

Query: 75  EKLMETVSSIFQGKLNLLVNNA-AVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           + L+      F G L++  NNA  +       + + E      +TN  S F  +K   P 
Sbjct: 71  KALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPA 129

Query: 134 LKASGNGIIVFISSVAGVTAA-PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A G G ++F S+  G TA  P    Y      +  LT+ L  E     IR N++ PG 
Sbjct: 130 MLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGG 189

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
             T +  A+   P     V GL     + R  +P+E++    FL   AAS++TG  + VD
Sbjct: 190 TDTPMGRAMGDTPEALAFVAGL---HALKRMAQPEEIAQAALFLASDAASFVTGTALLVD 246

Query: 253 GGMTVN 258
           GG+++ 
Sbjct: 247 GGVSIT 252

Length = 254

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 4e-22
 Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 16/253 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSR 71
            I+GGTRGIG AIV E A  G  I  T + N  E N+  ++ + K G+K      ++   
Sbjct: 12  VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP 71

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  ++L + +   F  +++  ++NA ++  +  +    ++M  L+     +++  +  A 
Sbjct: 72  ETYKELFKKIDEDFD-RVDFFISNAIIS-GRAVVGGYTKFMR-LKPKGLNNIYTATVNAF 128

Query: 132 PL--------LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
            +        ++  G G I+ +SS   +        +G    A+  + K+   E  + NI
Sbjct: 129 VVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNI 188

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+++ G I T   DA++      ++       +P+ R G+P++++    FLC   AS+
Sbjct: 189 RVNAVSGGPIDT---DALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASW 245

Query: 244 ITGQVICVDGGMT 256
           +TGQ I VDGG T
Sbjct: 246 LTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 94.2 bits (235), Expect = 4e-22
 Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 23/203 (11%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRN----QTELNERLQEWKLKGLKVTGSVCDL 68
             ITG   GIG     ELA  GA +    RN    +    E  +E      KV     DL
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNA--KVEVIQLDL 61

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           SS     +  E   + F  +L++L+NNA +  P   L  T +      + N+   F L+ 
Sbjct: 62  SSLASVRQFAEEFLARF-PRLDILINNAGIMAPPRRL--TKDGFELQFAVNYLGHFLLTN 118

Query: 129 LAHPLLKASGNGIIVFISSVAGVTA--------APLTPLYGPYNG------AMNQLTKHL 174
           L  P+LKAS    IV +SS+A                  Y PY        A    T+ L
Sbjct: 119 LLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTREL 178

Query: 175 ECEQAKDNIRANSIAPGVIRTSL 197
                   +  N++ PGV+RT L
Sbjct: 179 ARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 93.0 bits (231), Expect = 7e-22
 Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 7/210 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG A    LA  GA +   +R    L     E + +G K      D++  +Q
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQQ 66

Query: 74  REKLME-TVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +  +E TV ++  G+L++LVNNA + +  P E  DTT    + +  TN   + + +  A
Sbjct: 67  VDAAVERTVEAL--GRLDILVNNAGIMLLGPVEDADTTD--WTRMIDTNLLGLMYTTHAA 122

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P       G IV ISSVAG  A   + +Y      +N  ++ L  E  +  +R   I P
Sbjct: 123 LPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEP 182

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPI 220
           G + T L D I H   K    E + +   +
Sbjct: 183 GTVDTELRDHITHTITKEAYEERISTIRKL 212

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 92.8 bits (231), Expect = 7e-22
 Identities = 67/248 (27%), Positives = 102/248 (41%), Gaps = 27/248 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE----LNERL--------QEWKLKGLKV 61
           F+TG +RGIG AI   LA  GA +   ++  +E      + L        +E +  G + 
Sbjct: 7   FVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQA 66

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
              V D+   +Q   L+E     F G+L++LVNNA         DT A+    ++  N  
Sbjct: 67  LPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLR 125

Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
             + LS+ A P +  +G G I+ IS    +  A     Y      M++LT  L  E  + 
Sbjct: 126 GTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRRH 185

Query: 182 NIRANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
            I  NS+ P   I T         PA  ++  G        R   P+ +S  V  +    
Sbjct: 186 GIAVNSLWPSTAIET---------PAATELSGGSDPAR--ARS--PEILSDAVLAILSRP 232

Query: 241 ASYITGQV 248
           A+  TG V
Sbjct: 233 AAERTGLV 240

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 92.8 bits (230), Expect = 1e-21
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 14/248 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG  +       GA +   +R+   L +   E    G KV    CD+S  +Q
Sbjct: 13  LITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQ 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              +++ V++   G +++ V NA +      LD   E    L++TN   VF  ++ A   
Sbjct: 73  VTSMLDQVTAEL-GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131

Query: 133 LLKASGNGIIVFISSVAG--VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           ++K    G+I+  +S++G  +        Y     A+  LTK +  E A   IR NS++P
Sbjct: 132 MVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSP 191

Query: 191 GVIRTSLSDAIR--HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           G I T L +         + KI        P+ R G P+E++ L  +L   A+SY+TG  
Sbjct: 192 GYILTELVEPYTEYQPLWEPKI--------PLGRLGRPEELAGLYLYLASEASSYMTGSD 243

Query: 249 ICVDGGMT 256
           I +DGG T
Sbjct: 244 IVIDGGYT 251

Length = 253

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 91.6 bits (227), Expect = 2e-21
 Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 9/244 (3%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           ++TGG  GIG +I + L   GF  ++  C  N     + L++ K  G     S  ++   
Sbjct: 7   YVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +   + V +   G++++LVNNA +         T E  + +  TN  S+F+++K   
Sbjct: 66  DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +   G G I+ ISSV G         Y      ++  T  L  E A   +  N+++PG
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T +  AIR D     ++E +V+  P+ R G PDE+ S+VA+L    + + TG    +
Sbjct: 185 YIGTDMVKAIRPD-----VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSL 239

Query: 252 DGGM 255
           +GG+
Sbjct: 240 NGGL 243

Length = 246

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 91.8 bits (228), Expect = 2e-21
 Identities = 69/250 (27%), Positives = 101/250 (40%), Gaps = 16/250 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII----HTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
           F+TG   GIG  I   LA  GA +            E  E ++    + +++   V   +
Sbjct: 12  FVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA 71

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
                    E       G L L VN A +A    A +   E   T+   N   VF   + 
Sbjct: 72  DLRAAVARTEAE----LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQA 127

Query: 130 AHPLLKASGNGIIVFISSVAG--VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
               +  +G G IV I+S++G  V    L   Y      +  L+K L  E     IR NS
Sbjct: 128 EARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNS 187

Query: 188 IAPGVIRTSLSDAIRHDPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           I+PG   T ++   R +   + K+ E    +TP+ R  + DE+     FL   AAS+ TG
Sbjct: 188 ISPGYTATPMNT--RPEMVHQTKLFE---EQTPMQRMAKVDEMVGPAVFLLSDAASFCTG 242

Query: 247 QVICVDGGMT 256
             + VDGG  
Sbjct: 243 VDLLVDGGFV 252

Length = 254

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 91.4 bits (227), Expect = 2e-21
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 11/246 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG +RGIG A     A  G ++    +R+     E     +  G +      D+++   
Sbjct: 7   ITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEAD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHP 132
              + + V S F G+L+ LVNNA +  P   L D  A  +  +  TN    +  ++ A  
Sbjct: 67  VIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125

Query: 133 LLKAS---GNGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            L        G IV +SS+A    +P   + Y    GA++ LT  L  E     +R N++
Sbjct: 126 RLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAV 185

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG+I T     I     +      L ++TP+ R GE DEV+  + +L   AASY+TG +
Sbjct: 186 RPGLIETE----IHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL 241

Query: 249 ICVDGG 254
           + V GG
Sbjct: 242 LDVGGG 247

Length = 248

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 91.4 bits (227), Expect = 3e-21
 Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 6/248 (2%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +N  ITG  +GIG  +   LA +GA I             + + + +G+K   +  +++ 
Sbjct: 10  KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH 69

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
           +++ E  +E +     G +++L+NNA +       +   +  + + + N  +VF +S+  
Sbjct: 70  KQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAV 128

Query: 131 HPLLKASGNGIIVFISSV-AGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
              +     G I+ I S+ + +    +TP Y    GA+  LT+ +  E A+ NI+ N IA
Sbjct: 129 ARYMVKRQAGKIINICSMQSELGRDTITP-YAASKGAVKMLTRGMCVELARHNIQVNGIA 187

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG  +T ++ A+  D A       L  RTP  R G+P E+     FL   A+ ++ G ++
Sbjct: 188 PGYFKTEMTKALVEDEA---FTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLL 244

Query: 250 CVDGGMTV 257
            VDGGM V
Sbjct: 245 FVDGGMLV 252

Length = 254

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.7 bits (228), Expect = 3e-21
 Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 15  ITGGTR--GIGHAIVEELAGFGAII--HTCSRNQTELN---ERLQEWKLKG-LKVTGSVC 66
           +TG +R  GIG A+   LA  G  I     S     +       +   LK  ++  G  C
Sbjct: 10  VTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRC 69

Query: 67  -----DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
                DLS      ++   VS    G  ++L+NNAA +      + TAE +    + N  
Sbjct: 70  EHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVR 128

Query: 122 SVFHLSKL--AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
           +   LS         KA G   I+ ++S   +   P    Y    GA+   TK L  E A
Sbjct: 129 ATMLLSSAFAKQYDGKAGGR--IINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA 186

Query: 180 KDNIRANSIAPGVIRTS-LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           +  I  N++ PG   T  +++ ++H          LV + P  R GEP + + L+AFL  
Sbjct: 187 EKGITVNAVNPGPTDTGWITEELKH---------HLVPKFPQGRVGEPVDAARLIAFLVS 237

Query: 239 PAASYITGQVICVDGG 254
             A +ITGQVI  +GG
Sbjct: 238 EEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 90.9 bits (226), Expect = 3e-21
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 8/210 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A+  E A  G  +   +R    L+E   E       V   + D++  E+ 
Sbjct: 3   ITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEERN 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           + ++  +     G L+L++ NA V       D + +       TN      + + A P  
Sbjct: 63  QLVIAELE-AELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQF 121

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           +A G G +V ISSVA +   P    Y     A++ L + L  +  K  IR   I PG I 
Sbjct: 122 RAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFID 181

Query: 195 TSLSDAIRHDP-------AKNKIVEGLVSR 217
           T L+  +   P       A  +I + +   
Sbjct: 182 TPLTANMFTMPFLMSVEQAAKRIYKAIKKG 211

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 90.4 bits (225), Expect = 7e-21
 Identities = 75/244 (30%), Positives = 109/244 (44%), Gaps = 9/244 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQ-EWKLKGLKVTGSVCDLSSRE 72
           +TGGT+G+G AI    A  GA  +  C RN  E  E    E +  G K      DLS  E
Sbjct: 11  VTGGTQGLGAAIARAFAERGAAGLVICGRNA-EKGEAQAAELEALGAKAVFVQADLSDVE 69

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              +++      F G+L+ LVN A +      LDT+ E      + N  + F L + A  
Sbjct: 70  DCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK 128

Query: 133 LLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           L++     G IV I S++     P    Y    GA+  LT++      ++ IR N +  G
Sbjct: 129 LMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIG 188

Query: 192 VIRTSLSDAIR---HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            + T   D I+   H  A +  +E   +  P  R  +PDEV+  VAFL    +  +TG V
Sbjct: 189 WMATEGEDRIQREFHG-APDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSV 247

Query: 249 ICVD 252
           I  D
Sbjct: 248 IDFD 251

Length = 260

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 89.4 bits (222), Expect = 1e-20
 Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 22/243 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSREQ 73
           + GG+RGIG AIV      GA +        +  ERL QE        TG+    +    
Sbjct: 11  VLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--------TGATAVQTDSAD 62

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R+ +++ V     G L++LV NA +AV  +AL+  A+ +  L   N  + +H S  A   
Sbjct: 63  RDAVIDVVRK--SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEA--A 118

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPL--YGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            +    G I+ I SV G    P+  +  Y     A+  + + L  +     I  N + PG
Sbjct: 119 RQMPEGGRIIIIGSVNG-DRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPG 177

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T        +PA   + + + S   I R G P+EV+ +VA+L  P AS++TG +  +
Sbjct: 178 PIDTDA------NPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTI 231

Query: 252 DGG 254
           DG 
Sbjct: 232 DGA 234

Length = 237

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 6/193 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  GIG  +  E A  GA +     N+    E     +  G KV    CD+S RE+
Sbjct: 3   LITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKREE 62

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +  + +     G + +L+NNA V   K+ L+   E +      N  + F  +K   P 
Sbjct: 63  VYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFLPD 121

Query: 134 LKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECE---QAKDNIRANSIA 189
           +    +G IV I+SVAG ++ A L   Y     A     + L  E     K  I+   + 
Sbjct: 122 MLERNHGHIVTIASVAGLISPAGLAD-YCASKAAAVGFHESLRLELKAYGKPGIKTTLVC 180

Query: 190 PGVIRTSLSDAIR 202
           P  I T +   ++
Sbjct: 181 PYFINTGMFQGVK 193

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 89.8 bits (223), Expect = 1e-20
 Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 33/256 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG  I  +L   GA ++   R    +L    +E + +G K     CD S  ++
Sbjct: 8   VTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSDDDE 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAV--------------PKEALDTTAEYMST--LRS 117
            E L E V+   QG+L++LVNNA  AV              P    D     ++   LR+
Sbjct: 68  VEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD----INNVGLRA 123

Query: 118 TNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
               SV+     A PL+  +G G+IV ISS  G+        YG    A++++   +  E
Sbjct: 124 HYACSVY-----AAPLMVKAGKGLIVIISSTGGLEYL-FNVAYGVGKAAIDRMAADMAHE 177

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS--SLVAF 235
                +   S+ PG +RT   + +   P  ++       R      GE  E S   +VA 
Sbjct: 178 LKPHGVAVVSLWPGFVRT---ELVLEMPEDDEGSWHAKERD-AFLNGETTEYSGRCVVAL 233

Query: 236 LCFPAASYITGQVICV 251
              P    ++G+V+  
Sbjct: 234 AADPDLMELSGRVLIT 249

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 16/210 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLS 69
            ITGG+ GIG A+ +EL   GA +   +R++++L E ++E + +    G KV+    DLS
Sbjct: 5   LITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLS 64

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
             E+ E+          G  +L+VN A +++P    D TAE        N+    +++  
Sbjct: 65  DYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVAHA 123

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYG--PYNG---AMNQLTKHLECEQAKDNIR 184
             PL+K    G IVF+SS A      L  +YG   Y     A+  L + L  E    NIR
Sbjct: 124 VLPLMKEQRPGHIVFVSSQAA-----LVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 185 ANSIAPGVIRTSLSDA-IRHDPAKNKIVEG 213
            + + P    T   +   +  P + K +EG
Sbjct: 179 VSVVYPPDTDTPGFEEENKTKPEETKAIEG 208

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 19/252 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ++G   G+G  +    A  GA +   +R    L+E   E    G +      D++  +Q 
Sbjct: 10  VSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQC 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS---TNFESVFHLSKLAH 131
             L+      F G+++ LVNNA      + L       +  R+    N      L++   
Sbjct: 70  ANLVALALERF-GRVDALVNNAFRVPSMKPLADAD--FAHWRAVIELNVLGTLRLTQAFT 126

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSI 188
           P L  SG G IV I+S+  V      P YG Y    GA+   ++ L  E     IR NS+
Sbjct: 127 PALAESG-GSIVMINSM--VLRHSQ-PKYGAYKMAKGALLAASQSLATELGPQGIRVNSV 182

Query: 189 APGVI-RTSLSDAIRHDPAK-----NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           APG I    L    RH   K      +I     + + + R    DEV+S V FL    A 
Sbjct: 183 APGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLAR 242

Query: 243 YITGQVICVDGG 254
            ITGQ + V+ G
Sbjct: 243 AITGQTLDVNCG 254

Length = 258

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 12/198 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGGT GIG A+  +    G  +    R +    ERL E K +   +   V D+   E  
Sbjct: 10  ITGGTSGIGLALARKFLEAGNTVIITGRRE----ERLAEAKKELPNIHTIVLDVGDAESV 65

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD---TTAEYMSTLRSTNFESVFHLSKLAH 131
           E L E + S +   L++L+NNA +  P +  D      +  + +  TN      L K   
Sbjct: 66  EALAEALLSEYP-NLDILINNAGIQRPIDLRDPASDLDKADTEID-TNLIGPIRLIKAFL 123

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD-NIRANSIAP 190
           P LK      IV +SS          P+Y     A++  T  L   Q KD  +    I P
Sbjct: 124 PHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALR-HQLKDTGVEVVEIVP 182

Query: 191 GVIRTSLSDAIRHDPAKN 208
             + T L +  R +P   
Sbjct: 183 PAVDTELHEE-RRNPDGG 199

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 88.8 bits (220), Expect = 2e-20
 Identities = 76/249 (30%), Positives = 113/249 (45%), Gaps = 17/249 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG+RGIG A    LA  G  +     +N     E +      G K      D+S   Q
Sbjct: 6   VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQ 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDT-TAEYMSTLRSTNFESVF-----HLS 127
              +   +       L  LVNNA +   +  ++  TAE ++ + STN    F      + 
Sbjct: 66  VVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124

Query: 128 KLAHPLLKASGNG-IIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRA 185
           ++A    K  G+G  IV +SS A    AP   + Y    GA++ LT  L  E A   IR 
Sbjct: 125 RMAL---KHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N + PG I T +  A   +P +   V+ + S  P+ R G+P+EV+  + +L    ASY+T
Sbjct: 182 NCVRPGFIYTEMH-ASGGEPGR---VDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVT 237

Query: 246 GQVICVDGG 254
           G  I + GG
Sbjct: 238 GSFIDLAGG 246

Length = 247

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 89.5 bits (222), Expect = 3e-20
 Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 19/248 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAII-----HTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
           ITG   GIG A     A  GA I         ++  E+ + +Q    K + + G + D +
Sbjct: 60  ITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA 119

Query: 70  -SREQREKLMETVSSIFQGKLNLLVNNAA--VAVPKEALDTTAEYMSTLRSTNFESVFHL 126
             R+  E+ ++ +     G L++LVN A    AV   A  TT ++ +T + TN  ++F L
Sbjct: 120 FCRQLVERAVKEL-----GGLDILVNIAGKQTAVKDIADITTEQFDATFK-TNVYAMFWL 173

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
            K A P L    +  I+   S+     +P    Y     A+   TK L  + A+  IR N
Sbjct: 174 CKAAIPHLPPGAS--IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVN 231

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++APG + T L  +    P K   +    S TP+ RPG+P E++ L   L    +SY+TG
Sbjct: 232 AVAPGPVWTPLQPSGGQPPEK---IPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG 288

Query: 247 QVICVDGG 254
           +V  V GG
Sbjct: 289 EVFGVTGG 296

Length = 300

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 88.0 bits (219), Expect = 4e-20
 Identities = 78/267 (29%), Positives = 114/267 (42%), Gaps = 40/267 (14%)

Query: 13  YFITG--GTRGIGHAIVEELAGFGA-IIHTC-----SRNQTELNERLQEWKLKGLKVTGS 64
             ITG    R I   I + L   GA +  T       +   +L ERL E  L        
Sbjct: 4   ILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL------ 57

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE--- 121
            CD+S+ E+ ++L   V   + GKL+ LV++ A A PK  L     ++ T R   F    
Sbjct: 58  PCDVSNDEEIKELFAEVKKDW-GKLDGLVHSIAFA-PKVQL--KGPFLDTSRK-GFLKAL 112

Query: 122 --SVFHLSKLAHPLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNG------AMNQLTK 172
             S + L  LA   L     G  IV +S +      P       YN       A+    +
Sbjct: 113 DISAYSLVSLAKAALPIMNPGGSIVTLSYLGSERVVP------GYNVMGVAKAALESSVR 166

Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
           +L  E  +  IR N+I+ G I+T  +  I      +K++E    R P+ R    +EV + 
Sbjct: 167 YLAYELGRKGIRVNAISAGPIKTLAASGI---TGFDKMLEYSEQRAPLGRNVTAEEVGNT 223

Query: 233 VAFLCFPAASYITGQVICVDGGMTVNG 259
            AFL    +S ITG++I VDGG  + G
Sbjct: 224 AAFLLSDLSSGITGEIIYVDGGYHIMG 250

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 87.8 bits (218), Expect = 4e-20
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 3/183 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A     A  GA +   +R+   L+E  +E +  G +    V D++   Q 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E+  +T    F G+++  VNNA VAV     D T E    +   N+    + +  A P L
Sbjct: 65  ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD--NIRANSIAPGV 192
           +  G G ++ + S+ G  +APL   Y     A+   T+ L  E A D   I    + P  
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183

Query: 193 IRT 195
           + T
Sbjct: 184 MNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 87.7 bits (218), Expect = 6e-20
 Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 3/184 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A+   LA  GA +   +RN+T L    QE    G +      D+S  E  
Sbjct: 6   ITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEAC 65

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTA-EYMSTLRSTNFESVFHLSKLAHPL 133
           E+L+E   + F G +++LVNNA + +     + T       +   N+    + +  A P 
Sbjct: 66  ERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPH 124

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS  G IV +SS+AG+T  P    Y     A++     L  E A D +    + PG +
Sbjct: 125 LKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFV 183

Query: 194 RTSL 197
            T +
Sbjct: 184 ATDI 187

Length = 263

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.1 bits (216), Expect = 9e-20
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +N  ITG  RGIG A+   LA  G  +   +R +  L    +E +  G+KV  +  D+S 
Sbjct: 8   KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD 67

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            E+    +E + +   G +++L+NNA ++   + L+        +   N   V++ ++  
Sbjct: 68  YEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAV 126

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P +    +G I+ ISS AG   A +T  Y      +  LT+ L  E  K NIR  ++ P
Sbjct: 127 LPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTP 186

Query: 191 GVIRTSLS 198
             + T ++
Sbjct: 187 STVATDMA 194

Length = 239

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 37/269 (13%)

Query: 12  NYFITG--GTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV--- 65
              I G    R I   I + LA  GA +  T         ERL++   +  +  GS    
Sbjct: 8   RILIMGVANNRSIAWGIAKALAEQGAELAFTY------QGERLEKRVEELAEELGSDLVL 61

Query: 66  -CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-----DTTAEYMSTLRSTN 119
            CD+++ E  + L  T+   + GKL+ LV++ A A PKE L     DT+ E        +
Sbjct: 62  PCDVTNDESIDALFATIKKKW-GKLDGLVHSIAFA-PKEELKGDYLDTSREGFLIAMDIS 119

Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG------AMNQLTKH 173
             S   L+K A PL+     G I+ ++ +      P       YN       A+    ++
Sbjct: 120 AYSFTALAKAARPLMN--NGGSILTLTYLGSERVVP------NYNVMGVAKAALEASVRY 171

Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLV 233
           L  +  K+ IR N+I+ G IRT  +  I       K+++   +  P+ R    +EV +  
Sbjct: 172 LAADLGKEGIRVNAISAGPIRTLAASGIGD---FRKMLKENEANAPLRRNVTIEEVGNTA 228

Query: 234 AFLCFPAASYITGQVICVDGGMTVNGFNP 262
           AFL    +S ITG++I VD G  + G  P
Sbjct: 229 AFLLSDLSSGITGEIIYVDSGYHIMGMGP 257

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 86.8 bits (215), Expect = 1e-19
 Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 15/257 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSS 70
           F T  ++GIG  +   LA  GA +   SRN+  L ++ +E K+K    + V+  V DL+ 
Sbjct: 12  FTTASSKGIGFGVARVLARAGADVILLSRNEENL-KKARE-KIKSESNVDVSYIVADLTK 69

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE-YMSTLRSTNFESVFHLSKL 129
           RE  E+ ++ + +I  G+ ++   +     P   ++ + E +   ++   + +V+ L++ 
Sbjct: 70  REDLERTVKELKNI--GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVY-LTRA 126

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P ++  G G I++ +SVA     P   L      +M  L + L  E     I  N I 
Sbjct: 127 LVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIM 186

Query: 190 PGVIRTSLSDAIRHDPAK--NKIVE----GLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           PG+IRT     +  D AK   K VE          P+ R GEP+E+  LVAFL     SY
Sbjct: 187 PGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSY 246

Query: 244 ITGQVICVDGGMTVNGF 260
           I G +I VDGG   + F
Sbjct: 247 INGAMIPVDGGRLNSVF 263

Length = 263

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 23/254 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG  +GIG  +    A  GA +    R  +EL +E   E +  G +      DL +   
Sbjct: 13  VTGAAQGIGRGVALRAAAEGARVVLVDR--SELVHEVAAELRAAGGEALALTADLETYAG 70

Query: 74  REKLMETVSSIFQGKLNLLVNN---AAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +  M      F G++++L+NN      A P E      +  + +R + F +++   +  
Sbjct: 71  AQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEY-EEEQIEAEIRRSLFPTLW-CCRAV 127

Query: 131 HPLLKASGNGIIVFISSVA--GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            P + A G G IV +SS+A  G+   P    Y    G +N LT  L  E A+  IR N++
Sbjct: 128 LPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAEHGIRVNAV 183

Query: 189 APG--------VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           APG        V R +   + +      +IV+  +  + + R G  DE  + + FL    
Sbjct: 184 APGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDE 243

Query: 241 ASYITGQVICVDGG 254
           ASYITG V+ V GG
Sbjct: 244 ASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 24/262 (9%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVC 66
             +   +TGG+ GIG A VE L   GA +  C R++  L         K  G ++  + C
Sbjct: 7   EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARC 66

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+            V + F G +++LVNNA         DTT +         + SV + 
Sbjct: 67  DVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++   PLL+AS    IV ++S+  +   P           +  L K L  E A   +R N
Sbjct: 126 TRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVN 185

Query: 187 SIAPGVIRT--------SLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
           SI  G++ +        + +D  +         A+ K         P+ R G PDE +  
Sbjct: 186 SILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK-------GIPLGRLGRPDEAARA 238

Query: 233 VAFLCFPAASYITGQVICVDGG 254
           + FL  P +SY TG  I V GG
Sbjct: 239 LFFLASPLSSYTTGSHIDVSGG 260

Length = 265

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 3e-19
 Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 11/244 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGGT GIG     +    GA +    R+   L     E    G        D      +
Sbjct: 11  ITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQ 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           + L + ++  F G+L+ +  NA VA      D          +TN +  + L +   PLL
Sbjct: 68  KALAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLL 126

Query: 135 K--ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
              AS    IV   S+      P + +Y     A+  L K L  E     IR N+++PG 
Sbjct: 127 ANPAS----IVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGP 182

Query: 193 IRTSLSDAIRHDPAKNKIV-EGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           ++T L   +    A    V   + +  P+ R G P+E++  V +L    +++I G  I V
Sbjct: 183 VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIV 242

Query: 252 DGGM 255
           DGGM
Sbjct: 243 DGGM 246

Length = 249

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 3e-19
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 22/260 (8%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           N  +T  +RGIG  +  EL   GA +   SRN+  L + L+E K  G +V     DLS +
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDK 60

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV---FHLSK 128
           +  + L++    +  G ++ LV NA     +  +   A Y   L +     V   +  + 
Sbjct: 61  DDLKNLVKEAWELL-GGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTP--LYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           L    L+    G++V++SSV+     P+ P  L       + QL K +        IRA 
Sbjct: 120 LIQAWLEKKMKGVLVYLSSVS--VKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAY 177

Query: 187 SI------APG----VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           ++       PG    + R +    +  +    + V   + RTP+ R G  +E+ SL+AFL
Sbjct: 178 TVLLGSFDTPGARENLARIAEERGVSFEETWEREV---LERTPLKRTGRWEELGSLIAFL 234

Query: 237 CFPAASYITGQVICVDGGMT 256
               A Y+ G  I  DG MT
Sbjct: 235 LSENAEYMLGSTIVFDGAMT 254

Length = 259

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 88.0 bits (218), Expect = 7e-19
 Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSR 71
           F+TGG  GIG      LA  GA +     N         E   +    +      D++  
Sbjct: 418 FVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE 477

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +     V+  + G ++++VNNA +A      +TT +             F +++ A 
Sbjct: 478 QAVKAAFADVALAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF 536

Query: 132 PLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             ++  G  G IVFI+S   V A      Y     A   L + L  E     IR N++ P
Sbjct: 537 RQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNP 596

Query: 191 -GVIRTS--------LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
             V++ S           A  +    +++ E    RT + R   P +++  V FL    +
Sbjct: 597 DAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKS 656

Query: 242 SYITGQVICVDGGM 255
              TG +I VDGG+
Sbjct: 657 EKTTGCIITVDGGV 670

Length = 676

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 83.7 bits (207), Expect = 1e-18
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 10/218 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQ 73
           +TG + GIG A+   L   G  +  C+R   ++     E +  G   +    CDLS+ EQ
Sbjct: 11  VTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSNEEQ 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +   + +  QG +++ +NNA +A P+  L    E    +   N  ++   ++ A+  
Sbjct: 71  ILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREAYQS 129

Query: 134 LKASG--NGIIVFISSVAG--VTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANS 187
           +K     +G I+ I+S++G  V    +   Y     A+  LT+ L  E  +AK +IRA S
Sbjct: 130 MKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRATS 189

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGE 225
           I+PG++ T    A +      +         P  +P +
Sbjct: 190 ISPGLVETEF--AFKLHDNDPEKAAATYESIPCLKPED 225

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 83.2 bits (206), Expect = 2e-18
 Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-----DTTAEYMSTLRSTNF 120
           CD+    Q E+  ET+   + GKL++LV+  A A  KE L      T+ E  +     + 
Sbjct: 66  CDVQDDAQIEETFETIKQKW-GKLDILVHCLAFA-GKEELIGDFSATSREGFARALEISA 123

Query: 121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
            S+  L K A PL+   G+  IV ++ + GV A P   + G    A+    ++L  E   
Sbjct: 124 YSLAPLCKAAKPLMSEGGS--IVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGP 181

Query: 181 DNIRANSIAPGVIRTSLSDAIR--HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
            NIR N+I+ G IRT  S A+    D   +  VE    + P+ R     EV +  AFL  
Sbjct: 182 KNIRVNAISAGPIRTLASSAVGGILDMIHH--VE---EKAPLRRTVTQTEVGNTAAFLLS 236

Query: 239 PAASYITGQVICVDGGMTVNGF 260
             AS ITGQ I VD G  + G 
Sbjct: 237 DLASGITGQTIYVDAGYCIMGM 258

Length = 258

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 82.8 bits (205), Expect = 3e-18
 Identities = 74/271 (27%), Positives = 108/271 (39%), Gaps = 35/271 (12%)

Query: 7   WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC 66
           W   +   ITGG  G+G A+VE     GA +    R+  ++ E   ++    + V G V 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVR 60

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAV--------AVPKEALDTTAEYMSTLRST 118
            L+       +   V     GKL+  + NA +         +P+E LD   + +      
Sbjct: 61  SLAD--NERAVARCVERF--GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELF---HI 113

Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N +     +K A P L A+  G ++F  S AG       PLY     A+  L K L  E 
Sbjct: 114 NVKGYILGAKAALPALYAT-EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYEL 172

Query: 179 AKDNIRANSIAPGVIRTSLS-------DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSS 231
           A  +IR N +APG + T L                   + + L S  P+    EP++ + 
Sbjct: 173 AP-HIRVNGVAPGGMVTDLRGPASLGQGETSIS--TPPLDDMLKSILPLGFAPEPEDYTG 229

Query: 232 LVAFLCFPAAS-----YITGQVICVDGGMTV 257
              FL    AS       TG VI  DGGM V
Sbjct: 230 AYVFL----ASRGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 5e-18
 Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 31/257 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAI-------IHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
           +TG   GIG A+ E     GA                 E+        L          D
Sbjct: 11  LTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSL----------D 60

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-SVFHL 126
           ++ ++  ++++      F G +++L NNAA+      LD + +    L + N +   F +
Sbjct: 61  VTRQDSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
             +A  +++    G I+ ++S AG     L   Y     A+   T+       +  I  N
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179

Query: 187 SIAPGVIRTSLSDAI---------RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
           +IAPGV+ T + D +         R    K ++V   V   P+ R G PD+++ +  FL 
Sbjct: 180 AIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAV---PLGRMGVPDDLTGMALFLA 236

Query: 238 FPAASYITGQVICVDGG 254
              A YI  Q   VDGG
Sbjct: 237 SADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 82.3 bits (204), Expect = 5e-18
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-----GLKVTGSVCDL 68
            ITG + GIG A     A  GA +    R      ERLQE   +      +KV     D+
Sbjct: 4   LITGASSGIGEATARRFAKAGAKLILTGRRA----ERLQELADELGAKFPVKVLPLQLDV 59

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEY----MSTLRSTNFESVF 124
           S RE  E  +E +   F+  +++LVNNA +A+    LD   E       T+  TN + + 
Sbjct: 60  SDRESIEAALENLPEEFR-DIDILVNNAGLAL---GLDPAQEADLEDWETMIDTNVKGLL 115

Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
           ++++L  P++ A   G I+ + S+AG        +Y     A+ Q + +L  +     IR
Sbjct: 116 NVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIR 175

Query: 185 ANSIAPGVIRTSLS------DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
             +I PG++ T  S      D  + D    K+ EG+    P+     P++++  + ++
Sbjct: 176 VTNIEPGLVETEFSLVRFHGDKEKAD----KVYEGV---EPLT----PEDIAETILWV 222

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.3 bits (201), Expect = 1e-17
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCD 67
           +EQ   +TGG+RG+G AI    A  GA +        +  E L  E   + + +   V D
Sbjct: 4   SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD 63

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAV-------AVPKEALDTTAEYMSTLRSTNF 120
              REQ + +  T +  F   +  +VNNA         A  K    T  ++   L  +  
Sbjct: 64  ---REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGS-V 119

Query: 121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECE 177
           +   +  + A P ++  G G I+ I +   +   P+ P Y  Y     A+  LT++L  E
Sbjct: 120 KGALNTIQAALPGMREQGFGRIINIGT--NLFQNPVVP-YHDYTTAKAALLGLTRNLAAE 176

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
                I  N ++ G++RT+ + A   D    ++ + + + TP+ +   P E +  V F  
Sbjct: 177 LGPYGITVNMVSGGLLRTTDASAATPD----EVFDLIAATTPLRKVTTPQEFADAVLFFA 232

Query: 238 FPAASYITGQVICVDGGMTVN 258
            P A  +TGQ + VDGG+ +N
Sbjct: 233 SPWARAVTGQNLVVDGGLVMN 253

Length = 253

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 2/211 (0%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
               ITG   G+G AI    A  G  +     N+    E L+  +  G       CD+  
Sbjct: 1   NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD 60

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
             Q   L +     + G ++++VNNA VA      + + E      + N   V    K  
Sbjct: 61  YSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            PL K   +G IV I+S+AG+   P    Y      +  L++ L  E A D I  + + P
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Query: 191 GVIRTSLSDAIR-HDPAKNKIVEGLVSRTPI 220
              +T+L D+ R  +PA    V  L+ ++PI
Sbjct: 180 SFFQTNLLDSFRGPNPAMKAQVGKLLEKSPI 210

Length = 270

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 1e-17
 Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 47/267 (17%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG+ G+G A+ +  A  GA +    R + +L E   E +    +V     D+ + E  
Sbjct: 6   ITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDV 65

Query: 75  EKLMETVSSIFQGKLNLLVNNAA--VAVPKEALDTTAEYMSTLRSTN-FESV-------- 123
           +K++E +   F G+++ L+NNAA     P E L           S N + SV        
Sbjct: 66  QKMVEQIDEKF-GRIDALINNAAGNFICPAEDL-----------SVNGWNSVIDIVLNGT 113

Query: 124 FHLSKLAHPLLKASGNG---------IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL 174
           F+ S+       A G           II  +++ A      +        G +  +T+ L
Sbjct: 114 FYCSQ-------AVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA-MTRTL 165

Query: 175 ECEQAKD-NIRANSIAPGVI-RTSLSDA-IRHDPAKNKIVEGLVSRTPICRPGEPDEVSS 231
             E  +   IR N+IAPG I RT  +D     + A  + ++ +    P+ R G P+E++ 
Sbjct: 166 AVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSV----PLGRLGTPEEIAG 221

Query: 232 LVAFLCFPAASYITGQVICVDGGMTVN 258
           L  FL    A+YI G  I +DGG  +N
Sbjct: 222 LAYFLLSDEAAYINGTCITMDGGQWLN 248

Length = 252

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 4e-17
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 19/242 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GG+ GIG A+    A  GA +   SR++  L    +        V  +  D++     
Sbjct: 2   VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAAV 60

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           +           G  + +V  AA     P  AL   A   +    + F   + +++ A  
Sbjct: 61  DAFFAEA-----GPFDHVVITAADTPGGPVRALPLAAAQAAM--DSKFWGAYRVARAAR- 112

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +   G+  + F+S  A V  +    L G  N A+  L + L  E A   +R N+++PG+
Sbjct: 113 -IAPGGS--LTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGL 167

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T L   +  D A+  +      R P  R G+P++V++ + FL   A  + TG  + VD
Sbjct: 168 VDTPLWSKLAGD-AREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLVD 224

Query: 253 GG 254
           GG
Sbjct: 225 GG 226

Length = 230

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 79.2 bits (196), Expect = 6e-17
 Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 25/258 (9%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +  ++TG  +GIG+A+       GA +    +              +       V D+S 
Sbjct: 9   KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA---------FLTQEDYPFATFVLDVSD 59

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
                ++ + + +   G L++LVN A +         + E      + N    F+L +  
Sbjct: 60  AAAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAV 118

Query: 131 HPLLKASGNGIIVFISSVAGVT-----AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
            P  +   +G IV + S A        AA     YG    A+  L K +  E A   +R 
Sbjct: 119 MPQFRRQRSGAIVTVGSNAAHVPRIGMAA-----YGASKAALTSLAKCVGLELAPYGVRC 173

Query: 186 NSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSR----TPICRPGEPDEVSSLVAFLCFPA 240
           N ++PG   T +   +  D   + +++ G   +     P+ +   P E+++ V FL    
Sbjct: 174 NVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL 233

Query: 241 ASYITGQVICVDGGMTVN 258
           AS+IT Q I VDGG T+ 
Sbjct: 234 ASHITLQDIVVDGGATLG 251

Length = 252

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 79.2 bits (195), Expect = 6e-17
 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 21/252 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG  RGIG A  +     GA +     N         E       ++  V D +S ++ 
Sbjct: 8   ITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASIDR- 66

Query: 75  EKLMETVSSIFQ--GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
                 V+++    G +++LVNNAA+      +D T E    L + N      + +    
Sbjct: 67  -----CVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQAVAR 121

Query: 133 LLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            + A G G  I+ ++S AG     L  +Y     A+  LT+       +  I  N+IAPG
Sbjct: 122 AMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPG 181

Query: 192 VIRTSLSDAI---------RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           V+     D +         R    K ++V   V   P  R G  ++++ +  FL    A 
Sbjct: 182 VVDGEHWDGVDAKFARYENRPRGEKKRLVGEAV---PFGRMGRAEDLTGMAIFLASTDAD 238

Query: 243 YITGQVICVDGG 254
           YI  Q   VDGG
Sbjct: 239 YIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 79.4 bits (196), Expect = 6e-17
 Identities = 76/267 (28%), Positives = 109/267 (40%), Gaps = 35/267 (13%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSRE 72
            +TGG  G+G AIV+     GA +    ++       LQE     G  V G   D+ S +
Sbjct: 9   LVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEGDVRSLD 64

Query: 73  -QREKLMETVSSIFQGKLNLLVNNAA--------VAVPKEALDTTAEYMSTLRSTNFESV 123
             +E +   V++   GK++ L+ NA         V +P + +D   + +      N +  
Sbjct: 65  DHKEAVARCVAAF--GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVF---HINVKGY 119

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
               K A P L AS  G ++F  S AG       PLY     A+  L K L  E A   +
Sbjct: 120 LLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP-YV 177

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIV-----EGLVSRTPICRPGEPDEVSSLVAFLC- 237
           R N +APG + + L        A   I      + L S  PI R  + +E +    F   
Sbjct: 178 RVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFAT 237

Query: 238 ----FPAASYITGQVICVDGGMTVNGF 260
                PA    TG V+  DGGM V GF
Sbjct: 238 RGDTVPA----TGAVLNYDGGMGVRGF 260

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 78.9 bits (195), Expect = 8e-17
 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 27/254 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  G+G A VE L   GA +       +   E + +       V     D++S +  
Sbjct: 7   VTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKLGDNCRFVP---VDVTSEKDV 62

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-------KEALDTTAEYMSTLRSTNFESVFHLS 127
           +  +    + F G+L+++VN A +AV         +   +   +   + + N    F++ 
Sbjct: 63  KAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVI-NVNLIGTFNVI 120

Query: 128 KLAHPLL-KASGN-----GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           +LA   + K   +     G+I+  +SVA          Y    G +  +T  +  + A  
Sbjct: 121 RLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAPQ 180

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCFPA 240
            IR  +IAPG+  T L   +   P K +  + L  + P   R G+P E + LV  +    
Sbjct: 181 GIRVVTIAPGLFDTPLLAGL---PEKVR--DFLAKQVPFPSRLGDPAEYAHLVQHII--E 233

Query: 241 ASYITGQVICVDGG 254
             Y+ G+VI +DG 
Sbjct: 234 NPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 77.8 bits (192), Expect = 1e-16
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 21/210 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAI-IHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSS 70
           +TG  RGIG A VE L   GA  ++   R+      L          G KV     D++ 
Sbjct: 8   VTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVA------KYGDKVVPLRLDVTD 61

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR---STNFESVFHLS 127
            E  +        +     ++++NNA V  P   L      +  L+     N   +  L+
Sbjct: 62  PESIKAAAAQAKDV-----DVVINNAGVLKPATLL--EEGALEALKQEMDVNVFGLLRLA 114

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           +   P+LKA+G G IV ++SVA +   P    Y     A   LT+ L  E A       S
Sbjct: 115 QAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLS 174

Query: 188 IAPGVIRTSLSDAI-RHDPAKNKIVEGLVS 216
           + PG I T ++        +   + E ++ 
Sbjct: 175 VHPGPIDTRMAAGAGGPKESPETVAEAVLK 204

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 77.9 bits (192), Expect = 1e-16
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 11/186 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG A+ +     G  +  C RN+  L E   E      ++   VCD++ R+ R
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSR 65

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR---STNFESVFHLSKLAH 131
            +L+E +   +   LN+L+NNA +   ++ L    + +       +TN  +   L+ L  
Sbjct: 66  RELVEWLKKEYP-NLNVLINNAGIQRNED-LTGAEDLLDDAEQEIATNLLAPIRLTALLL 123

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD-NIRANSIAP 190
           P L       I+ +SS         TP+Y     A++  T  L  EQ KD ++    +AP
Sbjct: 124 PHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALR-EQLKDTSVEVIELAP 182

Query: 191 GVIRTS 196
            ++ T+
Sbjct: 183 PLVDTT 188

Length = 245

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 2e-16
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 19/253 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK---VTGSVCDLSS 70
            +TG + G+G    + LA  GA +   SR    L E   E + +G     V+  V D  S
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQS 72

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +      ET +    G +++LVNN+ V+  ++ +D T      +  TN    F +++  
Sbjct: 73  IKAAVAHAETEA----GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEV 128

Query: 131 HPLLKASGNGI--------IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
              + A   G         I+ I+SVAG+   P   LY     A+  +T+ +  E  +  
Sbjct: 129 AKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHG 188

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N+I PG I T     I H   + +  + LVS  P  R G+P+++  L+  L    + 
Sbjct: 189 INVNAICPGYIDTE----INHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQ 244

Query: 243 YITGQVICVDGGM 255
           +I G +I  D G 
Sbjct: 245 FINGAIISADDGF 257

Length = 258

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-----DTTAEYMSTLRSTNF 120
            D+    Q E +   ++  + G+L+ L+++ A A PKE L     D + E  +     + 
Sbjct: 67  LDVREPGQLEAVFARIAEEW-GRLDFLLHSIAFA-PKEDLHGRVVDCSREGFALAMDVSC 124

Query: 121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY---GPYNGAMNQLTKHLECE 177
            S   +++LA PL+   G+   +   S  G  A  +   Y   GP   A+    ++L  E
Sbjct: 125 HSFIRMARLAEPLMTNGGS---LLTMSYYG--AEKVVENYNLMGPVKAALESSVRYLAAE 179

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
                IR ++I+PG ++T  +  I      + ++E    R P+ R  + D+V ++ AFL 
Sbjct: 180 LGPKGIRVHAISPGPLKTRAASGIDD---FDALLEDAAERAPLRRLVDIDDVGAVAAFLA 236

Query: 238 FPAASYITGQVICVDGGMTV 257
             AA  +TG  + +DGG  +
Sbjct: 237 SDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.7 bits (189), Expect = 9e-16
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 21/250 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG   G+G A    LA  GA  +++  +    + ++ L E +  G K      D+S R 
Sbjct: 17  VTGAAAGLGRAEALGLARLGATVVVNDVASA-LDASDVLDEIRAAGAKAVAVAGDISQRA 75

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             ++L+ T   +  G L+++VNNA +   +   + + E    + + +    F L++ A  
Sbjct: 76  TADELVATAVGL--GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133

Query: 133 LL----KASGN---GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
                 KA+G    G IV  SS AG+        YG     +  LT        +  +RA
Sbjct: 134 YWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRA 193

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+I P   RT+++  +  D A +    G+        P  P+ V  LV FL  PAA+ + 
Sbjct: 194 NAICPRA-RTAMTADVFGD-APDVEAGGI-------DPLSPEHVVPLVQFLASPAAAEVN 244

Query: 246 GQVICVDGGM 255
           GQV  V G M
Sbjct: 245 GQVFIVYGPM 254

Length = 306

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 70/246 (28%), Positives = 106/246 (43%), Gaps = 20/246 (8%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG  R IG AI  +LA  GF   +H  +R++ E      E +  G +      DL+  
Sbjct: 13  LVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADLADE 71

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
            +   L+   S+   G + LLVNNA++     A   T        +TN  + F L++   
Sbjct: 72  AEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFA 130

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSI 188
             L A   G++V   ++       L P +  Y     A+   T+ L    A   IR N+I
Sbjct: 131 RALPADARGLVV---NMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAI 186

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG    S     R  P          + TP+ R   P+E+++ V +L   A S +TGQ+
Sbjct: 187 GPGPTLPS----GRQSPED---FARQHAATPLGRGSTPEEIAAAVRYL-LDAPS-VTGQM 237

Query: 249 ICVDGG 254
           I VDGG
Sbjct: 238 IAVDGG 243

Length = 258

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 74.2 bits (182), Expect = 3e-15
 Identities = 74/251 (29%), Positives = 110/251 (43%), Gaps = 26/251 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGS-----VCDLS 69
           +TG  RGIG  I   L   G         Q  L +  +E   K  K  G        D++
Sbjct: 15  VTGAARGIGLGIAAWLIAEGW--------QVVLADLDRERGSKVAKALGENAWFIAMDVA 66

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPK----EALDTTAEYMSTLRSTNFESVFH 125
              Q    +  V   F G+L+ LV NAA+A P     E+L     + + + + N      
Sbjct: 67  DEAQVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESLSLA--HWNRVLAVNLTGPML 123

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           L+K   P L+A  NG IV ++S     + P T  Y    G +  LT  L      + IR 
Sbjct: 124 LAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRV 181

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+++PG I        R +P    + E   ++ P  R G  ++V+++VA+L    A ++T
Sbjct: 182 NAVSPGWIDARDPSQRRAEP----LSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVT 237

Query: 246 GQVICVDGGMT 256
           GQ   VDGGMT
Sbjct: 238 GQEFVVDGGMT 248

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 5e-15
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 22/241 (9%)

Query: 21  GIGHAIVEELAGFGAI-----IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQRE 75
           GIG A        GA      IH   R   E  + L   +L   +V   VCD++S  Q +
Sbjct: 29  GIGSATARRALEEGARVVISDIHE--RRLGETADELAA-ELGLGRVEAVVCDVTSEAQVD 85

Query: 76  KLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK 135
            L++       G+L++LVNNA +      +D T +  S +        F  ++ A   ++
Sbjct: 86  ALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMR 144

Query: 136 ASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           A G  G+IV  +SV G  A      Y      +  LT+    E A+  +R N++AP    
Sbjct: 145 ARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAP---- 200

Query: 195 TSLSDAIRHD----PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            S++    H         ++++ L +R    R  EP EV++++AFL    +SY+TG+V+ 
Sbjct: 201 -SIA---MHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVS 256

Query: 251 V 251
           V
Sbjct: 257 V 257

Length = 262

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 6e-15
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 7/188 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           +TG T GIG A  EELA  G  +   SR Q +L+   +E + K G++      D S+ + 
Sbjct: 6   VTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAGDD 65

Query: 74  R-EKLMETVSSIFQGKLNLLVNNAAVA--VPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
             E++ + +  +  G   +LVNN  ++  +P+  L+T  + +  + + N  +   +++L 
Sbjct: 66  IYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLI 122

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P +     G IV ISS AG+   PL   Y      ++  ++ L  E     I   S+ P
Sbjct: 123 LPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLP 182

Query: 191 GVIRTSLS 198
            ++ T +S
Sbjct: 183 YLVATKMS 190

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 74/276 (26%), Positives = 110/276 (39%), Gaps = 57/276 (20%)

Query: 18  GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKL 77
           G  GIG AI   + G G  +     N+  L    +  +  G  V+    D+SSRE  + L
Sbjct: 9   GAGGIGQAIARRV-GAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKAL 67

Query: 78  METVSSIFQGKLNLLVNNAAVA---VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             T  ++  G +  LV+ A V+      EA+     Y + L    F  V          +
Sbjct: 68  AATAQTL--GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKV----------I 115

Query: 135 KASGNGIIVFISSVAGVTAAPLT------------------PLYGPYN----GAMNQLTK 172
              G G++  I+S +G     LT                  P   P          Q+ K
Sbjct: 116 APGGAGVV--IASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAK 173

Query: 173 ---HLE-----CEQAKDNIRANSIAPGVIRTSLS----DAIRHDPAKNKIVEGLVSRTPI 220
               L       +  +   R NSI+PG+I T L+    +  R D  +N     + +++P 
Sbjct: 174 RANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRN-----MFAKSPA 228

Query: 221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT 256
            RPG PDE+++L  FL  P  S+ITG    VDGG T
Sbjct: 229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 39/271 (14%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVC 66
             +   ITG    IG A+V+ +   G I+     ++  LNE L+    + K  K++    
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVP------KEALDTTAEYMSTLRSTNF 120
           D++ +E  E+ +   +  + GK++  VN A    P      K+  D + +  +   S + 
Sbjct: 63  DITDQESLEEFLSKSAEKY-GKIDGAVNCA---YPRNKDYGKKFFDVSLDDFNENLSLHL 118

Query: 121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG--------------A 166
            S F  S+      K  G G +V ISS+ GV A    P +  Y G               
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVA----PKFEIYEGTSMTSPVEYAAIKAG 174

Query: 167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP 226
           +  LTK+L       NIR N ++PG I  +  +A  +   K    +G++         +P
Sbjct: 175 IIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGML---------DP 225

Query: 227 DEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           D++   + FL    + YITGQ I VD G ++
Sbjct: 226 DDICGTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 11/192 (5%)

Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            ITG + GIG A     A  G+   +   +R+Q  L     E +  G+K      DLS+ 
Sbjct: 10  LITGASSGIGKATALAFAKAGWDLAL--VARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E     +  +   F G  ++L+NNA +A     L+        +   N  SVF       
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSI 188
           P ++A G G+I+ +SS+A   A    P +G Y     A+   TK L  E+    IR  +I
Sbjct: 127 PGMRARGGGLIINVSSIAARNA---FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 189 APGVIRTSLSDA 200
             G + T L D 
Sbjct: 184 TLGAVNTPLWDT 195

Length = 241

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 42/197 (21%), Positives = 66/197 (33%), Gaps = 19/197 (9%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
             Q   ITG + G+G A     A  GA +   +R +  L     E +  G +    V D+
Sbjct: 7   GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADV 66

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           +  E  +   +       G ++  VNNA V V     D T E    +    +  V H + 
Sbjct: 67  ADAEAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH----------LECEQ 178
            A   ++    G I+ + S     +    PL   Y  A     KH           E   
Sbjct: 126 AALRHMRPRDRGAIIQVGSALAYRS---IPLQSAYCAA-----KHAIRGFTDSLRCELLH 177

Query: 179 AKDNIRANSIAPGVIRT 195
               +    + P  + T
Sbjct: 178 DGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK-VTGSVCDLSSREQ 73
           +TG + GIG A  E+LA  G  +   SRN           +   +  V     D++    
Sbjct: 9   VTGASSGIGRATAEKLARAGYRVFGTSRNPA---------RAAPIPGVELLELDVTDDAS 59

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++ V +   G++++LVNNA V +   A +++      L  TN   +  +++   P 
Sbjct: 60  VQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH 118

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++A G+G I+ ISSV G   AP   LY     A+   ++ L+ E  +  IR + + P   
Sbjct: 119 MRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYT 178

Query: 194 RTSL 197
           +T+ 
Sbjct: 179 KTNF 182

Length = 270

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
            ++   +TG + GIG A+ E LA  GA +    RN  +L E L        +    V DL
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-EALAARLPYPGRHRWVVADL 62

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHL 126
           +S   RE ++     +  G +N+L+NNA V     AL  D   E +  L + N  +   L
Sbjct: 63  TSEAGREAVLARAREM--GGINVLINNAGVN--HFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++   PLL+A  + ++V + S  G    P    Y     A+   ++ L  E A   +R  
Sbjct: 119 TRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVL 178

Query: 187 SIAPGVIRTSLSDA 200
            +AP   RT+++  
Sbjct: 179 YLAPRATRTAMNSE 192

Length = 263

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 24/202 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG +RGIG AI  ELA     +    R    L+E   E  L G   T    DL+     
Sbjct: 8   ITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAE--LPG--ATPFPVDLT---DP 59

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E +   V  +  G+L++LV+NA VA      ++T +        N  +   L++L  P L
Sbjct: 60  EAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPAL 117

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIAPG 191
           +A+  G +VFI+S AG+ A    P +G Y     A+  L   L  E+   N+R  S+ PG
Sbjct: 118 RAAH-GHVVFINSGAGLRA---NPGWGSYAASKFALRALADALREEEP-GNVRVTSVHPG 172

Query: 192 VIRTSLSDAIR------HDPAK 207
              T +   +       +DP +
Sbjct: 173 RTDTDMQRGLVAQEGGEYDPER 194

Length = 227

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 68.5 bits (167), Expect = 5e-13
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 15/247 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTC-----SRNQTELNERLQEWKLKGLKVTGSVCDL 68
            +TGG  GIG A     A  GA +          +  ++ + ++E   K + + G   DL
Sbjct: 53  LVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPG---DL 109

Query: 69  SSREQREKLMETVSSIFQGKLNL-LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           S  +    L+        G   + LV    VA+P  A D T+E      + N  ++F L+
Sbjct: 110 SDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIA-DLTSEQFQKTFAINVFALFWLT 168

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           + A PLL    +  I+  SS+     +P    Y     A+   ++ L  + A+  IR N 
Sbjct: 169 QEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNI 226

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I T+L   I     ++KI +    +TP+ R G+P E++ +  +L    +SY+T +
Sbjct: 227 VAPGPIWTALQ--ISGGQTQDKIPQ-FGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE 283

Query: 248 VICVDGG 254
           V  V GG
Sbjct: 284 VHGVCGG 290

Length = 294

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 67.6 bits (165), Expect = 5e-13
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 16/202 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV-CDL--SS 70
            +TG ++G+G  + +  A  GA +   +R+Q +L +        G     ++  DL  + 
Sbjct: 10  LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAE 69

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSK 128
            ++ E+   T++   QGKL+ +V+ A        LD  T AE+++  R  N  +   L++
Sbjct: 70  EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYR-INTVAPMGLTR 128

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE-QAKDNIRANS 187
              PLLK S +  ++F+    G T       +G    A+N L K    E +   N+RAN 
Sbjct: 129 ALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANV 188

Query: 188 IAPGVIRTSLSDAIRHDPAKNK 209
           + PG I         + P + K
Sbjct: 189 LVPGPI---------NSPQRIK 201

Length = 239

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 30/260 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSV-CDLSSRE 72
           +TGG  GIG +IV      GA +  C  + Q +L + + +  L G        CD++  +
Sbjct: 23  VTGGATGIGESIVRLFHKHGAKV--CIVDLQDDLGQNVCD-SLGGEPNVCFFHCDVTVED 79

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRST---NFESVFHLSKL 129
              + ++     F G L+++VNNA +  P    D     +S        N + VF   K 
Sbjct: 80  DVSRAVDFTVDKF-GTLDIMVNNAGLTGPP-CPDIRNVELSEFEKVFDVNVKGVFLGMKH 137

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP--YNG---AMNQLTKHLECEQAKDNIR 184
           A  ++     G IV + SVA           GP  Y G   A+  LT+ +  E  K  IR
Sbjct: 138 AARIMIPLKKGSIVSLCSVASAIGG-----LGPHAYTGSKHAVLGLTRSVAAELGKHGIR 192

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS-RTPICRPGE-------PDEVSSLVAFL 236
            N ++P  + T+L  A+ H P   +  + L   R    +           D+V++ V FL
Sbjct: 193 VNCVSPYAVPTAL--ALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL 250

Query: 237 CFPAASYITGQVICVDGGMT 256
               A YI+G  + +DGG T
Sbjct: 251 ASDEARYISGLNLMIDGGFT 270

Length = 280

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 14/186 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG A+ +     G  +   +R   ++ E L       +++     D++    
Sbjct: 5   LITGCSSGIGRALADAFKAAGYEVWATARKAEDV-EALAAAGFTAVQL-----DVNDGAA 58

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L E + +   G L++L+NNA        LD   E M     TN  +V  +++   PL
Sbjct: 59  LARLAEELEAEHGG-LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPL 117

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPY---NGAMNQLTKHLECEQAKDNIRANSIAP 190
           L+    G++V I SV+GV    +TP  G Y     A++ L+  L  E A   ++   + P
Sbjct: 118 LR-RSRGLVVNIGSVSGVL---VTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQP 173

Query: 191 GVIRTS 196
           G I + 
Sbjct: 174 GAIASQ 179

Length = 274

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ++ FITG   GIG A     A  G  +     N+  L     E        TG++ D++ 
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNA-WTGAL-DVTD 59

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVA-------VPKEALDTTAEYMSTLRSTNFESV 123
           R   +  +   ++   G+L++L NNA +        +P EA D   +        N + V
Sbjct: 60  RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVID-------INVKGV 112

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
            + +  A P LKA+    ++  SS + +   P   +Y     A+  LT+ L+ E  +  I
Sbjct: 113 LNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGI 172

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP 219
           R   + P  + T++ D   ++          V  TP
Sbjct: 173 RVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTP 208

Length = 260

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 65.4 bits (159), Expect = 5e-12
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 26/265 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL-----NERLQEWKLKGLKVTGS---- 64
           F+ G    I   I E    +G I   C     EL      ++L+E   K      S    
Sbjct: 3   FLQGKKILITGMISERSIAYG-IAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVF 61

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE--- 121
            CD++S ++  ++   +   + G L+ LV++   A PKEAL  + +++ ++    F    
Sbjct: 62  RCDVASDDEINQVFADLGKHWDG-LDGLVHSIGFA-PKEAL--SGDFLDSISREAFNTAH 117

Query: 122 -----SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
                S+  L+K A P+++   N  IV +S +  V A P   + G    ++    +    
Sbjct: 118 EISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAA 176

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
              K+ IR N I+ G I+T  +  I       K++  + +  P+ R    +EV +  AFL
Sbjct: 177 CLGKEGIRCNGISAGPIKTLAASGI---ADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFL 233

Query: 237 CFPAASYITGQVICVDGGMTVNGFN 261
               +S ITG++  VDGG ++N  +
Sbjct: 234 LSDLSSGITGEITYVDGGYSINALS 258

Length = 261

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 29/249 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAII---------HTCSRNQTELNERLQEWKLKGLKVTGSV 65
           +TG   G+G A     A  GA +             ++ +  ++ + E K  G K   +V
Sbjct: 10  VTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK---AV 66

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
            +  S E  EK+++T    F G++++LVNNA +   +     + E    +   + +  F 
Sbjct: 67  ANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKGSFK 125

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           +++ A P ++    G I+  SS AG+        Y      +  L+  L  E AK NI  
Sbjct: 126 VTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYNITC 185

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+IAP    + +++ +  +   + +              +P+ V+ LV +LC   +  +T
Sbjct: 186 NTIAPAA-GSRMTETVMPEDLFDAL--------------KPEYVAPLVLYLC-HESCEVT 229

Query: 246 GQVICVDGG 254
           G +  V  G
Sbjct: 230 GGLFEVGAG 238

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 9/200 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   G G A     A  G  +      Q  L+  + E + +G +V G   D+S   Q 
Sbjct: 11  ITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQV 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E L +     F G ++LL NNA V       + +      +   N   V H  +   PL+
Sbjct: 71  EALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLM 129

Query: 135 KASG------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRAN 186
            A+        G IV  +S+AG+ A P   +Y     A+  LT+ L  +     D + A+
Sbjct: 130 LAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS 189

Query: 187 SIAPGVIRTSLSDAIRHDPA 206
            + P  + T +  + R+ PA
Sbjct: 190 VLCPYFVPTGIWQSERNRPA 209

Length = 287

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 24/195 (12%)

Query: 14  FITGGTRGIGHAIVEELAGFGAI-IHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLS 69
            +TG  RGIG A VE+L   GA  ++  +R+    T+L  R+   +L          D++
Sbjct: 10  LVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQL----------DVT 59

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS---TNFESVFHL 126
                    E  S +      +LVNNA +      L         LR+   TN+     +
Sbjct: 60  DPASVAAAAEAASDV-----TILVNNAGIFRTGSLLLEGD--EDALRAEMETNYFGPLAM 112

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++   P+L A+G G IV + SV      P    Y     A   LT+ L  E A    R  
Sbjct: 113 ARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVL 172

Query: 187 SIAPGVIRTSLSDAI 201
            + PG I T ++  +
Sbjct: 173 GVHPGPIDTDMAAGL 187

Length = 238

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 27/206 (13%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSR 71
             ITG ++G+G AI  +L   G  + + SR +   N+ L +  +     +T    DL   
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTE---NKELTKLAEQYNSNLTFHSLDLQDV 60

Query: 72  EQREKLMETV-SSIFQGKLN--LLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLS 127
            + E     + SSI +  ++   L+NNA +  P K      +E           +  HL+
Sbjct: 61  HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESE--------ELITNVHLN 112

Query: 128 KLAHPLLKA---------SGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
            LA  +L +           +  ++ ISS A          Y      ++  T+ +  EQ
Sbjct: 113 LLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQ 172

Query: 179 AKDNIRANSIA--PGVIRTSLSDAIR 202
            ++      +A  PGV+ T++   IR
Sbjct: 173 EEEEYPVKIVAFSPGVMDTNMQAQIR 198

Length = 251

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 62.2 bits (151), Expect = 4e-11
 Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 22/239 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDL--SSR 71
           +TG + GIG       A +GA +    RN+ +L +         G +    + DL   + 
Sbjct: 9   VTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCTS 68

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLA 130
           E  ++L + ++  +  +L+ +++NA +      L +   +    +   N  + F L++  
Sbjct: 69  ENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQAL 127

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            PLL  S  G +VF SS  G         Y     A   L + L  E  + N+R N I P
Sbjct: 128 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCINP 187

Query: 191 GVIRTSL--SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           G  RT++  S     DP K K                P ++  L  +L    +   TG 
Sbjct: 188 GGTRTAMRASAFPTEDPQKLK---------------TPADIMPLYLWLMGDDSRRKTGM 231

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 62.6 bits (152), Expect = 4e-11
 Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 40/271 (14%)

Query: 15  ITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLS- 69
           +TG  + IG +I   L   G+  ++H            L          +   C  DLS 
Sbjct: 6   VTGAAKRIGSSIAVALHQEGYRVVLHY--HRSAAAASTLAAELNARRPNSAVTCQADLSN 63

Query: 70  SREQREKLMETVSSIFQ--GKLNLLVNNAAVAVP--------------KEALDTTAEYMS 113
           S     +    + + F+  G+ ++LVNNA+   P              K++L+      +
Sbjct: 64  SATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQV---A 120

Query: 114 TLRSTNFESVFHLSK-LAHPLLKASGNGIIVFISSVAGVTAAPLTPL--YGPYN---GAM 167
            L  +N  + + L K  A              +S V    A    PL  +  Y     A+
Sbjct: 121 ELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHAL 180

Query: 168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEP 226
             LT+    E A   IR N +APG+  + L DA+   P + +  E    + P+  R    
Sbjct: 181 EGLTRSAALELAPLQIRVNGVAPGL--SLLPDAM---PFEVQ--EDYRRKVPLGQREASA 233

Query: 227 DEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           ++++ +V FL  P A YITG  I VDGG+++
Sbjct: 234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 4/199 (2%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
             FITG   GIG       A  G  +     ++  L     E  L    V     D++ R
Sbjct: 2   AIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAE--LGAENVVAGALDVTDR 59

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
                 +   ++   G+L+ L NNA V       D        +   N + V + +  A 
Sbjct: 60  AAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAAL 119

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P LKA+    ++  +S + +   P   +Y     A+  LT+ L+ E A+  IR   + P 
Sbjct: 120 PYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPW 179

Query: 192 VIRTSLSDAIRH--DPAKN 208
            + T +         P K 
Sbjct: 180 FVDTPILTKGETGAAPKKG 198

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 19/254 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFG---AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           + GG + +G  +   LA  G   A+    S     + + +     +G    G   D +S 
Sbjct: 7   VIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFGADATSE 65

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF----HLS 127
           +    L   V  IF G+++LLV NA +A      D            N    F      S
Sbjct: 66  QSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFS 124

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           +L   +++    G I+ I+S +G   +     Y         LT+ L  + A+  I  +S
Sbjct: 125 RL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHS 181

Query: 188 IAPGVIRTS-----LSD--AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           +  G +  S     L    A +     +++ +  + + P+ R  +  +V +++ F   P 
Sbjct: 182 LMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK 241

Query: 241 ASYITGQVICVDGG 254
           ASY TGQ I V GG
Sbjct: 242 ASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR--TPICRPGEPDEVSSLVAFLCFPA 240
           IR N +APG + T +    R     + + +  V      + RP   DE ++++ FLC  A
Sbjct: 161 IRVNCVAPGPVFTPILGDFR-----SMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA 215

Query: 241 ASYITGQVICVDGGM 255
           A +I G  + VDGG+
Sbjct: 216 ARWINGVNLPVDGGL 230

Length = 241

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-----DTTAEYMSTLRSTNF 120
            D+S  E  + L E++     GK++ +V++ A A PKEAL     +T+ E  +     + 
Sbjct: 62  LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFA-PKEALEGSFLETSKEAFNIAMEISV 119

Query: 121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
            S+  L++   PLL  +    ++ +S + GV   P   + G    A+    ++L  +  K
Sbjct: 120 YSLIELTRALLPLL--NDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGK 177

Query: 181 DNIRANSIAPGVIRTSLSDAI---RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
             IR N+I+ G I+T  +  I   R     N+I        P+ +    +EV +   +L 
Sbjct: 178 KGIRVNAISAGPIKTLAASGIGDFRMILKWNEI------NAPLKKNVSIEEVGNSGMYLL 231

Query: 238 FPAASYITGQVICVDGGMTVNG 259
              +S +TG++  VD G  + G
Sbjct: 232 SDLSSGVTGEIHYVDAGYNIMG 253

Length = 274

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 54/186 (29%), Positives = 76/186 (40%), Gaps = 6/186 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG     EL   G  +    R   ++  R+       L  TG + DL   E 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS-----LGFTGILLDLDDPES 59

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+  + V ++   +L  L NNA   V       + + M    STNF     L+ L  P 
Sbjct: 60  VERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPA 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G G IV  SSV G+ + P    Y     A+   +  L  E     I+ + I PG I
Sbjct: 120 MLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPI 179

Query: 194 RTSLSD 199
           RT  +D
Sbjct: 180 RTRFTD 185

Length = 256

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 4/192 (2%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
            E+ +FITG +RG G A  E     G  +   +R+   L +  +++  + L +   V D 
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD- 60

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
             R      +ET    F G+L+++VNNA   +     + T         TNF     +++
Sbjct: 61  --RAAVFAAVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQ 117

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
              P L+   +G I+ ISS+ G++A P++ +Y     A+  +++ L  E A+  I+   +
Sbjct: 118 AVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLV 177

Query: 189 APGVIRTSLSDA 200
            PG   T  +  
Sbjct: 178 EPGGYSTDWAGT 189

Length = 275

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.4 bits (144), Expect = 6e-10
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 31/195 (15%)

Query: 87  GKLNLLVNNAAVA--VPKEALDTT-AEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIV 143
           G +++LV++ A +  + K  L+T+   Y++ L ++++  V  LS    P++   G+ I  
Sbjct: 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG-PIMNPGGSTIS- 175

Query: 144 FISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA--------KDNIRANSIAPGVIRT 195
            ++ +A + A P       Y G M+     LE +          +  IR N+I+ G + +
Sbjct: 176 -LTYLASMRAVP------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLAS 228

Query: 196 SLSDAIRHDPAKNKIVEGLV----SRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
               AI         +E +V       P+  P E ++V +  AFL  P AS ITG+ + V
Sbjct: 229 RAGKAI-------GFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYV 281

Query: 252 DGGMTVNGFNPTCCP 266
           D G  V G  P   P
Sbjct: 282 DHGANVMGIGPEMFP 296

Length = 299

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 6e-10
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A   ++A  GA +   +RN   L+E + E + KG       CDL+     
Sbjct: 376 ITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAV 435

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS-----KL 129
           +  ++ + +   G ++ LVNNA  ++ +      +   ST R  ++E    ++     +L
Sbjct: 436 DHTVKDILAEH-GHVDYLVNNAGRSIRR------SVENSTDRFHDYERTMAVNYFGAVRL 488

Query: 130 AHPLL---KASGNGIIVFISSVAGVTAAP 155
              LL   +    G +V +SS+   T AP
Sbjct: 489 ILGLLPHMRERRFGHVVNVSSIGVQTNAP 517

Length = 657

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 53/191 (27%), Positives = 74/191 (38%), Gaps = 19/191 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWKLKGLK-VTGSVCDLSS 70
           ITGG RGIG A    LA  GA   I         +L+E L +     L  V G   D++ 
Sbjct: 10  ITGGARGIGLATARALAALGARVAI--------GDLDEALAKETAAELGLVVGGPLDVTD 61

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRST---NFESVFHLS 127
                  ++ V +   G +++LVNNA V      LD         R     N   V   S
Sbjct: 62  PASFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLDEPDA---VTRRILDVNVYGVILGS 117

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           KLA P +   G G +V ++S+AG    P    Y     A+   T     E     +  + 
Sbjct: 118 KLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSV 177

Query: 188 IAPGVIRTSLS 198
           + P  + T L 
Sbjct: 178 VLPSFVNTELI 188

Length = 273

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 25/249 (10%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   I G + G+G+A+       GA +   SRN+ +L +R+++   K   +   V D+SS
Sbjct: 6   KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGDVSS 64

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEY--MSTLRSTNFESVFHLSK 128
            E    ++E  + +        ++   V V     DT  E+  +  + + + +   +   
Sbjct: 65  TESARNVIEKAAKVLNA-----IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVN 119

Query: 129 LAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            +   LK   +  IV +SS++G+  A+P    Y      + +  + L  E     IR N 
Sbjct: 120 ASLRFLKEGSS--IVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNG 177

Query: 188 IAPGVIRTSLSDAIRHDPAKN-KIVEGL-VSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           IAP  I      +   +P +N K +  L     P      P++ + ++ +L    A ++ 
Sbjct: 178 IAPTTI------SGDFEPERNWKKLRKLGDDMAP------PEDFAKVIIWLLTDEADWVD 225

Query: 246 GQVICVDGG 254
           G VI VDGG
Sbjct: 226 GVVIPVDGG 234

Length = 238

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 79  ETVSSIFQGKLNLLVNNAAVA--VPKEALDTTAE-YMSTLRSTNFESVFHLSKLAHPLLK 135
           E+V + F G +++LV++ A    V K  L+T+ + Y++ + ++++  V  L     P++ 
Sbjct: 112 ESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG-PIMN 169

Query: 136 ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA--------KDNIRANS 187
             G  I     S+  + +  + P YG   G M+     LE +          K  IR N+
Sbjct: 170 PGGASI-----SLTYIASERIIPGYG---GGMSSAKAALESDTRVLAFEAGRKYKIRVNT 221

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+ G + +  + AI      + ++E   +  P+ +    DEV +  AFL  P AS ITG 
Sbjct: 222 ISAGPLGSRAAKAIGF---IDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGA 278

Query: 248 VICVDGGMTVNG 259
            I VD G+   G
Sbjct: 279 TIYVDNGLNAMG 290

Length = 303

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 33/261 (12%)

Query: 11  QNYFITG--GTRGIGHAIVEELAGFGA-IIHTCSRNQTELN-ERLQEWKLKGLKVTGSVC 66
           + Y + G    R I   I   L   GA ++ T +  + E     L +  L+G +     C
Sbjct: 8   KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELAD-TLEGQESLLLPC 66

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----STNFE 121
           D++S E+     ET+     G ++ + +  A A  KE  D   E++ T R     + N  
Sbjct: 67  DVTSDEEITACFETIKEEV-GVIHGVAHCIAFA-NKE--DLRGEFLETSRDGFLLAQNI- 121

Query: 122 SVFHLSKLAH---PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           S + L+ +A     L+   G+  IV ++ + G        + G    ++    K+L  + 
Sbjct: 122 SAYSLTAVAREAKKLMTEGGS--IVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDL 179

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAK-----NKIVEGLVSRTPICRPGEPDEVSSLV 233
            KD IR N+I+ G IRT LS       AK     N I++ +  R P+ R    +EV    
Sbjct: 180 GKDGIRVNAISAGPIRT-LS-------AKGVGGFNSILKEIEERAPLRRTTTQEEVGDTA 231

Query: 234 AFLCFPAASYITGQVICVDGG 254
           AFL    +  +TG+ I VD G
Sbjct: 232 AFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 2/189 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG       A  GA +     ++       +  +  G        D+S  +  
Sbjct: 320 VTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAM 379

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E   E V +   G  +++VNNA + +    LDT+AE    +   N   V H  +L    +
Sbjct: 380 EAFAEWVRAE-HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQM 438

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
              G  G IV ++S A    +   P Y     A+  L++ L  E A   I   +I PG +
Sbjct: 439 VERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFV 498

Query: 194 RTSLSDAIR 202
            T++    R
Sbjct: 499 DTNIVATTR 507

Length = 582

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKE----ALDTTAEYMSTLRSTNFE 121
           CD++S E  E+   T+     GK++ +V+  A A  +E      DT+ +  +  +  +  
Sbjct: 62  CDVASDESIERAFATIKERV-GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAY 120

Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           S+  ++K A PLL       IV ++      A P   + G    A+    ++L  +  K 
Sbjct: 121 SLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKK 178

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
            IR N+I+ G ++T     I+      K  +   SRT        +EV +  AFL    +
Sbjct: 179 GIRVNAISAGAVKTLAVTGIKGHKDLLKESD---SRTVDGVGVTIEEVGNTAAFLLSDLS 235

Query: 242 SYITGQVICVDGG 254
           + +TG +I VD G
Sbjct: 236 TGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 10/249 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           + GG + +G  +   LA  G  +     N     +   E   + G K  G   D ++ + 
Sbjct: 7   VIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADATNEQS 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L + V  IF  +++LLV +A +A   +  D            N    F  ++    L
Sbjct: 67  VIALSKGVDEIF-KRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREFSKL 125

Query: 134 LKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           +   G  G I+ I+S +G   +     Y         LT+ L  + A+  I  NS+  G 
Sbjct: 126 MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNSLMLGN 185

Query: 193 IRTS--LSDAIRHDPAKNKIVEGLV-----SRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +  S      +     K  I E  V      + P+ R  +  +V +++ F   P ASY T
Sbjct: 186 LLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCT 245

Query: 246 GQVICVDGG 254
           GQ I + GG
Sbjct: 246 GQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 14  FITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            ITG   G G+ + ++L   GF  ++  C        + L+      L+      D++  
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGF-TVLAGCLTKNGPGAKELRRVCSDRLRTL--QLDVTKP 60

Query: 72  EQREKLMETVSSIFQGK-LNLLVNNAAVAVPKEALDTTAEYMSTLRS---TNFESVFHLS 127
           EQ ++  + V      K L  LVNNA +       +     M   R     N      ++
Sbjct: 61  EQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLP--MDDYRKCMEVNLFGTVEVT 118

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K   PLL+ +  G +V +SS+ G    P    Y     A+   +  L  E     ++ + 
Sbjct: 119 KAFLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSI 177

Query: 188 IAPGVIRTSLSD 199
           I PG  +T ++ 
Sbjct: 178 IEPGNFKTGITG 189

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 43/253 (16%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   + GG   +G A+V+     G  +   S +  E  E      +            S 
Sbjct: 2   RVVLVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEEADASIIVLDSD--------SF 51

Query: 71  REQREKLMETVSSIFQGKLNLLVNNA---AVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
            EQ ++++ +V+ +  GK++ L+  A   A    K    +  +    +   N  + F  S
Sbjct: 52  TEQAKQVVASVARLS-GKVDALICVAGGWAGGSAKS--KSFVKNWDLMWKQNLWTSFIAS 108

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ--AKDNIRA 185
            LA   L     G++V   + A +   P    YG    A++QLT+ L  E         A
Sbjct: 109 HLATKHLL--SGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTA 166

Query: 186 NSIAPGVI-----RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           N+I P  +     R ++ DA               S TP       + ++ L+ F    A
Sbjct: 167 NAILPVTLDTPANRKAMPDA-DFS-----------SWTP------LEFIAELILFWASGA 208

Query: 241 ASYITGQVICVDG 253
           A   +G +I V  
Sbjct: 209 ARPKSGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 39/198 (19%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG A    LA  G  ++  +R      ++++   L  L V     D++    
Sbjct: 7   LVTGASSGIGKATARRLAAQGYTVYGAARRV----DKME--DLASLGVHPLSLDVTDEAS 60

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV----AVPKEALDTTAEYMSTLRSTNFE-SVF---H 125
            +  ++T+ +  +G++++LVNNA      A+    +D  A          FE ++F    
Sbjct: 61  IKAAVDTIIAE-EGRIDVLVNNAGYGSYGAIEDVPIDE-ARR-------QFEVNLFGAAR 111

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--------LECE 177
           L++L  P ++A  +G I+ ISS+ G    PL        GA    TK         L  E
Sbjct: 112 LTQLVLPHMRAQRSGRIINISSMGGKIYTPL--------GAWYHATKFALEGFSDALRLE 163

Query: 178 QAKDNIRANSIAPGVIRT 195
            A   I    I PG I+T
Sbjct: 164 VAPFGIDVVVIEPGGIKT 181

Length = 273

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 65/263 (24%), Positives = 101/263 (38%), Gaps = 50/263 (19%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-----------------IIHTCSRNQTELNERLQEWKL 56
           FITG +RGIG AI    A  GA                  IHT +    E+         
Sbjct: 10  FITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE---EIEAA------ 60

Query: 57  KGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR 116
            G +    V D+   +Q    +      F G +++ VNNA+        DT  +    ++
Sbjct: 61  -GGQALPLVGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQ 118

Query: 117 STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKH 173
             N    F +S+   P LK S N  I+ +S    +      P +  Y  A   M+  T  
Sbjct: 119 QINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP-HTAYTMAKYGMSLCTLG 177

Query: 174 LECEQAKDNIRANSIAPGVIRTSL-SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSS- 231
           L  E   D I  N++ P   RT++ + A+R+    ++ +    SRTP        E+ + 
Sbjct: 178 LAEEFRDDGIAVNALWP---RTTIATAAVRNLLGGDEAMRR--SRTP--------EIMAD 224

Query: 232 -LVAFLCFPAASYITGQ-VICVD 252
                L  PA  + TG  +I  +
Sbjct: 225 AAYEILSRPAREF-TGNFLIDEE 246

Length = 273

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 54.4 bits (132), Expect = 7e-09
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 27/156 (17%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAI-IHTCSRN---QTELNERLQEWKLKGLKVTGSVCDL 68
           Y ITGG  G+G A+   LA  GA  +   SR+          L E +  G +VT   CD+
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDV 62

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF---- 124
           + R+    ++  + ++  G L  +++ A V         T E         F +V     
Sbjct: 63  ADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPE--------RFAAVLAPKA 113

Query: 125 ----HLSKLAHPL-LKASGNGIIVFISSVAGVTAAP 155
               +L +L   L L        V  SS+AGV  +P
Sbjct: 114 AGAWNLHELTADLPLDF-----FVLFSSIAGVLGSP 144

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 41/182 (22%), Positives = 66/182 (36%), Gaps = 27/182 (14%)

Query: 17  GGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREK 76
           G T  IG A+ + L+  G  + T  R+  +                    D++     + 
Sbjct: 5   GATGTIGLAVAQLLSAHGHEVITAGRSSGDYQ-----------------VDITDEASIKA 47

Query: 77  LMETVSSIFQGKLNLLVNNAAVAVPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK 135
           L E V     G  + +V+ A  A     A  T A++   L S     +  L +   P L 
Sbjct: 48  LFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQIN-LVRHGLPYL- 100

Query: 136 ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT 195
            +  G I   S +      P        NGA+    +    E  +  IR N+++PGV+  
Sbjct: 101 -NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRINAVSPGVVEE 158

Query: 196 SL 197
           SL
Sbjct: 159 SL 160

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 2/182 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG A  E  A  GA +   +R++  L    +E +  G +V     D++  +Q 
Sbjct: 12  ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQV 71

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           + L    +S F G++++ VNN  V       +T  E    +  TN       +  A P+ 
Sbjct: 72  KALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIF 130

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD-NIRANSIAPGVI 193
           K  G+GI + + S+ G  A P    Y      +   ++ L  E A   +I    + P  +
Sbjct: 131 KKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFM 190

Query: 194 RT 195
            T
Sbjct: 191 DT 192

Length = 330

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 31/222 (13%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGS------ 64
           +++ ITG   GIG A    +A  G  +H   RNQ     R +E + +    +G+      
Sbjct: 2   RSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQ----TRAEEARKEIETESGNQNIFLH 57

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF 124
           + D+S  +Q  + +E      + KL++L+NNA   V K  L  T + +    +TN    +
Sbjct: 58  IVDMSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKREL--TEDGLEKNFATNTLGTY 114

Query: 125 HLSKLAHPLLKASGNGIIVFISS----VAGVTAAPLTPLYGPYNGAM-------NQLTKH 173
            L+    P+L+   +  ++ +SS    V  +    L      ++G M        Q+   
Sbjct: 115 ILTTHLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMT 174

Query: 174 LECEQAKDNIRANSIAPG-----VIRTSLSDAIRHDPAKNKI 210
            +  +    I  + + PG      +R S+ D   H   K+++
Sbjct: 175 EQWAKKHPEIHFSVMHPGWADTPAVRNSMPDF--HARFKDRL 214

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSS 70
              I G +RG+G  +V+ L   G  +    R         Q+  L+ L  V     D++ 
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ------QDTALQALPGVHIEKLDMND 56

Query: 71  REQREKLMETVSSIFQGK-LNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLS 127
               ++L++ +    QG+  +LL  NA ++ P  + A D TA  +  L  TN  +   L+
Sbjct: 57  PASLDQLLQRL----QGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLA 112

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLT---PLYGPYNGAMNQLTKHLECEQAKDNIR 184
           +     ++  G G++ F+SS  G    P     PLY     A+N +T+    E  +  + 
Sbjct: 113 RRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLT 171

Query: 185 ANSIAPGVIRT 195
             S+ PG ++T
Sbjct: 172 VLSMHPGWVKT 182

Length = 225

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE---- 121
           CD++S EQ + L  ++   + G L+ LV++   A P+EA+    +++  L   NF     
Sbjct: 63  CDVASDEQIDALFASLGQHWDG-LDGLVHSIGFA-PREAI--AGDFLDGLSRENFRIAHD 118

Query: 122 ----SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
               S   L+K A P+L  S +  ++ +S +      P     G    ++    ++L   
Sbjct: 119 ISAYSFPALAKAALPML--SDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVS 176

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
                IRAN I+ G I+T  +  I+        VE   S  P+ R    +EV ++ AFL 
Sbjct: 177 LGPKGIRANGISAGPIKTLAASGIKDFGKILDFVE---SNAPLRRNVTIEEVGNVAAFLL 233

Query: 238 FPAASYITGQVICVDGGMTVNG 259
              AS +TG++  VD G     
Sbjct: 234 SDLASGVTGEITHVDSGFNAVV 255

Length = 260

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 8/160 (5%)

Query: 88  KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS 147
           + +++V+NAA+      +D T   +      N      L + A  L+KA   G  + ISS
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISS 90

Query: 148 VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK 207
           VAG+  AP    Y     A++ L +    E   + + A ++A G    S           
Sbjct: 91  VAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSG-----MAKGP 145

Query: 208 NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
               E L +R    R   P+EV+  +            G 
Sbjct: 146 VAPEEILGNRRHGVRTMPPEEVARALLNA---LDRPKAGV 182

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 49/267 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGA---IIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           I GG + +G  I  +LA  GA    IH  S  ++ +  E +   K  G K      DL++
Sbjct: 13  IAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT 72

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEY--MSTLRSTNFESVFHLS 127
               EKL +   + F G+ ++ +N     + K  ++ + AEY  M  + S          
Sbjct: 73  AAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNS---------- 121

Query: 128 KLAHPLLKASG-----NGIIVFISSVAGVTA--APLTPLYGPYNG---AMNQLTKHLECE 177
           K A   +K +G     NG IV +     VT+     TP Y  Y G    +   T+    E
Sbjct: 122 KSAFFFIKEAGRHLNDNGKIVTL-----VTSLLGAFTPFYSAYAGSKAPVEHFTRAASKE 176

Query: 178 QAKDNIRANSIAPGVIRTSL------SDAIRHDPAKNKIVEGLVSRTPICRPG--EPDEV 229
                I   ++ PG + T        ++A+    A +K    L   +P  + G  + +++
Sbjct: 177 FGARGISVTAVGPGPMDTPFFYPQEGAEAV----AYHKTAAAL---SPFSKTGLTDIEDI 229

Query: 230 SSLVAFLCFPAASYITGQVICVDGGMT 256
              + FL      +ITGQ I ++GG T
Sbjct: 230 VPFIRFLV-TDGWWITGQTILINGGYT 255

Length = 257

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 53.4 bits (128), Expect = 5e-08
 Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 5/192 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG A   E A  GA +     ++  L + +   + +G  V G +CD+  RE+ 
Sbjct: 11  ITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEV 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP-L 133
             L +    +  G ++++ +NA + V    ++ T +    +   +     H  +   P L
Sbjct: 71  THLADEAFRLL-GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRL 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+    G +VF +S AG+        YG     +  L + L  E   D I  + + P V+
Sbjct: 130 LEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVV 189

Query: 194 RTSL---SDAIR 202
            T+L   S+ IR
Sbjct: 190 ETNLVANSERIR 201

Length = 275

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 20/210 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN---ERLQEWKLKGLKVTGSVCDLSS 70
            +TG  RGIG  +   L   GA +      + EL      L     + L V   V DL++
Sbjct: 13  VVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAA 71

Query: 71  -----REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
                 E  E+          G ++++V NA +A          +    +   N   VFH
Sbjct: 72  MQAAAEEAVERF---------GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFH 122

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             +   P L     G ++ +SS+A   AAP    Y      +      L  E A   +  
Sbjct: 123 TVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181

Query: 186 NSIAPGVIRTSL-SDAIRHDPAKNKIVEGL 214
            S     I T L  DA    PA  ++   L
Sbjct: 182 GSAYLSWIDTDLVRDADADLPAFRELRARL 211

Length = 296

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 7e-08
 Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG A  E+ A  GA +   +R +  L+         G       CDLS  +  
Sbjct: 45  LTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAV 104

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPK---EALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           + L+  V     G +++L+NNA  ++ +   E+LD   +   T+   N+ +   L +   
Sbjct: 105 DALVADVEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTM-VLNYYAPLRLIRGLA 162

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSI 188
           P +   G+G I+ +++  GV +   +PL+  YN    A++ +++ +E E     + + ++
Sbjct: 163 PGMLERGDGHIINVAT-WGVLSE-ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTL 220

Query: 189 APGVIRT 195
              ++ T
Sbjct: 221 YYPLVAT 227

Length = 293

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLSSRE 72
           F+TG   GIG A    LA  GA +    R+   L + + + +  G  V      D+S  +
Sbjct: 4   FVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD 63

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH-LSKLAH 131
                   + +   G +++++N A ++        T E    +   N     H +     
Sbjct: 64  AVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVP 122

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P++ A   G +V +SS AG+ A P    Y      +  L++ L  + A+  I  + + PG
Sbjct: 123 PMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPG 182

Query: 192 VIRTSLSDAI------RHDPAKNKIVE 212
            ++T L + +      R DP   K V+
Sbjct: 183 AVKTPLVNTVEIAGVDREDPRVQKWVD 209

Length = 272

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 43/204 (21%), Positives = 91/204 (44%), Gaps = 17/204 (8%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE---- 121
           CD++     + +   +  ++  K +  V++   A P + LD   +Y++ +    F+    
Sbjct: 63  CDVAEDASIDAMFAELGKVWP-KFDGFVHSIGFA-PGDQLD--GDYVNAVTREGFKIAHD 118

Query: 122 ----SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
               S   ++K    +L       ++ +S +    A P   + G    ++    +++   
Sbjct: 119 ISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANA 176

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
              + +R N+I+ G IRT  +  I+      K++    + TPI R    ++V +  AFLC
Sbjct: 177 MGPEGVRVNAISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC 233

Query: 238 FPAASYITGQVICVDGGMTVNGFN 261
              ++ I+G+V+ VDGG ++   N
Sbjct: 234 SDLSAGISGEVVHVDGGFSIAAMN 257

Length = 262

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 38/209 (18%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKV---TGSVCDLSS 70
           FITG + GIG A+  E A  GA +   +R    L            +V      V D  +
Sbjct: 6   FITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADA 64

Query: 71  REQREKLMETVSSIF---QGKLNLLVNNAAVAV-----PKEALDTTAEYMSTLRSTNFES 122
                  +   ++ F    G  ++++ NA ++V      +E L    E M T       +
Sbjct: 65  -------LAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDT-------N 110

Query: 123 VFHLSKLAHPLL---KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC--- 176
            F +     P +   +A+  G +V I+SVAGV      P  G Y+ +     K+LE    
Sbjct: 111 YFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG---LPGAGAYSASKAAAIKYLESLRV 167

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDP 205
           E     +R  +IAPG IRT ++    H+P
Sbjct: 168 ELRPAGVRVVTIAPGYIRTPMT---AHNP 193

Length = 257

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 61/256 (23%), Positives = 93/256 (36%), Gaps = 52/256 (20%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV-CDLS--SR 71
           +TG   GIG       A  GA +    R + +L     E +  G      +  DL   + 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATP 76

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAA---VAVPKEALDTT--AEYMSTLRSTNFESVFHL 126
           +  ++L +T+   F G+L+ +++NA       P E  D     + M      N  + F L
Sbjct: 77  QNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQV----NVNATFML 131

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY-------NGAMNQLTKHLECEQA 179
           ++   PLL  S    +VF SS  G         +G Y        G M  L    E +  
Sbjct: 132 TQALLPLLLKSPAASLVFTSSSVGRQG---RANWGAYAVSKFATEGMMQVLAD--EYQGT 186

Query: 180 KDNIRANSIAPGVIRTSLSDAIR------HDPAKNKIVEGLVSRTPICRPGEPDEVSSLV 233
             N+R N I PG  RT++    R       DP K K                P+++  L 
Sbjct: 187 --NLRVNCINPGGTRTAM----RASAFPGEDPQKLKT---------------PEDIMPLY 225

Query: 234 AFLCFPAASYITGQVI 249
            +L    +    GQ  
Sbjct: 226 LYLMGDDSRRKNGQSF 241

Length = 247

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 10/211 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            +TG T G G  I       G  +    R Q    ERLQE K + G  +  +  D+ +R 
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRNRA 59

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHLSKLAH 131
             E+++ ++ + ++  +++LVNNA +A+  E A   + E   T+  TN + + ++++   
Sbjct: 60  AIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +    +G I+ I S AG        +YG     + Q + +L  +     +R   I PG
Sbjct: 119 PGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPG 178

Query: 192 VIRTSLSDAIRH--DPAK-NKIVEGLVSRTP 219
           ++  +    +R   D  K  K  +  V+ TP
Sbjct: 179 LVGGTEFSNVRFKGDDGKAEKTYQNTVALTP 209

Length = 248

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 19/203 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGA----IIHTCSRN---QTELNERLQEWKLKGLKVTG-SVC 66
           ITG + GIG  +   LA   +    +  T  R+   +  L E         L+     VC
Sbjct: 5   ITGCSSGIGLHLAVRLASDPSKRFKVYATM-RDLKKKGRLWEAAGALAGGTLETLQLDVC 63

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVF 124
           D       + +   V  + +  +++LV NA V +  P EAL   A  M+++   N     
Sbjct: 64  D------SKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDA--MASVFDVNVFGTV 115

Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
            + +   P +K  G+G I+  SSV G+   P   +Y     A+  L + L  +    N+ 
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVH 175

Query: 185 ANSIAPGVIRTSLSDAIRHDPAK 207
            + I  G + T+  + +   P +
Sbjct: 176 LSLIECGPVHTAFMEKVLGSPEE 198

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 49/186 (26%), Positives = 73/186 (39%), Gaps = 14/186 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            ITG + GIG      L   G  +  TC + +      L+   L+  ++     D +  E
Sbjct: 8   LITGCSSGIGAYCARALQSDGWRVFATCRKEEDV--AALEAEGLEAFQL-----DYAEPE 60

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               L+  V  +  G+L+ L NN A   P    D   E +      NF     L++   P
Sbjct: 61  SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIP 120

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIA 189
           +++  G G IV  SS+ G+         G YN    A+  L+  L  E     I  + I 
Sbjct: 121 VMRKQGQGRIVQCSSILGLVPMKYR---GAYNASKFAIEGLSLTLRMELQGSGIHVSLIE 177

Query: 190 PGVIRT 195
           PG I T
Sbjct: 178 PGPIET 183

Length = 277

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRN---QTELNERLQEWKLKGLKVTGSV----C 66
            +TG + G G     ELA  G ++    RN   Q  L  +  +     L +  ++     
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQ-----LNLQQNIKVQQL 61

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D++ +         +  I  G+++LLVNNA  A      +   E       TN      +
Sbjct: 62  DVTDQNSIHNFQLVLKEI--GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISV 119

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY 163
           ++   P ++   +G I+ ISS++G       P   PY
Sbjct: 120 TQAVLPYMRKQKSGKIINISSISGRVG---FPGLSPY 153

Length = 280

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 50.4 bits (121), Expect = 8e-07
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 11/145 (7%)

Query: 13  YFITGGTRGIGHAIVEELA-GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV-----C 66
           Y +TGG  GIG A+   LA  +GA +    R+     E  +   L  L+  G+       
Sbjct: 208 YLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISA 267

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D++      +L+E V   + G ++ +++ A V         TAE    + +   + + +L
Sbjct: 268 DVTDAAAVRRLLEKVRERY-GAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNL 326

Query: 127 SKLAHPLLKASGNGIIVFISSVAGV 151
           ++     L        V  SSV+  
Sbjct: 327 AQ----ALADEPLDFFVLFSSVSAF 347

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 22/244 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG  + IG A+   L   G  +    R      + L++             D S+    
Sbjct: 7   ITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ-----AGAQCIQADFSTNAGI 61

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              ++ +     G L  +++NA+  + ++     A+ ++ +   +  + + L+     LL
Sbjct: 62  MAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLL 120

Query: 135 KASGNGI--IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           +  G+    I+ I+       +     Y     A++ +T     + A   ++ NSIAP +
Sbjct: 121 RGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPAL 179

Query: 193 IRTSLSD--AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           I  +  D  A R   A  K      S   I  PGE +E+  LV +L    + Y+TG+ + 
Sbjct: 180 ILFNEGDDAAYRQK-ALAK------SLLKI-EPGE-EEIIDLVDYLL--TSCYVTGRSLP 228

Query: 251 VDGG 254
           VDGG
Sbjct: 229 VDGG 232

Length = 236

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 20/196 (10%)

Query: 8   SNEQNYFITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           S+ + + ITG + G G A+ +    AG   +     R++    +  +   L   +    +
Sbjct: 2   SSMKTWLITGVSSGFGRALAQAALAAGHRVVG--TVRSEAARAD-FEA--LHPDRALARL 56

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAV---AVPKEALDTTAEYMSTLRSTNFES 122
            D++  +  + ++    + F G +++LVNNA        +E+    AE M      N   
Sbjct: 57  LDVTDFDAIDAVVADAEATF-GPIDVLVNNAGYGHEGAIEESPL--AE-MRRQFEVNVFG 112

Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQA 179
              ++K   P ++A   G IV I+S+ G+   P     G Y G   A+  +++ L  E A
Sbjct: 113 AVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI---GYYCGSKFALEGISESLAKEVA 169

Query: 180 KDNIRANSIAPGVIRT 195
              I   ++ PG  RT
Sbjct: 170 PFGIHVTAVEPGSFRT 185

Length = 277

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 25/206 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFG-AIIHTC--SRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           ITG   G G  +   LA  G  +I     +   T L     E   +GL +     DL+  
Sbjct: 7   ITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRA---EAARRGLALRVEKLDLTDA 63

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF---HLSK 128
             R +         +  +++L+NNA +      +D   E +  L  TN   VF    L++
Sbjct: 64  IDRAQ-------AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETN---VFGPLELTQ 113

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                + A G G +VF SS+AG+   P T  Y     A+  + + +  E     I+  ++
Sbjct: 114 GFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATV 173

Query: 189 APGVIRTSLSDAIR------HDPAKN 208
            PG   T  +D +       +DPA+N
Sbjct: 174 NPGPYLTGFNDTMAETPKRWYDPARN 199

Length = 257

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 26/257 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAII---------HTCSRNQTELNERLQEWKLKGLKVTGSV 65
           +TG   GIG A     A  GA +            +   +     + E    G +   + 
Sbjct: 11  VTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANG 70

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEYMSTLR---STNFE 121
            D++  +    L++     F G L++LVNNA +   +   + +  E+ + +      +F 
Sbjct: 71  DDIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFA 129

Query: 122 SVFHLSKLAHPLLKASGNGI---IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           ++ H +       KA G  +   I+  SS AG+  +     Y      +  LT     E 
Sbjct: 130 TLRHAAAYWRAESKA-GRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAEL 188

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
            +  +  N+IAP   RT +++ +  +    K  EG            P+ VS LV +L  
Sbjct: 189 GRYGVTVNAIAP-AARTRMTETVFAEMMA-KPEEGEFDAM------APENVSPLVVWLGS 240

Query: 239 PAASYITGQVICVDGGM 255
             +  +TG+V  V+GG 
Sbjct: 241 AESRDVTGKVFEVEGGK 257

Length = 286

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 8   SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVC 66
              +   +TG +RGIG    + LAG GA +    R +     ++  E +  G + +    
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           DL+  E    LM+T    F G L+ LV NA+  +         +Y   L   N ++  +L
Sbjct: 64  DLTDEESVAALMDTAREEF-GGLDALVLNASGGM---ESGMDEDYAMRL---NRDAQRNL 116

Query: 127 SKLAHPLLKASGNGIIVFISS 147
           ++ A PL+ A     +VF++S
Sbjct: 117 ARAALPLMPAGSR--VVFVTS 135

Length = 248

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 46.4 bits (110), Expect = 7e-06
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)

Query: 15  ITGGTRGIGHAIVEELAGF----GAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDL 68
           +TG +RG G  I +ELA      G+++   +RN   L +   E   +  GL+V     DL
Sbjct: 5   VTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDL 64

Query: 69  SSREQREKLMETVSSIFQGKLN-----LLVNNAAV-----AVPKEALDTTAEYMSTLRST 118
            +    E+L++ +      +       LL+NNA           +  D+T   +    + 
Sbjct: 65  GAEAGLEQLLKALRE--LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDST--QVQNYWAL 120

Query: 119 NFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
           N  S+  L+       K S   N  +V ISS+  +       LY     A + L + L  
Sbjct: 121 NLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLAL 180

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIR---HDPAKNKIVEGL 214
           E+   N+R  + APGV+ T +   +R    DP   K ++ L
Sbjct: 181 EEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQEL 221

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.1 bits (113), Expect = 7e-06
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 33/251 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG  RGIG AI E LA  GA  +          L           +  T    D+++ +
Sbjct: 215 VTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR-----VGGTALALDITAPD 269

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK--LA 130
              ++ E ++    G L+++V+NA +   K   +       ++ + N  +   +++  LA
Sbjct: 270 APARIAEHLAERH-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLA 328

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              L     G IV +SS++G+        Y      +  L + L    A+  I  N++AP
Sbjct: 329 AGALGD--GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAP 386

Query: 191 GVIRTSLSDAIRHDPAK--------NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           G I T ++ AI   P          N + +G          G P +V+  +A+L  PA+ 
Sbjct: 387 GFIETQMTAAI---PFATREAGRRMNSLQQG----------GLPVDVAETIAWLASPASG 433

Query: 243 YITGQVICVDG 253
            +TG V+ V G
Sbjct: 434 GVTGNVVRVCG 444

Length = 450

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 51/211 (24%), Positives = 76/211 (36%), Gaps = 41/211 (19%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   I G T  I  A     A  GA ++  +R+   L ERL +             DL +
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERL-ERLAD-------------DLRA 47

Query: 71  REQREKLMETVSSIFQGKLNLLVNN---AAVAVPKEALDTT--------------AEYMS 113
           R         VS+    +L++L      A +       D                A+   
Sbjct: 48  RGAVA-----VST---HELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPAL 99

Query: 114 TLR--STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT 171
            LR   TNFE    L  L     +A G+G IV ISSVAG        +YG    A+    
Sbjct: 100 ALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159

Query: 172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIR 202
             L     K  +   ++ PG +RT ++  ++
Sbjct: 160 SGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK 190

Length = 243

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 117 STNFE-SVFHLSKLAHPLLKASGNGIIVFISSVAGVT--AAPLTPLY---GPYNGAMNQL 170
           +T    S + L  LA  LL     G      S+ G+   A    P Y   G    A+   
Sbjct: 114 ATALHVSAYSLKSLAKALLPLMNEG-----GSIVGLDFDATVAWPAYDWMGVAKAALEST 168

Query: 171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEV 229
            ++L  +     IR N +A G IRT  + AI   P    + EG   R P+     +P  V
Sbjct: 169 NRYLARDLGPRGIRVNLVAAGPIRTLAAKAI---PGFELLEEGWDERAPLGWDVKDPTPV 225

Query: 230 SSLVAFLC---FPAASYITGQVICVDGGMTVNG 259
           +  V  L    FPA    TG+++ VDGG    G
Sbjct: 226 ARAVVALLSDWFPA---TTGEIVHVDGGAHAMG 255

Length = 256

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.2 bits (109), Expect = 9e-06
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 15/193 (7%)

Query: 79  ETVSSIFQ------GKLNLLVNNAAVAVPKEA----LDTTAEYMSTLRSTNFESVFHLSK 128
           +++S++F       G  + L++  A A   E     +DT+ E        +  S+  LS+
Sbjct: 71  KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSR 130

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A  L+   G+  IV ++        P   + G    A+    K+L  +  ++NIR N+I
Sbjct: 131 SAEALMHDGGS--IVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAI 188

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           + G I+T  S AI      + +++   +  P+ R    ++V     +L    +  +TG++
Sbjct: 189 SAGPIKTLASSAIGD---FSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEI 245

Query: 249 ICVDGGMTVNGFN 261
             VD G  + G N
Sbjct: 246 HYVDCGYNIMGSN 258

Length = 260

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 21/140 (15%)

Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
              +TGG   IG  +VE L   G  +    R +  L+  L         V   V DL+ R
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG-------VEFVVLDLTDR 54

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  ++L + V           ++ AA +   ++  +           N +   +L + A 
Sbjct: 55  DLVDELAKGVPDAV-------IHLAAQSSVPDSNASDPAEF---LDVNVDGTLNLLEAA- 103

Query: 132 PLLKASGNGIIVFISSVAGV 151
              +A+G    VF SSV+ V
Sbjct: 104 ---RAAGVKRFVFASSVSVV 120

Length = 314

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 43/211 (20%), Positives = 68/211 (32%), Gaps = 22/211 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            I G T GIG A+   LAG G  +    R+   L     E     +       D+++  +
Sbjct: 2   LILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAE-----VGALARPADVAAELE 56

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L + +     G L+LLV  A   + K    T       +   N      + K A  L
Sbjct: 57  VWALAQEL-----GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALAL 111

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L A      VF+ +   +   P    Y     A+    +    E     +R   + P  +
Sbjct: 112 LAAGARL--VFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG--LRLTLVRPPAV 167

Query: 194 RTSL--------SDAIRHDPAKNKIVEGLVS 216
            T L          A+  +     I+E    
Sbjct: 168 DTGLWAPPGRLPKGALSPEDVAAAILEAHQG 198

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 13  YFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNE---RLQEWKLKGLKVTGSVC 66
           Y +TGG  G+G  +   LA  GA   ++   SR+     E    L E + +G +VT   C
Sbjct: 3   YLVTGGLGGLGLELARWLAERGARHLVL--LSRSGAPDPEAEALLAELEARGAEVTVVAC 60

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF-- 124
           D+S R+    L+  + +     L  +++ A V       + TAE        +F  V   
Sbjct: 61  DVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAE--------DFARVLAP 111

Query: 125 --HLSKLAHPLLKASGNGIIVFISSVAGV 151
               +   H   +       V  SS+AGV
Sbjct: 112 KVTGAWNLHEATRDRPLDFFVLFSSIAGV 140

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 58/229 (25%), Positives = 83/229 (36%), Gaps = 44/229 (19%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSS-- 70
           ITG   GIG     ELA  GA +    R+  +  E   E        +V     DL+S  
Sbjct: 6   ITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASLK 65

Query: 71  --REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
             R    + +       + +L++L+NNA V            Y  T     FE  F ++ 
Sbjct: 66  SIRAFAAEFLAE-----EDRLDVLINNAGV--------MRCPYSKT--EDGFEMQFGVNH 110

Query: 129 LAHPLL--------KASGNGIIVFISSVAGVTAA-PLTPLYG--PYNG--AMNQ------ 169
           L H LL        K S    IV +SS+A          L     YN   A  Q      
Sbjct: 111 LGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANV 170

Query: 170 -LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR 217
             T+ L        +  N++ PGV+RT L    RH    +  +  L++ 
Sbjct: 171 LFTRELARRLQGTGVTVNALHPGVVRTELG---RHTGIHHLFLSTLLNP 216

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL--------QEWKLKGLKVTGSV 65
           FITG +RGIG AI  + A  GA +   ++   E + +L        +E +  G K    +
Sbjct: 7   FITGASRGIGKAIALKAARDGANVVIAAKT-AEPHPKLPGTIYTAAEEIEAAGGKALPCI 65

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
            D+   +Q    +E     F G +++LVNNA+       LDT  +    +   N    + 
Sbjct: 66  VDIRDEDQVRAAVEKAVEKF-GGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYL 124

Query: 126 LSKLAHPLLKASGNGIIVFIS 146
            SK   P LK S N  I+ +S
Sbjct: 125 CSKACLPYLKKSKNPHILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 23/146 (15%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK--LKGLKVTGSVCDLSSRE 72
           +TG + G+G  +   LA  GA +    RN+ +    +   +  +   K++    DLSS  
Sbjct: 19  VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA 78

Query: 73  QREKLMETVSSIFQGK-LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF------H 125
               L E + +  +G+ ++LL+NNA V  P E   TTA+         FE  F      H
Sbjct: 79  SVAALGEQLRA--EGRPIHLLINNAGVMTPPER-QTTAD--------GFELQFGTNHLGH 127

Query: 126 LSKLAH--PLLKASGNGIIVFISSVA 149
            +  AH  PLL+A G   +   SS+A
Sbjct: 128 FALTAHLLPLLRA-GRARVTSQSSIA 152

Length = 313

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 13/197 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE--RLQEWKLKGLKVTGSVCDLSS-- 70
           +TG T GIG     +LA  G  +   +RN  +L +     + K    ++   V D S   
Sbjct: 58  VTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDI 117

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSK 128
            E  +++ ET+  +  G   +L+NN  V+ P      +   E +  L   N E    +++
Sbjct: 118 DEGVKRIKETIEGLDVG---VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ 174

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRA 185
              P +     G I+ I S A +   P  PLY  Y      ++Q ++ L  E  K  I  
Sbjct: 175 AVLPGMLKRKKGAIINIGSGAAIV-IPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDV 233

Query: 186 NSIAPGVIRTSLSDAIR 202
               P  + T ++   R
Sbjct: 234 QCQVPLYVATKMASIRR 250

Length = 320

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 22/200 (11%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSR 71
             +TG +RG+G A+ E+L   G  +   +R++   L          G ++     DLS  
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAA------AGERLAEVELDLSDA 57

Query: 72  EQREKLMETVSSIFQGKLN-----LLVNNAAVAVPKEALDT-TAEYMSTLRSTNFESVFH 125
                 +     +    ++     LL+NNA    P   L T  A  ++     N  +   
Sbjct: 58  AAAAAWLA--GDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPL- 114

Query: 126 LSKLAHPLLKASGNGI---IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
              L   L +A+ +     I+ ISS A   A     +Y     A++   + +  + A   
Sbjct: 115 --MLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANRA 171

Query: 183 IRANSIAPGVIRTSLSDAIR 202
           +R  S+APGV+ T +   IR
Sbjct: 172 LRIVSLAPGVVDTGMQATIR 191

Length = 243

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 28/210 (13%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK------GLKVTGS 64
           Q   ITG + G+G  +  E A  G  +  C+R      +RL+E K +      G+KV  +
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRT----DRLEELKAELLARYPGIKVAVA 58

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAV----AVPKEALDT---TAEYMSTLRS 117
             D++  +Q  ++         G L+ ++ NA +     +          TAE       
Sbjct: 59  ALDVNDHDQVFEVFAEFRDEL-GGLDRVIVNAGIGKGARLGTGKFWANKATAE------- 110

Query: 118 TNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP--LTPLYGPYNGAMNQLTKHLE 175
           TNF +     + A  + +  G+G +V ISSV+ V   P      Y      +  L + L 
Sbjct: 111 TNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKA-AYAASKAGVASLGEGLR 169

Query: 176 CEQAKDNIRANSIAPGVIRTSLSDAIRHDP 205
            E AK  I+ ++I PG IR+ ++   +  P
Sbjct: 170 AELAKTPIKVSTIEPGYIRSEMNAKAKSTP 199

Length = 248

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 18/190 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSRE 72
            ITG T GIG  +  + A  G  +  C RNQ+ L+E   +   +  L       D++   
Sbjct: 5   LITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAF-----DVTDHP 59

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD---TTAEYMSTLRSTNFESVFHLSKL 129
             +  +  +  I      L + NA      E +D     A  M+ + + N   V +  + 
Sbjct: 60  GTKAALSQLPFI----PELWIFNAGDC---EYMDDGKVDATLMARVFNVNVLGVANCIEG 112

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P L       +V + S+A   A P    YG    A+    + L+ +     I   ++ 
Sbjct: 113 IQPHLSCGHR--VVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVF 170

Query: 190 PGVIRTSLSD 199
           PG + T L+D
Sbjct: 171 PGFVATPLTD 180

Length = 240

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 19/147 (12%)

Query: 13  YFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLS 69
           Y ITGG  G+G  +   LA  GA  ++    R        R    +  G +V+   CD++
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
                  L+  +++   G L  +++ A V       + T           F +V   +K+
Sbjct: 213 DPAALAALLAELAA--GGPLAGVIHAAGVLRDALLAELTPA--------AFAAVLA-AKV 261

Query: 130 A-----HPLLKASGNGIIVFISSVAGV 151
           A     H L         V  SSVA +
Sbjct: 262 AGALNLHELTPDLPLDFFVLFSSVAAL 288

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 64/254 (25%), Positives = 93/254 (36%), Gaps = 47/254 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG   +G  I E     G  +      + +L     E   K L V   VCD +     
Sbjct: 5   VTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVAAKELDVDAIVCDNTDPAS- 58

Query: 75  EKLMETVSSIFQGKLNLLVNNAA----VAVPK--EALDTTAEYMSTLRSTNFESVFHLSK 128
              +E    +F   L+ +VN  A       P+     DT   + + L +T   +V  +  
Sbjct: 59  ---LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQS 115

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK----DNIR 184
           +   L   SG  II  +         P  P  G    A+     +    QA       I 
Sbjct: 116 VGDHL--RSGGSIISVV---------PENPPAGSAEAAIKAALSNWTAGQAAVFGTRGIT 164

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N++A G  R+         P      +GL SRTP   P    E++ L  FL  PAA +I
Sbjct: 165 INAVACG--RSV-------QPG----YDGL-SRTP---PPVAAEIARLALFLTTPAARHI 207

Query: 245 TGQVICVDGGMTVN 258
           TGQ + V  G   +
Sbjct: 208 TGQTLHVSHGALAH 221

Length = 223

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 18/157 (11%)

Query: 11  QNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQT--ELNERLQE--WKLKGLKVTGSV 65
           + +FITG + G G  + E L   G  +  T  R     +L  R  +  W L+ L VT S 
Sbjct: 3   KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQ-LDVTDS- 60

Query: 66  CDLSSREQREKLMETVSSIFQ--GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV 123
                      +   V   F   G+++++V+NA   +   A + +   +     TN    
Sbjct: 61  ---------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGS 111

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY 160
             + + A P L+  G G IV +SS  G  A P   LY
Sbjct: 112 IQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLY 148

Length = 276

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	367
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.93
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN02583	297	cinnamoyl-CoA reductase	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.88
PLN02650	351	dihydroflavonol-4-reductase	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.87
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN00198	338	anthocyanidin reductase; Provisional	99.85
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.85
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.84
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.83
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.82
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.82
PRK06720	169	hypothetical protein; Provisional	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.81
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.8
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.8
PLN02427	386	UDP-apiose/xylose synthase	99.79
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.78
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.78
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.77
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.77
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.74
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.74
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.73
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.72
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.71
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.71
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.7
PLN02260	668	probable rhamnose biosynthetic enzyme	99.7
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.69
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.69
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.68
CHL00194	317	ycf39 Ycf39; Provisional	99.67
PLN02206	442	UDP-glucuronate decarboxylase	99.66
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.66
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.64
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.63
PRK07201	657	short chain dehydrogenase; Provisional	99.6
PRK05865	854	hypothetical protein; Provisional	99.56
PLN02996	491	fatty acyl-CoA reductase	99.55
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.55
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.5
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.48
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.47
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.46
PLN02778	298	3,5-epimerase/4-reductase	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.42
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.4
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.4
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.37
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.37
PLN00016	378	RNA-binding protein; Provisional	99.36
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.36
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.35
PRK12320	699	hypothetical protein; Provisional	99.31
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.26
PLN02503	605	fatty acyl-CoA reductase 2	99.25
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.23
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PRK08309	177	short chain dehydrogenase; Provisional	99.16
PLN02260	668	probable rhamnose biosynthetic enzyme	99.16
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.15
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.12
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.05
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.0
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.84
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.83
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.73
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.62
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.57
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.51
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.5
COG2910	211	Putative NADH-flavin reductase [General function p	98.48
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.46
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.45
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.44
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.44
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.24
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.15
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.12
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.07
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.07
KOG2774	366	consensus NAD dependent epimerase [General functio	98.03
PLN00106	323	malate dehydrogenase	97.99
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.96
PTZ00325	321	malate dehydrogenase; Provisional	97.95
PRK09620	229	hypothetical protein; Provisional	97.88
PRK14982	340	acyl-ACP reductase; Provisional	97.84
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.83
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.8
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.69
COG3268	382	Uncharacterized conserved protein [Function unknow	97.61
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.47
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.45
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.35
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.32
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.29
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.29
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.28
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.22
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.2
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.15
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.11
PRK06849	389	hypothetical protein; Provisional	97.1
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.09
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.06
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.05
PRK05086	312	malate dehydrogenase; Provisional	97.01
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.0
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.94
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.93
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.91
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.89
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.88
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.87
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.86
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.85
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.84
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.83
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.77
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.75
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.71
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.7
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.67
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.62
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.62
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.57
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.56
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.52
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.52
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.43
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.4
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.39
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.35
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.3
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.28
PRK14968	188	putative methyltransferase; Provisional	96.25
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.21
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.18
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.18
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.15
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.15
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.15
PRK09496	453	trkA potassium transporter peripheral membrane com	96.13
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.11
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.11
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.1
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.09
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.03
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.95
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.94
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.94
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.91
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.9
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.9
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.88
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.84
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.83
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.78
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.77
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.76
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.73
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.69
PTZ00117	319	malate dehydrogenase; Provisional	95.68
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.68
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.67
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.66
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.64
PLN00203	519	glutamyl-tRNA reductase	95.62
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.56
PRK05442	326	malate dehydrogenase; Provisional	95.51
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.5
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.5
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.5
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.49
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.48
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.45
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.45
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.45
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.45
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.44
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.43
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.39
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.38
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.37
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.37
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.32
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.3
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.3
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.27
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.26
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.25
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.24
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.23
PRK08223	287	hypothetical protein; Validated	95.23
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.18
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.18
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.12
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.11
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.11
PRK09496	453	trkA potassium transporter peripheral membrane com	95.1
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.09
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.07
PLN02740	381	Alcohol dehydrogenase-like	95.05
PRK08655	437	prephenate dehydrogenase; Provisional	95.02
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.01
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.96
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.92
PLN02602	350	lactate dehydrogenase	94.91
PTZ00354	334	alcohol dehydrogenase; Provisional	94.9
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.89
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.89
PRK04148	134	hypothetical protein; Provisional	94.89
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.88
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.86
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.83
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.82
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.73
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.72
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.67
PRK10669	558	putative cation:proton antiport protein; Provision	94.63
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.57
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.55
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.54
PRK08328	231	hypothetical protein; Provisional	94.52
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.44
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.43
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.42
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.33
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.32
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.31
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.25
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.25
PLN02827	378	Alcohol dehydrogenase-like	94.22
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.21
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.21
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.21
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.18
PRK06223	307	malate dehydrogenase; Reviewed	94.13
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.12
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	94.09
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	94.01
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.01
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.95
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	93.84
PRK07411	390	hypothetical protein; Validated	93.79
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	93.78
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.76
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	93.74
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	93.73
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.7
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.62
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	93.58
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	93.58
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.58
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.55
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	93.53
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.5
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.49
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	93.49
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.47
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	93.46
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	93.43
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.34
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	93.33
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.32
cd08252	336	AL_MDR Arginate lyase and other MDR family members	93.29
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	93.28
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	93.28
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	93.26
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.19

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-48  Score=331.04  Aligned_cols=241  Identities=27%  Similarity=0.389  Sum_probs=223.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++.++||||++|||+++++.|+++|++|++++++.+.+++.+..+... ++...+.||++++++++..+++..+.+ |++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSL-GTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhc-CCC
Confidence            458999999999999999999999999999999999888888888654 356778899999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH--cCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK--ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~--~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++||||||+.....+..+..++|+..+.+|+.|.|.++|++.+.|.  ++.+++|||+||+.+..+.-++..|++||+++
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV  171 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence            9999999999988888999999999999999999999999998843  44456999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      .+|+|+.|+|++++|||||+|+||++.|||....++.     ..+.+...+|++|++++||||+.++||+|+.++|+||+
T Consensus       172 IgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~-----v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~  246 (256)
T KOG1200|consen  172 IGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK-----VLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGT  246 (256)
T ss_pred             eeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH-----HHHHHHccCCccccCCHHHHHHHHHHHhccccccccce
Confidence            9999999999999999999999999999999876544     77888999999999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      .+.|+||..+
T Consensus       247 t~evtGGl~m  256 (256)
T KOG1200|consen  247 TLEVTGGLAM  256 (256)
T ss_pred             eEEEeccccC
Confidence            9999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-45  Score=340.47  Aligned_cols=252  Identities=27%  Similarity=0.355  Sum_probs=221.7

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ..+++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          2 LKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             CccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3455666 9999999999999999999999999999999999888888777543 5578899999999999999999986


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                       .+ |++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        82 -~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~a  159 (263)
T PRK08339         82 -NI-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNV  159 (263)
T ss_pred             -hh-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHH
Confidence             57 8999999999987777788899999999999999999999999999998887899999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      +|+|+++|+++++.|++++|||||+|+||+++|++.......      ...++..+.+....|.+|+++|+|+|++++||
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL  239 (263)
T PRK08339        160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFL  239 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986432110      01112334456678999999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCcccc
Q 035642          237 CFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +|+.+.++||+.+.+|||+...
T Consensus       240 ~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        240 ASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hcchhcCccCceEEECCCcccc
Confidence            9999999999999999998653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=333.91  Aligned_cols=244  Identities=27%  Similarity=0.401  Sum_probs=215.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+..  ++..+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            45665 9999999999999999999999999999988643  33444454456788899999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||.++..+.++..+|++||
T Consensus        82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence             8999999999998777788889999999999999999999999999997654 58999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.|++++||+||+|+||+++|++........   ...+.+....|.+++++|+|+|+++.||+|+.+.++
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~  237 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYV  237 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999876543221   123345567899999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      +|+.+.+|||+.
T Consensus       238 ~G~~i~vdgg~~  249 (251)
T PRK12481        238 TGYTLAVDGGWL  249 (251)
T ss_pred             CCceEEECCCEe
Confidence            999999999975

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-44  Score=331.36  Aligned_cols=250  Identities=26%  Similarity=0.350  Sum_probs=221.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ +++||||++|||++++++|+++|++|++++|+.+++++..+++..  .+.++.++.+|++|+++++++++++.+.+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            444 999999999999999999999999999999999988888888865  45678899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||.....+..+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++..+|++||+
T Consensus        85 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (260)
T PRK07063         85 -GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKH  163 (260)
T ss_pred             -CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHH
Confidence             8999999999987666667788999999999999999999999999998877899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      |+++++++++.|++++||+||+|+||+++|++....... ..............|.+|+++|+|+|++++||+++.+.++
T Consensus       164 a~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~i  243 (260)
T PRK07063        164 GLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFI  243 (260)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccccc
Confidence            999999999999999999999999999999986543211 1111123344566899999999999999999999999999


Q ss_pred             cccEEEeCCCccccC
Q 035642          245 TGQVICVDGGMTVNG  259 (367)
Q Consensus       245 tG~~i~vdgG~~~~~  259 (367)
                      ||+.+.+|||+...+
T Consensus       244 tG~~i~vdgg~~~~~  258 (260)
T PRK07063        244 NATCITIDGGRSVLY  258 (260)
T ss_pred             CCcEEEECCCeeeec
Confidence            999999999987654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-44  Score=334.31  Aligned_cols=243  Identities=21%  Similarity=0.237  Sum_probs=206.3

Q ss_pred             CCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++  |||+++|++|+++|++|++++|+.+..+...+.....+. ..++++|++|+++++++++++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            445 999999997  999999999999999999999986443333222222232 3578899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       |++|++|||||+...    .++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.+++.+|+
T Consensus        84 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         84 -GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             -CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhh
Confidence             899999999998643    45678899999999999999999999999999963  48999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+.+|+++++.|++++|||||+|+||+++|++.......   ...........|++|+++|+|+|++++||+|+.+
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~  237 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA---RAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLS  237 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch---HHHHHHHhhcCCccccCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999976433211   1122334456789999999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .++||+.+.+|||+...
T Consensus       238 ~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        238 SGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             cccCceEEeecCCcccC
Confidence            99999999999997653

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-44  Score=327.86  Aligned_cols=244  Identities=29%  Similarity=0.449  Sum_probs=216.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45565 99999999999999999999999999999999999888888887767788899999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCC-C-CCccHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAA-P-LTPLYGP  162 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~-~-~~~~Y~a  162 (367)
                       +++|++|||||.....++.+.+.++|++++++|+.+++++++++.++|.+++ .|+||++||.++.... + ...+|++
T Consensus        85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a  163 (253)
T PRK05867         85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA  163 (253)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence             8999999999998777788889999999999999999999999999997654 5799999999876533 3 4578999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++++++++.|++++||+||+|+||+++|++.....   .   ..+.+....|.+|+.+|+|+|++++||+|++++
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~---~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~  237 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---E---YQPLWEPKIPLGRLGRPEELAGLYLYLASEASS  237 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---H---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999999999999999999999865431   1   223344567899999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+.+.+|||+..
T Consensus       238 ~~tG~~i~vdgG~~~  252 (253)
T PRK05867        238 YMTGSDIVIDGGYTC  252 (253)
T ss_pred             CcCCCeEEECCCccC
Confidence            999999999999753

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-44  Score=329.89  Aligned_cols=240  Identities=23%  Similarity=0.292  Sum_probs=208.9

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ +++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.  +.++.+++||++|+++++++++++.+++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            444 99999999  8999999999999999999999984 4444444442  3467889999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       |++|++|||||...+    .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||.++..+.+++.+|+
T Consensus        82 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~  158 (252)
T PRK06079         82 -GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMG  158 (252)
T ss_pred             -CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhH
Confidence             899999999998653    56778899999999999999999999999999964  48999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.......+   +..+.+....|.+|+++|+|+|+++.||+|+++
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~  235 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHK---DLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLS  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChH---HHHHHHHhcCcccCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999865432211   233445566899999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      ++++|+.+.+|||+.+
T Consensus       236 ~~itG~~i~vdgg~~~  251 (252)
T PRK06079        236 TGVTGDIIYVDKGVHL  251 (252)
T ss_pred             ccccccEEEeCCceec
Confidence            9999999999999753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.5e-44  Score=332.53  Aligned_cols=242  Identities=23%  Similarity=0.279  Sum_probs=204.1

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++. ..+.. .++++|++|+++++++++++.+.
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            344 99999997  89999999999999999999999853 222223332 22334 57889999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           85 FQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      + |++|++|||||+...    .++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.+++..|
T Consensus        81 ~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         81 L-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             c-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhh
Confidence            8 899999999998642    56778899999999999999999999999999965  4899999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.........   .........|++|+++|+|+|++++||+|+.
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~pl~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRM---ILKWNEINAPLKKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhH---HhhhhhhhCchhccCCHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999987543211111   1122234578999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      +.++||+.+.+|||+...
T Consensus       235 ~~~itG~~i~vdGG~~~~  252 (274)
T PRK08415        235 SSGVTGEIHYVDAGYNIM  252 (274)
T ss_pred             hhcccccEEEEcCccccc
Confidence            999999999999998653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-43  Score=327.74  Aligned_cols=243  Identities=22%  Similarity=0.275  Sum_probs=207.2

Q ss_pred             CCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ +++||||++  |||+++|++|+++|++|++++|+. +.++..+++....+...++++|++|+++++++++++.+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            444 999999997  999999999999999999999884 3344444554331223467899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       |++|++|||||....    .++.+.+.++|++++++|+.+++.+++++.|+|++  .|+||++||.++..+.+++.+|+
T Consensus        85 -g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         85 -GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             -CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence             899999999997542    45678899999999999999999999999999954  48999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.......   .+..+......|.+|+++|+|+|++++||+|+++
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  238 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF---STMLKSHAATAPLKRNTTQEDVGGAAVYLFSELS  238 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc---HHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999975432211   1133445566899999999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .++||+.+.+|||+.+.
T Consensus       239 ~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        239 KGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             ccCcceEEEeCCccccc
Confidence            99999999999998764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.3e-43  Score=328.44  Aligned_cols=246  Identities=28%  Similarity=0.340  Sum_probs=210.8

Q ss_pred             CCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         8 ~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++++ +++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++...+.++.++++|++|+++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            3455 99999986  89999999999999999998876543  3344555555444457788999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc
Q 035642           83 SIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +++ |++|++|||||+...    .++.+.+.++|++++++|+.|++.++++++|+|++  .|+||++||.++..+.++..
T Consensus        83 ~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         83 QKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccc
Confidence            998 899999999998642    46778899999999999999999999999999965  48999999999998889999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++........   +..+.+....|.+|+++|+|+|+++.||+|
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~~~dva~~~~fl~s  236 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGIL---DMIHHVEEKAPLRRTVTQTEVGNTAAFLLS  236 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccch---hhhhhhhhcCCcCcCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999764332111   123344556799999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccC
Q 035642          239 PAASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~~  259 (367)
                      ++++++||+.+.+|||+...+
T Consensus       237 ~~~~~~tG~~i~vdgg~~~~~  257 (258)
T PRK07370        237 DLASGITGQTIYVDAGYCIMG  257 (258)
T ss_pred             hhhccccCcEEEECCcccccC
Confidence            999999999999999987653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-43  Score=326.05  Aligned_cols=242  Identities=24%  Similarity=0.312  Sum_probs=206.1

Q ss_pred             CeEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+....++||++|+++++++++++.+++ ++
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   84 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-DG   84 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            39999997  67999999999999999999988864 3344444444332345678999999999999999999998 89


Q ss_pred             ccEEEEcCCCCCCC----C-ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           89 LNLLVNNAAVAVPK----E-ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        89 iD~lI~~Ag~~~~~----~-~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +|++|||||+....    + +.+.+.+.|++++++|+.+++++++++.|+|+++ .|+||++||.++..+.+++.+|++|
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~as  163 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMA  163 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhH
Confidence            99999999986432    2 3456788999999999999999999999999755 4899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++........   +..+.+....|++|+++|+|+|+++.||+++.+.+
T Consensus       164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~  240 (261)
T PRK08690        164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFG---KLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG  240 (261)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchH---HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            999999999999999999999999999999999865432211   13344456679999999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 035642          244 ITGQVICVDGGMTVN  258 (367)
Q Consensus       244 itG~~i~vdgG~~~~  258 (367)
                      ++|+.+.+|||+...
T Consensus       241 ~tG~~i~vdgG~~~~  255 (261)
T PRK08690        241 ITGEITYVDGGYSIN  255 (261)
T ss_pred             cceeEEEEcCCcccc
Confidence            999999999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-43  Score=322.43  Aligned_cols=247  Identities=26%  Similarity=0.378  Sum_probs=219.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++++++++++++++.+++ 
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   81 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF-   81 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-
Confidence            3444 99999999999999999999999999999999999888888887767788999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHHH
Q 035642           87 GKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYN  164 (367)
Q Consensus        87 g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~asK  164 (367)
                      +++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||.++. .+.+++.+|++||
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHH
Confidence            89999999999864 356677899999999999999999999999999988888999999999886 5678889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.|++++||+||+|+||+++|++.........   ....+....|.+++.+|+|+|++++||+++.+.++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  238 (254)
T PRK07478        162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPE---ALAFVAGLHALKRMAQPEEIAQAALFLASDAASFV  238 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCC
Confidence            999999999999999999999999999999998765432222   22333455688899999999999999999989999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      +|+.+.+|||+...
T Consensus       239 ~G~~~~~dgg~~~~  252 (254)
T PRK07478        239 TGTALLVDGGVSIT  252 (254)
T ss_pred             CCCeEEeCCchhcc
Confidence            99999999997653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=5.3e-43  Score=324.71  Aligned_cols=255  Identities=42%  Similarity=0.525  Sum_probs=219.8

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .+.+.+ ++|||||++|||+++|++|++.|++|++++|+++++++...++...+   .++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            455667 99999999999999999999999999999999999998888876543   46999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCC-CccCCCHHHHHHhHHHhhH-HHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC-c
Q 035642           82 SSIFQGKLNLLVNNAAVAVPK-EALDTTAEYMSTLRSTNFE-SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT-P  158 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~-~~~~~~~e~~~~~~~vNv~-g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~  158 (367)
                      .+++.|++|++|||||..... +..+.+.+.|++++++|+. +.+.+.+.+.+++.++++|.|+++||.++..+..+. .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            999438999999999998765 6899999999999999999 577777888888888889999999999998876665 7


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHH--HhhcCCCCCCCCHHHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEG--LVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      +|++||+|+++|+|++|.|++++|||||+|+||.+.|++...........+..+.  .....|.+|++.|+|+|..+.||
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fl  242 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFL  242 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhh
Confidence            9999999999999999999999999999999999999982111111111222222  34457899999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCccccCC
Q 035642          237 CFPAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      ++++++|++|+.+.+|||.+....
T Consensus       243 a~~~asyitG~~i~vdgG~~~~~~  266 (270)
T KOG0725|consen  243 ASDDASYITGQTIIVDGGFTVVGP  266 (270)
T ss_pred             cCcccccccCCEEEEeCCEEeecc
Confidence            999878999999999999988643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-43  Score=324.39  Aligned_cols=247  Identities=21%  Similarity=0.301  Sum_probs=209.1

Q ss_pred             CCCCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +.+++++ ++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++........++.||++|+++++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence            3455666 99999998  59999999999999999999999864322 22222221123567889999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT  157 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~  157 (367)
                      .+++ |++|++|||||....    .++.+.+.++|++++++|+.|++++++.++|+|++  .|+||++||.++..+.+++
T Consensus        83 ~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~  159 (258)
T PRK07533         83 AEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENY  159 (258)
T ss_pred             HHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccc
Confidence            9999 899999999998643    45677899999999999999999999999999953  5899999999998888889


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ..|++||+|+.+|+++++.|++++||+||+|+||+++|++........   +..+......|.+|+++|+|+|++++||+
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~p~dva~~~~~L~  236 (258)
T PRK07533        160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD---ALLEDAAERAPLRRLVDIDDVGAVAAFLA  236 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH---HHHHHHHhcCCcCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999875432211   13344456789999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++++++++|+.+.+|||+...
T Consensus       237 s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        237 SDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             ChhhccccCcEEeeCCccccc
Confidence            999999999999999998754

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-43  Score=322.01  Aligned_cols=246  Identities=26%  Similarity=0.342  Sum_probs=217.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++.++.+|++|++++.++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44555 9999999999999999999999999999999764 456666777666677889999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC--CccHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL--TPLYGP  162 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~--~~~Y~a  162 (367)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++++++++++.|++++.|+||++||.++..+.++  ...|++
T Consensus        84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  162 (254)
T PRK06114         84 L-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNA  162 (254)
T ss_pred             c-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHH
Confidence            8 8999999999998777778889999999999999999999999999998887899999999998876654  689999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++++++++.|++++||+||+|+||+++|++.....    ..+..+.+....|++|+++|+|+|++++||+|+.++
T Consensus       163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~----~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  238 (254)
T PRK06114        163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE----MVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAAS  238 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc----chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999999865311    111234455678999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+++.+|||+..
T Consensus       239 ~~tG~~i~~dgg~~~  253 (254)
T PRK06114        239 FCTGVDLLVDGGFVC  253 (254)
T ss_pred             CcCCceEEECcCEec
Confidence            999999999999865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=6.4e-43  Score=309.75  Aligned_cols=223  Identities=23%  Similarity=0.334  Sum_probs=200.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|||||+|||.++|++|+++|++|++++|+.+++++++.++.+  +.+..+..|++|.++++++++.+.++| +++|
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~-g~iD   83 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF-GRID   83 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-Cccc
Confidence            4999999999999999999999999999999999999999999864  578889999999999999999999999 9999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||.....++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|.|||+||++|..++++...|+++|+++.+|
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~f  163 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAF  163 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHH
Confidence            99999999988999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +..|+.|+..++|||.+|+||.+.|............. ..+..   .......+|+|+|+++.|.++..
T Consensus       164 s~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~-~~~~~---y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         164 SLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDE-RADKV---YKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHhcCCCeeEEEecCceecceecccccCCchhh-hHHHH---hccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999887766665543222 22221   11223458999999999998643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-43  Score=322.23  Aligned_cols=251  Identities=32%  Similarity=0.475  Sum_probs=224.0

Q ss_pred             CCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            2 YSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         2 ~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      |+|..+++++ ++|||||++|||++++++|+++|++|++++|+ ++.+++.+.+...+.++.++.+|+++++++++++++
T Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   84 (258)
T PRK06935          6 FSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKE   84 (258)
T ss_pred             hccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            5777788877 99999999999999999999999999999998 556666666665567789999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+...+|
T Consensus        85 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (258)
T PRK06935         85 ALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAY  163 (258)
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhh
Confidence            99998 89999999999877777788889999999999999999999999999988878999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++++++++.|++++||+||+|+||+++|++.........   ..+......|.+++.+|+|+|+++.||+|+.
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKN---RNDEILKRIPAGRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999999999999998654332221   2334456688999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +++++|+++.+|||..+
T Consensus       241 ~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        241 SDYVNGHILAVDGGWLV  257 (258)
T ss_pred             hcCCCCCEEEECCCeec
Confidence            99999999999999754

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=322.40  Aligned_cols=252  Identities=28%  Similarity=0.379  Sum_probs=220.0

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +.+++++ +++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3455666 9999999999999999999999999999999998888887777654  347888999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      .+.+ +++|++|||||.....++.+.+.+.|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|+
T Consensus        82 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  160 (265)
T PRK07062         82 EARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS  160 (265)
T ss_pred             HHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhH
Confidence            9998 899999999999777788888999999999999999999999999999888789999999999999888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----ChhhhHHHHHH--hhcCCCCCCCCHHHHHHHHH
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPAKNKIVEGL--VSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~~~~~~~~~--~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++|+|+.+++++++.|++++||+||+|+||+++|++......     ........+.+  ....|.+|+++|+|+|++++
T Consensus       161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~  240 (265)
T PRK07062        161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALF  240 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999998643211     00111122222  24578999999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ||+++.+.++||+.+.+|||+..
T Consensus       241 ~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        241 FLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHhCchhcccccceEEEcCceEe
Confidence            99999899999999999999754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-42  Score=319.82  Aligned_cols=248  Identities=26%  Similarity=0.422  Sum_probs=223.1

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++.+ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++.+.++
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            345566 9999999999999999999999999999999998888888888766667888999999999999999999998


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++++++++.++|.+++.++||++||..+..+.++...|+++|
T Consensus        84 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 I-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            8 899999999998776778888999999999999999999999999999877789999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++++++++++.|++++||++|+|+||+++|++........   +..+......|.+++++|+|+|+++.||+++.++++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i  239 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDE---AFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFV  239 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999876533221   233445567899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       240 ~G~~i~~dgg~~~  252 (254)
T PRK08085        240 NGHLLFVDGGMLV  252 (254)
T ss_pred             cCCEEEECCCeee
Confidence            9999999999754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.1e-43  Score=322.95  Aligned_cols=243  Identities=25%  Similarity=0.313  Sum_probs=208.3

Q ss_pred             CCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         7 ~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +++++ +++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            44555 99999997  8999999999999999999998753   34444444432  45788899999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCC----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC
Q 035642           81 VSSIFQGKLNLLVNNAAVAV----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~  156 (367)
                      +.+++ |++|++|||||+..    ..++.+.+.+.|++.+++|+.++++++++++|+|.+  .|+||++||.++..+.++
T Consensus        81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence            99999 89999999999764    245677899999999999999999999999999954  489999999999988889


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ..+|++||+|+++|+++++.|++++||+||+|+||+++|++........   +.........|.+|+.+|+|+|++++||
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~p~~va~~~~~l  234 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFN---SILKEIEERAPLRRTTTQEEVGDTAAFL  234 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcccc---HHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999754322111   1223344567899999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCccc
Q 035642          237 CFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +++.+++++|+.+.+|||+.+
T Consensus       235 ~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        235 FSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cCcccccccceEEEECCchhc
Confidence            999999999999999999764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.9e-42  Score=321.77  Aligned_cols=247  Identities=31%  Similarity=0.467  Sum_probs=216.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+ +++++..+++...+.++.++.+|++++++++++++++.+.+ +
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   81 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-G   81 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-C
Confidence            344 99999999999999999999999999999999 77788888877666788999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.... .++.+.+.+.|++++++|+.+++.++++++|+|++++ |+||++||.++..+.++..+|++||+|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGA  160 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHH
Confidence            99999999998643 5677789999999999999999999999999998764 899999999999988899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh---hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK---NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      +++|+++++.|++++||+||+|+||+++|++..........   ...........|.+++.+|+|+|++++||+++.+++
T Consensus       161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  240 (272)
T PRK08589        161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF  240 (272)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999999987654322110   011112223468899999999999999999998999


Q ss_pred             ccccEEEeCCCcccc
Q 035642          244 ITGQVICVDGGMTVN  258 (367)
Q Consensus       244 itG~~i~vdgG~~~~  258 (367)
                      ++|+.+.+|||....
T Consensus       241 ~~G~~i~vdgg~~~~  255 (272)
T PRK08589        241 ITGETIRIDGGVMAY  255 (272)
T ss_pred             cCCCEEEECCCcccC
Confidence            999999999998754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-42  Score=322.45  Aligned_cols=240  Identities=20%  Similarity=0.313  Sum_probs=205.2

Q ss_pred             CeEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||++  |||+++|++|+++|++|++++|+ ++.++..+++....+...++.||++|+++++++++++.+.+ |+
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   84 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW-PK   84 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc-CC
Confidence            3999999986  99999999999999999999998 34445555665444456788899999999999999999988 89


Q ss_pred             ccEEEEcCCCCCCCC-----ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           89 LNLLVNNAAVAVPKE-----ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~-----~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +|++|||||+.....     +.+.+.++|++++++|+.|++.+++++.|+|++  .|+||++||.++..+.+++.+|++|
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHH
Confidence            999999999864322     456788999999999999999999999987643  4899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++|||||+|+||+++|++......   ..+..+......|.+|+++|+|+|++++||+++.+++
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc---hHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence            9999999999999999999999999999999987543221   1123344455689999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||+..
T Consensus       240 itG~~i~vdgg~~~  253 (262)
T PRK07984        240 ISGEVVHVDGGFSI  253 (262)
T ss_pred             ccCcEEEECCCccc
Confidence            99999999999754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.4e-42  Score=317.79  Aligned_cols=249  Identities=28%  Similarity=0.388  Sum_probs=217.5

Q ss_pred             CCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            3 SYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         3 ~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .|+++++++ +++||||++|||++++++|+++|++|++++++..  ++..+.+...+.++.++.+|++|+++++++++++
T Consensus         2 ~~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (253)
T PRK08993          2 ILDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERA   79 (253)
T ss_pred             cccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            456777876 9999999999999999999999999999887643  3344455444667889999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      .+++ +++|++|||||.....++.+.+.++|++++++|+.+++++++++.|+|.+++ .|+||++||..+..+.+....|
T Consensus        80 ~~~~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (253)
T PRK08993         80 VAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSY  158 (253)
T ss_pred             HHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcch
Confidence            9998 8999999999987777778889999999999999999999999999997764 5899999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++++++++.|+.++||+||+|+||+++|++.........   ....+....|.+|+.+|+|+|++++||+|+.
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~---~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQ---RSAEILDRIPAGRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999998764432211   2234456788999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +.+++|+.+.+|||+..
T Consensus       236 ~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        236 SDYINGYTIAVDGGWLA  252 (253)
T ss_pred             ccCccCcEEEECCCEec
Confidence            99999999999999754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.9e-42  Score=326.33  Aligned_cols=251  Identities=25%  Similarity=0.277  Sum_probs=212.2

Q ss_pred             CCCCCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc----------CC---cEEEEEccC-
Q 035642            6 WWSNEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK----------GL---KVTGSVCDL-   68 (367)
Q Consensus         6 ~~~~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~----------~~---~~~~~~~Dl-   68 (367)
                      .|++++ ++|||||  |+|||+++|+.|+++|++|++ +|+.+++++....+...          +.   ....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            456777 9999999  899999999999999999998 78888887777666421          11   135778898 


Q ss_pred             -CC------------------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHH
Q 035642           69 -SS------------------REQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLS  127 (367)
Q Consensus        69 -sd------------------~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~  127 (367)
                       ++                  +++++++++++.+.+ |++|+||||||...  ..++.+.+.++|++++++|+.++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence             43                  448999999999999 89999999998643  367888999999999999999999999


Q ss_pred             HHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccccCCh
Q 035642          128 KLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRHDP  205 (367)
Q Consensus       128 ~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~~~  205 (367)
                      ++++|+|+++  |+||++||.++..+.++. ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++....... 
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~-  238 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI-  238 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc-
Confidence            9999999753  999999999998888765 48999999999999999999986 799999999999999987653211 


Q ss_pred             hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCCC
Q 035642          206 AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPT  263 (367)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~  263 (367)
                        ++.........|++|+.+|+|+|.+++||+|+.+.+++|+.+.+|||+...+...|
T Consensus       239 --~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~  294 (303)
T PLN02730        239 --DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALD  294 (303)
T ss_pred             --HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCC
Confidence              11233334556888999999999999999999999999999999999999887666

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-42  Score=319.69  Aligned_cols=247  Identities=25%  Similarity=0.370  Sum_probs=215.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++| +.+.++...+++... +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34555 9999999999999999999999999998865 566667666666543 56789999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCC------CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC
Q 035642           84 IFQGKLNLLVNNAAVAV------PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT  157 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~------~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~  157 (367)
                      .+ +++|++|||||+..      ..++.+.+.+.+++++++|+.+++.+++.++|.|++++.|+||++||..+..+.+++
T Consensus        84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence            98 89999999998753      245667788999999999999999999999999988777999999999998888999


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .+|++||+|+++++++++.|++++||+||+|+||+++|++........   +..+......|.+|+.+|+|+|++++||+
T Consensus       163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~l~  239 (260)
T PRK08416        163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYE---EVKAKTEELSPLNRMGQPEDLAGACLFLC  239 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999865443222   23344556678999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++.+.+++|+.+.+|||+..
T Consensus       240 ~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        240 SEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             ChhhhcccCcEEEEcCCeec
Confidence            99899999999999999754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-42  Score=315.73  Aligned_cols=252  Identities=31%  Similarity=0.445  Sum_probs=227.0

Q ss_pred             CCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            2 YSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         2 ~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      ++|..+++++ ++|||||++|||++++++|+++|++|++++|++++.++..+.+...+.++.++.+|++|++++++++++
T Consensus         1 ~~~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523          1 MSLNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            3566677776 999999999999999999999999999999999888888877776667789999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.+ +++|++|||||.....++.+.+.+.|++++++|+.+++++++++.++|.+++.|+||++||..+..+.++...|
T Consensus        81 ~~~~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  159 (255)
T PRK07523         81 FEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPY  159 (255)
T ss_pred             HHHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccH
Confidence            99988 89999999999987778888899999999999999999999999999988778999999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++|++++.++++++.|++++||+||+|+||++.|++........   .....+....|.+++++|+|+|++++||++++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP---EFSAWLEKRTPAGRWGKVEELVGACVFLASDA  236 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999999999999999999999865443222   23445566789999999999999999999998


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +.+++|+.+.+|||...
T Consensus       237 ~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        237 SSFVNGHVLYVDGGITA  253 (255)
T ss_pred             hcCccCcEEEECCCeec
Confidence            99999999999999754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6e-42  Score=319.77  Aligned_cols=242  Identities=21%  Similarity=0.283  Sum_probs=203.4

Q ss_pred             CeEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.-+...++++|++|+++++++++++.+++ ++
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   88 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW-GK   88 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc-CC
Confidence            499999997  89999999999999999999988742 222223332221235578899999999999999999998 89


Q ss_pred             ccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           89 LNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        89 iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +|++|||||+...    .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||.++..+.+++..|++||
T Consensus        89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159         89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHH
Confidence            9999999998642    46677899999999999999999999999999854  48999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+.+|+++++.|++++||+||+|+||+++|++.........   .........|.+|+++|+|+|++++||+|+++.++
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~i  243 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRY---ILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGV  243 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchH---HHHHHHhCCcccccCCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999987543321111   11222335789999999999999999999999999


Q ss_pred             cccEEEeCCCccccC
Q 035642          245 TGQVICVDGGMTVNG  259 (367)
Q Consensus       245 tG~~i~vdgG~~~~~  259 (367)
                      ||+.+.+|||+...+
T Consensus       244 tG~~i~vdgG~~~~~  258 (272)
T PRK08159        244 TGEVHHVDSGYHVVG  258 (272)
T ss_pred             cceEEEECCCceeec
Confidence            999999999987653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-42  Score=318.03  Aligned_cols=240  Identities=24%  Similarity=0.276  Sum_probs=199.1

Q ss_pred             CeEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||  ++|||+++|++|+++|++|++++|..... +..+++....+...++.+|++|+++++++++++.+++ |+
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~   84 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-DG   84 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-CC
Confidence            39999996  68999999999999999999987642211 2222222211223468899999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCC----C-ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           89 LNLLVNNAAVAVPK----E-ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        89 iD~lI~~Ag~~~~~----~-~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +|++|||||+....    + +.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||.++..+.+++.+|++|
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~as  162 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLA  162 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHH
Confidence            99999999986432    2 345788999999999999999999999999943  4899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+|+++++.|++++||+||+|+||+++|++.......   .+..+.+....|++|+++|+|+|+++.||+|+++.+
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  239 (260)
T PRK06997        163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF---GKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG  239 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch---hhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999875433211   112333445678999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      +||+.+.+|||+..
T Consensus       240 itG~~i~vdgg~~~  253 (260)
T PRK06997        240 VTGEITHVDSGFNA  253 (260)
T ss_pred             cceeEEEEcCChhh
Confidence            99999999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-41  Score=317.82  Aligned_cols=250  Identities=28%  Similarity=0.367  Sum_probs=220.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+++ 
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   85 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF-   85 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5555 99999999999999999999999999999999988888888887666788999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCC---------------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc
Q 035642           87 GKLNLLVNNAAVAVP---------------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV  151 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~---------------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~  151 (367)
                      +++|++|||||...+               .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.|+||++||.++.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            899999999997543               23567789999999999999999999999999988778999999999999


Q ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh--hhhHHHHHHhhcCCCCCCCCHHHH
Q 035642          152 TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP--AKNKIVEGLVSRTPICRPGEPDEV  229 (367)
Q Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~dv  229 (367)
                      .+.++..+|++||+|+++++++++.|++++||+||+|+||++.|++.+......  ...+..+.+....|.+|+++|+|+
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  245 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEEL  245 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHH
Confidence            999999999999999999999999999999999999999999999865432111  111233445567899999999999


Q ss_pred             HHHHHHHhCC-CCCCccccEEEeCCCcccc
Q 035642          230 SSLVAFLCFP-AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       230 A~ai~~L~s~-~~~~itG~~i~vdgG~~~~  258 (367)
                      |++++||+|+ .+.++||+.+.+|||+..+
T Consensus       246 a~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        246 LGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            9999999999 8999999999999998764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=314.70  Aligned_cols=244  Identities=27%  Similarity=0.322  Sum_probs=212.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||++|||++++++|+++|++|++++|+++++++..+++...+ ++.++.+|++|+++++++++++.+++ +++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            69999999999999999999999999999999998888888876543 68889999999999999999999988 89999


Q ss_pred             EEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           92 LVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        92 lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|||||...  ..++.+.+.++|.+.+++|+.+++.+++.++|.|. +++.|+||++||.++..+.++...|++||+|++
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~  159 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV  159 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence            999999753  23566778899999999999999999999999886 455789999999999988888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhH-HHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNK-IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~-~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +++++++.|++++||+||+|+||+++|++.......      ...++ ..+.+....|.+|+++|+|+|++++||+|+++
T Consensus       160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999986431100      00111 22344567799999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      +++||+.+.+|||+..
T Consensus       240 ~~itG~~i~vdgg~~~  255 (259)
T PRK08340        240 EYMLGSTIVFDGAMTR  255 (259)
T ss_pred             ccccCceEeecCCcCC
Confidence            9999999999999753

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.1e-42  Score=318.82  Aligned_cols=233  Identities=39%  Similarity=0.569  Sum_probs=210.5

Q ss_pred             cCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Q 035642           17 GGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLV   93 (367)
Q Consensus        17 Gas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI   93 (367)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+. +.+  ++.+|++++++++++++++.+.++|++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  99999999999999999999999999876666666553 433  5999999999999999999999867899999


Q ss_pred             EcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           94 NNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        94 ~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ||+|....    .++.+.+.++|++.+++|+.+++.+++++.|+|+++  |+||++||.++..+.++...|+++|+|+++
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998765    677888999999999999999999999999988764  899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          170 LTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       170 l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++++|.|+++ +|||||+|+||++.|++......   .++..+......|++|+++|+|||++++||+|+.++++||++
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~---~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~  233 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG---NEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQV  233 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT---HHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEE
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhcccc---ccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCe
Confidence            99999999999 99999999999999998654433   233667778889999999999999999999999999999999


Q ss_pred             EEeCCCcc
Q 035642          249 ICVDGGMT  256 (367)
Q Consensus       249 i~vdgG~~  256 (367)
                      |.||||++
T Consensus       234 i~vDGG~s  241 (241)
T PF13561_consen  234 IPVDGGFS  241 (241)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCcC
Confidence            99999985

...

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-41  Score=313.37  Aligned_cols=240  Identities=23%  Similarity=0.212  Sum_probs=202.6

Q ss_pred             CCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         9 ~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++ +++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~   81 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVRE   81 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHH
Confidence            455 9999999  89999999999999999999999864  3344444444   33567889999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           84 IFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      .+ +++|++|||||+...    .++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.. ..+.+.+..
T Consensus        82 ~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~  157 (256)
T PRK07889         82 HV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDW  157 (256)
T ss_pred             Hc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccch
Confidence            98 899999999998643    35667789999999999999999999999999964  48999998753 455677788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC-CCCCHHHHHHHHHHHhC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~dvA~ai~~L~s  238 (367)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++........   +..+.+....|.+ ++.+|+|+|++++||++
T Consensus       158 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s  234 (256)
T PRK07889        158 MGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFE---LLEEGWDERAPLGWDVKDPTPVARAVVALLS  234 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcH---HHHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999865442211   1233344567887 68999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +.+.+++|+.+.+|||+...
T Consensus       235 ~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        235 DWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             cccccccceEEEEcCceecc
Confidence            99999999999999998754

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-41  Score=310.82  Aligned_cols=242  Identities=28%  Similarity=0.379  Sum_probs=211.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|++++.++++++.+.+ +
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   79 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF-G   79 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            444 9999999999999999999999999999999988777776655   4578899999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|++|||||....... +.+.++|++.+++|+.++++++++++|+|+ ++.|+||++||.++..+.++...|+++|+++
T Consensus        80 ~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~  157 (261)
T PRK08265         80 RVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAI  157 (261)
T ss_pred             CCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            99999999998654433 568899999999999999999999999997 5579999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHH-hhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGL-VSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++++++++.|++++||+||+|+||+++|++.........  +..+.+ ....|.+|+++|+|+|++++||+++.+.+++|
T Consensus       158 ~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG  235 (261)
T PRK08265        158 RQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR--AKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG  235 (261)
T ss_pred             HHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch--hHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccC
Confidence            999999999999999999999999999998754332111  111222 23468899999999999999999998999999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      +.+.+|||+...
T Consensus       236 ~~i~vdgg~~~~  247 (261)
T PRK08265        236 ADYAVDGGYSAL  247 (261)
T ss_pred             cEEEECCCeecc
Confidence            999999998754

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-41  Score=308.74  Aligned_cols=241  Identities=28%  Similarity=0.394  Sum_probs=207.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH----c
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI----F   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~----~   85 (367)
                      ++++||||++|||++++++|+++|++|++++ |+.++.++...++...+.++..+.+|+++.+++..+++++.+.    +
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            4999999999999999999999999998875 6667777777777666667888999999999999999887653    3


Q ss_pred             C-CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 Q-GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~-g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|++|||||+....++.+.+.+.|++++++|+.|+++++++++|.|++  .|+||++||.++..+.++..+|++||
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHHHHH
Confidence            1 37999999999876667788899999999999999999999999999965  38999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.|++++||+||+|+||+++|++.......+.   .........|.+++.+|+|+|+++.||+++.++++
T Consensus       163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  239 (252)
T PRK12747        163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM---MKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV  239 (252)
T ss_pred             HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH---HHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCc
Confidence            999999999999999999999999999999998754322211   11112233478899999999999999999989999


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      +|+.+.+|||+.
T Consensus       240 ~G~~i~vdgg~~  251 (252)
T PRK12747        240 TGQLIDVSGGSC  251 (252)
T ss_pred             CCcEEEecCCcc
Confidence            999999999975

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.7e-41  Score=311.90  Aligned_cols=238  Identities=29%  Similarity=0.431  Sum_probs=208.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.+..           .++.++.||++|+++++++++++.+++ 
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~-   70 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY-   70 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3455 999999999999999999999999999999986432           257789999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+++.+|++||+|
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  150 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA  150 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence            89999999999977778888899999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----Chh-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++++++++.|+++. |+||+|+||+++|++......     .+. .......+....|.+++.+|+|+|++++||+++.
T Consensus       151 l~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        151 VLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999875 999999999999998754321     111 1111233345678999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      +.+++|+.+.+|||....
T Consensus       230 ~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        230 ASFITGECVTVDGGLRAL  247 (258)
T ss_pred             cCCCCCcEEEECCccccC
Confidence            999999999999997654

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-41  Score=308.15  Aligned_cols=248  Identities=29%  Similarity=0.422  Sum_probs=221.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ +++||||+||||.+++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34555 99999999999999999999999999999999988888888877667789999999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||.... .++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence             899999999998654 346778999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.++.++||+||+|+||+++|++........  +...+.+....|.+++++|+|+|+.++||+++.+.++
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~  239 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD--PRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFT  239 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC--hHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999876543211  2244445667888999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.|.+|||+.+
T Consensus       240 ~G~~i~~dgg~~~  252 (253)
T PRK06172        240 TGHALMVDGGATA  252 (253)
T ss_pred             CCcEEEECCCccC
Confidence            9999999999753

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=307.08  Aligned_cols=246  Identities=31%  Similarity=0.436  Sum_probs=220.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ +++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45655 99999999999999999999999999999999988888888887666678889999999999999999999998


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.++|+++||..+..+.++...|++||
T Consensus        84 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         84 -GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             -CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHH
Confidence             89999999999753 3456677899999999999999999999999999888789999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++++++++++.|+.++||+||+|+||+++|++.........   ..+......|.+++.+|+|+|++++||+++...++
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  239 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDA---ILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYT  239 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHH---HHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999998765433222   34455567789999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      +|+.+.+|||+.
T Consensus       240 ~g~~~~~dgg~~  251 (252)
T PRK07035        240 TGECLNVDGGYL  251 (252)
T ss_pred             cCCEEEeCCCcC
Confidence            999999999964

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-41  Score=316.07  Aligned_cols=237  Identities=22%  Similarity=0.301  Sum_probs=209.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ---------TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~---------~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +++|||||++|||+++|++|+++|++|++++|+.         +++++..+++...+.++.++.+|++|++++.++++++
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            4999999999999999999999999999998876         6777777888766778889999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC------CCEEEEecCcccccCCC
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIVFISSVAGVTAAP  155 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~------~g~IV~iSS~~~~~~~~  155 (367)
                      .+.+ |++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|+++.      .|+||++||.++..+.+
T Consensus        87 ~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  165 (286)
T PRK07791         87 VETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV  165 (286)
T ss_pred             HHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC
Confidence            9998 8999999999998777788889999999999999999999999999997532      37999999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC--CCCCHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC--RPGEPDEVSSLV  233 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~ai  233 (367)
                      ++.+|++||+|+++|+++++.|++++||+||+|+|| +.|++....         ........+.+  +..+|+|+|+++
T Consensus       166 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~---------~~~~~~~~~~~~~~~~~pedva~~~  235 (286)
T PRK07791        166 GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV---------FAEMMAKPEEGEFDAMAPENVSPLV  235 (286)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh---------HHHHHhcCcccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999 788875321         11122223433  457999999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCcccc
Q 035642          234 AFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +||+|+.+.+++|+.+.+|||+...
T Consensus       236 ~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        236 VWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             HHHhCchhcCCCCcEEEEcCCceEE
Confidence            9999999999999999999998764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=308.75  Aligned_cols=255  Identities=27%  Similarity=0.463  Sum_probs=227.5

Q ss_pred             CCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            2 YSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         2 ~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      |+|..|++++ +++||||++|||++++++|+++|++|++++|+.+++++..+.+...+.++.++++|++|++++++++++
T Consensus         1 ~~~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (265)
T PRK07097          1 MSENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ   80 (265)
T ss_pred             CCccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            5778888877 999999999999999999999999999999999988888888876677899999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.+ +++|++|||||.....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.++...|
T Consensus        81 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (265)
T PRK07097         81 IEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAY  159 (265)
T ss_pred             HHHhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccH
Confidence            99998 89999999999987777888899999999999999999999999999988778999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC---ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH---DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +++|++++.++++++.++.++||+||+|+||++.|++......   ........+.+....|.+++.+|+|+|.++++++
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA  239 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999998754432   1111112333455678889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++.+.+++|+.+.+|||...
T Consensus       240 ~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        240 SDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             CcccCCCCCCEEEECCCcee
Confidence            98889999999999999654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.3e-40  Score=307.18  Aligned_cols=247  Identities=30%  Similarity=0.410  Sum_probs=218.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++++.+++ +++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            3589999999999999999999999999999999988888888877666788899999999999999999999998 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |++|||||+....++.+.+.+.|++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|++||++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999987777778889999999999999999999999999997654 589999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      .+++.++.|+.++||+||+|+||++.|++.......      .........+....|.+++.+|+|+|+++.||+++.+.
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999987543211      00011123345567899999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      +++|+.+.+|||+..
T Consensus       241 ~~~G~~i~vdgg~~~  255 (256)
T PRK08643        241 YITGQTIIVDGGMVF  255 (256)
T ss_pred             CccCcEEEeCCCeec
Confidence            999999999999764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=314.75  Aligned_cols=243  Identities=25%  Similarity=0.314  Sum_probs=211.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|++|++++.++++++.+.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            444 999999999999999999999999999988753  44555655555556678889999999999999999999998


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||... ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..+|++||
T Consensus       127 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asK  203 (294)
T PRK07985        127 -GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_pred             -CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHH
Confidence             89999999999753 356778899999999999999999999999999864  48999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.|++++||+||+|+||+++|++.......   .+....+....|.+++++|+|+|++++||++++++++
T Consensus       204 aal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~i  280 (294)
T PRK07985        204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT---QDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC---HHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCc
Confidence            9999999999999999999999999999999985322111   1133445567899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||..+
T Consensus       281 tG~~i~vdgG~~~  293 (294)
T PRK07985        281 TAEVHGVCGGEHL  293 (294)
T ss_pred             cccEEeeCCCeeC
Confidence            9999999999764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.5e-40  Score=305.35  Aligned_cols=243  Identities=30%  Similarity=0.433  Sum_probs=212.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+..  ++..+.+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3555 9999999999999999999999999999999753  34444555456678999999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++|||||.....++.+.+.+.|++++++|+.++++++++++++|.+++ .|+||++||..+..+.+....|++||+
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            8999999999998777777888999999999999999999999999997665 689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++++++++.|+.++||+||+|+||+++|++.........   ....+....|.+++.+|+|+|++++||+++.+.+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADED---RNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVN  235 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            99999999999999999999999999999998754432211   223345567889999999999999999999899999


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.+.+|||+.
T Consensus       236 G~~i~~dgg~~  246 (248)
T TIGR01832       236 GYTLAVDGGWL  246 (248)
T ss_pred             CcEEEeCCCEe
Confidence            99999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.3e-41  Score=305.68  Aligned_cols=217  Identities=24%  Similarity=0.321  Sum_probs=199.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||||+|||+++|++|+++|++|++++|++++++++.+++... +.++.++++|+++++++.++.+++.+.. +.|
T Consensus         7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~-~~I   85 (265)
T COG0300           7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG-GPI   85 (265)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC-Ccc
Confidence            49999999999999999999999999999999999999999999864 5788999999999999999999999886 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||....+++.+.++++.++++++|+.++..++++++|.|.+++.|.|||++|.+++.+.|..+.|++||+++.+
T Consensus        86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~  165 (265)
T COG0300          86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLS  165 (265)
T ss_pred             cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      |+.+|+.|+.++||+|.+++||++.|+++.. .....        ....+...+.+|+++|+..+..+
T Consensus       166 fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~~--------~~~~~~~~~~~~~~va~~~~~~l  224 (265)
T COG0300         166 FSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSDV--------YLLSPGELVLSPEDVAEAALKAL  224 (265)
T ss_pred             HHHHHHHHhcCCCeEEEEEecCccccccccc-ccccc--------ccccchhhccCHHHHHHHHHHHH
Confidence            9999999999999999999999999999862 11111        11234456779999999999988

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-41  Score=310.47  Aligned_cols=245  Identities=28%  Similarity=0.373  Sum_probs=209.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+.++++++.+++   +.++.++++|++|+++++++++++.+.+ +
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   79 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF-G   79 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-C
Confidence            344 9999999999999999999999999999999988877766554   4467889999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHH----HHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEY----MSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~----~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      ++|++|||||+... .++.+.+.++    |++++++|+.+++.++++++|.|+++ .|+||++||.++..+.++..+|++
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  158 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTA  158 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHH
Confidence            99999999998643 4555555554    89999999999999999999998765 589999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--C----hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--D----PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--~----~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ||+|+++++++++.|+++ +|+||+|+||+++|++......  .    ...++..+.+....|++|+++|+|+|++++||
T Consensus       159 sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl  237 (263)
T PRK06200        159 SKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL  237 (263)
T ss_pred             HHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhhe
Confidence            999999999999999988 5999999999999998642110  0    01111234455678999999999999999999


Q ss_pred             hCCC-CCCccccEEEeCCCccccC
Q 035642          237 CFPA-ASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       237 ~s~~-~~~itG~~i~vdgG~~~~~  259 (367)
                      +|+. +.+++|+.+.+|||+...+
T Consensus       238 ~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        238 ASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             ecccccCcccceEEEEcCceeecc
Confidence            9988 9999999999999987653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-41  Score=318.13  Aligned_cols=258  Identities=26%  Similarity=0.291  Sum_probs=204.1

Q ss_pred             CCCCCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH----------hcCC-----cEEEEE
Q 035642            4 YVWWSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK----------LKGL-----KVTGSV   65 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~----------~~~~-----~~~~~~   65 (367)
                      |+..++.+ ++|||||+  +|||+++|+.|+++|++|++.++.+ .+....+...          ..+.     ++..+.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            34566667 99999995  9999999999999999999987541 1111100000          0011     011112


Q ss_pred             ccCCCH------------------HHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHH
Q 035642           66 CDLSSR------------------EQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFH  125 (367)
Q Consensus        66 ~Dlsd~------------------~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~  125 (367)
                      +|+++.                  ++++++++++.+++ |++|++|||||...  ..++.+.+.++|++++++|+.|+++
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~  158 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVS  158 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            233322                  46899999999999 89999999999754  4678889999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCEEEEecCcccccCCCCCc-cHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccccC
Q 035642          126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP-LYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRH  203 (367)
Q Consensus       126 l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~-~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~  203 (367)
                      ++++++|+|++  .|+||++||.++..+.++.. .|++||+|+++|+++++.|+++ +|||||+|+||++.|++......
T Consensus       159 l~~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~  236 (299)
T PRK06300        159 LLSHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF  236 (299)
T ss_pred             HHHHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc
Confidence            99999999965  47999999999988888765 8999999999999999999987 59999999999999998654321


Q ss_pred             ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCCCCCCCc
Q 035642          204 DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNA  268 (367)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~~~  268 (367)
                      ...   ..+......|.++..+|+|+|++++||+|+.+.+++|+.+.+|||+...+...+..|+.
T Consensus       237 ~~~---~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  298 (299)
T PRK06300        237 IER---MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEMFPKD  298 (299)
T ss_pred             cHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCccccc
Confidence            111   23334456788999999999999999999999999999999999999988887776653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-40  Score=305.97  Aligned_cols=245  Identities=33%  Similarity=0.441  Sum_probs=208.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.+ +++||||++|||+++|++|+++|++|++++++.+...   +++...  .+.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-   77 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF-   77 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc-
Confidence            3454 9999999999999999999999999998876654322   223222  46788999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~~~~~Y~asKa  165 (367)
                      +++|++|||||+....++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|++||+
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  157 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKA  157 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHH
Confidence            899999999998766677788999999999999999999999999999877789999999998874 4467788999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++++++++.|++++||+||+|+||+++|++..............+.+....|.+++.+|+|+|++++||+++.+.+++
T Consensus       158 a~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  237 (255)
T PRK06463        158 GIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYIT  237 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCC
Confidence            99999999999999999999999999999998754322222222344455678899999999999999999999899999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||....
T Consensus       238 G~~~~~dgg~~~~  250 (255)
T PRK06463        238 GQVIVADGGRIDN  250 (255)
T ss_pred             CCEEEECCCeeec
Confidence            9999999998654

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.1e-40  Score=304.27  Aligned_cols=250  Identities=41%  Similarity=0.611  Sum_probs=223.4

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +|++++ +++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            345565 9999999999999999999999999999999998888888877654  5678899999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +.+ +++|++|||||.....+..+.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|++
T Consensus        84 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         84 DHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            998 8999999999987666777889999999999999999999999999998877899999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +|++++.++++++.|+.++||++|+|+||+++|++.........   ..+......|.+++.+|+|++.++.||+++...
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  239 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPD---YYEQVIERTPMRRVGEPEEVAAAVAFLCMPAAS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998765433322   344445678889999999999999999998888


Q ss_pred             CccccEEEeCCCccccC
Q 035642          243 YITGQVICVDGGMTVNG  259 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~~  259 (367)
                      +++|+.+.+|||...++
T Consensus       240 ~~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        240 YITGQCIAVDGGFLRYG  256 (257)
T ss_pred             cccCCEEEECCCeEeec
Confidence            99999999999987654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6e-40  Score=302.81  Aligned_cols=254  Identities=30%  Similarity=0.461  Sum_probs=226.8

Q ss_pred             CCCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642            1 MYSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         1 ~~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |-.+..+++++ +++||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|+++++++.++++
T Consensus         1 ~~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (256)
T PRK06124          1 MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA   80 (256)
T ss_pred             CCcccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            33455667776 99999999999999999999999999999999988888888887667788999999999999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      ++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++..+
T Consensus        81 ~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (256)
T PRK06124         81 RIDAEH-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAV  159 (256)
T ss_pred             HHHHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccH
Confidence            999988 8999999999987777788889999999999999999999999999998877899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||++++++++.++.|+++.||++|+|+||+++|++.......+.   ....+....|.+++.+|+|++.++++|+++
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  236 (256)
T PRK06124        160 YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPA---VGPWLAQRTPLGRWGRPEEIAGAAVFLASP  236 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            99999999999999999999889999999999999998654322222   334455667889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                      .+.+++|+.+.+|||+..+
T Consensus       237 ~~~~~~G~~i~~dgg~~~~  255 (256)
T PRK06124        237 AASYVNGHVLAVDGGYSVH  255 (256)
T ss_pred             ccCCcCCCEEEECCCcccc
Confidence            9999999999999997653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=8.1e-40  Score=302.05  Aligned_cols=250  Identities=30%  Similarity=0.461  Sum_probs=221.7

Q ss_pred             CCCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642            1 MYSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         1 ~~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |+....+.+++ +++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.+++.++++
T Consensus         1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113          1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CCCccccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            55556677766 99999999999999999999999999999999988888888777666788899999999999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      .+.+.+ +++|++|||||.....++ +.+.+.|++.+++|+.+++++++++.|+|.+.+.++||++||.++..+.++...
T Consensus        81 ~~~~~~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  158 (255)
T PRK06113         81 FALSKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS  158 (255)
T ss_pred             HHHHHc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcch
Confidence            999988 899999999998665544 578899999999999999999999999998777789999999999999889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++++++++.++.+.||+||+|+||+++|++......    ++.........|.+++++|+|+|++++||+++
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  234 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSP  234 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999998754321    11333445667889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcc
Q 035642          240 AASYITGQVICVDGGMT  256 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~  256 (367)
                      .+.+++|+.+.+|||..
T Consensus       235 ~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        235 AASWVSGQILTVSGGGV  251 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            89999999999999954

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-42  Score=289.41  Aligned_cols=241  Identities=31%  Similarity=0.335  Sum_probs=214.8

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +.++.| .+++||+..|||+++++.|++.|++|+.++|+++.+..+.++.   ...+..++.|+++++.+.+.+..+   
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v---   75 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV---   75 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc---
Confidence            345678 9999999999999999999999999999999999998887775   345788889999988877776554   


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                        +++|.++||||+....++.+.+.+.|++.|++|+.+++++.|.....+.. ...|.|||+||.++..+..+...||++
T Consensus        76 --~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcat  153 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCAT  153 (245)
T ss_pred             --CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeec
Confidence              68999999999999999999999999999999999999999997665443 446889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+++|.+|.|+++++||||+++|..+.|.|.+.--.++.   -...+...+|++|+..++++.++++||+|+.+++
T Consensus       154 KaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~---K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssm  230 (245)
T KOG1207|consen  154 KAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD---KKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSM  230 (245)
T ss_pred             HHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCch---hccchhhhCchhhhhHHHHHHhhheeeeecCcCc
Confidence            9999999999999999999999999999999999876544443   3345567899999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      .||.++.++||++.
T Consensus       231 ttGstlpveGGfs~  244 (245)
T KOG1207|consen  231 TTGSTLPVEGGFSN  244 (245)
T ss_pred             ccCceeeecCCccC
Confidence            99999999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-40  Score=304.21  Aligned_cols=247  Identities=29%  Similarity=0.415  Sum_probs=214.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      |++++ +++||||++|||+++++.|+++|++|++++|+.+++++..+++... +.++.++.+|+++++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            34555 9999999999999999999999999999999998888887777653 55788899999999999988865    


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..+.+++.+|+++|
T Consensus        79 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         79 A-GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            3 789999999998777788889999999999999999999999999999887778999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +|+++++++++.|+.++||+||+|+||+++|++........     ...+....+....|.+++.+|+|+|++++||+++
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP  237 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999754321100     0112333445667889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                      .+.+++|+.+.+|||+..+
T Consensus       238 ~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        238 RSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             hhccccCceEEecCCeeec
Confidence            9999999999999997754

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=6.3e-40  Score=310.29  Aligned_cols=243  Identities=30%  Similarity=0.381  Sum_probs=212.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++|||++++++|+++|++|+++.++.+  ..++..+.+...+.++.++.+|+++.++++++++++.+.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            444 9999999999999999999999999999887643  4455666666667788899999999999999999999998


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|+||||||... ..++.+.+.++|++++++|+.|+++++++++|+|.+  .++||++||..+..+.++...|++||
T Consensus       133 -g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        133 -GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHH
Confidence             89999999999853 356778899999999999999999999999999854  47999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.++.++||+||+|+||+++|++.......   .+....+....|.+|+++|+|+|.+++||+++.+.++
T Consensus       210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~---~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~  286 (300)
T PRK06128        210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQP---PEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYV  286 (300)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCC---HHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999999999999999986432111   1234445567899999999999999999999989999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||..+
T Consensus       287 ~G~~~~v~gg~~~  299 (300)
T PRK06128        287 TGEVFGVTGGLLL  299 (300)
T ss_pred             cCcEEeeCCCEeC
Confidence            9999999999754

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=300.26  Aligned_cols=246  Identities=26%  Similarity=0.359  Sum_probs=215.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||++|||+++++.|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   80 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRID   80 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            489999999999999999999999999999999988888877776656688899999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....++.+.+.++|++++++|+.|+++++++++++|.+. ..|+||++||..+..+.++..+|++||+|+++
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            99999998666677788999999999999999999999999998654 36899999999998888888999999999999


Q ss_pred             HHHHHHHHhCC-CCeEEEEEecCcccCCc-cccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          170 LTKHLECEQAK-DNIRANSIAPGVIRTSL-SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       170 l~~~la~e~~~-~gIrvn~I~PG~v~t~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++++++.|+.+ +||+||+|+||+++|+. .......   ++..+.+.+..|.+++.+|+|+|+++.||+++.+.+++|+
T Consensus       161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES---EEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGT  237 (252)
T ss_pred             HHHHHHHHhCcccCeEEEEEeecccccccccccccCC---HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCC
Confidence            99999999975 69999999999999643 2222111   2244555667788999999999999999999888999999


Q ss_pred             EEEeCCCccccCC
Q 035642          248 VICVDGGMTVNGF  260 (367)
Q Consensus       248 ~i~vdgG~~~~~~  260 (367)
                      .+.+|||....+.
T Consensus       238 ~~~~~gg~~~~~~  250 (252)
T PRK07677        238 CITMDGGQWLNQY  250 (252)
T ss_pred             EEEECCCeecCCC
Confidence            9999999877643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.9e-40  Score=307.55  Aligned_cols=247  Identities=28%  Similarity=0.376  Sum_probs=205.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||++|||++++++|+++|++|++++|+.++++++.+.   .+.++.++.+|+++.++++++++++.+.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF-   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-
Confidence            3455 999999999999999999999999999999998777665443   24568889999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCC-CCccCCCH----HHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           87 GKLNLLVNNAAVAVP-KEALDTTA----EYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~-~~~~~~~~----e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      +++|++|||||+... .++.+.+.    +.|++++++|+.++++++++++|+|.+++ |+||++||..+..+.++...|+
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~  156 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYT  156 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhH
Confidence            899999999997532 23333332    57999999999999999999999997654 8999999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC---Chh--hhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH---DPA--KNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~---~~~--~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      +||+|+++|+++++.|++++ |+||+|+||+++|++......   ...  .....+......|++|+++|+|+|++++||
T Consensus       157 ~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l  235 (262)
T TIGR03325       157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFF  235 (262)
T ss_pred             HHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeee
Confidence            99999999999999999986 999999999999998643211   000  001122334567999999999999999999


Q ss_pred             hCCC-CCCccccEEEeCCCccccCC
Q 035642          237 CFPA-ASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       237 ~s~~-~~~itG~~i~vdgG~~~~~~  260 (367)
                      +|+. +.+++|+.+.+|||+...+.
T Consensus       236 ~s~~~~~~~tG~~i~vdgg~~~~~~  260 (262)
T TIGR03325       236 ATRGDTVPATGAVLNYDGGMGVRGF  260 (262)
T ss_pred             ecCCCcccccceEEEecCCeeeccc
Confidence            9874 67899999999999887643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-40  Score=306.73  Aligned_cols=236  Identities=25%  Similarity=0.361  Sum_probs=200.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      |+++++|||| ||||+++|++|+ +|++|++++|+.+++++..+++...+.++.++.+|++|++++.++++++ +++ ++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~   76 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GP   76 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CC
Confidence            4569999998 699999999996 8999999999998888887777666668889999999999999999988 456 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------------  154 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--------------  154 (367)
                      +|++|||||+..       ..++|++++++|+.|++++++++.|+|.++  |++|++||.++..+.              
T Consensus        77 id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         77 VTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             CCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccc
Confidence            999999999752       236789999999999999999999999653  778999998876542              


Q ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC
Q 035642          155 ----------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT  218 (367)
Q Consensus       155 ----------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (367)
                                      +++.+|++||+|+++++++++.|++++|||||+|+||+++|++........ ..+..+.+....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~  226 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGP-RGDGYRNMFAKS  226 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCC-chHHHHHHhhhC
Confidence                            246789999999999999999999999999999999999999864321111 111233445567


Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          219 PICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       219 p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |.+|+++|+|+|++++||+|+.++++||+.+.+|||....
T Consensus       227 p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        227 PAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             CcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            9999999999999999999999999999999999997654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=300.90  Aligned_cols=246  Identities=26%  Similarity=0.329  Sum_probs=208.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++++ ++|||||++|||++++++|+++|++|++++|+. ..++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            33555 999999999999999999999999999999985 3445566666556778899999999999999999999988


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..  .+..+|++||
T Consensus        83 -~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK  159 (260)
T PRK12823         83 -GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAK  159 (260)
T ss_pred             -CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHH
Confidence             89999999999653 4567788999999999999999999999999999887789999999987642  3456899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc------cC--ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI------RH--DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~------~~--~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      +|++.|+++++.|++++||+||+|+||+++||+....      ..  ....++..+......|++++++|+|+|++++||
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  239 (260)
T PRK12823        160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFL  239 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999863211      00  011122344455678999999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCcc
Q 035642          237 CFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~  256 (367)
                      +++.+.+++|+.+.+|||..
T Consensus       240 ~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        240 ASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             cCcccccccCcEEeecCCCC
Confidence            99989999999999999863

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=301.49  Aligned_cols=246  Identities=30%  Similarity=0.438  Sum_probs=214.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||++|||++++++|+++|++|++++|+.+ ..+..+++...+.++.++.+|++++++++++++++.+++ +++|
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   84 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-GRID   84 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            49999999999999999999999999999999875 444455555556678899999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc-ccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~-~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....++.+.+.+.+++.+++|+.++++++++++++|.+.+.++||++||..+ ..+.+++..|+++|+++++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~  164 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG  164 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence            999999987777778889999999999999999999999999998777789999999887 4566788899999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCC---hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD---PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++++++.++.++||+||+|+||+++|++.......   ....+....+....|.+++.+|+|+|+++.||+++.+.+++|
T Consensus       165 ~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g  244 (263)
T PRK08226        165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTG  244 (263)
T ss_pred             HHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcC
Confidence            99999999998899999999999999987643211   112234455666789999999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      +.+.+|||..+.
T Consensus       245 ~~i~~dgg~~~~  256 (263)
T PRK08226        245 TQNVIDGGSTLP  256 (263)
T ss_pred             ceEeECCCcccC
Confidence            999999997654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-39  Score=299.76  Aligned_cols=238  Identities=30%  Similarity=0.371  Sum_probs=210.5

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCC-----------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRN-----------QTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~-----------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      +++ ++|||||+  +|||+++|++|+++|++|++++|+           .++..+..+++...+.++.++.+|+++++++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            455 99999999  499999999999999999987643           2334455566666677899999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      .++++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||.++..+.
T Consensus        84 ~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (256)
T PRK12859         84 KELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM  162 (256)
T ss_pred             HHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence            99999999988 89999999999877778888999999999999999999999999999987778999999999999888


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      +++.+|++||+++++|+++++.+++++||+||+|+||+++|++...     .   ..+.+....|.+++.+|+|+|++++
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~---~~~~~~~~~~~~~~~~~~d~a~~~~  234 (256)
T PRK12859        163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----E---IKQGLLPMFPFGRIGEPKDAARLIK  234 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----H---HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999986431     1   2333455678889999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCc
Q 035642          235 FLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ||+++.+.+++|+.+.+|||+
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        235 FLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHhCccccCccCcEEEeCCCc
Confidence            999999999999999999995

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=300.15  Aligned_cols=240  Identities=27%  Similarity=0.406  Sum_probs=215.0

Q ss_pred             CeEEEEcCCC-hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTR-GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KG-LKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~-GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~-~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++++||||+| |||+++++.|+++|++|++++|+.+++++..+++.. .+ .++.++++|++++++++++++++.+.+ +
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   96 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL-G   96 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4999999985 999999999999999999999999888887777765 23 468889999999999999999999888 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|+..+ .|+||++||..+..+.++...|++||+|
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaa  176 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAG  176 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHH
Confidence            999999999987777788889999999999999999999999999998765 7899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.|++++||+||+|+||+++|++......    ++..+.+....|++|+++|+|+|++++||+++.++++||
T Consensus       177 l~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~----~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG  252 (262)
T PRK07831        177 VMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS----AELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTG  252 (262)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            9999999999999999999999999999998654321    223444556778999999999999999999999999999


Q ss_pred             cEEEeCCCc
Q 035642          247 QVICVDGGM  255 (367)
Q Consensus       247 ~~i~vdgG~  255 (367)
                      +.+.+|+|+
T Consensus       253 ~~i~v~~~~  261 (262)
T PRK07831        253 EVVSVSSQH  261 (262)
T ss_pred             ceEEeCCCC
Confidence            999999975

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-39  Score=299.05  Aligned_cols=246  Identities=28%  Similarity=0.397  Sum_probs=216.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +++||||++|||++++++|+++|++|++++|+. +..+...+++...+.++.++.+|++|.+++.++++++.+.+ 
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-   83 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF-   83 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            455 999999999999999999999999999988854 45566666776666778899999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++|||||.....++.+.+.+.|++++++|+.+++++++.++++|.+.+ .|+||++||..+..+.++..+|++||+
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  163 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKG  163 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHH
Confidence            8999999999987777777889999999999999999999999999997754 589999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++++++++.++.++||+||+|+||+++|++.......+.   .........|.+++.+|+|+|+.+.||+++.+.+++
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        164 GVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPK---QRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999999999999999998653222222   333445677899999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||..+.
T Consensus       241 G~~i~~d~g~~~~  253 (261)
T PRK08936        241 GITLFADGGMTLY  253 (261)
T ss_pred             CcEEEECCCcccC
Confidence            9999999997743

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=299.58  Aligned_cols=238  Identities=27%  Similarity=0.430  Sum_probs=209.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.++        ...+.++.++.+|++++++++++++.+.+.+ 
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   73 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH-   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4555 99999999999999999999999999999998754        1124568889999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++|||||+....++.+.+.+.|++++++|+.+++.+++++.++|.++ +.|+||++||.++..+.++...|++||+
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKA  153 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence            899999999998776777788999999999999999999999999999764 4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++|+++++.|++++ |++|+|+||+++|++........   +....+....|.+++++|+|+|++++||+++.+++++
T Consensus       154 a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~  229 (252)
T PRK07856        154 GLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDA---EGIAAVAATVPLGRLATPADIAWACLFLASDLASYVS  229 (252)
T ss_pred             HHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCH---HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            9999999999999987 99999999999999865432221   2334455678899999999999999999999899999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.|.+|||....
T Consensus       230 G~~i~vdgg~~~~  242 (252)
T PRK07856        230 GANLEVHGGGERP  242 (252)
T ss_pred             CCEEEECCCcchH
Confidence            9999999997664

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-39  Score=298.55  Aligned_cols=243  Identities=24%  Similarity=0.363  Sum_probs=213.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++.++..+++   +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF-GGID   82 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            39999999999999999999999999999999998877766655   3468889999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....++.+.+.++|+.++++|+.+++++++++.++|.+++ .++||++||..+..+.++..+|++||++++.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVIS  162 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHH
Confidence            999999987777778889999999999999999999999999987653 5899999999998898999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++++++.|+.++||+||+|+||+++|++......      .....+....+....|.+++.+|+|+|++++||+++.+++
T Consensus       163 ~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  242 (257)
T PRK07067        163 YTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADY  242 (257)
T ss_pred             HHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999997653211      0001123334556789999999999999999999998999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||..+
T Consensus       243 ~~g~~~~v~gg~~~  256 (257)
T PRK07067        243 IVAQTYNVDGGNWM  256 (257)
T ss_pred             ccCcEEeecCCEeC
Confidence            99999999999654

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=309.18  Aligned_cols=240  Identities=21%  Similarity=0.251  Sum_probs=197.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh----------hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ----------TELNERLQEWKLKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~----------~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      ++++ +++||||++|||+++|++|+++|++|++++|+.          ++++++.+++...+.++.++.+|++|++++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            3555 999999999999999999999999999999984          45566666676666678889999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcC-CCCC----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc
Q 035642           77 LMETVSSIFQGKLNLLVNNA-AVAV----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV  151 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~A-g~~~----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~  151 (367)
                      +++++.+.+ |++|++|||| |...    ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+.
T Consensus        85 ~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~  163 (305)
T PRK08303         85 LVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE  163 (305)
T ss_pred             HHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence            999999999 8999999999 7531    246667788999999999999999999999999987767999999997664


Q ss_pred             c---CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-CCCCCCHH
Q 035642          152 T---AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-ICRPGEPD  227 (367)
Q Consensus       152 ~---~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~  227 (367)
                      .   +.++..+|++||+|+.+|+++++.|++++|||||+|+||++.|++......... ..... .....| .++..+|+
T Consensus       164 ~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~-~~~~~-~~~~~p~~~~~~~pe  241 (305)
T PRK08303        164 YNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTE-ENWRD-ALAKEPHFAISETPR  241 (305)
T ss_pred             ccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCc-cchhh-hhccccccccCCCHH
Confidence            3   234567899999999999999999999999999999999999998532211000 00111 122346 47788999


Q ss_pred             HHHHHHHHHhCCCC-CCccccEEE
Q 035642          228 EVSSLVAFLCFPAA-SYITGQVIC  250 (367)
Q Consensus       228 dvA~ai~~L~s~~~-~~itG~~i~  250 (367)
                      |+|++++||+++.. .++||+.+.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            99999999999874 589999865

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.1e-39  Score=301.36  Aligned_cols=249  Identities=23%  Similarity=0.279  Sum_probs=210.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++++|++|+++++++++.+.+.+ 
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-   92 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKF-   92 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHh-
Confidence            4555 999999999999999999999999999999998877777666632 4578899999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           87 GKLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +++|++|||||....  .++.+.+.++|++++++|+.|++++++++.++|.+++.|+||++||.++..+.++..+|++||
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHH
Confidence            899999999998643  356778899999999999999999999999999877779999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHH----HHhhcCCC-CCCCCHHHHHHHHHHHhC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVE----GLVSRTPI-CRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~----~~~~~~p~-~~~~~~~dvA~ai~~L~s  238 (367)
                      +|+++++++++.|++++||+||+|+||+++|++......... ......    ......+. ++..+|+|+|++++||++
T Consensus       173 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s  252 (280)
T PLN02253        173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS  252 (280)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcC
Confidence            999999999999999999999999999999997543221111 011111    11222333 566899999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +.+.+++|+.+.+|||+...
T Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        253 DEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             cccccccCcEEEECCchhhc
Confidence            99999999999999997653

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=6.3e-39  Score=296.39  Aligned_cols=243  Identities=28%  Similarity=0.403  Sum_probs=214.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+++|||||++|||++++++|+++|++|+++.+ +.+.++.+.+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            358999999999999999999999999988764 5666777777777667789999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|++|||||.....++.+.+.++|++++++|+.+++++++++.++|.+++ .|+||++||..+..+.++...|+++|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            99999999987766777889999999999999999999999999996653 58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++++++++.++.++||++|+|+||+++|++.....  .   +.........|.++..+|+|+|+++.|++++.+.+++|+
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  235 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--S---DVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ  235 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--h---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCc
Confidence            99999999999999999999999999999864321  1   122333456788899999999999999999989999999


Q ss_pred             EEEeCCCcccc
Q 035642          248 VICVDGGMTVN  258 (367)
Q Consensus       248 ~i~vdgG~~~~  258 (367)
                      .+.+|||..+.
T Consensus       236 ~~~~dgg~~~~  246 (256)
T PRK12743        236 SLIVDGGFMLA  246 (256)
T ss_pred             EEEECCCcccc
Confidence            99999997754

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-39  Score=295.86  Aligned_cols=243  Identities=31%  Similarity=0.403  Sum_probs=212.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||++++++|+++|++|++++|+.+.. +...++.  +.++.++.+|+++++++.++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            44555 999999999999999999999999999999987643 3333332  3457789999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||.....++.+.+.++|++++++|+.|++++++++.++|++++.++||++||..+..+.++..+|++||+
T Consensus        88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence             8999999999988767777788999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++++++++.|++++||+||+|+||+++|++........    ....+....|.+++.+|+|+|+++++|+++.+.+++
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  242 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGE----KGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMIT  242 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchh----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999999865432111    223345567889999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+.+
T Consensus       243 G~~i~~dgg~~~  254 (255)
T PRK06841        243 GENLVIDGGYTI  254 (255)
T ss_pred             CCEEEECCCccC
Confidence            999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2e-39  Score=301.16  Aligned_cols=240  Identities=28%  Similarity=0.407  Sum_probs=204.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.++.+         ..++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45555 9999999999999999999999999999999876432         2367788999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCC---------ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC
Q 035642           86 QGKLNLLVNNAAVAVPKE---------ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~---------~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~  156 (367)
                       +++|++|||||......         ..+.+.++|++++++|+.+++++++++.++|.+++.|+||++||.++..+.++
T Consensus        76 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (266)
T PRK06171         76 -GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG  154 (266)
T ss_pred             -CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence             89999999999754322         34578999999999999999999999999998877899999999999999899


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CCccccccC-------ChhhhHHHHHHhh--cCCCCCCCCH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRH-------DPAKNKIVEGLVS--RTPICRPGEP  226 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~-------~~~~~~~~~~~~~--~~p~~~~~~~  226 (367)
                      ..+|++||+++++++++++.|++++||+||+|+||++. |++......       ........+.+..  ..|++|+++|
T Consensus       155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  234 (266)
T PRK06171        155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKL  234 (266)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCH
Confidence            99999999999999999999999999999999999997 665331110       0011122333434  6799999999


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|||+++.||+|+.++++||+.+.+|||+.
T Consensus       235 ~eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        235 SEVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             HHhhhheeeeeccccccceeeEEEecCccc
Confidence            999999999999999999999999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.6e-39  Score=325.72  Aligned_cols=240  Identities=32%  Similarity=0.509  Sum_probs=212.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++..+.+|++|+++++++++++.+.+ |++|
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id  345 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW-GRLD  345 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            39999999999999999999999999999999988887776655   4567788999999999999999999999 8999


Q ss_pred             EEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||... ..++.+.+.++|++++++|+.|+++++++++|+|  .+.|+||++||.++..+.++..+|++||+++++
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  423 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTM  423 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence            9999999864 3567788999999999999999999999999999  345899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      |+++++.|++++||+||+|+||+++|++........  ....+.+.+..|.+++.+|+|+|++++||+++.+.+++|+.+
T Consensus       424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i  501 (520)
T PRK06484        424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASG--RADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATL  501 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcccc--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            999999999999999999999999999875432211  112344556778999999999999999999998999999999


Q ss_pred             EeCCCcccc
Q 035642          250 CVDGGMTVN  258 (367)
Q Consensus       250 ~vdgG~~~~  258 (367)
                      .+|||+...
T Consensus       502 ~vdgg~~~~  510 (520)
T PRK06484        502 TVDGGWTAF  510 (520)
T ss_pred             EECCCccCC
Confidence            999997554

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=292.56  Aligned_cols=252  Identities=28%  Similarity=0.451  Sum_probs=221.3

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |..+++++ ++|||||+||||++++++|+++|++|++++|+.++++++.+.+...+.++.++.+|+++++++.++++++.
T Consensus         3 ~~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (263)
T PRK07814          3 LDRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAV   82 (263)
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34456666 99999999999999999999999999999999988888887776656678899999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      +.+ +++|++|||||......+.+.+.++++.++++|+.+++++++++.++|.+ .+.|+||++||..+..+.++...|+
T Consensus        83 ~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  161 (263)
T PRK07814         83 EAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYG  161 (263)
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhH
Confidence            988 89999999999876677778899999999999999999999999999976 4678999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+++++++++++.|+.+ +|++|+|+||++.|++........   +....+....|..+..+|+|+|++++|++++.+
T Consensus       162 ~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  237 (263)
T PRK07814        162 TAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAAND---ELRAPMEKATPLRRLGDPEDIAAAAVYLASPAG  237 (263)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999987 699999999999999765432222   234444556788889999999999999999888


Q ss_pred             CCccccEEEeCCCccccCC
Q 035642          242 SYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~~~  260 (367)
                      .+++|+.+.+|||......
T Consensus       238 ~~~~g~~~~~~~~~~~~~~  256 (263)
T PRK07814        238 SYLTGKTLEVDGGLTFPNL  256 (263)
T ss_pred             cCcCCCEEEECCCccCCCC
Confidence            8999999999999776433

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-39  Score=295.41  Aligned_cols=240  Identities=27%  Similarity=0.371  Sum_probs=204.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.+..         .+.++.++.+|++|+++++++++++.+.+ 
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL-   75 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc-
Confidence            4555 999999999999999999999999999999986531         13467889999999999999999999988 


Q ss_pred             CCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-CCccHHHH
Q 035642           87 GKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LTPLYGPY  163 (367)
Q Consensus        87 g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-~~~~Y~as  163 (367)
                      +++|++|||||...  ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.+ +...|++|
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~s  155 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAA  155 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHH
Confidence            89999999999753  3456677899999999999999999999999999887779999999999888755 78899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHH---HHhhcCCCCCCCCHHHHHHHHH
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVE---GLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~---~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      |+++++++++++.+++++||++|+|+||+++|++.......      ....+..+   ......|.+++++|+|+|+++.
T Consensus       156 K~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~  235 (260)
T PRK06523        156 KAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIA  235 (260)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999986432110      00011111   1124578999999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ||+++.+++++|+.+.+|||...
T Consensus       236 ~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        236 FLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHhCcccccccCceEEecCCccC
Confidence            99999899999999999999754

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=289.95  Aligned_cols=232  Identities=19%  Similarity=0.280  Sum_probs=199.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||++|||++++++|+++|++|++++|+.+...   +.+...+  +.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence            458999999999999999999999999999999876543   2333223  5678999999999999999999988 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      |++|||||........+.+.++|++++++|+.+++.+++.+++.|++.+  .|+||++||..+..+.++..+|++||+++
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999986555556778999999999999999999999999998765  68999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++++++++.|+++ +||||+|+||++.|+...    ..   ...+......|.+|..+|+|+|+++.||++  +.+++|+
T Consensus       156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~  225 (236)
T PRK06483        156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DA---AYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGR  225 (236)
T ss_pred             HHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CH---HHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCc
Confidence            9999999999988 599999999999775321    11   123334456788999999999999999995  6899999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      .+.+|||..+
T Consensus       226 ~i~vdgg~~~  235 (236)
T PRK06483        226 SLPVDGGRHL  235 (236)
T ss_pred             EEEeCccccc
Confidence            9999999765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-38  Score=290.70  Aligned_cols=239  Identities=27%  Similarity=0.371  Sum_probs=204.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC-
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK-   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~-   88 (367)
                      +++|||||+||||+++++.|+++|++|+++++ +.++.+.+..++   +.++.++.+|+++++++.++++++.+.+ ++ 
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~   81 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF-GKP   81 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence            49999999999999999999999999988655 555555544443   3578889999999999999999998888 65 


Q ss_pred             ccEEEEcCCCCC------CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           89 LNLLVNNAAVAV------PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        89 iD~lI~~Ag~~~------~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +|++|||||...      ..++.+.+.++|++++++|+.++++++++++++|.+.+.|+||++||..+..+..+...|++
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  161 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTT  161 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHH
Confidence            999999998642      23566778999999999999999999999999998777799999999887777777889999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++++++++++++++||+||+|+||+++|+.......    ++....+....|.+++.+|+|+|+++.||+++.+.
T Consensus       162 sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  237 (253)
T PRK08642        162 AKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP----DEVFDLIAATTPLRKVTTPQEFADAVLFFASPWAR  237 (253)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC----HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999999986543211    12344455678899999999999999999999899


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      +++|+.+.+|||+..
T Consensus       238 ~~~G~~~~vdgg~~~  252 (253)
T PRK08642        238 AVTGQNLVVDGGLVM  252 (253)
T ss_pred             CccCCEEEeCCCeec
Confidence            999999999999643

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=292.95  Aligned_cols=246  Identities=27%  Similarity=0.419  Sum_probs=213.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ +++||||+||||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45555 99999999999999999999999999999999888877777776656677889999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|+++|+
T Consensus        85 -~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~  162 (264)
T PRK07576         85 -GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKA  162 (264)
T ss_pred             -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHH
Confidence             899999999998766677788999999999999999999999999999755 489999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++|+++++.|+.++||+|++|+||+++ |+..........   ....+....|.+++.+|+|+|+.+++++++.+.++
T Consensus       163 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  239 (264)
T PRK07576        163 GVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPE---LQAAVAQSVPLKRNGTKQDIANAALFLASDMASYI  239 (264)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence            99999999999999999999999999997 554333222111   22233455788899999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       240 ~G~~~~~~gg~~~  252 (264)
T PRK07576        240 TGVVLPVDGGWSL  252 (264)
T ss_pred             cCCEEEECCCccc
Confidence            9999999999754

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-38  Score=292.19  Aligned_cols=245  Identities=26%  Similarity=0.292  Sum_probs=214.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d   84 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-GRVD   84 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-CCcc
Confidence            499999999999999999999999999999999988888888877666788999999999999999999999998 8999


Q ss_pred             EEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.... .++.+.+.++|++++++|+.|++.+++++.++|.+. .++||++||..+..+.++...|+++|++++.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  163 (258)
T PRK07890         85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGALLA  163 (258)
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence            99999998644 566778899999999999999999999999998765 4799999999999888999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++++++.+++++||++|+|+||++.|++.......      .........+.+..|.+++.+|+|+|++++|++++.+.+
T Consensus       164 l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~  243 (258)
T PRK07890        164 ASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARA  243 (258)
T ss_pred             HHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhC
Confidence            99999999999999999999999999975432110      011223444455678889999999999999999987889


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||...
T Consensus       244 ~~G~~i~~~gg~~~  257 (258)
T PRK07890        244 ITGQTLDVNCGEYH  257 (258)
T ss_pred             ccCcEEEeCCcccc
Confidence            99999999999754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.5e-38  Score=289.69  Aligned_cols=243  Identities=28%  Similarity=0.416  Sum_probs=216.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||+||||++++++|+++|++|++ .+|+.++.+++.++++..+.++.++.+|++|++++.++++++.+.+ +++
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   83 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-GRL   83 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            39999999999999999999999999876 5888888888888887767789999999999999999999999998 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||.....++.+.+.+.++..+++|+.+++++++++.++|++++.|+||++||..+..+.++...|++||+++++
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  163 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA  163 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence            99999999877778888899999999999999999999999999988888999999999888888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++.+.||++|+|+||++.|++........   ..........|.+++.+++|+|+++++++++...+++|+.+
T Consensus       164 ~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK08063        164 LTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNRE---ELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHhHhCeEEEeEecCcccCchhhhccCch---HHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            999999999989999999999999999865433222   23444455677788999999999999999888888999999


Q ss_pred             EeCCCccc
Q 035642          250 CVDGGMTV  257 (367)
Q Consensus       250 ~vdgG~~~  257 (367)
                      .+|||..+
T Consensus       241 ~~~gg~~~  248 (250)
T PRK08063        241 IVDGGRSL  248 (250)
T ss_pred             EECCCeee
Confidence            99999764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=292.15  Aligned_cols=251  Identities=27%  Similarity=0.309  Sum_probs=213.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.++. +..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            56776 999999999999999999999999999999998776 6666776667788999999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||......+.+.. ++|+..+++|+.+++++++.+.|+|++. .|+||++||..+..+.++..+|++||+
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence             8999999999976554444444 9999999999999999999999998754 589999999999998889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCC-CCCCHHHHHHHHHHHhCCCCCC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~-~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++++++++++.|+.++||++|+|+||.++|++....... .........+....|.+ ++.+|+|+|++++|++++.+.+
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence            999999999999998999999999999999976432111 11111233334455664 7899999999999999998899


Q ss_pred             ccccEEEeCCCccccCCC
Q 035642          244 ITGQVICVDGGMTVNGFN  261 (367)
Q Consensus       244 itG~~i~vdgG~~~~~~~  261 (367)
                      ++|+.+.+|||++.....
T Consensus       239 ~~g~~~~~~gg~~~~~~~  256 (258)
T PRK08628        239 TTGQWLFVDGGYVHLDRA  256 (258)
T ss_pred             ccCceEEecCCccccccc
Confidence            999999999998765443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-38  Score=291.76  Aligned_cols=247  Identities=23%  Similarity=0.278  Sum_probs=214.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++++|||||++|||++++++|+++|++|++++|+.++.++..+.+....  .++.++.+|+++++++.++++++.+.+ +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4589999999999999999999999999999999888877777665432  468899999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.....++.+.+.++|++.+++|+.|++++++++.+.|.+++ .++||++||.++..+.+...+|++||+|
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999988777788889999999999999999999999999998766 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcc-cCCccccccCCh------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVI-RTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v-~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++++++.|++++||+||+|+||.+ .|++.....+..      ..++..+......|.+++.+++|++++++||+++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999975 666543221110      1122334445678999999999999999999998


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      .+.+++|+.+.+|||..+
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            888999999999999764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.4e-38  Score=288.52  Aligned_cols=241  Identities=27%  Similarity=0.412  Sum_probs=213.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||++|||++++++|+++|++|++. +++....++..+++...+.++..+.+|++|.+++.++++++.+.+ +++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   82 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-GEI   82 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence            389999999999999999999999998874 455566666666666667778888999999999999999999988 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||.....++.+.+.++|++++++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~  162 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG  162 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence            99999999876667778899999999999999999999999999988778999999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++.++||++|+|+||++.|++.....     ++..+.+....|.+++.+++|+++++.||+++.+.+++|+.+
T Consensus       163 ~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        163 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-----PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-----hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            999999999999999999999999999875432     123444555678889999999999999999998999999999


Q ss_pred             EeCCCccc
Q 035642          250 CVDGGMTV  257 (367)
Q Consensus       250 ~vdgG~~~  257 (367)
                      .+|||..+
T Consensus       238 ~~~~g~~~  245 (246)
T PRK12938        238 SLNGGLHM  245 (246)
T ss_pred             EECCcccC
Confidence            99999643

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.6e-38  Score=287.21  Aligned_cols=236  Identities=29%  Similarity=0.409  Sum_probs=209.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++||||++|||+++|++|+++|++|++++|+ .+..+...+++...+.++.++.+|++|++++.++++++.+.+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            5899999999999999999999999988865 456667777776667789999999999999999999998888 89999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHH-HHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH-PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~-~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +|||||.....++.+.+.++|+.++++|+.++++++++++ |.+++++.|+||++||.++..+.++...|+++|++++++
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            9999998877777778899999999999999999999875 566656678999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      +++++.|+.++||++|+|+||+++|++......      .........|++++++|+|+|++++||+++.+.+++|+.+.
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  233 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEH------DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVIS  233 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhhH------HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            999999999999999999999999998764321      22334456899999999999999999999999999999999


Q ss_pred             eCCCc
Q 035642          251 VDGGM  255 (367)
Q Consensus       251 vdgG~  255 (367)
                      +|||.
T Consensus       234 ~~gg~  238 (239)
T TIGR01831       234 VNGGM  238 (239)
T ss_pred             ecCCc
Confidence            99995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-38  Score=288.82  Aligned_cols=243  Identities=26%  Similarity=0.372  Sum_probs=216.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.+ +++||||+||||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA-   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence            3555 99999999999999999999999999999999998888888776666678899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--------CCEEEEecCcccccCCCCCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--------NGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--------~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +++|++|||||.....++.+.+.++|+.++++|+.+++++++++.+.|.++.        .++||++||..+..+.+...
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            8999999999987767777788999999999999999999999999987553        47999999999988888889


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|+++|++++.++++++.+++++||+||+|+||+++|++........    ....+....|.++++.|+|+|+++.||++
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~l~~  240 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE----QGQKLVSMLPRKRVGKPEDLDGLLLLLAA  240 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999875432211    22345566788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCc
Q 035642          239 PAASYITGQVICVDGGM  255 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~  255 (367)
                      +.+.+++|+.+.+|||+
T Consensus       241 ~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        241 DESQFINGAIISADDGF  257 (258)
T ss_pred             hhhcCCCCcEEEeCCCC
Confidence            99999999999999996

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6.8e-38  Score=288.13  Aligned_cols=243  Identities=24%  Similarity=0.284  Sum_probs=212.2

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.|++++ ++|||||++|||++++++|+++|++|++++|+.         ....+.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3466666 999999999999999999999999999999986         122355788999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      .+ +++|++|||||.....++.+.+.+++++.+++|+.+++++++++.++|++++.|+||++||..+..+.++..+|++|
T Consensus        73 ~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  151 (252)
T PRK08220         73 ET-GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGAS  151 (252)
T ss_pred             Hc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHH
Confidence            98 89999999999887777788899999999999999999999999999988778999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh-----hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-----NKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      |++++.++++++.|++++||+||+|+||+++|++..........     ....+.+....|.+++.+|+|+|++++||++
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999986543221110     0112334456788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      +...+++|+.+.+|||..+
T Consensus       232 ~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        232 DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhcCccCcEEEECCCeec
Confidence            9899999999999999765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-38  Score=292.64  Aligned_cols=192  Identities=30%  Similarity=0.370  Sum_probs=176.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GL-KVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~-~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+.+ +|+|||||+|||.++|.+|+++|++++++.|..++++...+++++. .. ++..++||++|.+++.++++++..+
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            3445 9999999999999999999999999999999999999998888764 23 4899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      | |++|+||||||+.......+.+.++++.+|++|+.|+..++++++|+|++++.|+||++||++|..+.|..+.|+|||
T Consensus        89 f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK  167 (282)
T KOG1205|consen   89 F-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASK  167 (282)
T ss_pred             c-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHH
Confidence            9 999999999999886677778899999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCC--eEEEEEecCcccCCccccc
Q 035642          165 GAMNQLTKHLECEQAKDN--IRANSIAPGVIRTSLSDAI  201 (367)
Q Consensus       165 aal~~l~~~la~e~~~~g--Irvn~I~PG~v~t~~~~~~  201 (367)
                      +|+++|+.+|+.|+.+.+  |++ .|+||+|+|++....
T Consensus       168 ~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  168 HALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             HHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            999999999999999876  666 999999999976543

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=284.43  Aligned_cols=242  Identities=28%  Similarity=0.396  Sum_probs=218.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   86 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL-GGLD   86 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            499999999999999999999999999999999988888888876666789999999999999999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.+.++..+++|+.+++++++++.++|.+++.|+||++||..+..+.+....|+++|++++++
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~  166 (250)
T PRK12939         87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGM  166 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHH
Confidence            99999998877777788999999999999999999999999999887789999999999998888889999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      ++.++.++++.+|++++|+||+++|++.......    .....+....|..++.+++|+|+++++++++..++++|+.|.
T Consensus       167 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  242 (250)
T PRK12939        167 TRSLARELGGRGITVNAIAPGLTATEATAYVPAD----ERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLP  242 (250)
T ss_pred             HHHHHHHHhhhCEEEEEEEECCCCCccccccCCh----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEE
Confidence            9999999998899999999999999987653321    133444556788899999999999999998888899999999


Q ss_pred             eCCCccc
Q 035642          251 VDGGMTV  257 (367)
Q Consensus       251 vdgG~~~  257 (367)
                      +|||..+
T Consensus       243 ~~gg~~~  249 (250)
T PRK12939        243 VNGGFVM  249 (250)
T ss_pred             ECCCccc
Confidence            9999765

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.5e-37  Score=286.17  Aligned_cols=246  Identities=30%  Similarity=0.454  Sum_probs=217.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+.+ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            379999999999999999999999999999999888888888877667788999999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      +||||||.....++.+.+.++|++++++|+.+++.+++++++.|++.+ .++||++||..+..+.++...|++||+++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999998777788889999999999999999999999999998764 4899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh------hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA------KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++++++.++++.||+|++++||+++|++.........      .......+....|.+++.+|+|+++++.||+++.+.+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            9999999999999999999999999998654322110      0112334456678899999999999999999998999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||+..
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.9e-37  Score=286.25  Aligned_cols=242  Identities=27%  Similarity=0.349  Sum_probs=208.2

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +..++++ +++||||+||||+++|++|+++|++|++++|+.++.++..+++   +.++.++.+|+++.++++++++++.+
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4455666 9999999999999999999999999999999987766655443   45688999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           84 IFQGKLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      .+ +++|++|||||....  .++.+.+.++|+..+++|+.+++++++++.|+|.+. .|+||++||.++..+.++..+|+
T Consensus        81 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~  158 (255)
T PRK05717         81 QF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYA  158 (255)
T ss_pred             Hh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchH
Confidence            88 899999999998643  456677899999999999999999999999999765 48999999999999988999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++++++++.++++ +|+||+|+||+++|++.......    ..........|.++.++|+|+|.++.+++++.+
T Consensus       159 ~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  233 (255)
T PRK05717        159 ASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAE----PLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQA  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccch----HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999987 59999999999999975432111    122222345688999999999999999999888


Q ss_pred             CCccccEEEeCCCcc
Q 035642          242 SYITGQVICVDGGMT  256 (367)
Q Consensus       242 ~~itG~~i~vdgG~~  256 (367)
                      .+++|+.+.+|||..
T Consensus       234 ~~~~g~~~~~~gg~~  248 (255)
T PRK05717        234 GFVTGQEFVVDGGMT  248 (255)
T ss_pred             cCccCcEEEECCCce
Confidence            899999999999965

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=285.45  Aligned_cols=240  Identities=26%  Similarity=0.393  Sum_probs=210.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.++..+++   +.++.++.+|++|.+++.++++.+.+.+ +++|
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-GRLD   82 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            39999999999999999999999999999999987776665554   5578889999999999999999999888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.++|++++++|+.+++++++++.|+|..  .+++|++||.++..+.++...|+++|++++++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~  160 (249)
T PRK06500         83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSL  160 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHH
Confidence            9999999877667777899999999999999999999999999854  47899999999988888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      +++++.|+.++||++++|+||.++|++...... ..........+....|.+++.+|+|+|+++.|++++.+.+++|+.+
T Consensus       161 ~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i  240 (249)
T PRK06500        161 AKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEI  240 (249)
T ss_pred             HHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeE
Confidence            999999999889999999999999998654321 1111223344556678889999999999999999988899999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      .+|||..
T Consensus       241 ~~~gg~~  247 (249)
T PRK06500        241 IVDGGMS  247 (249)
T ss_pred             EECCCcc
Confidence            9999965

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-37  Score=285.90  Aligned_cols=245  Identities=31%  Similarity=0.423  Sum_probs=212.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++||||+||||+++++.|+++|++|++++|+ .+++++..+++....  .....+.+|++|+++++++++++.+.+ ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            38999999999999999999999999999998 677777776665432  235568899999999999999999988 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|++.+.++||++||.++..+.++...|+++|++++
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999999998777788889999999999999999999999999998877899999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCCC--eEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          169 QLTKHLECEQAKDN--IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       169 ~l~~~la~e~~~~g--Irvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++.|+++++  |+|++|+||+++|++...........+....+....|.+++.+|+|+|+++++|+++.+.+++|
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  239 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTG  239 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999997664  9999999999999987543221111223344556678889999999999999999998999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||.+.
T Consensus       240 ~~i~~~~g~~~  250 (251)
T PRK07069        240 AELVIDGGICA  250 (251)
T ss_pred             CEEEECCCeec
Confidence            99999999764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=283.94  Aligned_cols=247  Identities=30%  Similarity=0.444  Sum_probs=216.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||+||||++++++|+++|++|++++|+.++.++..+.+.. +.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF-   79 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            3455 999999999999999999999999999999999888777777654 5578899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++|||||.... .++.+.+.+.+++.+++|+.+++.+++.++++|.+++.++||++||..+..+.++...|+.+|+
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKG  159 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHH
Confidence            899999999998543 4566778999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.+++.++.++++.||++++++||++.|++........ .......+....|.+++.+|+|+|+++++++++...+++
T Consensus       160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T PRK07231        160 AVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP-TPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWIT  238 (251)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999988999999999999999876543321 112334455667888999999999999999988888999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||..+
T Consensus       239 g~~~~~~gg~~~  250 (251)
T PRK07231        239 GVTLVVDGGRCV  250 (251)
T ss_pred             CCeEEECCCccC
Confidence            999999999654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=285.46  Aligned_cols=244  Identities=30%  Similarity=0.460  Sum_probs=214.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||.+++++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            3455 99999999999999999999999999999999988888887777666778899999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHH-HHcCCCCEEEEecCcccccCCCC----CccHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL-LKASGNGIIVFISSVAGVTAAPL----TPLYG  161 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~-m~~~~~g~IV~iSS~~~~~~~~~----~~~Y~  161 (367)
                      +++|++|||||.....+..+.+.+.|++++++|+.+++++++++.++ |.+++.++||++||..+..+.+.    ...|+
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~  167 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYN  167 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHH
Confidence            78999999999876666777789999999999999999999999998 77766789999999887766544    48899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++|++++.++++++.++.++||++|+++||+++|++......     ...+.+....|..++++++|+|+++.+++++.+
T Consensus       168 ~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  242 (259)
T PRK08213        168 TSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-----RLGEDLLAHTPLGRLGDDEDLKGAALLLASDAS  242 (259)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999997654321     133445567788899999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      .+++|+.+.+|||..+
T Consensus       243 ~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        243 KHITGQILAVDGGVSA  258 (259)
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.8e-37  Score=283.57  Aligned_cols=245  Identities=27%  Similarity=0.429  Sum_probs=218.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++.+++.+++...+.++.++.+|+++.++++++++.+.+.+ +++|
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~d   82 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-GPVD   82 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            389999999999999999999999999999999988888877776666789999999999999999999999888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.+.++..+++|+.+++++++++.+.|++.+.++||++||.++..+.++...|+++|+|++.+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~  162 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAF  162 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHH
Confidence            99999998766677777899999999999999999999999999887789999999999999989999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      +++++.++.+.|++++.++||+++|++......... .......+....|.+++.+++|+|+++.++++++..+++|+.+
T Consensus       163 ~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  242 (250)
T TIGR03206       163 SKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVL  242 (250)
T ss_pred             HHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEE
Confidence            999999998889999999999999998665432211 1123455566788899999999999999999999999999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      .+|||..
T Consensus       243 ~~~~g~~  249 (250)
T TIGR03206       243 SVSGGLT  249 (250)
T ss_pred             EeCCCcc
Confidence            9999964

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-37  Score=284.32  Aligned_cols=239  Identities=28%  Similarity=0.362  Sum_probs=208.1

Q ss_pred             CCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCC-----------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            9 NEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRN-----------QTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         9 ~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~-----------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      +++ ++|||||++  |||.+++++|+++|++|++++|+           ......+.+++...+.++.++.+|+++++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            444 999999994  99999999999999999999987           2222234455555566899999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      .++++++.+.+ +++|++|||||.....++.+.+.++++..+++|+.|++++++++.+.|.++..++||++||..+..+.
T Consensus        83 ~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         83 NRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            99999999998 89999999999877777778899999999999999999999999999987777899999999998888


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++...|++||+++++++++++.++.+.||+|++|+||+++|++....        ....+....|..++.+|+|+|+++.
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~  233 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE--------LKHHLVPKFPQGRVGEPVDAARLIA  233 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh--------HHHhhhccCCCCCCcCHHHHHHHHH
Confidence            88899999999999999999999998899999999999999865321        2223344567778899999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcc
Q 035642          235 FLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      |++++.+..++|+.+.+|||+.
T Consensus       234 ~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        234 FLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHhCcccccccCCEEEecCCcc
Confidence            9999988899999999999964

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-37  Score=292.56  Aligned_cols=243  Identities=26%  Similarity=0.341  Sum_probs=206.7

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +.+++++ ++|||||++|||+++|++|+++|++|++++++ .+..++..+++...+.++.++.+|++|++++.++++++.
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            3456666 99999999999999999999999999999875 456667777777667789999999999999999999998


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-------CCCEEEEecCcccccCCC
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-------GNGIIVFISSVAGVTAAP  155 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-------~~g~IV~iSS~~~~~~~~  155 (367)
                      + + |++|+||||||+.....+.+.+.++|++++++|+.|++++++++.++|+++       ..|+||++||.++..+.+
T Consensus        86 ~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (306)
T PRK07792         86 G-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV  163 (306)
T ss_pred             H-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence            8 8 899999999999877777888999999999999999999999999998743       137999999999998888


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      +...|++||+|+++++++++.|+.++||+||+|+||. .|++.........  +...  .    .....+|+|+|.++.|
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~--~~~~--~----~~~~~~pe~va~~v~~  234 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP--DVEA--G----GIDPLSPEHVVPLVQF  234 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc--hhhh--h----ccCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999994 7887543221110  0000  0    1123489999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcccc
Q 035642          236 LCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |+++.+.+++|+.+.+|||....
T Consensus       235 L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        235 LASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HcCccccCCCCCEEEEcCCeEEE
Confidence            99998889999999999998663

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.4e-37  Score=287.40  Aligned_cols=238  Identities=24%  Similarity=0.308  Sum_probs=200.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAG----FGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~----~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++||||++|||+++|++|++    +|++|++++|+.++++++.+++..  .+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999999999888888865  24578889999999999999999998876


Q ss_pred             CCC----ccEEEEcCCCCCCC--CccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccCCCC
Q 035642           86 QGK----LNLLVNNAAVAVPK--EALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        86 ~g~----iD~lI~~Ag~~~~~--~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~~~~  156 (367)
                       +.    .|+||||||.....  ...+ .+.+.|++++++|+.|++.+++.++|.|++++  .|+||++||.++..+.++
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence             44    36999999975432  2232 25789999999999999999999999997652  479999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ..+|++||+|+++|+++++.|++++||+||+|+||+++|++..........++....+....|.+++.+|+|+|++++++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998754322111112334455667899999999999999999


Q ss_pred             hCCCCCCccccEEEe
Q 035642          237 CFPAASYITGQVICV  251 (367)
Q Consensus       237 ~s~~~~~itG~~i~v  251 (367)
                      ++ .++++||+.+..
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 578999998753

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.6e-37  Score=280.06  Aligned_cols=240  Identities=28%  Similarity=0.407  Sum_probs=211.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +++||||+||||++++++|+++|+.|++.+|+.+++++..+.+   +.++.++.+|+++.++++++++++.+.+ +
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL-E   79 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            444 9999999999999999999999999999999988877665544   4568889999999999999999999988 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|++|||||.....++.+.+.++|++++++|+.+++++++++.+.+.+++.++||++||.++..+.++...|+++|+++
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~  159 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGM  159 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHH
Confidence            99999999998776667777889999999999999999999999988777779999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      .++++.++.++.+.|+++++|+||+++|++......  .   ..+......|.+++++|+|+++++.|++++...+++|+
T Consensus       160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~  234 (245)
T PRK12936        160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND--K---QKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQ  234 (245)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh--H---HHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCC
Confidence            999999999999889999999999999987654321  1   22233456788899999999999999998888899999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      .+.+|||...
T Consensus       235 ~~~~~~g~~~  244 (245)
T PRK12936        235 TIHVNGGMAM  244 (245)
T ss_pred             EEEECCCccc
Confidence            9999999753

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-37  Score=287.75  Aligned_cols=236  Identities=23%  Similarity=0.256  Sum_probs=204.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-------~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +++ +++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++.+|+++++++.+++++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            444 99999999999999999999999999999998643       4455566666677899999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--CCCc
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--PLTP  158 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--~~~~  158 (367)
                      +.+.+ +++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.  ++..
T Consensus        84 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  162 (273)
T PRK08278         84 AVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHT  162 (273)
T ss_pred             HHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcc
Confidence            99988 89999999999877777888899999999999999999999999999988878999999998887776  7889


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +|++||+++++++++++.|++++||+||+|+|| +++|++......            ...+.+++.+|+++|+++++++
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~------------~~~~~~~~~~p~~va~~~~~l~  230 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG------------GDEAMRRSRTPEIMADAAYEIL  230 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc------------ccccccccCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999 688886543221            1124557789999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++..++++|+.+ +|++....
T Consensus       231 ~~~~~~~~G~~~-~~~~~~~~  250 (273)
T PRK08278        231 SRPAREFTGNFL-IDEEVLRE  250 (273)
T ss_pred             cCccccceeEEE-eccchhhc
Confidence            988889999877 67776543

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=279.90  Aligned_cols=240  Identities=27%  Similarity=0.381  Sum_probs=211.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .++ +++||||+||||++++++|+++|++|+++.|+. +..++..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF-   81 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            444 999999999999999999999999998887754 44566666666667789999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.++++++++|..  .++||++||.++..+.+++..|+++|++
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  159 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAA  159 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHH
Confidence            89999999999877667778889999999999999999999999999854  4899999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.++++++.++++.|+++++|+||++.|++......    .+....+....|.++..+|+|+|+.+.|++++.+.+++|
T Consensus       160 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g  235 (245)
T PRK12937        160 VEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS----AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNG  235 (245)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccc
Confidence            9999999999999999999999999999998543211    124455667789999999999999999999988899999


Q ss_pred             cEEEeCCCc
Q 035642          247 QVICVDGGM  255 (367)
Q Consensus       247 ~~i~vdgG~  255 (367)
                      +.+.+|||.
T Consensus       236 ~~~~~~~g~  244 (245)
T PRK12937        236 QVLRVNGGF  244 (245)
T ss_pred             cEEEeCCCC
Confidence            999999986

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-37  Score=287.13  Aligned_cols=244  Identities=34%  Similarity=0.461  Sum_probs=212.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||++|||.+++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4555 9999999999999999999999999999999864 3455555565556678899999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||.... .++.+.+.++|++.+++|+.++++++++++++|++  .++||++||.++..+.++...|++||
T Consensus       123 -~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK  199 (290)
T PRK06701        123 -GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATK  199 (290)
T ss_pred             -CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHH
Confidence             899999999998643 46777899999999999999999999999999854  47999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|++.++++++.++.++||+|++|+||+++|++......    .+....+....|.+++.+|+|+|++++||+++.+.++
T Consensus       200 ~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~  275 (290)
T PRK06701        200 GAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD----EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYI  275 (290)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC----HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCc
Confidence            999999999999999999999999999999997654321    1233444566788999999999999999999989999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      +|+.+.+|||....
T Consensus       276 ~G~~i~idgg~~~~  289 (290)
T PRK06701        276 TGQMLHVNGGVIVN  289 (290)
T ss_pred             cCcEEEeCCCcccC
Confidence            99999999997653

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=291.79  Aligned_cols=238  Identities=21%  Similarity=0.229  Sum_probs=206.0

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |+..++++ ++|||||++|||++++++|+++|++|++++|+.++++++.+++.. +.++..+.+|++|+++++++++++.
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34455666 999999999999999999999999999999999988888777743 4567777899999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +.+ +++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|.++ .|+||++||.++..+.++...|++
T Consensus        81 ~~~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         81 ERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             HHc-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHH
Confidence            998 899999999999877788889999999999999999999999999999765 589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc--CCCCCCCCHHHHHHHHHHHhCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR--TPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ||+++++|+++++.|++++||+||+|+||+++|++.........   ....+...  .|.++..+|+|+|+++++++++.
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLP---AFRELRARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccch---hHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999998765432211   22222232  36788999999999999999877


Q ss_pred             CCCcccc
Q 035642          241 ASYITGQ  247 (367)
Q Consensus       241 ~~~itG~  247 (367)
                      ..+++|.
T Consensus       236 ~~~i~~~  242 (296)
T PRK05872        236 ARRVYAP  242 (296)
T ss_pred             CCEEEch
Confidence            7666554

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-37  Score=280.42  Aligned_cols=249  Identities=28%  Similarity=0.390  Sum_probs=216.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ +++||||+||||++++++|+++|++|++++|+.+..++..+++. .+.++.++.+|++|+++++++++++.+++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34555 99999999999999999999999999999999888777777665 45678899999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||......+.+.+.+++++++++|+.+++++++.+++.|++.+.++|+++||..+..+.++...|+++|+
T Consensus        80 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         80 -GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence             8999999999987777777789999999999999999999999999998887899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhh-HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN-KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++.++++++.++.+.|+++++++||++.|++........... ..........|.+++.+++|+|++++++++....++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  238 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA  238 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            9999999999999988999999999999999865432211111 122223334567778999999999999998888899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||++.
T Consensus       239 ~g~~~~~~~g~~~  251 (252)
T PRK06138        239 TGTTLVVDGGWLA  251 (252)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=7.4e-37  Score=279.71  Aligned_cols=241  Identities=28%  Similarity=0.418  Sum_probs=211.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||+||||+++|++|+++|++|++++|+.. ..++........+.++.++.+|+++.+++.++++++.+++ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            58999999999999999999999999999999854 2333333333335578899999999999999999999988 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||.....++.+.+.++|+.++++|+.+++++++++++.|++.+.++||++||..+..+.++...|++||+|+++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999999887777778899999999999999999999999999988778999999999999888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++.+.|+++++++||++.|++......     .....+....|.+++.+++|+++++.+|+++.+.+++|+.+
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGP-----EVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETI  236 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH-----HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence            9999999998889999999999999998654321     23444556678888999999999999999888889999999


Q ss_pred             EeCCCccc
Q 035642          250 CVDGGMTV  257 (367)
Q Consensus       250 ~vdgG~~~  257 (367)
                      .+|||..+
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12824        237 SINGGLYM  244 (245)
T ss_pred             EECCCeec
Confidence            99999865

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=283.30  Aligned_cols=246  Identities=23%  Similarity=0.340  Sum_probs=198.0

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC----hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN----QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~----~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .+++++ +++||||++|||+++|++|+++|++|++++++    .+..++..+++...+.++.++++|+++++++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            334554 99999999999999999999999997766543    3445555566655566788999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEe-cCcccccCCCCCcc
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFI-SSVAGVTAAPLTPL  159 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~i-SS~~~~~~~~~~~~  159 (367)
                      +.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|++  .|+|+++ ||..+ ...+.+..
T Consensus        83 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~-~~~~~~~~  158 (257)
T PRK12744         83 AKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLG-AFTPFYSA  158 (257)
T ss_pred             HHHhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhc-ccCCCccc
Confidence            99888 89999999999877777778899999999999999999999999999864  3677776 45434 34567889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC--CCCCHHHHHHHHHHHh
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC--RPGEPDEVSSLVAFLC  237 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~ai~~L~  237 (367)
                      |++||+|+++|+++++.|+.++||+||+++||++.|++......... ...........|..  ++.+|+|+|+++.||+
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (257)
T PRK12744        159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA-VAYHKTAAALSPFSKTGLTDIEDIVPFIRFLV  237 (257)
T ss_pred             chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch-hhcccccccccccccCCCCCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999997644221111 00111112223443  7889999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++ +.+++|+.+.+|||+..
T Consensus       238 ~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        238 TD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             cc-cceeecceEeecCCccC
Confidence            85 67899999999999754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=281.01  Aligned_cols=248  Identities=25%  Similarity=0.365  Sum_probs=214.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|++++.++..+.+...+.++.++.+|++|.++++++++++.+.+ +
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   83 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-G   83 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            444 99999999999999999999999999999999988888888887767788899999999999999999998888 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHH-HcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL-KASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m-~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.....+..+.+.+.+++.+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|++
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a  163 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHG  163 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence            99999999998776677777889999999999999999999999999 76778999999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHHHHH-HhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEG-LVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~~~~-~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++++++.++.++.+.||++|+|+||++.|++........      ...+.... +....+.+++.+++|++++++++++.
T Consensus       164 ~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  243 (262)
T PRK13394        164 LLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSF  243 (262)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCc
Confidence            999999999999888999999999999999754322110      00111222 23345678899999999999999987


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      .+..++|+.+.+|||+.+
T Consensus       244 ~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        244 PSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             cccCCcCCEEeeCCceec
Confidence            778899999999999653

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=277.32  Aligned_cols=228  Identities=29%  Similarity=0.400  Sum_probs=193.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|+++++ +.+..+++.+++     ...++.+|++|.+++.+++++    + +++
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~-~~i   76 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S-GAL   76 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h-CCC
Confidence            39999999999999999999999999988766 455555444433     245678999999998887754    4 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~asKaal~  168 (367)
                      |++|||||.....+..+.+.++|++++++|+.+++++++.+.++|.+  .|+||++||..+. .+.++...|+++|++++
T Consensus        77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~  154 (237)
T PRK12742         77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSALQ  154 (237)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHHH
Confidence            99999999876666677889999999999999999999999999854  4899999998874 56778899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++++++.+++++||+||+|+||+++|++.....   .   ..+......|.+|+.+|+|+|+++.||+++.+.+++|+.
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~---~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~  228 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPIDTDANPANG---P---MKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---H---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCE
Confidence            9999999999999999999999999999864321   1   223334557889999999999999999999999999999


Q ss_pred             EEeCCCcc
Q 035642          249 ICVDGGMT  256 (367)
Q Consensus       249 i~vdgG~~  256 (367)
                      +.+|||+.
T Consensus       229 ~~~dgg~~  236 (237)
T PRK12742        229 HTIDGAFG  236 (237)
T ss_pred             EEeCCCcC
Confidence            99999964

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=278.53  Aligned_cols=240  Identities=30%  Similarity=0.416  Sum_probs=206.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||++|||+++++.|+++|++|+++ .|+.++++...+++...+.++.++.||++++++++++++++.+.+ +++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            589999999999999999999999998876 467777777777776666789999999999999999999998888 899


Q ss_pred             cEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCC-CccHHHHH
Q 035642           90 NLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPL-TPLYGPYN  164 (367)
Q Consensus        90 D~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~-~~~Y~asK  164 (367)
                      |++|||||.... .++.+.+.++++.++++|+.+++.+++.+++.|..++   .++||++||.++..+.+. +..|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999998654 4566778999999999999999999999999886543   578999999988877664 56899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++++++++++.++.+.||+|++|+||+++|++..... .+.   .........|.++..+|+|+|+.+++++++.+.++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPG---RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHH---HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999988999999999999999864321 111   22333455678888999999999999999988999


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      +|+.+.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999984

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=276.57  Aligned_cols=241  Identities=28%  Similarity=0.364  Sum_probs=207.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++|||||+||||.+++++|+++|++|+++. |+++..++..+.+...+.++.++.+|++|.+++.++++++.+.+ ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence            45899999999999999999999999988876 45566666666666556678899999999999999999999998 89


Q ss_pred             ccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCC-CccHHHH
Q 035642           89 LNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPL-TPLYGPY  163 (367)
Q Consensus        89 iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~-~~~Y~as  163 (367)
                      +|++|||||.... .++.+.+.++|++++++|+.++++++++++++|.++.   .|+||++||.++..+.++ +..|++|
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999998654 4566778999999999999999999999999987542   478999999998888776 4679999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |++++++++.++.++.++||++++|+||++.|++..... .   +..........|+++.++|+|+|+++++++++...+
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~---~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~  236 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-E---PGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASY  236 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-C---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999754321 1   123444556678999999999999999999988889


Q ss_pred             ccccEEEeCCCc
Q 035642          244 ITGQVICVDGGM  255 (367)
Q Consensus       244 itG~~i~vdgG~  255 (367)
                      ++|+.+.+|||.
T Consensus       237 ~~g~~~~~~gg~  248 (248)
T PRK06123        237 TTGTFIDVSGGR  248 (248)
T ss_pred             ccCCEEeecCCC
Confidence            999999999973

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.8e-36  Score=275.44  Aligned_cols=240  Identities=31%  Similarity=0.437  Sum_probs=213.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|++++| +.+..++..+++...+.++.++.+|++|+++++++++.+.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            37999999999999999999999999999888 6666666666655556678999999999999999999999888 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||......+.+.+.++++..+++|+.+++.+++.+++.|++.+.++||++||..+..+.++...|+++|++++.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            99999999887767778899999999999999999999999999988878999999999999888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++.+.|+++++++||++.|++......     .....+....|..++.+|+|+|+++.||++++..+++|+.+
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~  234 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-----DVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATL  234 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            9999999999889999999999999998654321     13344555678889999999999999999988889999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      .+|||..
T Consensus       235 ~~~gg~~  241 (242)
T TIGR01829       235 SINGGLY  241 (242)
T ss_pred             EecCCcc
Confidence            9999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.9e-36  Score=279.17  Aligned_cols=236  Identities=27%  Similarity=0.347  Sum_probs=202.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++||||++|||+++|+.|+++|++|++++|+.+++++..+++...  +..+.++.+|++|++++.++++++.+.+ ++
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~   83 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY-GK   83 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            49999999999999999999999999999999998888887777532  3346677999999999999999999988 89


Q ss_pred             ccEEEEcCCCCC---CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC----------
Q 035642           89 LNLLVNNAAVAV---PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP----------  155 (367)
Q Consensus        89 iD~lI~~Ag~~~---~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~----------  155 (367)
                      +|++|||||...   ..++.+.+.+.++..+++|+.+++.++++++|+|++++.++||++||..+..+..          
T Consensus        84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  163 (256)
T PRK09186         84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT  163 (256)
T ss_pred             ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC
Confidence            999999998643   2456778999999999999999999999999999888789999999987754321          


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ....|++||+++++++++++.|+.++||+||+|+||++.++...      .   .........+.+++.+|+|+|+++++
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~------~---~~~~~~~~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE------A---FLNAYKKCCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH------H---HHHHHHhcCCccCCCCHHHhhhhHhh
Confidence            22469999999999999999999999999999999999876421      1   22333344567788999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcc
Q 035642          236 LCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ++++.+.+++|+.+.+|||+.
T Consensus       235 l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eeccccccccCceEEecCCcc
Confidence            999888999999999999964

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=290.77  Aligned_cols=222  Identities=23%  Similarity=0.285  Sum_probs=196.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++||||||+|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   82 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG-   82 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-
Confidence            3444 99999999999999999999999999999999999999888888777788899999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.+....|++||+|
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaa  162 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFG  162 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHH
Confidence            89999999999988888889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCC-CeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          167 MNQLTKHLECEQAKD-NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       167 l~~l~~~la~e~~~~-gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +.+|+++++.|+.+. ||+|++|+||+++|++.........        ....+...+.+|+++|+++++++.
T Consensus       163 l~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~--------~~~~~~~~~~~pe~vA~~il~~~~  227 (330)
T PRK06139        163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG--------RRLTPPPPVYDPRRVAKAVVRLAD  227 (330)
T ss_pred             HHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc--------ccccCCCCCCCHHHHHHHHHHHHh
Confidence            999999999999875 8999999999999998653211100        011223346799999999999884

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-36  Score=280.33  Aligned_cols=245  Identities=29%  Similarity=0.394  Sum_probs=213.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.++.+...+++...  +.++.++.+|++|++++.++++++.+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            444 9999999999999999999999999999999988877777666543  3578889999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||.... .++.+.+.++|+.++++|+.+++.+++++.++|.+.+.++|+++||..+..+.++..+|+++|
T Consensus        85 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         85 -GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             -CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence             899999999997533 456677889999999999999999999999999877778999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.+++.++.++.+.||++++|+||+++|++.........   .........|.+++++|+|+|+++.||++....++
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  240 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPE---LSADYRACTPLPRVGEVEDVANLAMFLLSDAASWI  240 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHH---HHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999998754322211   22334456788899999999999999999888889


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||...
T Consensus       241 ~g~~~~~~~g~~~  253 (276)
T PRK05875        241 TGQVINVDGGHML  253 (276)
T ss_pred             CCCEEEECCCeec
Confidence            9999999999775

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=277.35  Aligned_cols=230  Identities=29%  Similarity=0.369  Sum_probs=196.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +++||||++|||++++++|+++|++|++++|+....         ...++.++.+|++++  +++    +.+.+ +
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~--~~~----~~~~~-~   66 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD--LEP----LFDWV-P   66 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH--HHH----HHHhh-C
Confidence            444 999999999999999999999999999999985431         134678899999987  333    33445 7


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.... .++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||.++..+.++...|+++|++
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            89999999997642 45677789999999999999999999999999988778999999999999888899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.++.++||++|+|+||+++|++........   .....+....|.+++.+|+|+|++++||+++.+.+++|
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g  223 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPG---GLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQG  223 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCch---HHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCC
Confidence            999999999999999999999999999999764322211   13334456678999999999999999999998899999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||+.+
T Consensus       224 ~~~~~~gg~~~  234 (235)
T PRK06550        224 TIVPIDGGWTL  234 (235)
T ss_pred             cEEEECCceec
Confidence            99999999753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-37  Score=277.21  Aligned_cols=217  Identities=28%  Similarity=0.317  Sum_probs=197.2

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .-+.+| +||||||++|||+++|.+|+++|+++++.|.+.+..++..+++++.| ++..+.||+++.+++.+..++++++
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            345667 99999999999999999999999999999999999999999998765 8999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      . |.+|++|||||+....++.+.+++.+++++++|+.|+++.+++++|.|.+++.|+||+++|.+|..+.++..+|++||
T Consensus       112 ~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  112 V-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             c-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence            9 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC---CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          165 GAMNQLTKHLECEQA---KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       165 aal~~l~~~la~e~~---~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +|+.+|.+++..|+.   .+||+...++|++++|.|.....+.             ..+....+|+.+|+.++..+
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~-------------~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF-------------PTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC-------------ccccCCCCHHHHHHHHHHHH
Confidence            999999999999985   4579999999999999998751111             11223458999999998876

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.9e-36  Score=281.63  Aligned_cols=239  Identities=24%  Similarity=0.298  Sum_probs=196.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHH----HHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLK-GLKVTGSVCDLSSREQR----EKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv----~~~~~~~~~~~   85 (367)
                      +++||||++|||++++++|+++|++|++++| +.++++.+.+++... +.++.++.+|++|++++    +++++++.+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999999998765 466777777776532 45677889999999865    56666666777


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCH-----------HHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTA-----------EYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~-----------e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~  148 (367)
                       +++|+||||||.....++.+.+.           +.|.+++++|+.+++.+++++.++|+..      ..++||++||.
T Consensus        83 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        83 -GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             -CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             88999999999865554443333           3589999999999999999999998643      24789999999


Q ss_pred             ccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC-CCCCHH
Q 035642          149 AGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPD  227 (367)
Q Consensus       149 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~  227 (367)
                      .+..+.+++.+|++||+|+++++++++.|++++||+||+|+||++.|+....    ..   ..+.+....|.+ +..+|+
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~  234 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FE---VQEDYRRKVPLGQREASAE  234 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hh---HHHHHHHhCCCCcCCCCHH
Confidence            9988888999999999999999999999999999999999999998763211    11   222333445665 788999


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |+|++++|++++.+.+++|+.+.+|||+...
T Consensus       235 ~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            9999999999998999999999999998654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-36  Score=276.90  Aligned_cols=246  Identities=27%  Similarity=0.349  Sum_probs=215.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||||+||++++++|+++|++|++++|+.++.++..+++...+.++.++.||++++++++++++.+.+.+ +++|
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   83 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-GGVD   83 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            499999999999999999999999999999999998888888877667789999999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||........+.+.+.++.++++|+.+++++++.+++.|++++.++||++||..+..+.++...|+++|++++.+
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~  163 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGL  163 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHH
Confidence            99999998877777788999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCC-------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++.++.++.+.||++++++||++.|++.......       .........+....+.+++.+++|+|+++++++++....
T Consensus       164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  243 (258)
T PRK12429        164 TKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKG  243 (258)
T ss_pred             HHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccC
Confidence            9999999998899999999999999876432111       000111122334456678999999999999999877788


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||++.
T Consensus       244 ~~g~~~~~~~g~~~  257 (258)
T PRK12429        244 VTGQAWVVDGGWTA  257 (258)
T ss_pred             ccCCeEEeCCCEec
Confidence            89999999999764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.8e-36  Score=306.01  Aligned_cols=243  Identities=33%  Similarity=0.502  Sum_probs=212.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-GRID   81 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence            39999999999999999999999999999999998887766665   4567889999999999999999999999 8999


Q ss_pred             EEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC-EEEEecCcccccCCCCCccHHHHHHHH
Q 035642           91 LLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        91 ~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g-~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||.++..+.++..+|+++|+|+
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal  161 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV  161 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence            9999999843  2456778999999999999999999999999999776555 999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++|+++++.|+.++||+||+|+||+++|++.........  ..........|.+++.+|+|+|+++.||+++.+.+++|+
T Consensus       162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~  239 (520)
T PRK06484        162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK--LDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS  239 (520)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch--hhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999999999999999999998764422211  012233455688889999999999999999989999999


Q ss_pred             EEEeCCCccccC
Q 035642          248 VICVDGGMTVNG  259 (367)
Q Consensus       248 ~i~vdgG~~~~~  259 (367)
                      .+.+|||+...+
T Consensus       240 ~~~~~gg~~~~~  251 (520)
T PRK06484        240 TLVVDGGWTVYG  251 (520)
T ss_pred             eEEecCCeeccc
Confidence            999999986553

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.6e-36  Score=274.25  Aligned_cols=239  Identities=30%  Similarity=0.453  Sum_probs=208.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||+||||.+++++|+++|++|+++.+ +.+..++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   85 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF-GKV   85 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            49999999999999999999999999987654 5566666767776666789999999999999999999999998 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||......+.+.+.+.+++++++|+.++++++++++|+|.+.+.++||++||..+..+.+++..|++||+++++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  165 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLG  165 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            99999999987766777888999999999999999999999999987777899999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++.+.||+++.++||+++|++......  .   .........+.+++.+|+|+++++++++++ ..+++|+.+
T Consensus       166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~  239 (247)
T PRK12935        166 FTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE--E---VRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQL  239 (247)
T ss_pred             HHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH--H---HHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEE
Confidence            9999999998889999999999999987653321  1   223344556777899999999999999965 457899999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      ++|||..
T Consensus       240 ~i~~g~~  246 (247)
T PRK12935        240 NINGGLY  246 (247)
T ss_pred             EeCCCcc
Confidence            9999963

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-36  Score=273.65  Aligned_cols=240  Identities=29%  Similarity=0.416  Sum_probs=208.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   85 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-GGID   85 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            399999999999999999999999999999999887777777776555577889999999999999999999988 7899


Q ss_pred             EEEEcCCCCC---CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           91 LLVNNAAVAV---PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        91 ~lI~~Ag~~~---~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +||||||...   ..++.+.+.+.+++++++|+.++++++++++++|.+.+.|+||++||.+++.   +...|++||+++
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~  162 (250)
T PRK07774         86 YLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGL  162 (250)
T ss_pred             EEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHH
Confidence            9999999864   3456677889999999999999999999999999887789999999987754   457899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      +.++++++.++...||++++++||.++|++.......    .......+..|..++.+|+|+|+++++++++.....+|+
T Consensus       163 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~  238 (250)
T PRK07774        163 NGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPK----EFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQ  238 (250)
T ss_pred             HHHHHHHHHHhCccCeEEEEEecCcccCccccccCCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCC
Confidence            9999999999998899999999999999986543221    234455666778888999999999999998766678999


Q ss_pred             EEEeCCCcccc
Q 035642          248 VICVDGGMTVN  258 (367)
Q Consensus       248 ~i~vdgG~~~~  258 (367)
                      .+.++||.++.
T Consensus       239 ~~~v~~g~~~~  249 (250)
T PRK07774        239 IFNVDGGQIIR  249 (250)
T ss_pred             EEEECCCeecc
Confidence            99999997763

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-36  Score=279.16  Aligned_cols=226  Identities=17%  Similarity=0.243  Sum_probs=194.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||||++|||+++|++|+ +|++|++++|+.++++++.++++..+. .+.++.||++|+++++++++++.+.+ |++|
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   79 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS   79 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence            68999999999999999999 599999999999999998888876554 47889999999999999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....+..+.+.+.+.+++++|+.+++.+++.++|+|.+++ .|+||++||.++..+.++...|++||+|+++
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            999999987655555667788889999999999999999999997664 6899999999999998999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      |+++++.|++++||+||+|+||++.|++......                .....+|+|+|+.++++++....   ++.+
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~----------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~  220 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP----------------APMSVYPRDVAAAVVSAITSSKR---STTL  220 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchhhcCCCC----------------CCCCCCHHHHHHHHHHHHhcCCC---CceE
Confidence            9999999999999999999999999997543211                11135899999999999965332   5567


Q ss_pred             EeCCCcccc
Q 035642          250 CVDGGMTVN  258 (367)
Q Consensus       250 ~vdgG~~~~  258 (367)
                      .++++....
T Consensus       221 ~~~~~~~~~  229 (246)
T PRK05599        221 WIPGRLRVL  229 (246)
T ss_pred             EeCccHHHH
Confidence            888776443

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=274.30  Aligned_cols=214  Identities=23%  Similarity=0.272  Sum_probs=181.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++     ++.++.+|++++++++++++++.    +++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence            4899999999999999999999999999999988877665554     35578899999999999988764    36899


Q ss_pred             EEEcCCCCCC------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           92 LVNNAAVAVP------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        92 lI~~Ag~~~~------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +|||||....      .++.+ +.++|++++++|+.++++++++++|+|++  .|+||++||.+    .+...+|++||+
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa  145 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA  145 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence            9999985321      12333 57899999999999999999999999964  48999999976    345689999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+.+|+++++.|++++||+||+|+||+++|++....              ...|.   .+|+|+|+++.||+++++.+++
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~--------------~~~p~---~~~~~ia~~~~~l~s~~~~~v~  208 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL--------------SRTPP---PVAAEIARLALFLTTPAARHIT  208 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc--------------cCCCC---CCHHHHHHHHHHHcCchhhccC
Confidence            999999999999999999999999999999864211              11232   3899999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||+..+
T Consensus       209 G~~i~vdgg~~~~  221 (223)
T PRK05884        209 GQTLHVSHGALAH  221 (223)
T ss_pred             CcEEEeCCCeecc
Confidence            9999999998754

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-36  Score=273.59  Aligned_cols=220  Identities=18%  Similarity=0.219  Sum_probs=189.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+|++++++++++++++.+++ 
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF-   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4555 99999999999999999999999999999999999988888887667778889999999999999999999998 


Q ss_pred             C-CccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHH
Q 035642           87 G-KLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        87 g-~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      + ++|++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .|+||++||..+.   +++..|++|
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as  157 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS  157 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence            7 8999999998643 45777889999999999999999999999999998654 6899999997654   567889999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+|+++++.|++++||+||+|+||++.|+....    ..   ..+.+.           +|++.+..||++  +++
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~----~~---~~~~~~-----------~~~~~~~~~l~~--~~~  217 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD----AV---HWAEIQ-----------DELIRNTEYIVA--NEY  217 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC----HH---HHHHHH-----------HHHHhheeEEEe--ccc
Confidence            9999999999999999999999999999999983211    11   111111           799999999995  789


Q ss_pred             ccccEEEe
Q 035642          244 ITGQVICV  251 (367)
Q Consensus       244 itG~~i~v  251 (367)
                      +||+.+.-
T Consensus       218 ~tg~~~~~  225 (227)
T PRK08862        218 FSGRVVEA  225 (227)
T ss_pred             ccceEEee
Confidence            99988753

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-36  Score=276.37  Aligned_cols=240  Identities=26%  Similarity=0.385  Sum_probs=205.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +++||||+||||.+++++|+++|++|++++|+..+.++..+++.     ..++.+|++++++++++++++.+.+ +
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-G   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            344 99999999999999999999999999999999877766655542     2578899999999999999998888 8


Q ss_pred             CccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-CCCccHHHHH
Q 035642           88 KLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-PLTPLYGPYN  164 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~~~~~Y~asK  164 (367)
                      ++|++|||||...+  .++.+.+.+.|++.+++|+.|++++++.++|+|++++.|+||++||..+..+. ++...|++||
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence            99999999998643  35567788999999999999999999999999987778999999998877765 4678899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++++++.++.++.++||++++|+||+++|++........  .+.........|.+++.+|+|+|+++.+|+++.+.++
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  236 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD--PERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFI  236 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999988999999999999999865432211  1122233345678899999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      +|+.+.+|||..
T Consensus       237 ~g~~~~~~~g~~  248 (255)
T PRK06057        237 TASTFLVDGGIS  248 (255)
T ss_pred             cCcEEEECCCee
Confidence            999999999965

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=290.45  Aligned_cols=224  Identities=21%  Similarity=0.289  Sum_probs=198.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .+++ +++|||||+|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-   83 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-   83 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-
Confidence            3455 99999999999999999999999999999999999988888887777889999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....++.+.+.+++++++++|+.|++++++.++++|++++.|+||++||..+..+.+....|++||++
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a  163 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHA  163 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHH
Confidence            89999999999877777888899999999999999999999999999988878999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC--CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          167 MNQLTKHLECEQAK--DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       167 l~~l~~~la~e~~~--~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++|+++++.|+..  .+|++++|+||+++||+.......      ..  ....|..++.+|+|+|++++++++..
T Consensus       164 ~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~------~~--~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        164 IRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR------LP--VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh------cc--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999874  479999999999999976432110      00  11234567789999999999999643

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=272.13  Aligned_cols=239  Identities=27%  Similarity=0.324  Sum_probs=204.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+++|||||++|||++++++|+++|++|+++++ +.+.++.+.+++...+.++.++.+|++|.+++.++++++.+.+ ++
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~   87 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL-GP   87 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            349999999999999999999999999988766 4556666777766556778899999999999999999999888 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||.....++.+.+.+.|++++++|+.|++++++++.++|.+...++||+++|..+..+.+.+..|++||++++
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~  167 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALW  167 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHH
Confidence            99999999987777777889999999999999999999999999998777799999999888777788889999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++++++.++.+. |+||+|+||++.|+....    ..   .........+.++..+++|+|++++++++  ..+++|+.
T Consensus       168 ~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~----~~---~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~g~~  237 (258)
T PRK09134        168 TATRTLAQALAPR-IRVNAIGPGPTLPSGRQS----PE---DFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVTGQM  237 (258)
T ss_pred             HHHHHHHHHhcCC-cEEEEeecccccCCcccC----hH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCCCE
Confidence            9999999999775 999999999998864211    11   12233445677888999999999999995  56789999


Q ss_pred             EEeCCCccccC
Q 035642          249 ICVDGGMTVNG  259 (367)
Q Consensus       249 i~vdgG~~~~~  259 (367)
                      +.+|||.....
T Consensus       238 ~~i~gg~~~~~  248 (258)
T PRK09134        238 IAVDGGQHLAW  248 (258)
T ss_pred             EEECCCeeccc
Confidence            99999986543

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-35  Score=273.50  Aligned_cols=245  Identities=29%  Similarity=0.414  Sum_probs=213.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||++|||++++++|+++|++ |++++|+.++.....+++...+.++.++.+|+++++++.++++.+.+.+ +++
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   85 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-GRL   85 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence            39999999999999999999999998 9999999888777777776666778889999999999999999999888 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |++|||||.....++.+.+.+.|+.++++|+.++++++++++++|.+++ .|+||++||.++..+.++...|+++|++++
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  165 (260)
T PRK06198         86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA  165 (260)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHH
Confidence            9999999987777777889999999999999999999999999997653 589999999999888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC--hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD--PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++.|+...||++++|+||++.|++.......  .....+........|.+++.+++|+|+++.+++++.+.+++|
T Consensus       166 ~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G  245 (260)
T PRK06198        166 TLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTG  245 (260)
T ss_pred             HHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccC
Confidence            999999999999999999999999999975321111  011123344445677888999999999999999988889999


Q ss_pred             cEEEeCCCcc
Q 035642          247 QVICVDGGMT  256 (367)
Q Consensus       247 ~~i~vdgG~~  256 (367)
                      +.+.+|||..
T Consensus       246 ~~~~~~~~~~  255 (260)
T PRK06198        246 SVIDFDQSVW  255 (260)
T ss_pred             ceEeECCccc
Confidence            9999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-35  Score=270.79  Aligned_cols=240  Identities=30%  Similarity=0.451  Sum_probs=207.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||+||||+++++.|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++.+.+.+ 
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            3555 99999999999999999999999999999999988888888777667788899999999999999999998887 


Q ss_pred             CCccEEEEcCCCCCCCC--------c-cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCC
Q 035642           87 GKLNLLVNNAAVAVPKE--------A-LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~--------~-~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~  156 (367)
                      +++|++|||||......        + .+.+.+.++.++++|+.+++.+++.+.+.|.+. ..++||++||.. ..+.++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence            78999999999754322        1 566889999999999999999999999998765 457899999864 457778


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ...|++||+|+++++++++.++.++||++++++||++.|++.....     +...+.+....|.+++++++|+|+++.++
T Consensus       160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  234 (253)
T PRK08217        160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-----PEALERLEKMIPVGRLGEPEEIAHTVRFI  234 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-----HHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence            8999999999999999999999888999999999999999875432     12344455667888899999999999999


Q ss_pred             hCCCCCCccccEEEeCCCcc
Q 035642          237 CFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~  256 (367)
                      ++  +.+++|+.+.+|||+.
T Consensus       235 ~~--~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        235 IE--NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             Hc--CCCcCCcEEEeCCCcc
Confidence            94  5688999999999985

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=272.14  Aligned_cols=242  Identities=28%  Similarity=0.428  Sum_probs=207.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++++||||+||||.+++++|+++|++|++++|+. +..++..+.++..+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            45899999999999999999999999999999864 44555556665556678999999999999999999999998 88


Q ss_pred             ccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC------CCEEEEecCcccccCCCCCccH
Q 035642           89 LNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        89 iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~------~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +|++|||||....  .++.+.+.+.|++.+++|+.+++++++++.+.|.++.      .++||++||..+..+.++...|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  160 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY  160 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence            9999999998543  4566778899999999999999999999999997654      4679999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++||+++++++++++.++.++|+++++|+||++.|++.......     ....+. ...|.+++++|+|+|+++.+++++
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~  235 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK-----YDALIAKGLVPMPRWGEPEDVARAVAALASG  235 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh-----HHhhhhhcCCCcCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999999988899999999999999876543211     111111 246788899999999999999988


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      ...+++|+.+.+|||...
T Consensus       236 ~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        236 DLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             cccccCCCEEEECCCeec
Confidence            888899999999999765

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=269.46  Aligned_cols=238  Identities=28%  Similarity=0.356  Sum_probs=204.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ +++||||+||||+++++.|+++|++|++++|+.+++++..+..     ...++.+|+++.+++.++++.    +
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence            34555 9999999999999999999999999999999987776555443     245778999999998888775    3


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|++|||||.....+..+.+.+++++.+++|+.+++++++++.+.+++++ .++||++||..+..+.++...|++||
T Consensus        76 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK  154 (245)
T PRK07060         76 -GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASK  154 (245)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHH
Confidence             7899999999987766677788999999999999999999999999987654 48999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.++.+.||++++++||++.|++.........   ....+....|.+++.+++|+|+++++++++.+..+
T Consensus       155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  231 (245)
T PRK07060        155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ---KSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMV  231 (245)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCc
Confidence            999999999999998889999999999999998643222221   23344456788899999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       232 ~G~~~~~~~g~~~  244 (245)
T PRK07060        232 SGVSLPVDGGYTA  244 (245)
T ss_pred             cCcEEeECCCccC
Confidence            9999999999754

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=8.2e-36  Score=283.25  Aligned_cols=238  Identities=21%  Similarity=0.158  Sum_probs=196.7

Q ss_pred             EEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           14 FITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        14 LVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      |||||++|||++++++|+++| ++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+ +++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            699999999999999999999 999999999988888777775445578889999999999999999998877 899999


Q ss_pred             EEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccC----------------
Q 035642           93 VNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTA----------------  153 (367)
Q Consensus        93 I~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~----------------  153 (367)
                      |||||+... .+..+.+.++|++++++|+.|++.+++.++|.|++++  .|+||++||.++..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999998643 3456778999999999999999999999999998775  689999999876421                


Q ss_pred             -------------------CCCCccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcc-cCCccccccCChhhhHHHH
Q 035642          154 -------------------APLTPLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVI-RTSLSDAIRHDPAKNKIVE  212 (367)
Q Consensus       154 -------------------~~~~~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v-~t~~~~~~~~~~~~~~~~~  212 (367)
                                         ..++.+|++||+|+..+++.++.++.+ .||+||+|+||+| .|++........   ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~---~~~~  236 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF---RLLF  236 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH---HHHH
Confidence                               123567999999999999999999975 6999999999999 788875422110   0111


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       213 ~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ......+.+++.+|++.|+.+++++++.....+|+.+..||+.
T Consensus       237 ~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        237 PPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            1122345567889999999999999987778899998888763

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-35  Score=269.03  Aligned_cols=241  Identities=30%  Similarity=0.447  Sum_probs=207.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC---
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ---   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~---   86 (367)
                      ++++||||+||||+++|++|+++|++|++. .|+.++.++..+.+...+.++.++.+|++|++++.++++++.+.++   
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            499999999999999999999999998774 7888777777777665566788999999999999999999987752   


Q ss_pred             --CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           87 --GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        87 --g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                        +++|++|||||......+.+.+.+.|+.++++|+.+++++++.++++|.+  .+++|++||..+..+.++...|++||
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~Y~~sK  164 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYGLSK  164 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcchHhhH
Confidence              36999999999877777778899999999999999999999999999855  37999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.++.+.|+++++++||++.|++.........   .........+.+++.+++|+|+++.+++++.+.++
T Consensus       165 ~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  241 (254)
T PRK12746        165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE---IRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWV  241 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh---HHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCc
Confidence            999999999999999889999999999999998765433222   22223345667888999999999999998877889


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      +|+.+.++||..
T Consensus       242 ~g~~~~i~~~~~  253 (254)
T PRK12746        242 TGQIIDVSGGFC  253 (254)
T ss_pred             CCCEEEeCCCcc
Confidence            999999999854

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.2e-35  Score=266.33  Aligned_cols=240  Identities=38%  Similarity=0.532  Sum_probs=213.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|+++ +|+.++.+...+.+...+.++.++.+|+++++++.++++.+.+.+ +++
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   84 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-GKI   84 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence            399999999999999999999999999998 999888877777776656678899999999999999999998888 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||.....++.+.+.+.+++.+++|+.+++++++.+.+.+.+++.+++|++||..+..+.+...+|+++|++++.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~  164 (247)
T PRK05565         85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNA  164 (247)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHH
Confidence            99999999886666777889999999999999999999999999988878999999999999888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.++...|+++++++||+++|++.......     .........+.+++.+++|+|+.+.+++++....++|+.+
T Consensus       165 ~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (247)
T PRK05565        165 FTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-----DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQII  239 (247)
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCccCccccccChH-----HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence            99999999988899999999999999987654322     1122223456677889999999999999998899999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      .+|+|+.
T Consensus       240 ~~~~~~~  246 (247)
T PRK05565        240 TVDGGWT  246 (247)
T ss_pred             EecCCcc
Confidence            9999964

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-35  Score=268.50  Aligned_cols=243  Identities=26%  Similarity=0.368  Sum_probs=210.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++++||||+||||++++++|+++|++|++++|+.++++.+.+.+.  +.++.++.+|++|++++.++++++.+++ +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            3589999999999999999999999999999999988877776663  4568889999999999999999999888 889


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||.....++.+.+.+.|+..+++|+.+++.+++++.+.+.+++.++||++||..+... .+...|+++|++++.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999999987766777788999999999999999999999999998777899999999876543 456789999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.+++++|++|++++||++.|++.......  ............|..++.+++|+++++++|+++.+.+++|+.+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~  235 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA--NPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCL  235 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEE
Confidence            99999999999999999999999999976432211  1123343444667889999999999999999988889999999


Q ss_pred             EeCCCcccc
Q 035642          250 CVDGGMTVN  258 (367)
Q Consensus       250 ~vdgG~~~~  258 (367)
                      .+|||....
T Consensus       236 ~~~~g~~~~  244 (257)
T PRK07074        236 PVDGGLTAG  244 (257)
T ss_pred             EeCCCcCcC
Confidence            999997663

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=274.98  Aligned_cols=228  Identities=23%  Similarity=0.306  Sum_probs=193.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|++++.++++++.+.+ +
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   82 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-G   82 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence            344 99999999999999999999999999999999988888888887667778899999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..+.++...|++||++
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  162 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYG  162 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHH
Confidence            999999999998777888899999999999999999999999999997665 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh---hhHHHHHHhhcCC-CCCCCCHHHHHHHHHHHh
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA---KNKIVEGLVSRTP-ICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~p-~~~~~~~~dvA~ai~~L~  237 (367)
                      +.+|+++++.|++++||+|++|+||+++|++.........   ............+ ...+.+|+|+|+.++..+
T Consensus       163 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        163 VVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI  237 (275)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence            9999999999999899999999999999997643211100   0000000001111 234679999999998877

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.3e-34  Score=265.58  Aligned_cols=243  Identities=30%  Similarity=0.418  Sum_probs=215.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+|+||++++++|+++|++|++++|+.++.....+.+...+.++.++.+|++|++++.++++++.+.+ +++|
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   85 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-GRLD   85 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            499999999999999999999999999999999888877777776666678999999999999999999999888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....++.+.+.++++..+++|+.+++++++.++++|.+++.++||++||..+. .+.++...|+++|+++++
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~  165 (251)
T PRK12826         86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVG  165 (251)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHH
Confidence            9999999887777777889999999999999999999999999988778999999999988 777888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      +++.++.++.+.|++++.++||++.|+.........    ....+....|.+++.+++|+|+++.++++....+++|+.+
T Consensus       166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  241 (251)
T PRK12826        166 FTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ----WAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTL  241 (251)
T ss_pred             HHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEE
Confidence            999999999888999999999999999765432211    1233445678888999999999999999877788999999


Q ss_pred             EeCCCcccc
Q 035642          250 CVDGGMTVN  258 (367)
Q Consensus       250 ~vdgG~~~~  258 (367)
                      .+|||....
T Consensus       242 ~~~~g~~~~  250 (251)
T PRK12826        242 PVDGGATLP  250 (251)
T ss_pred             EECCCccCC
Confidence            999998764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.6e-34  Score=264.15  Aligned_cols=243  Identities=33%  Similarity=0.474  Sum_probs=211.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +++||||+||||++++++|+++|++|+++.|+.+ ..+...+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF-   81 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            444 9999999999999999999999999988777654 3555566665556788899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++||+||.....+..+.+.+.+++.+++|+.+++++++++.+++.+.+.+++|++||..+..+.++...|+++|++
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a  161 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAG  161 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHH
Confidence            78999999999887777777889999999999999999999999999988777899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.+++.++.++...|+++++++||+++|++......     ..........+.+++.+++|+|+++.+++++.+.+++|
T Consensus       162 ~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  236 (248)
T PRK05557        162 VIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-----DVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITG  236 (248)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccc
Confidence            9999999999998889999999999999987654311     13344455667788899999999999999877788999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||+.+
T Consensus       237 ~~~~i~~~~~~  247 (248)
T PRK05557        237 QTLHVNGGMVM  247 (248)
T ss_pred             cEEEecCCccC
Confidence            99999999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=265.60  Aligned_cols=237  Identities=35%  Similarity=0.501  Sum_probs=207.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR----NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R----~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++||||+||||++++++|+++|++|++++|    +.+..++..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   85 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF-   85 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            38999999999999999999999999998665    4455555666666556788999999999999999999998887 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHH-HHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH-PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~-~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++++++++. +.+++++.++||++||..+..+.++...|+++|+
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~  165 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKA  165 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHH
Confidence            789999999999877777888999999999999999999999999 6666666789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.++++++.++++.|+++++++||+++|++......       ........|..++.+++|+|+++.+++++....++
T Consensus       166 a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  238 (249)
T PRK12827        166 GLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP-------TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVT  238 (249)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch-------HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999998889999999999999997654321       12334556777888999999999999988888999


Q ss_pred             ccEEEeCCCc
Q 035642          246 GQVICVDGGM  255 (367)
Q Consensus       246 G~~i~vdgG~  255 (367)
                      |+.+.+|||.
T Consensus       239 g~~~~~~~g~  248 (249)
T PRK12827        239 GQVIPVDGGF  248 (249)
T ss_pred             CcEEEeCCCC
Confidence            9999999986

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=264.11  Aligned_cols=230  Identities=21%  Similarity=0.239  Sum_probs=197.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCC--HHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSS--REQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd--~~sv~~~~~~~~~~   84 (367)
                      +++ +++||||+||||++++++|+++|++|++++|+.+++++..+++... +....++.+|+++  .+++.++++++.+.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            344 9999999999999999999999999999999998888887777553 3356788899976  57889999888887


Q ss_pred             cCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +++++|++|||||.... .++.+.+.++|++.+++|+.|++++++++++.|.+.+.++||++||..+..+.++..+|++|
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGAS  163 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHh
Confidence            64579999999997543 46778899999999999999999999999999987778999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKD-NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~-gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      |++++.++++++.|+.++ +|+|++|+||+++|++.........             ..+..+++|++.+++|++++++.
T Consensus       164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~  230 (239)
T PRK08703        164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA-------------KSERKSYGDVLPAFVWWASAESK  230 (239)
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC-------------ccccCCHHHHHHHHHHHhCcccc
Confidence            999999999999999876 6999999999999998654321111             11345899999999999999999


Q ss_pred             CccccEEEe
Q 035642          243 YITGQVICV  251 (367)
Q Consensus       243 ~itG~~i~v  251 (367)
                      ++||+++.|
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999864

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-34  Score=269.45  Aligned_cols=222  Identities=22%  Similarity=0.285  Sum_probs=190.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.+++++..+      ..+.++.+|++|+++++++++++.+.+ +++|
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~id   76 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEE-GRID   76 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            499999999999999999999999999999999877654432      237788999999999999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||+....++.+.+.++++.++++|+.|++.+++.++|.|++++.|+||++||..+..+.+....|++||++++++
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  156 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF  156 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999888889999999999888888888999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccC--------Ch--h-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--------DP--A-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--------~~--~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++.|+++.||++++|+||+++|++......        ..  . .....+.+....+.+++.+|+|+|++++++++.
T Consensus       157 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        157 SDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999997532110        00  0 011223444455778899999999999999964

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.8e-34  Score=261.81  Aligned_cols=244  Identities=32%  Similarity=0.418  Sum_probs=203.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ ++|||||+||||++++++|+++|++|++..|+ .+......+.+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-   82 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-
Confidence            444 99999999999999999999999999887654 444555555555556678889999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....++.+.+.+.+++.+++|+.+++++++++.++|++  .++||++||.++..+.++...|++||++
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~  160 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKAA  160 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHHH
Confidence            89999999999877777777888999999999999999999999999865  3799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.++++ +++++.+.||+++|++........... .........+.+++.+|+|+|++++++++  ...++|
T Consensus       161 ~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~--~~~~~g  236 (252)
T PRK06077        161 VINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMS-EKEFAEKFTLMGKILDPEEVAEFVAAILK--IESITG  236 (252)
T ss_pred             HHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhccccc-HHHHHHhcCcCCCCCCHHHHHHHHHHHhC--ccccCC
Confidence            99999999999988 999999999999999764432211100 00111123456678999999999999994  456799


Q ss_pred             cEEEeCCCccccC
Q 035642          247 QVICVDGGMTVNG  259 (367)
Q Consensus       247 ~~i~vdgG~~~~~  259 (367)
                      +.+.+|+|..+..
T Consensus       237 ~~~~i~~g~~~~~  249 (252)
T PRK06077        237 QVFVLDSGESLKG  249 (252)
T ss_pred             CeEEecCCeeccC
Confidence            9999999988764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=5.8e-34  Score=260.15  Aligned_cols=241  Identities=34%  Similarity=0.480  Sum_probs=213.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+....++...+.++.++.+|++|++++.++++.+.+.+ +++|
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   84 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-GALD   84 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            389999999999999999999999999999999988887777777667789999999999999999999998888 8899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++||+||.....+..+.+.+.++..++.|+.+++++++++.++|.+.+.++||++||..+..+..+...|+.+|++++.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~  164 (246)
T PRK05653         85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGF  164 (246)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHH
Confidence            99999998777667777899999999999999999999999999877778999999998888888889999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      +++++.++.+.|+++++++||.+.++......     ....+......|.+++.+++|+|+++.+++++....++|+.+.
T Consensus       165 ~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  239 (246)
T PRK05653        165 TKALALELASRGITVNAVAPGFIDTDMTEGLP-----EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIP  239 (246)
T ss_pred             HHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            99999999888999999999999998764311     1123334455677888999999999999998878889999999


Q ss_pred             eCCCccc
Q 035642          251 VDGGMTV  257 (367)
Q Consensus       251 vdgG~~~  257 (367)
                      ++||..+
T Consensus       240 ~~gg~~~  246 (246)
T PRK05653        240 VNGGMYM  246 (246)
T ss_pred             eCCCeeC
Confidence            9999763

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=4.9e-34  Score=261.39  Aligned_cols=240  Identities=30%  Similarity=0.359  Sum_probs=206.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|++ ..|+.++.++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            37999999999999999999999999976 4688777777777776666678889999999999999999998888 899


Q ss_pred             cEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC---CCCEEEEecCcccccCCCC-CccHHHHH
Q 035642           90 NLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS---GNGIIVFISSVAGVTAAPL-TPLYGPYN  164 (367)
Q Consensus        90 D~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~---~~g~IV~iSS~~~~~~~~~-~~~Y~asK  164 (367)
                      |++|||||.. ...+..+.+.++|+.++++|+.+++++++++++.|.+.   ..|+||++||..+..+.++ ...|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999975 33566778899999999999999999999999998764   2578999999988887775 46899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.+++.++.++.+.||++++++||+++|++..... .   +..........|.++..+++|+|+++++++++...++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~  236 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-E---PGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYV  236 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-C---HHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCc
Confidence            99999999999999888999999999999999754321 1   1133344556788888899999999999999888889


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      +|+.+.+|||.
T Consensus       237 ~g~~~~~~g~~  247 (247)
T PRK09730        237 TGSFIDLAGGK  247 (247)
T ss_pred             cCcEEecCCCC
Confidence            99999999974

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=3.7e-34  Score=297.35  Aligned_cols=248  Identities=24%  Similarity=0.324  Sum_probs=212.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+.++...+.+...  ..++..+.+|++|++++.++++++.+.+
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            445 9999999999999999999999999999999998887777766532  2367789999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|++|||||.....++.+.+.++|+..+++|+.+++++++.+++.|++++ .|+||++||..+..+.++..+|++||
T Consensus       492 -g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK  570 (676)
T TIGR02632       492 -GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK  570 (676)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence             8999999999987767778889999999999999999999999999998765 57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCC--ccccc-cCCh------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTS--LSDAI-RHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~--~~~~~-~~~~------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      +++++++++++.|+++.||+||+|+||.+.++  ++... ....      ...+..+.+....++++.++|+|+|+++.|
T Consensus       571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~  650 (676)
T TIGR02632       571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFF  650 (676)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999998642  32211 0000      011122334567889999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCccc
Q 035642          236 LCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+++...++||+.+.+|||...
T Consensus       651 L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       651 LASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HhCCcccCCcCcEEEECCCchh
Confidence            9988888999999999999764

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=261.19  Aligned_cols=232  Identities=25%  Similarity=0.301  Sum_probs=199.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.+++.+.+...+.++.++.+|+++++++.++++++.+++ +++|
T Consensus         7 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   85 (241)
T PRK07454          7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GCPD   85 (241)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            489999999999999999999999999999999988888777776666788899999999999999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.+++++++++|+.+++++++.++++|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  165 (241)
T PRK07454         86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAF  165 (241)
T ss_pred             EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHH
Confidence            99999998777777788899999999999999999999999999887789999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc-cEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG-QVI  249 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG-~~i  249 (367)
                      +++++.++++.|+++++|+||+++|++.......           ......+..+++|+|+++++++++....+.+ -++
T Consensus       166 ~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-----------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~  234 (241)
T PRK07454        166 TKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-----------ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTL  234 (241)
T ss_pred             HHHHHHHhhhhCCEEEEEecCcccCCcccccccc-----------cccccccCCCHHHHHHHHHHHHcCCccceeeeEEe
Confidence            9999999998899999999999999985421100           0111235679999999999999866554443 334


Q ss_pred             EeCCC
Q 035642          250 CVDGG  254 (367)
Q Consensus       250 ~vdgG  254 (367)
                      ..++|
T Consensus       235 ~~~~~  239 (241)
T PRK07454        235 MPSAG  239 (241)
T ss_pred             ecCCC
Confidence            43444

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=266.78  Aligned_cols=213  Identities=24%  Similarity=0.297  Sum_probs=190.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|||||||||++++++|+++|++|++++|+.+++++..+++.    ++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-   76 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL-   76 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3445 99999999999999999999999999999999988877666653    57788999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||+....++.+.+.+.+++++++|+.|++++++.++|.|++++.|+||++||.++..+.++...|++||++
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  156 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA  156 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence            89999999999987778888899999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++++++.|+.+.||++++|+||++.|++......              .....+.+|+|+|+.+++++..
T Consensus       157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~--------------~~~~~~~~~~~va~~~~~~l~~  215 (273)
T PRK07825        157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG--------------AKGFKNVEPEDVAAAIVGTVAK  215 (273)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc--------------ccCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999998653211              0112357999999999999854

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=259.36  Aligned_cols=230  Identities=28%  Similarity=0.386  Sum_probs=198.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.      .     ...++.+|++|+++++++++++.+.+  ++|
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d   70 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH--PVD   70 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC--CCc
Confidence            4899999999999999999999999999999987541      1     12467899999999999999998875  589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.+++++.+++|+.+++++.++++|.|++.+.++||++||.. ..+.++..+|++||++++++
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~  149 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGC  149 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHH
Confidence            99999999877777788899999999999999999999999999888789999999985 45667788999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      +++++.|+++.||++++|+||++.|++.........  ..........|.++..+|+|+|.++++++++...+++|+.+.
T Consensus       150 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (234)
T PRK07577        150 TRTWALELAEYGITVNAVAPGPIETELFRQTRPVGS--EEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG  227 (234)
T ss_pred             HHHHHHHHHhhCcEEEEEecCcccCcccccccccch--hHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence            999999999999999999999999998654322111  122334456788888899999999999998888899999999


Q ss_pred             eCCCcc
Q 035642          251 VDGGMT  256 (367)
Q Consensus       251 vdgG~~  256 (367)
                      +|||.+
T Consensus       228 ~~g~~~  233 (234)
T PRK07577        228 VDGGGS  233 (234)
T ss_pred             ecCCcc
Confidence            999864

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.5e-36  Score=250.70  Aligned_cols=238  Identities=27%  Similarity=0.407  Sum_probs=210.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .++ +.+||||.+|+|++.+++|+++|+.|++.+-..++.++.++++   |+++.|.++|+++++++..++...+.+| |
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf-g   82 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF-G   82 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-c
Confidence            456 9999999999999999999999999999999999998888887   7899999999999999999999999999 9


Q ss_pred             CccEEEEcCCCCCC------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCcccccCCC
Q 035642           88 KLNLLVNNAAVAVP------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSVAGVTAAP  155 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~~~~~~~~  155 (367)
                      ++|.++||||+...      ..-...+.|++++++++|+.|+|++++...-.|-.+      ..|.|||+.|.+++.+..
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~  162 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT  162 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence            99999999998532      112235789999999999999999999988888543      258899999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVA  234 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~  234 (367)
                      ++.+|++||.++.+|+--++++++..|||+++|.||..+||+....++.     ....+.+.+|+ .|.++|.|-|..+-
T Consensus       163 gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek-----v~~fla~~ipfpsrlg~p~eyahlvq  237 (260)
T KOG1199|consen  163 GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK-----VKSFLAQLIPFPSRLGHPHEYAHLVQ  237 (260)
T ss_pred             chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH-----HHHHHHHhCCCchhcCChHHHHHHHH
Confidence            9999999999999999999999999999999999999999998765432     33344556676 58999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ...  ++.+++|++|.+||-..+
T Consensus       238 aii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  238 AII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHH--hCcccCCeEEEecceecC
Confidence            888  899999999999997654

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-34  Score=265.03  Aligned_cols=237  Identities=23%  Similarity=0.323  Sum_probs=199.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++++...+.+   +..+.++.+|++|+++++++++++.+.+ +++|
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   79 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GRLD   79 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            48999999999999999999999999999999988776655443   4467888999999999999999998888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++.++||++||.++..+.++...|++||++++.+
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGM  159 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence            99999999887888888999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccC----ChhhhHHHHHHhhcCCCCCC-CCHHHHHHHHHHHhCCCCCCcc
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH----DPAKNKIVEGLVSRTPICRP-GEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~p~~~~-~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++.++.++++.||+|++++||+++|++......    ..........+....+.+++ ++|+|+|++++++++.  ....
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~--~~~~  237 (275)
T PRK08263        160 SEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDA--ENPP  237 (275)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcC--CCCC
Confidence            999999999999999999999999998742111    11111122333334456667 8999999999999953  3345


Q ss_pred             ccEEEeCC
Q 035642          246 GQVICVDG  253 (367)
Q Consensus       246 G~~i~vdg  253 (367)
                      ++.+...+
T Consensus       238 ~~~~~~~~  245 (275)
T PRK08263        238 LRLFLGSG  245 (275)
T ss_pred             eEEEeCch
Confidence            66554333

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=9.9e-36  Score=258.88  Aligned_cols=233  Identities=23%  Similarity=0.365  Sum_probs=196.0

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      |+++| .+++|||.||||++++++|+++|..+.++..+.+..+..++ +++  ...++.|++||+++..++++.++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            45667 99999999999999999999999998888888887655444 433  356799999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCCCccH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +| |.+|++||+||+.        ++.+|++++.+|+.|.++-+..++|||.++.   +|-|||+||.+|..|.+-.+.|
T Consensus        80 ~f-g~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   80 TF-GTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             Hh-CceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            99 9999999999987        4667999999999999999999999998654   6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCCccccccCCh---hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECE--QAKDNIRANSIAPGVIRTSLSDAIRHDP---AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       161 ~asKaal~~l~~~la~e--~~~~gIrvn~I~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ++||+++.+|+|++|..  +.+.||+++++|||++.|.+.+.+....   +-........+..|   ..+|.++|..++-
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~v~  227 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAINIVN  227 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHHHH
Confidence            99999999999999876  4567999999999999999887763321   11112222233333   4578999999999


Q ss_pred             HhCCCCCCccccEEEeCCCc
Q 035642          236 LCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++  +- ..+|+.+.+|+|.
T Consensus       228 ai--E~-~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  228 AI--EY-PKNGAIWKVDSGS  244 (261)
T ss_pred             HH--hh-ccCCcEEEEecCc
Confidence            98  33 5699999999987

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=258.82  Aligned_cols=229  Identities=24%  Similarity=0.415  Sum_probs=194.8

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Q 035642           14 FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLV   93 (367)
Q Consensus        14 LVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI   93 (367)
                      |||||++|||++++++|+++|++|++++|+.++++...++++. +.++.++.+|++|++++.++++++     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            6999999999999999999999999999998887776666642 567888999999999999988764     7899999


Q ss_pred             EcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHHHH
Q 035642           94 NNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH  173 (367)
Q Consensus        94 ~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~  173 (367)
                      ||||.....++.+.+.+++++++++|+.+++++++  .+.+.  +.|+||++||.++..+.++...|++||+++++++++
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            99998777777788899999999999999999999  44443  468999999999999889999999999999999999


Q ss_pred             HHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          174 LECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       174 la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      ++.|+.+  +++|+++||++.|++........ ............|.++..+|+|+|+++.+|++  +.+++|+.+.+||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~--~~~~~G~~~~v~g  225 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDA-REAMFAAAAERLPARRVGQPEDVANAILFLAA--NGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccc-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCCcEEEeCC
Confidence            9999875  99999999999999865432211 11233344556788889999999999999996  4688999999999


Q ss_pred             Cccc
Q 035642          254 GMTV  257 (367)
Q Consensus       254 G~~~  257 (367)
                      |..+
T Consensus       226 g~~~  229 (230)
T PRK07041        226 GHAI  229 (230)
T ss_pred             Ceec
Confidence            9753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.5e-34  Score=284.99  Aligned_cols=236  Identities=24%  Similarity=0.316  Sum_probs=202.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||++++++|+++|++|++++|+.  +.+++..+++   +  ..++.+|++|+++++++++.+.+.+ ++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~~-g~  284 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAERH-GG  284 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhC-CC
Confidence            3999999999999999999999999999998853  3333333332   2  3467899999999999999999888 79


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||+.....+.+.+.+.|+.++++|+.|++++++++.+.+..++.++||++||.++..+.+++..|+++|++++
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~  364 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVI  364 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHH
Confidence            99999999998777788889999999999999999999999999655556799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +|+++++.+++++||++|+|+||+++|++.......     ..+......++.+.+.|+|+|+++.||+++.+.++||+.
T Consensus       365 ~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~-----~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~  439 (450)
T PRK08261        365 GLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA-----TREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNV  439 (450)
T ss_pred             HHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh-----HHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCE
Confidence            999999999999999999999999999886543211     111112335677888999999999999999999999999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      +.+|||..+
T Consensus       440 i~v~g~~~~  448 (450)
T PRK08261        440 VRVCGQSLL  448 (450)
T ss_pred             EEECCCccc
Confidence            999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-34  Score=265.56  Aligned_cols=246  Identities=19%  Similarity=0.243  Sum_probs=206.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK-VTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~-~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.. ..++.+|++|+++++++++++.+.+ +++|
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   80 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSMD   80 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            6999999999999999999999999999999998888877777654443 4567899999999999999999888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||.....++.+.+.++++..+++|+.|+++++++++|.|.+. ..|+||++||..+..+.++..+|++||+++++
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            99999998777777888999999999999999999999999999764 35899999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh--hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP--AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++++++.|+.++||+|++|+||+++|++........  ...+....... ...++..+|+|+|+.+++++. .+.+++|+
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~-~~~~~~~~  238 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE-KNRYLVYT  238 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh-cCCeEEec
Confidence            999999999999999999999999999876532110  00111111111 124567899999999999995 56788888


Q ss_pred             EEEeCCCccccCC
Q 035642          248 VICVDGGMTVNGF  260 (367)
Q Consensus       248 ~i~vdgG~~~~~~  260 (367)
                      .+.+++|+.+..+
T Consensus       239 ~~~~~~~~~~~~~  251 (272)
T PRK07832        239 SPDIRALYWFKRK  251 (272)
T ss_pred             CcchHHHHHHHhc
Confidence            8888888776543

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=264.28  Aligned_cols=226  Identities=18%  Similarity=0.247  Sum_probs=190.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++++.+.+.   .+.++.++.+|++|++++.++++.+.+.+ +++|
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~~d   80 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GPID   80 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            4899999999999999999999999999999998776654433   24568889999999999999999999888 8899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....+..+.+.+.|++++++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||++++++
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            99999999877778888999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCC-----hhhhHHH---HHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-----PAKNKIV---EGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-----~~~~~~~---~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++++.++++.|+++++|+||++.|++.......     .......   .......+..++.+|+|+|+++++++...
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            9999999998999999999999999875432111     0000011   11112234566789999999999998543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.5e-34  Score=291.01  Aligned_cols=230  Identities=23%  Similarity=0.262  Sum_probs=198.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +.+ ++|||||+||||++++++|+++|++|++++|+.++++++.++++..+.++.++.+|++|++++.++++++.+.+ |
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g  391 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH-G  391 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc-C
Confidence            344 99999999999999999999999999999999999888888887767789999999999999999999999988 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||+....++.+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++...|++||+|
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  471 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAA  471 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHH
Confidence            999999999998777888889999999999999999999999999998765 5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh---hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK---NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++++++.|++++||+|++|+||+++|++..........   .+.........+..+..+|+++|++++++++.
T Consensus       472 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        472 VLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999987654211110   00111111222334556899999999999953

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=261.84  Aligned_cols=222  Identities=24%  Similarity=0.271  Sum_probs=195.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++++++.++++.+.+.+ +++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            69999999999999999999999999999999999888888887777789999999999999999999999888 88999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      ||||||......+.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||.++..+.++...|+++|+++++++
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            99999998777788889999999999999999999999999998887899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++.|+.+.||++++|+||+++|++......... .........    .....+++|+|+.++..+.
T Consensus       161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~vA~~i~~~l~  224 (270)
T PRK05650        161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL----EKSPITAADIADYIYQQVA  224 (270)
T ss_pred             HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh----hcCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999998765432211 111111111    1234689999999999885

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=263.31  Aligned_cols=225  Identities=21%  Similarity=0.246  Sum_probs=187.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.+      ..+.++.+|++|+++++++++++.+.++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34589999999999999999999999999999999877654432      146788999999999999999997776468


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||.....++.+.+.++++.++++|+.|++.+++.++|.|++++.|+||++||..+..+.+....|++||++++
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999998877888889999999999999999999999999999888899999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC----------hhhhH---HHHHHhh-cCCCCCCCCHHHHHHHHH
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD----------PAKNK---IVEGLVS-RTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~----------~~~~~---~~~~~~~-~~p~~~~~~~~dvA~ai~  234 (367)
                      +++++++.|++++||+|++|+||+++|++.......          .....   ....... ..+.....+|+++|+.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            999999999999999999999999999986542110          00000   0111111 112223468999999999


Q ss_pred             HHhCC
Q 035642          235 FLCFP  239 (367)
Q Consensus       235 ~L~s~  239 (367)
                      ..+..
T Consensus       237 ~a~~~  241 (277)
T PRK05993        237 HALTA  241 (277)
T ss_pred             HHHcC
Confidence            98843

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=5.7e-33  Score=255.48  Aligned_cols=246  Identities=30%  Similarity=0.384  Sum_probs=209.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|++|+++++++++.+.+.+ +++|
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   80 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGLD   80 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            479999999999999999999999999999999988888877776656678899999999999999999998888 7899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||........+.+.+++++++++|+.|++.+++++++.|++.+.+++|++||..+..+.+....|+++|++++.+
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~  160 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL  160 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence            99999998766666677889999999999999999999999999888788999999998888888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHH-HHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKI-VEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~-~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      ++.++.++.+.|++++.++||++.|++........      ..... ...+....+.+.+.+++|+|+++++++++....
T Consensus       161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  240 (255)
T TIGR01963       161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAG  240 (255)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccC
Confidence            99999999888999999999999998753321100      00001 111223445667899999999999999776667


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||+..
T Consensus       241 ~~g~~~~~~~g~~~  254 (255)
T TIGR01963       241 ITGQAIVLDGGWTA  254 (255)
T ss_pred             ccceEEEEcCcccc
Confidence            89999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-33  Score=268.60  Aligned_cols=225  Identities=22%  Similarity=0.213  Sum_probs=183.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||+||||++++++|+++|++|++++|+.+++++..+++.    .+.++.+|++|.++++++++++.+.+ 
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~-   97 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG-   97 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC-
Confidence            4455 99999999999999999999999999999999988877766653    36788999999999999999999888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------CC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------AA  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------~~  154 (367)
                      +++|+||||||+....  .+.+.+.|+..+++|+.|+++++++++|.|++++.++||++||.++..            +.
T Consensus        98 ~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  175 (315)
T PRK06196         98 RRIDILINNAGVMACP--ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGY  175 (315)
T ss_pred             CCCCEEEECCCCCCCC--CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCC
Confidence            8999999999986432  344677899999999999999999999999887778999999976532            23


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCCC-CCCCHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPIC-RPGEPDEVSSL  232 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~-~~~~~~dvA~a  232 (367)
                      ++..+|++||++++.+++.++.+++++||+||+|+||++.|++...........  ...+. ...|+. ++.+|+++|.+
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA--LGWVDEHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh--hhhhhhhhhhhhhhcCCHhHHHHH
Confidence            345689999999999999999999989999999999999999875443211100  00110 112332 57899999999


Q ss_pred             HHHHhCCCC
Q 035642          233 VAFLCFPAA  241 (367)
Q Consensus       233 i~~L~s~~~  241 (367)
                      ++||++...
T Consensus       254 ~~~l~~~~~  262 (315)
T PRK06196        254 QVWAATSPQ  262 (315)
T ss_pred             HHHHhcCCc
Confidence            999996443

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-33  Score=257.39  Aligned_cols=243  Identities=34%  Similarity=0.498  Sum_probs=206.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+..++..+....  .++.++.+|++|++++.++++++.+.+ +++|
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   88 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVERF-GGLD   88 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            4999999999999999999999999999999998877766655532  267889999999999999999999888 8899


Q ss_pred             EEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           91 LLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        91 ~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|||+||.. ......+.+.+.+++++++|+.+++++++.+.+.+...+. ++|+++||.++..+.++...|+++|++++
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~  168 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV  168 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence            999999987 4455667788999999999999999999999999877665 78999999998888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      .+++.++.++...++++++++||++.|++.......      ..............|.+++.+++|+|+++.+++++...
T Consensus       169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  248 (264)
T PRK12829        169 GLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAAR  248 (264)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            999999999988899999999999999976543211      01111223344456778899999999999999987677


Q ss_pred             CccccEEEeCCCcc
Q 035642          243 YITGQVICVDGGMT  256 (367)
Q Consensus       243 ~itG~~i~vdgG~~  256 (367)
                      .++|+.+.+|||..
T Consensus       249 ~~~g~~~~i~~g~~  262 (264)
T PRK12829        249 YITGQAISVDGNVE  262 (264)
T ss_pred             CccCcEEEeCCCcc
Confidence            88999999999975

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-32  Score=257.57  Aligned_cols=230  Identities=15%  Similarity=0.247  Sum_probs=194.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .+++ +++||||+||||++++++|+++|++|++++|+.+.+++..+.+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL-   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4444 99999999999999999999999999999999888777776666556678899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....+..+.+.+.+++.+++|+.+++++++++++.|.+++.|+||++||..+..+.++...|+++|++
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            88999999999877667777889999999999999999999999999987778999999999988888888899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh--cCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++++++.++.+.||++++|+||+++|++......... .........  ....+++.+++|+|++++++++.
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVI-GPMLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhh-hHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            9999999999998889999999999999986543222111 111111111  22345688999999999999964

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=262.79  Aligned_cols=219  Identities=18%  Similarity=0.271  Sum_probs=188.4

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.+.+++ +++||||+||||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|++++.++++++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3455665 999999999999999999999999999999999988888888776667788999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCC--CHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCCCCccH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDT--TAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAPLTPLY  160 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~--~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~~~~~Y  160 (367)
                      .+ +++|++|||||.....++.+.  +.++++.++++|+.|+++++++++|+|++.+.|+||++||.++.. +.++...|
T Consensus       114 ~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y  192 (293)
T PRK05866        114 RI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY  192 (293)
T ss_pred             Hc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence            88 899999999998766555442  457889999999999999999999999888889999999987654 35778899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++||+|+++++++++.|++++||+|++|+||+++|++.......             .. ....+|+++|+.++..+.
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-------------~~-~~~~~pe~vA~~~~~~~~  256 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-------------DG-LPALTADEAAEWMVTAAR  256 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-------------cC-CCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999986432110             01 123589999999988884

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=258.86  Aligned_cols=212  Identities=22%  Similarity=0.269  Sum_probs=185.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.+++++..+++...+ ++.++.+|++|++++.++++++.+++ +++|
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~id   80 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLPD   80 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            589999999999999999999999999999999988877766664433 78899999999999999999999888 8899


Q ss_pred             EEEEcCCCCCCCCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||........+ .+.+.++.++++|+.|++++++.++|.|++++.|+||++||.++..+.++...|++||++++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            9999999865433333 678999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++++++.|++++||++++|+||++.|++.....               .+.....+|+++|+.++.++..
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------------~~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP---------------YPMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC---------------CCCCCccCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999754211               1112245899999999998853

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=253.35  Aligned_cols=234  Identities=30%  Similarity=0.371  Sum_probs=202.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+|+||++++++|+++|++|++++|+.++..+..+++...  ....+.+|++|.+++.++++++.+.+ 
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF-   80 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            3455 9999999999999999999999999999999987776666655433  35667899999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++||+||......+.+.+.+.+++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.++...|+++|++
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a  160 (239)
T PRK12828         81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAG  160 (239)
T ss_pred             CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHH
Confidence            89999999999876666667789999999999999999999999999988778999999999998888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.+++.++.++.+.|++++.+.||++.|++.......             .+...+.+++|+|+++++++++...+++|
T Consensus       161 ~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~-------------~~~~~~~~~~dva~~~~~~l~~~~~~~~g  227 (239)
T PRK12828        161 VARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD-------------ADFSRWVTPEQIAAVIAFLLSDEAQAITG  227 (239)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc-------------hhhhcCCCHHHHHHHHHHHhCcccccccc
Confidence            99999999999988899999999999999854321110             12334678999999999999877778899


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||...
T Consensus       228 ~~~~~~g~~~~  238 (239)
T PRK12828        228 ASIPVDGGVAL  238 (239)
T ss_pred             eEEEecCCEeC
Confidence            99999999753

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=7e-33  Score=252.29  Aligned_cols=238  Identities=36%  Similarity=0.540  Sum_probs=207.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||++|+||++++++|+++|++|++++|+. +..+...+.+...+.++.++.+|++|+++++++++.+.+.+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999999999999999999998875 55556666666666778899999999999999999998888 89999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      +||+||......+.+.+.+.+++.+++|+.+++++++.+.+++.+.+.+++|++||.++..+.++...|+++|++++.++
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999987666666778899999999999999999999999987777789999999999999899999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                      +.++.++...|++++.++||+++|++.....  .   .....+....+.+++++++|+|+++++++++...+.+|+.+++
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  234 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKLS--E---KVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV  234 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhcC--h---HHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence            9999999888999999999999998754322  1   1233344567788899999999999999987777899999999


Q ss_pred             CCCcc
Q 035642          252 DGGMT  256 (367)
Q Consensus       252 dgG~~  256 (367)
                      |+|..
T Consensus       235 ~~g~~  239 (239)
T TIGR01830       235 DGGMY  239 (239)
T ss_pred             CCCcC
Confidence            99863

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=251.98  Aligned_cols=241  Identities=32%  Similarity=0.479  Sum_probs=207.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+|+||++++++|+++|++|++..|+. +..+...+.+...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   85 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF-GRI   85 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-CCC
Confidence            4899999999999999999999999988766654 44445555555556678899999999999999999998888 889


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++||+||.....++.+.+.+.++..+++|+.+++++++.+.+++++.+.+++|++||..+..+.++...|+.+|+++++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~  165 (249)
T PRK12825         86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVG  165 (249)
T ss_pred             CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHH
Confidence            99999999877777777889999999999999999999999999988888999999999998888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      +++.++.++.+.|++++.++||++.|++.........    ... ....|.+++.+++|+++++.+++++...+.+|+.+
T Consensus       166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (249)
T PRK12825        166 LTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR----EAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVI  240 (249)
T ss_pred             HHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH----Hhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence            9999999998889999999999999998654322111    111 22467788999999999999999877788999999


Q ss_pred             EeCCCccc
Q 035642          250 CVDGGMTV  257 (367)
Q Consensus       250 ~vdgG~~~  257 (367)
                      .++||...
T Consensus       241 ~i~~g~~~  248 (249)
T PRK12825        241 EVTGGVDV  248 (249)
T ss_pred             EeCCCEee
Confidence            99999653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=4.5e-33  Score=265.15  Aligned_cols=239  Identities=19%  Similarity=0.132  Sum_probs=188.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++++++||||++|||++++++|+++| ++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence            34599999999999999999999999 999999999988888877775445678889999999999999999998887 8


Q ss_pred             CccEEEEcCCCCCCC-CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccC-----------
Q 035642           88 KLNLLVNNAAVAVPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTA-----------  153 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~-~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~-----------  153 (367)
                      ++|++|||||+..+. +..+.+.+.|++++++|+.|++++++.++|+|++++  .|+||++||.++...           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            999999999985432 334568899999999999999999999999998763  489999999877421           


Q ss_pred             ----------------------CCCCccHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-cCCccccccCChhhhH
Q 035642          154 ----------------------APLTPLYGPYNGAMNQLTKHLECEQA-KDNIRANSIAPGVI-RTSLSDAIRHDPAKNK  209 (367)
Q Consensus       154 ----------------------~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~I~PG~v-~t~~~~~~~~~~~~~~  209 (367)
                                            ..++.+|++||+|+..+++.+++++. +.||+|++|+||+| .|++.......  ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~--~~~  238 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL--FRT  238 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH--HHH
Confidence                                  12356799999999999999999985 46899999999999 69987542111  000


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          210 IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       210 ~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                      ....+ .....+.+.+|++.|+.+++++.+.....+|..+..
T Consensus       239 ~~~~~-~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~  279 (314)
T TIGR01289       239 LFPPF-QKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSW  279 (314)
T ss_pred             HHHHH-HHHHhccccchhhhhhhhHHhhcCcccCCCceeeec
Confidence            11111 111123457899999999998865443345655543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=257.63  Aligned_cols=238  Identities=21%  Similarity=0.233  Sum_probs=195.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC-
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK-   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~-   88 (367)
                      ++++||||+||||++++++|+++|++|++++|+. +.+++..+   ..+.++.++.+|++++++++++++++.+.+ +. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSI-QED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhc-Ccc
Confidence            3799999999999999999999999999999987 33333222   225578889999999999999999987766 32 


Q ss_pred             -c--cEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHHH
Q 035642           89 -L--NLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        89 -i--D~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                       +  +++|||||...+ .++.+.+.++|.+.+++|+.+++.+++.++++|++. ..++||++||..+..+.++...|+++
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS  157 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHH
Confidence             2  289999998643 567788999999999999999999999999999874 35799999999999899999999999


Q ss_pred             HHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          164 NGAMNQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       164 Kaal~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      |+|++++++.++.|++  +.||+|++|+||++.|++....... .......+.+....+.+++.+|+|+|+.+++++++.
T Consensus       158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  237 (251)
T PRK06924        158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE  237 (251)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc
Confidence            9999999999999975  4689999999999999986532111 111112233444557788999999999999999864


Q ss_pred             CCCccccEEEeCC
Q 035642          241 ASYITGQVICVDG  253 (367)
Q Consensus       241 ~~~itG~~i~vdg  253 (367)
                       .+++|+.+.+|+
T Consensus       238 -~~~~G~~~~v~~  249 (251)
T PRK06924        238 -DFPNGEVIDIDE  249 (251)
T ss_pred             -cCCCCCEeehhh
Confidence             789999999886

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-32  Score=252.02  Aligned_cols=228  Identities=22%  Similarity=0.270  Sum_probs=198.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCC--CHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLS--SREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dls--d~~sv~~~~~~~~~~~~g   87 (367)
                      ++++||||+||||.+++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++  ++++++++++.+.+.+ +
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~   91 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF-G   91 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh-C
Confidence            399999999999999999999999999999999988888777776543 35667777775  8899999999999988 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||.... .++.+.+.+.|++.+++|+.|++++++++.++|.+++.++||++||..+..+.++..+|++||++
T Consensus        92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  171 (247)
T PRK08945         92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFA  171 (247)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHH
Confidence            99999999998543 45667788999999999999999999999999988888999999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.+++.++.++...||++++++||++.|++.......             ....++.+|+|+++.++|++++.+.+++|
T Consensus       172 ~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (247)
T PRK08945        172 TEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG-------------EDPQKLKTPEDIMPLYLYLMGDDSRRKNG  238 (247)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc-------------ccccCCCCHHHHHHHHHHHhCccccccCC
Confidence            99999999999999999999999999999865332211             11235679999999999999998999999


Q ss_pred             cEEEeC
Q 035642          247 QVICVD  252 (367)
Q Consensus       247 ~~i~vd  252 (367)
                      +.+...
T Consensus       239 ~~~~~~  244 (247)
T PRK08945        239 QSFDAQ  244 (247)
T ss_pred             eEEeCC
Confidence            987643

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-32  Score=258.23  Aligned_cols=227  Identities=26%  Similarity=0.309  Sum_probs=190.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.+ +++|
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~id   85 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF-GAVH   85 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            399999999999999999999999999999999888888888776666688899999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC------CEEEEecCcccccCCCCCccHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN------GIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~------g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +||||||.....++.+.+.++|+.++++|+.|+++++++++|+|.++..      |+||++||.++..+.++...|++||
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  165 (287)
T PRK06194         86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSK  165 (287)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHH
Confidence            9999999987777778899999999999999999999999999987654      7999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHhCC--CCeEEEEEecCcccCCccccccCChh----------hhHHHHHHhhcCCCCCCCCHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAK--DNIRANSIAPGVIRTSLSDAIRHDPA----------KNKIVEGLVSRTPICRPGEPDEVSSL  232 (367)
Q Consensus       165 aal~~l~~~la~e~~~--~gIrvn~I~PG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~p~~~~~~~~dvA~a  232 (367)
                      ++++.++++++.+++.  .+|++++++||++.|++.......+.          ..................+++|+|+.
T Consensus       166 ~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~  245 (287)
T PRK06194        166 HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQL  245 (287)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHH
Confidence            9999999999999873  47999999999999998754321110          00011111111111123699999999


Q ss_pred             HHHHhC
Q 035642          233 VAFLCF  238 (367)
Q Consensus       233 i~~L~s  238 (367)
                      ++.++.
T Consensus       246 i~~~~~  251 (287)
T PRK06194        246 VFDAIR  251 (287)
T ss_pred             HHHHHH
Confidence            999773

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.7e-33  Score=265.49  Aligned_cols=208  Identities=21%  Similarity=0.277  Sum_probs=173.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQ-GK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~   88 (367)
                      +++|||||+|||+++|++|+++|++|++++|+.++++++.+++...  +.++..+.+|+++  ++.+.++++.+.++ .+
T Consensus        55 ~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         55 WALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLD  132 (320)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999988888654  3467888999985  22333333333331 24


Q ss_pred             ccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-C-CCCCccHHHHH
Q 035642           89 LNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-A-APLTPLYGPYN  164 (367)
Q Consensus        89 iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~-~~~~~~Y~asK  164 (367)
                      +|++|||||+...  .++.+.+.+++++++++|+.|++.++++++|.|.+++.|+||++||.++.. + .++..+|++||
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK  212 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK  212 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence            7799999998643  457788999999999999999999999999999888889999999999865 3 57889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +++++|+++++.|++++||+|++|+||+++|++.....   .          ..   ...+|+++|+.++..+
T Consensus       213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~---~----------~~---~~~~p~~~A~~~~~~~  269 (320)
T PLN02780        213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR---S----------SF---LVPSSDGYARAALRWV  269 (320)
T ss_pred             HHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC---C----------CC---CCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999864210   0          00   1348999999999887

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-33  Score=258.89  Aligned_cols=243  Identities=19%  Similarity=0.227  Sum_probs=201.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||+++++.|+++|++|++++|+.+..+...+++...  +.++.++.+|++|++++++ ++++.+.+ ++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-GR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-CC
Confidence            48999999999999999999999999999999988887776665543  3578899999999999999 88888888 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||........+.+.+++++.+++|+.++++++++++|+|++.+.++||++||..+..+.++...|++||++++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~  161 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE  161 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence            99999999988777777888999999999999999999999999998887899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------C--hhhhHHHHHHhh--cCCCCCCCCHHHHHHHHHHHhC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------D--PAKNKIVEGLVS--RTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~--~~~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++++.++.++||++++++||+++|++......      .  .........+..  ..+.+++.+|+|+|++++++++
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  241 (280)
T PRK06914        162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAE  241 (280)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHc
Confidence            99999999999999999999999999997653211      0  000111122211  1345678899999999999996


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +...   +.++.+++|....
T Consensus       242 ~~~~---~~~~~~~~~~~~~  258 (280)
T PRK06914        242 SKRP---KLRYPIGKGVKLM  258 (280)
T ss_pred             CCCC---CcccccCCchHHH
Confidence            5433   2467776666554

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.7e-32  Score=252.29  Aligned_cols=229  Identities=21%  Similarity=0.291  Sum_probs=189.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||+||||.+++++|+++|++|++++|+.++++.+.+.+   +.++.++.+|++|.++++++++++.+.+ +++|+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id~   77 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNIDV   77 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            6899999999999999999999999999999988877665554   4468889999999999999999998888 88999


Q ss_pred             EEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           92 LVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        92 lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +|||||... ..++.+.+.++|++++++|+.|++.++++++++|.+.+.++||++||.++..+.++...|++||++++++
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  157 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence            999999753 3456677899999999999999999999999999887789999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      ++.++.++.+.||++|+|+||++.|+............ ....   ......+.+|+|+|++++++++....+.+|+.
T Consensus       158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG-KAEK---TYQNTVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             HHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHH-HHHh---hccccCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            99999999999999999999999855443211110100 1111   11122456999999999999986666555544

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-32  Score=286.16  Aligned_cols=246  Identities=26%  Similarity=0.365  Sum_probs=214.6

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+ ++|||||+||||++++++|+++|++|++++|+.++++...+++... .++.++.+|++++++++++++++.+.+ |+
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~-g~  498 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF-GG  498 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            44 9999999999999999999999999999999998888777776543 478899999999999999999999888 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|++|||||.....++.+.+.+.|+..+++|+.|++.+++++.+.|++++. |+||++||..+..+.++..+|++||+++
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~  578 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAE  578 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHH
Confidence            999999999988888888899999999999999999999999999988664 8999999999999889999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcc--cCCccccccCC-------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVI--RTSLSDAIRHD-------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v--~t~~~~~~~~~-------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++.++.++++.||+||+|+||.+  .|++.......       ....+..+.+....+.+++.+++|+|++++++++
T Consensus       579 ~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s  658 (681)
T PRK08324        579 LHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS  658 (681)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence            99999999999999999999999999  77765322100       0011122344566788899999999999999998


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      +....++|+.+.+|||...
T Consensus       659 ~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        659 GLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             ccccCCcCCEEEECCCchh
Confidence            7788899999999999653

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=262.26  Aligned_cols=240  Identities=23%  Similarity=0.206  Sum_probs=187.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++ +++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4555 9999999999999999999999999999999999988888887653  346889999999999999999999988


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------  153 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------  153 (367)
                      + +++|++|||||+... +..+.+.+.++.++++|+.|++.+++.++|.|++. .++||++||.++..+           
T Consensus        91 ~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         91 G-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             C-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccc
Confidence            8 899999999998654 33356788999999999999999999999999765 689999999987643           


Q ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhc-CCCC-CCCCHH
Q 035642          154 -APLTPLYGPYNGAMNQLTKHLECEQ--AKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSR-TPIC-RPGEPD  227 (367)
Q Consensus       154 -~~~~~~Y~asKaal~~l~~~la~e~--~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~-~p~~-~~~~~~  227 (367)
                       .++..+|++||+|+.+|++.++.++  .+.||+||+++||++.|++........ ........+... ...+ .+.+++
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence             2456789999999999999999864  456899999999999999875422110 000111111110 0011 245889


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEe
Q 035642          228 EVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                      +.|...++++.+... .+|..+..
T Consensus       248 ~ga~~~l~~a~~~~~-~~g~~~~~  270 (313)
T PRK05854        248 SAILPALYAATSPDA-EGGAFYGP  270 (313)
T ss_pred             HHHHHhhheeeCCCC-CCCcEECC
Confidence            999999988753322 24555543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=5.1e-33  Score=253.34  Aligned_cols=219  Identities=23%  Similarity=0.268  Sum_probs=183.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||++|||++++++|+++|  +.|++..|+....      .  .+.++.++++|+++.++++++.++    + +++
T Consensus         2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~~----~-~~i   68 (235)
T PRK09009          2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSEQ----F-TQL   68 (235)
T ss_pred             EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHHh----c-CCC
Confidence            69999999999999999999985  5677777765321      1  235788899999999998886543    4 789


Q ss_pred             cEEEEcCCCCCC------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc---CCCCCccH
Q 035642           90 NLLVNNAAVAVP------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT---AAPLTPLY  160 (367)
Q Consensus        90 D~lI~~Ag~~~~------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~---~~~~~~~Y  160 (367)
                      |++|||||....      .++.+.+.+.|+..+++|+.+++.+++.++|+|++++.++|+++||..+..   +.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            999999998742      345677889999999999999999999999999877778999999876543   24567799


Q ss_pred             HHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          161 GPYNGAMNQLTKHLECEQAK--DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~--~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++||+++++|+++++.|+++  .||+||+|+||+++|++....             ....|.+++.+|+|+|+.++++++
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~a~~~~~l~~  215 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-------------QQNVPKGKLFTPEYVAQCLLGIIA  215 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-------------hhccccCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999976  589999999999999986432             123466778899999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 035642          239 PAASYITGQVICVDGGMT  256 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~  256 (367)
                      +..++.+|+.+.+|||+.
T Consensus       216 ~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        216 NATPAQSGSFLAYDGETL  233 (235)
T ss_pred             cCChhhCCcEEeeCCcCC
Confidence            888899999999999986

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=5.3e-32  Score=248.02  Aligned_cols=239  Identities=30%  Similarity=0.425  Sum_probs=200.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||++++++|+++|++|++++|+ .+..+...+.+... +..+.++.+|++|.+++.++++++.+.+ ++
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   85 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF-GR   85 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            499999999999999999999999999999986 44455555555432 3468889999999999999999999888 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|++|||||.....++.+.+.++++.++++|+.|++++++++.+++.+. .+.+++++|..+..+.++...|++||++++
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~  164 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALE  164 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence            9999999998776666777889999999999999999999999998654 578999998888778888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      .++++++.++.+ ++++++++||+++||+......    ...........+..+.++++|+|+++.+++.+ ....+|+.
T Consensus       165 ~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~  238 (249)
T PRK09135        165 MLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFD----EEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQI  238 (249)
T ss_pred             HHHHHHHHHHCC-CCeEEEEEeccccCccccccCC----HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcE
Confidence            999999999866 7999999999999998543211    11233344556777888999999999888864 45679999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      +.+++|...
T Consensus       239 ~~i~~g~~~  247 (249)
T PRK09135        239 LAVDGGRSL  247 (249)
T ss_pred             EEECCCeec
Confidence            999999753

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=255.75  Aligned_cols=220  Identities=23%  Similarity=0.326  Sum_probs=187.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.+.        ..++.++.+|++|+++++++++.+.+.+ +++|
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~~d   75 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GRID   75 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CCCC
Confidence            489999999999999999999999999999998765432        2357789999999999999999999998 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||+....++.+.+.+++++++++|+.|+++++++++|+|++++.|+||++||..+..+.+....|++||++++++
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999999877778888999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-h---hHHHHHH--hhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-K---NKIVEGL--VSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~---~~~~~~~--~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++.|++++||++++|+||++.|++......... .   .......  ....+..+..+|+++|+.++++++.
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  230 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALG  230 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcC
Confidence            999999999999999999999999998754322110 0   0000000  0112455678999999999999954

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-33  Score=253.73  Aligned_cols=234  Identities=23%  Similarity=0.244  Sum_probs=189.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||+||||++++++|+++|++|++++|+.+ ..+.+.++++..+.++.++.+|++++++++++++++.+.+ +++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   85 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF-GGL   85 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            39999999999999999999999999999999753 4555666666556678899999999999999999998888 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-----cCCCCCccHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-----TAAPLTPLYGPYN  164 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-----~~~~~~~~Y~asK  164 (367)
                      |++|||||......      ..++..+++|+.+++++++++.++|.+  .++||++||..+.     .+.+.+..|++||
T Consensus        86 d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK  157 (248)
T PRK07806         86 DALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSK  157 (248)
T ss_pred             cEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHH
Confidence            99999998643211      124567899999999999999999853  4799999996553     2234467899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.++++.||+||+|+||++.|++......... +....  ....|.+++++|+|+|++++++++  +.++
T Consensus       158 ~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~~~~  232 (248)
T PRK07806        158 RAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLN-PGAIE--ARREAAGKLYTVSEFAAEVARAVT--APVP  232 (248)
T ss_pred             HHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCC-HHHHH--HHHhhhcccCCHHHHHHHHHHHhh--cccc
Confidence            999999999999999999999999999999987543221111 11111  123577899999999999999995  6688


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      +|+.+.++||....
T Consensus       233 ~g~~~~i~~~~~~~  246 (248)
T PRK07806        233 SGHIEYVGGADYFL  246 (248)
T ss_pred             CccEEEecCcccee
Confidence            99999999997653

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=252.79  Aligned_cols=218  Identities=25%  Similarity=0.305  Sum_probs=190.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||+||||++++++|+++|++|++++|+.+++++..+++ ..+.++.++.+|++|++++.++++.+.+ + 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~-   78 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M-   78 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-
Confidence            4455 9999999999999999999999999999999998888877777 3456788999999999999999998876 6 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....++.+.+.+++++++++|+.|++++++.++++|.+++.++||++||..+..+.++...|+++|++
T Consensus        79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            89999999999877677778899999999999999999999999999988777999999999999898999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +.+++++++.++.+.||+|++++||+++|++.......         ... ....+..+|+|+|+.+++++.
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~---------~~~-~~~~~~~~~~~va~~i~~~~~  220 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA---------LNR-ALGNAMDDPEDVAAAVLQAIE  220 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc---------ccc-cccCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999875432110         000 112356799999999999994

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-32  Score=247.18  Aligned_cols=216  Identities=24%  Similarity=0.330  Sum_probs=191.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++++++.++++++.+++ +++|
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   86 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-GSID   86 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCcc
Confidence            499999999999999999999999999999999988888777776666788899999999999999999999888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||......+.+.+.++|++.+++|+.+++++++++.++|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  166 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGL  166 (239)
T ss_pred             EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999998766667778899999999999999999999999999888889999999999999988899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +++++.|+.+.||++++|+||++.|++.......           ... ...+.+++|+|+.++.+++.
T Consensus       167 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~~~-~~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        167 TESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-----------DGN-PDKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             HHHHHHHhhccCcEEEEEecCcccCcchhhcccc-----------ccC-CCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999976432111           011 23457899999999999854

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=5.5e-32  Score=248.81  Aligned_cols=240  Identities=36%  Similarity=0.510  Sum_probs=199.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHHHHhcC-CcEEEEEccCCC-HHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE--LNERLQEWKLKG-LKVTGSVCDLSS-REQREKLMETVSS   83 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~--~~~~~~~l~~~~-~~~~~~~~Dlsd-~~sv~~~~~~~~~   83 (367)
                      +.+ +++||||++|||+++|+.|+++|++|+++.|+.+.  .+...+.....+ ..+.+..+|+++ .++++.+++.+.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            344 99999999999999999999999998888887654  344443333122 367888899998 9999999999999


Q ss_pred             HcCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHH
Q 035642           84 IFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYG  161 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~  161 (367)
                      .+ |++|++|||||+... .++.+.+.++|++++++|+.|++.+++.+.|+++++   +||++||..+. +.+.. .+|+
T Consensus        83 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~  157 (251)
T COG1028          83 EF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYA  157 (251)
T ss_pred             Hc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHH
Confidence            98 899999999999877 488888999999999999999999999888888733   99999999999 77774 9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC-
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA-  240 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~-  240 (367)
                      +||+|+.+|++.++.|++++||++|+|+||++.|++........ .. .........+..+.+.|++++..+.|+.+.. 
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-LE-ALKRLAARIPLGRLGTPEEVAAAVAFLASDEA  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-hh-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcch
Confidence            99999999999999999999999999999999999887544332 00 0112222226668899999999999988664 


Q ss_pred             CCCccccEEEeCCCc
Q 035642          241 ASYITGQVICVDGGM  255 (367)
Q Consensus       241 ~~~itG~~i~vdgG~  255 (367)
                      ..+.+|+.+.+|||.
T Consensus       236 ~~~~~g~~~~~~~~~  250 (251)
T COG1028         236 ASYITGQTLPVDGGL  250 (251)
T ss_pred             hccccCCEEEeCCCC
Confidence            678899999999886

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-32  Score=252.25  Aligned_cols=240  Identities=18%  Similarity=0.280  Sum_probs=196.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||+||||++++++|+++|++|++++|+.+..+.+.+..   +.++.++.+|++|.++++++++++.+.+ +++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            358999999999999999999999999999999987766655443   3468899999999999999999988888 889


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||.....+..+.+.+.+++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            99999999987777777889999999999999999999999999988878999999999988888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-------AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ++++++.++.++||+++.++||.+.|++........       .............+....++++|++++++..+...  
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~--  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT--  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC--
Confidence            999999999989999999999999998754332110       00001111122223333579999999999988422  


Q ss_pred             CccccEEEeCCCcc
Q 035642          243 YITGQVICVDGGMT  256 (367)
Q Consensus       243 ~itG~~i~vdgG~~  256 (367)
                       ..+..+++.+|..
T Consensus       236 -~~~~~~~~g~~~~  248 (276)
T PRK06482        236 -PAPRRLTLGSDAY  248 (276)
T ss_pred             -CCCeEEecChHHH
Confidence             2355666666543

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=260.33  Aligned_cols=241  Identities=22%  Similarity=0.184  Sum_probs=189.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++ +++||||+||||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            4455 9999999999999999999999999999999998887777766542  456889999999999999999999998


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------  152 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------  152 (367)
                      + +++|+||||||.....  ...+.+.++..+++|+.|++.+++.+++.|++.+.++||++||.++..            
T Consensus        93 ~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  169 (306)
T PRK06197         93 Y-PRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWE  169 (306)
T ss_pred             C-CCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcc
Confidence            8 8999999999986443  235667889999999999999999999999887778999999987543            


Q ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEE--ecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHH
Q 035642          153 -AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI--APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEV  229 (367)
Q Consensus       153 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  229 (367)
                       +.++..+|++||++++++++.++.++++.|++++++  +||++.|++.......  .......+   .|. ...++++-
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~---~~~-~~~~~~~g  243 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVL---APL-LAQSPEMG  243 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHH---Hhh-hcCCHHHH
Confidence             223456899999999999999999998888777665  6999999987654221  11111111   111 12467777


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          230 SSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       230 A~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +...++++. .....+|..+..||+....
T Consensus       244 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~  271 (306)
T PRK06197        244 ALPTLRAAT-DPAVRGGQYYGPDGFGEQR  271 (306)
T ss_pred             HHHHHHHhc-CCCcCCCeEEccCcccccC
Confidence            777777664 3345688888877766443

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-32  Score=251.62  Aligned_cols=212  Identities=19%  Similarity=0.230  Sum_probs=179.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhH-HHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTE-LNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~-~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .++++||||++|||+++|++|+++| ++|++++|+.++ ++++.+++...+. ++.++.+|++|++++.++++++.+ + 
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~-   85 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G-   85 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c-
Confidence            3489999999999999999999995 899999999886 7777777766543 788999999999999999998876 5 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||+|..........+.+...+++++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+|
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa  165 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG  165 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence            78999999999864322111244556678999999999999999999998888999999999988888888899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +.+|+++++.|+.++||+|++|+||+++|++......              .  ....+|+|+|+.++..+.+
T Consensus       166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~--------------~--~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE--------------A--PLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC--------------C--CCCCCHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999997653211              0  1235899999999998843

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-32  Score=236.07  Aligned_cols=185  Identities=25%  Similarity=0.396  Sum_probs=170.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |.+.| ++|||||++|||+++|++|.+.|.+|++++|++++++++.++.    ..+....||+.|.++.+++++.+++.|
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            34567 9999999999999999999999999999999999998887764    467888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCcc--CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~--~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                       ..++++|||||+...-.+.  +...++.+..+.+|+.+++.++++++|++.+++.+.||++||..++.+....+.||++
T Consensus        77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence             8899999999998665443  3456778889999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTS  196 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~  196 (367)
                      |+|+..|+.+|+..++..+|.|.-+.|..|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999988999999999999997

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-32  Score=249.57  Aligned_cols=218  Identities=22%  Similarity=0.265  Sum_probs=188.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI-FQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~-~~g~i   89 (367)
                      +++||||||||||++++++|+++|++|++++|+.++++++.+.+.  +.++.++.+|+++.+++.++++.+.++ + +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG-GRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCC
Confidence            479999999999999999999999999999999988877766654  457889999999999999999988776 5 789


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||......+.+.+.++++.++++|+.+++++++++.++|+..+.++||++||..+..+.++...|++||+++++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            99999999987777788899999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++++.++.++||++++|+||++.|++.......     .......  ..+...+|+|+|++++.++.
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-----~~~~~~~--~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE-----VDAGSTK--RLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccch-----hhhhhHh--hccCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999986541111     0111111  12334689999999999983

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.6e-31  Score=255.31  Aligned_cols=236  Identities=19%  Similarity=0.119  Sum_probs=183.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~iD   85 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG-KPLD   85 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-CCcc
Confidence            399999999999999999999999999999999998888888775445678899999999999999999987766 7899


Q ss_pred             EEEEcCCCCCCC-CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC--CEEEEecCcccccC--------------
Q 035642           91 LLVNNAAVAVPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN--GIIVFISSVAGVTA--------------  153 (367)
Q Consensus        91 ~lI~~Ag~~~~~-~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~--g~IV~iSS~~~~~~--------------  153 (367)
                      +||||||+.... ...+.+.++++.++++|+.|+++++++++|+|++++.  +|||++||.++..+              
T Consensus        86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~  165 (322)
T PRK07453         86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL  165 (322)
T ss_pred             EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence            999999986432 2345688999999999999999999999999987653  69999999765320              


Q ss_pred             ---------------------CCCCccHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-cCCccccccCChhhhHH
Q 035642          154 ---------------------APLTPLYGPYNGAMNQLTKHLECEQA-KDNIRANSIAPGVI-RTSLSDAIRHDPAKNKI  210 (367)
Q Consensus       154 ---------------------~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~I~PG~v-~t~~~~~~~~~~~~~~~  210 (367)
                                           ..+..+|+.||.+.+.+++.+++++. ..||++++++||+| .|++.+.......  ..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~--~~  243 (322)
T PRK07453        166 GDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ--KL  243 (322)
T ss_pred             hhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH--HH
Confidence                                 12346899999999999999999985 46899999999999 5887654321100  01


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          211 VEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       211 ~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      ...+ .........+++..++.+++++.+.....+|..+.
T Consensus       244 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        244 FPWF-QKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHH-HHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            1111 11112234577888888888875544334555543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=244.47  Aligned_cols=212  Identities=23%  Similarity=0.318  Sum_probs=187.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++++||||+||||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|+++++++.++++++.+.+ +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            358999999999999999999999999999999998888877776543  5578899999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC-CccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL-TPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~-~~~Y~asKaa  166 (367)
                      ++|++|||||+....++.+.+.+.+++.+++|+.+++++++++++.|++.+.++||++||..+..+.++ ..+|++||++
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999998777777778899999999999999999999999998877899999999998888775 6889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++.+++.++.++...|+++++|+||+++|++......                .....++++.|+.++..+.
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS----------------TPFMVDTETGVKALVKAIE  216 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc----------------CCccCCHHHHHHHHHHHHh
Confidence            9999999999999889999999999999997653221                1134589999999998884

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=2e-31  Score=232.27  Aligned_cols=247  Identities=28%  Similarity=0.348  Sum_probs=217.3

Q ss_pred             CCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .++| ++||+|-.  ..|+..||+.|.++|+++..+..++ ++++..+++.+.-+...+++||+++.++++++++++.++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            3566 99999954  7999999999999999999998886 566655555544334667899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           85 FQGKLNLLVNNAAVAV----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      + |++|.|||+-|...    .+.+.+++.|.|...+++..++...+.+++.|.|..  +|+||.++-..+....|++..-
T Consensus        82 ~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvM  158 (259)
T COG0623          82 W-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVM  158 (259)
T ss_pred             h-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchh
Confidence            9 99999999999875    357778899999999999999999999999999954  6899999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +.+|+++|+-+|.||.+++++|||||+|+-|++.|=-...+..   ....+.......|++|..++|||++..+||+|+-
T Consensus       159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~---f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdL  235 (259)
T COG0623         159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD---FRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc---HHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcch
Confidence            9999999999999999999999999999999999865544433   2336777788899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccccCCC
Q 035642          241 ASYITGQVICVDGGMTVNGFN  261 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~~~~  261 (367)
                      ++-+||+++.||+|+++....
T Consensus       236 ssgiTGei~yVD~G~~i~~m~  256 (259)
T COG0623         236 SSGITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             hcccccceEEEcCCceeeccC
Confidence            999999999999999987654

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-31  Score=244.66  Aligned_cols=222  Identities=27%  Similarity=0.334  Sum_probs=191.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|++|+++++++++.+.+++ +++|
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   80 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGID   80 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            479999999999999999999999999999999888887777776667788899999999999999999999888 8899


Q ss_pred             EEEEcCCCCCCCCccCC-CHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDT-TAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~-~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      ++|||||......+.+. +.+.+++.+++|+.+++++++.+.++|.+. .++||++||..+..+.++...|+++|+++++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            99999998877777777 889999999999999999999999998655 5899999999999888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++++.++.+.|+++++++||++.|++..........  ...  .......++.+|+|+|+++.++++
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK--PLG--KSPMQESKIMSAEECAEAILPAIA  224 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc--ccc--cccccccCCCCHHHHHHHHHHHhh
Confidence            99999999998999999999999999986543221110  000  000112367899999999999995

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=237.43  Aligned_cols=197  Identities=22%  Similarity=0.234  Sum_probs=171.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||++|||++++++|+++ ++|++++|+..                 .+.||++|+++++++++++     +++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCCE
Confidence            6999999999999999999999 99999999753                 3678999999999988753     78999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      +|||||.....++.+.+.++|++.+++|+.+++++++++.|+|++  .|+|+++||..+..+.++..+|++||+++++|+
T Consensus        59 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  136 (199)
T PRK07578         59 VVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFV  136 (199)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence            999999877677778899999999999999999999999999964  489999999999988899999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                      ++++.|+ ++||+||+|+||++.|++....              ...+..+..+|+|+|+.++++++   ...+|+.+.+
T Consensus       137 ~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--------------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~~  198 (199)
T PRK07578        137 KAAALEL-PRGIRINVVSPTVLTESLEKYG--------------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYKV  198 (199)
T ss_pred             HHHHHHc-cCCeEEEEEcCCcccCchhhhh--------------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEecc
Confidence            9999999 8899999999999999863210              11233456799999999999884   3578988875

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=244.17  Aligned_cols=223  Identities=21%  Similarity=0.266  Sum_probs=182.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-HHHHcC--CC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET-VSSIFQ--GK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~-~~~~~~--g~   88 (367)
                      ++|||||+||||++++++|+++|++|++++|+.++.  .   ....+.++.++.+|+++.+++++++++ +.+.++  ++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            699999999999999999999999999999986542  1   122355788999999999999998876 554441  37


Q ss_pred             ccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|++|||||.... .++.+.+.+.+++.+++|+.|++.+++.+.+.|.+++.++||++||.++..+.+++..|+++|+++
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAAL  157 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHH
Confidence            9999999998654 456677899999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhcCCCCCCCCHHHHHH-HHHHHhCCC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSRTPICRPGEPDEVSS-LVAFLCFPA  240 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~-ai~~L~s~~  240 (367)
                      +++++.++.+ .+.||++++|+||+++|++........ ........+....|.++..+|+|+|. .+.+|.++.
T Consensus       158 ~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        158 DHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            9999999999 778999999999999999865332111 00112233445567788999999999 566777654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-31  Score=252.44  Aligned_cols=222  Identities=26%  Similarity=0.285  Sum_probs=186.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++.+ +++||||++|||+++|++|+.+|++|++++|+.++++++.+.+...  ..++.++++|+++.+++.++++++.+
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            45667 9999999999999999999999999999999999999999999863  55788899999999999999999998


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------  153 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------  153 (367)
                      .+ +++|++|||||++....  ..+.|.++..+.+|+.|++.+++.++|.|+.+..+|||++||..+...          
T Consensus       111 ~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~  187 (314)
T KOG1208|consen  111 KE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEK  187 (314)
T ss_pred             cC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchh
Confidence            88 89999999999987654  557789999999999999999999999999887799999999886110          


Q ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHH
Q 035642          154 ---APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS  230 (367)
Q Consensus       154 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  230 (367)
                         +....+|+.||.++..+++.|++.+.+ ||.+++++||.+.|+.....  . .   ....+........+-+++.-|
T Consensus       188 ~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~--~-~---~~~~l~~~l~~~~~ks~~~ga  260 (314)
T KOG1208|consen  188 AKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV--N-L---LLRLLAKKLSWPLTKSPEQGA  260 (314)
T ss_pred             ccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc--h-H---HHHHHHHHHHHHhccCHHHHh
Confidence               223346999999999999999999988 99999999999999944331  1 1   222233333333335889999


Q ss_pred             HHHHHHhC
Q 035642          231 SLVAFLCF  238 (367)
Q Consensus       231 ~ai~~L~s  238 (367)
                      +..++++.
T Consensus       261 ~t~~~~a~  268 (314)
T KOG1208|consen  261 ATTCYAAL  268 (314)
T ss_pred             hheehhcc
Confidence            99999873

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-31  Score=240.29  Aligned_cols=210  Identities=20%  Similarity=0.286  Sum_probs=184.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.+...+++... +.++.++.+|++++++++++++++.+    ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence            37999999999999999999999999999999998887777766543 45789999999999999999987753    47


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |++|||||........+.+.+++.+.+++|+.+++++++++.|+|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            99999999877667777889999999999999999999999999988888999999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++++++.|+.+.||++++|+||+++|++.....               .|.....+|+++|+.++.+++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK---------------LPGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC---------------CCccccCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998654321               1333467899999999998853

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-30  Score=236.34  Aligned_cols=233  Identities=21%  Similarity=0.258  Sum_probs=194.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.+ +++||||+||||.++++.|+++|++|++++|+.++.+.+.+.+... .++.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            3445 9999999999999999999999999999999998887766666543 368889999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~~~~~Y~asKa  165 (367)
                      +++|.+|+++|.....+..  +.+.++.++++|+.+++.+.+.++|++++  .+++|++||..+.. +.+....|++||+
T Consensus        80 ~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            7899999999976544433  34889999999999999999999999854  48999999987743 5567788999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++.++++++.++.+.||++++|+||+++|++....        ....   ..+. ....+++|+|+++++++++....+
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~--------~~~~---~~~~~~~~~~~~~va~~~~~~~~~~~~~~  224 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER--------NWKK---LRKLGDDMAPPEDFAKVIIWLLTDEADWV  224 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh--------hhhh---hccccCCCCCHHHHHHHHHHHhcccccCc
Confidence            999999999999988899999999999999864210        0111   1111 245789999999999999888889


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||..+
T Consensus       225 ~g~~~~~~~~~~~  237 (238)
T PRK05786        225 DGVVIPVDGGARL  237 (238)
T ss_pred             cCCEEEECCcccc
Confidence            9999999998754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=243.64  Aligned_cols=220  Identities=23%  Similarity=0.327  Sum_probs=181.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++.+...+    .  .+.++.+|++++++++++++.+.+.+ +++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A--GFTAVQLDVNDGAALARLAEELEAEH-GGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            489999999999999999999999999999999876654322    1  35678899999999999999998888 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++|||||.....++.+.+.+++++.+++|+.|+++++++++|+|++. .|+||++||.++..+.+....|++||++++.+
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999998777777888999999999999999999999999999654 58999999999998888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChh--------hhHHHHHHhh--cCCCCCCCCHHHHHHHHHHHhC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA--------KNKIVEGLVS--RTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++.|++++||+|++|+||+++|++.........        .....+.+..  ........+|+++|+.++..+.
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~  231 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQ  231 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999998764321100        0001111111  1111234589999999998874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.9e-30  Score=233.69  Aligned_cols=219  Identities=26%  Similarity=0.344  Sum_probs=189.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+|+||++++++|+++|++|++++|+++++++..+++... .++.++.+|+++.+++.++++++.+.+ +++|
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   84 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-GGLD   84 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            49999999999999999999999999999999998888877777543 578899999999999999999999888 7999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++||+||.....++.+.+.+.+++.+++|+.+++++++++++.|. ++.++||++||.++..+..+...|+++|++++++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~  163 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF  163 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            999999988777777889999999999999999999999999984 4468999999999888888888999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.++.++...|+++++|+||++.|++........              .....+++|+|+.++++++.....+.+
T Consensus       164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~--------------~~~~~~~~d~a~~~~~~l~~~~~~~~~  225 (237)
T PRK07326        164 SEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK--------------DAWKIQPEDIAQLVLDLLKMPPRTLPS  225 (237)
T ss_pred             HHHHHHHhcccCcEEEEEeeccccCcccccccchh--------------hhccCCHHHHHHHHHHHHhCCcccccc
Confidence            99999999988999999999999998754321110              011258999999999999766554444

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-30  Score=235.06  Aligned_cols=203  Identities=20%  Similarity=0.242  Sum_probs=172.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++++++.+.    +.++.++.||++|+++++++++++.    ..+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence            4799999999999999999999999999999998776655432    3467889999999999999988763    3479


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      .+|||||.....+..+.+.++|++++++|+.|++++++++.|+|.+  +++||++||.++..+.++...|++||++++++
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            9999999754444445688999999999999999999999999854  47899999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++.|++++||++++++||++.|++......               ......+|+++|+.++..+.
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~---------------~~~~~~~~~~~a~~i~~~i~  204 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF---------------AMPMIITVEQASQEIRAQLA  204 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC---------------CCCcccCHHHHHHHHHHHHh
Confidence            999999999999999999999999997543210               11123589999999988774

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=268.43  Aligned_cols=215  Identities=22%  Similarity=0.288  Sum_probs=188.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +++|||||||||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g  447 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH-G  447 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            445 99999999999999999999999999999999999888888887667789999999999999999999999998 8


Q ss_pred             CccEEEEcCCCCCCCCccCC--CHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDT--TAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~--~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      ++|++|||||......+.+.  +.+++++++++|+.|+++++++++|+|++++.|+||++||.++..+.++.+.|++||+
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  527 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKA  527 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHH
Confidence            99999999998654443332  2578999999999999999999999998888899999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++++++++.|++++||+||+|+||+++|++......              .......+|+++|+.++..+.
T Consensus       528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~--------------~~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR--------------YNNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc--------------ccCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998653210              011234689999999998774

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.97  E-value=6.4e-30  Score=222.67  Aligned_cols=223  Identities=26%  Similarity=0.307  Sum_probs=178.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCEE-EEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF-GAII-HTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-G   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~-G~~V-i~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g   87 (367)
                      +.++||||++|||..++++|++. |..+ +.++|+.+++.+..+.......+++.+++|+++.++++++++++.+.-+ .
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            36999999999999999999964 6655 4567778876444444444577999999999999999999999988731 4


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-----------CEEEEecCcccccC--
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-----------GIIVFISSVAGVTA--  153 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-----------g~IV~iSS~~~~~~--  153 (367)
                      .+|++|||||+... ....+.+.+.|-+.+++|..|++.++|+++|++++...           +.|||+||.++..+  
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~  163 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF  163 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence            79999999999754 45556678899999999999999999999999986532           48999999887653  


Q ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHH
Q 035642          154 -APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSL  232 (367)
Q Consensus       154 -~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~a  232 (367)
                       ..++.+|..||+|+++|+|+++.|+++.+|-|.++|||||.|+|....                    ...+||+-+..
T Consensus       164 ~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~--------------------a~ltveeSts~  223 (249)
T KOG1611|consen  164 RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK--------------------AALTVEESTSK  223 (249)
T ss_pred             CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC--------------------cccchhhhHHH
Confidence             345689999999999999999999999999999999999999997621                    12266777777


Q ss_pred             HHHHhCCCCCCccccEEEeCC
Q 035642          233 VAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~vdg  253 (367)
                      ++.-+..-...-+|..+.-||
T Consensus       224 l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  224 LLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHHhcCcccCcceEccCC
Confidence            766665555555676666554

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.3e-31  Score=226.74  Aligned_cols=189  Identities=24%  Similarity=0.313  Sum_probs=169.9

Q ss_pred             CCCCCCCeEEEEcCC-ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQNYFITGGT-RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~~vLVTGas-~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..++..+.|+|||+| ||||.+++++|+++|+.|+.++|+.+...++..+.     .+....+|+++++++..+..++.+
T Consensus         2 e~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~   76 (289)
T KOG1209|consen    2 ELQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRA   76 (289)
T ss_pred             CcccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhh
Confidence            345566788888865 89999999999999999999999988877765543     477889999999999999999988


Q ss_pred             -HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           84 -IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 -~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                       .+ |++|+++||||..-..+..|.+.+..++.|++|++|.+++++++...+. +..|.|||++|.++..+.|..+.|++
T Consensus        77 ~~~-Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~li-kaKGtIVnvgSl~~~vpfpf~~iYsA  154 (289)
T KOG1209|consen   77 NPD-GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLI-KAKGTIVNVGSLAGVVPFPFGSIYSA  154 (289)
T ss_pred             CCC-CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHH-HccceEEEecceeEEeccchhhhhhH
Confidence             55 8999999999998778889999999999999999999999999985554 44699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccc
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDA  200 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~  200 (367)
                      ||+|+.++++.|+.|+++.||+|..+-||.|.|.+...
T Consensus       155 sKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  155 SKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999999999988765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-29  Score=231.99  Aligned_cols=220  Identities=22%  Similarity=0.305  Sum_probs=181.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+.++++.+.....+.++.++.+|++|++++.++++       +++|
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~id   75 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDVD   75 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCCC
Confidence            489999999999999999999999999999999887777766666556678899999999998877653       5799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||.....+..+.+.+.++..+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...|++||++++++
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~  155 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAI  155 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999887779999999999988888889999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++.++.++.+.||++++|+||++.|++........     .............|. ...+++|+++.++.++.
T Consensus       156 ~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        156 AEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             HHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhc
Confidence            99999999888999999999999998754321110     000011111111222 23689999888887763

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-30  Score=237.44  Aligned_cols=205  Identities=24%  Similarity=0.327  Sum_probs=168.9

Q ss_pred             HHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCcc
Q 035642           26 IVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL  105 (367)
Q Consensus        26 ia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~  105 (367)
                      +|++|+++|++|++++|+.++.+.           ..++.+|++|.++++++++++.    +++|+||||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence            478999999999999999765421           2357899999999999998763    679999999997532    


Q ss_pred             CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc---------------------------CCCCCc
Q 035642          106 DTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT---------------------------AAPLTP  158 (367)
Q Consensus       106 ~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~---------------------------~~~~~~  158 (367)
                          +.+++++++|+.+++++++.++|+|.+  .|+||++||.++..                           +.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                247899999999999999999999854  48999999998863                           456778


Q ss_pred             cHHHHHHHHHHHHHHHH-HHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          159 LYGPYNGAMNQLTKHLE-CEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la-~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .|++||+|++++++.++ .|++++||+||+|+||++.|++......... .....  ....|.+++.+|+|+|++++||+
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~-~~~~~--~~~~~~~~~~~pe~va~~~~~l~  212 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG-QERVD--SDAKRMGRPATADEQAAVLVFLC  212 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh-hHhhh--hcccccCCCCCHHHHHHHHHHHc
Confidence            99999999999999999 9999999999999999999998754322111 01111  12457889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++.+.+++|+.+.+|||+...
T Consensus       213 s~~~~~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        213 SDAARWINGVNLPVDGGLAAT  233 (241)
T ss_pred             ChhhcCccCcEEEecCchHHH
Confidence            988899999999999997543

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=6.3e-29  Score=229.00  Aligned_cols=222  Identities=24%  Similarity=0.299  Sum_probs=183.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||+++++.|+++|++|++++|+.++.+.+.+    .  .+..+.+|++|.+++.++++++.+..++++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            589999999999999999999999999999999877654422    1  3667889999999999999988765436799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      .+|||||.....+..+.+.+.+++.+++|+.|++++++.+++.|++.+.++||++||..+..+.++...|++||++++.+
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            99999998766677788999999999999999999999999999888789999999999998888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +++++.++.+.|+++++++||++.|++................   ......+.+|+|+|+++..+++...
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENP---GIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhh---HHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            9999999998999999999999999876543221110000000   0001234789999999999985443

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=9.8e-29  Score=225.39  Aligned_cols=200  Identities=25%  Similarity=0.335  Sum_probs=174.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++||||+||||++++++|+++|+ +|++++|+.+++++       .+.++.++.+|++|.++++++++..     
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~-----   71 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA-----   71 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc-----
Confidence            444 999999999999999999999999 99999999876543       2457889999999999998887653     


Q ss_pred             CCccEEEEcCCC-CCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~-~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|++||+||. ....++.+.+.+++++.+++|+.+++.+++++.+.+++.+.++||++||..+..+.++...|+++|+
T Consensus        72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  151 (238)
T PRK08264         72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKA  151 (238)
T ss_pred             CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence            689999999998 5556677789999999999999999999999999998777899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++++.++.++.+.|++++++.||.++|++......                  ...+++++|+.++..+.
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~------------------~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA------------------PKASPADVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc------------------CCCCHHHHHHHHHHHHh
Confidence            99999999999999889999999999999987542211                  13578899999888774

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.4e-29  Score=216.85  Aligned_cols=163  Identities=36%  Similarity=0.486  Sum_probs=153.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN--QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~--~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      |+++||||++|||++++++|+++|+ .|++++|+  .+..+++.+++...+.++.++++|++++++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            4799999999999999999999966 78899999  778888888888778899999999999999999999999888 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|++|||||.....++.+.+.+.|++++++|+.+++.+.++++|    ++.|+||++||.++..+.+++.+|++||+|+
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            999999999999888888999999999999999999999999999    3479999999999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 035642          168 NQLTKHLECEQ  178 (367)
Q Consensus       168 ~~l~~~la~e~  178 (367)
                      ++|+++++.|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=9.8e-29  Score=225.82  Aligned_cols=185  Identities=23%  Similarity=0.241  Sum_probs=168.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~iD   90 (367)
                      .|+|||+.+|.|+.+|++|.++|++|+..+-+++.++.+..+..  .++...++.|++++++++++.+.+.++.+ .++-
T Consensus        31 ~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLw  108 (322)
T KOG1610|consen   31 AVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLW  108 (322)
T ss_pred             EEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccccce
Confidence            89999999999999999999999999999988888888777764  56788889999999999999998888763 2599


Q ss_pred             EEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      .||||||+.. .++.+-.+.++++.++++|+.|++.++++++|.+++. .|||||+||..|..+.|...+|++||+|++.
T Consensus       109 glVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVea  187 (322)
T KOG1610|consen  109 GLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVEA  187 (322)
T ss_pred             eEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHHH
Confidence            9999999763 4555567899999999999999999999999999776 6999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccc
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSD  199 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~  199 (367)
                      |+-++++|+.+.||+|..|-||+..|++..
T Consensus       188 f~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  188 FSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999875

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=220.58  Aligned_cols=180  Identities=23%  Similarity=0.356  Sum_probs=154.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.+++.+ +    .++.++.+|++|+++++++++++.+   +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            479999999999999999999999999999999876554322 1    2567788999999999999988753   5799


Q ss_pred             EEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---CCCccHHHHHH
Q 035642           91 LLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---PLTPLYGPYNG  165 (367)
Q Consensus        91 ~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---~~~~~Y~asKa  165 (367)
                      ++|||||....  .++.+.+.+++++.+++|+.+++.+++++++++++. .++|+++||..+..+.   .++..|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence            99999998643  355677889999999999999999999999998643 5899999998776543   35678999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD  199 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~  199 (367)
                      +++.+++.++.|++++||++|+|+||+++|++..
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            9999999999999999999999999999999854

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=3.2e-29  Score=228.90  Aligned_cols=208  Identities=25%  Similarity=0.322  Sum_probs=180.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHH-HHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ-REKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~   88 (367)
                      +.++|||||.|||++.|++||++|.+|++++|++++++.+++++... +.++.++.+|.++.+. .+++.+.+..   ..
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~---~~  126 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG---LD  126 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC---Cc
Confidence            38999999999999999999999999999999999999999999764 5678899999999887 3334443332   46


Q ss_pred             ccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           89 LNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        89 iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |.+||||+|...  +..+.+.+.+.+++.+.+|..++..+++.++|.|.+++.|-|||+||.++..+.|.++.|++||+.
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~  206 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAF  206 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHH
Confidence            899999999986  667888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ++.|+++|+.|+..+||.|-++.|.+|.|+|......                .-...+|+..|+..+.-.
T Consensus       207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~----------------sl~~ps~~tfaksal~ti  261 (312)
T KOG1014|consen  207 VDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP----------------SLFVPSPETFAKSALNTI  261 (312)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCC----------------CCcCcCHHHHHHHHHhhc
Confidence            9999999999999999999999999999998754321                122346777777766544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=4.5e-28  Score=220.99  Aligned_cols=221  Identities=22%  Similarity=0.206  Sum_probs=192.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +.++|||||+|||+++|..+..+|++|.++.|+.+++.++.++++-.  -.++.+..+|+.|.+++..+++++.+.+ +.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence            38999999999999999999999999999999999999999988643  2237789999999999999999999888 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|.++||||...++-+.+.+.+.++..+++|+.|+++++++.++.|++.. .|+|+.+||.++..+..++++|+++|+|+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999999999999999999999999999999999999999998776 67999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .+++..+++|+.++||+|....|+.+.||........  .++....+...   .....+|++|.+++.=+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t--kP~~t~ii~g~---ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT--KPEETKIIEGG---SSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc--CchheeeecCC---CCCcCHHHHHHHHHhHH
Confidence            9999999999999999999999999999976543221  11121111111   12357899999987644

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-27  Score=212.70  Aligned_cols=212  Identities=20%  Similarity=0.248  Sum_probs=173.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||++++++|+++|++|++++|+.++.+++..    .  .+.++.+|+++.++++++++++..   +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L--GAEALALDVADPASVAGLAWKLDG---EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence            379999999999999999999999999999999876654332    2  345789999999999998876632   4799


Q ss_pred             EEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC---ccHHHHHH
Q 035642           91 LLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT---PLYGPYNG  165 (367)
Q Consensus        91 ~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~---~~Y~asKa  165 (367)
                      ++|||||....  ....+.+.++|++.+++|+.+++++++++.|+|.+. .|+++++||..+..+....   ..|+++|+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA  151 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence            99999998632  345566899999999999999999999999998654 6899999998876654332   35999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++++++.++.++.  ++++|+|+||+++|++....                    ....+++.+..+..++.......+
T Consensus       152 a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~  209 (222)
T PRK06953        152 ALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ--------------------AALDPAQSVAGMRRVIAQATRRDN  209 (222)
T ss_pred             HHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC--------------------CCCCHHHHHHHHHHHHHhcCcccC
Confidence            99999999998863  79999999999999985421                    123678889888887766666778


Q ss_pred             ccEEEeCCC
Q 035642          246 GQVICVDGG  254 (367)
Q Consensus       246 G~~i~vdgG  254 (367)
                      |..+..|++
T Consensus       210 ~~~~~~~~~  218 (222)
T PRK06953        210 GRFFQYDGV  218 (222)
T ss_pred             ceEEeeCCc
Confidence            888888765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-27  Score=216.81  Aligned_cols=197  Identities=17%  Similarity=0.132  Sum_probs=150.1

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |....+++ +++|||||||||++++++|+++|++|++++|+.....+.  .  ..+. ..++.+|++|.+++.+.     
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~--~~~~-~~~~~~D~~~~~~~~~~-----   76 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--N--DESP-NEWIKWECGKEESLDKQ-----   76 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--h--ccCC-CeEEEeeCCCHHHHHHh-----
Confidence            33445566 999999999999999999999999999999986322111  1  1122 25678999999887643     


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC---CCCEEEEecCcccccCCCCCcc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS---GNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~---~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                        + +++|++|||||....   .+.+.++|++++++|+.|+++++++++|+|+++   +++.+++.||.++..+ +...+
T Consensus        77 --~-~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~  149 (245)
T PRK12367         77 --L-ASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPS  149 (245)
T ss_pred             --c-CCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCch
Confidence              3 789999999997532   345789999999999999999999999999763   2334545566655544 45678


Q ss_pred             HHHHHHHHHHHH---HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLT---KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       160 Y~asKaal~~l~---~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      |++||+|+..+.   +.++.|+.+.|++|+.++||+++|++..                     ....+|+++|+.++++
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------~~~~~~~~vA~~i~~~  208 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------IGIMSADFVAKQILDQ  208 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------cCCCCHHHHHHHHHHH
Confidence            999999986543   5555566788999999999999988621                     0135899999999999


Q ss_pred             hC
Q 035642          237 CF  238 (367)
Q Consensus       237 ~s  238 (367)
                      ++
T Consensus       209 ~~  210 (245)
T PRK12367        209 AN  210 (245)
T ss_pred             Hh
Confidence            84

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.8e-27  Score=211.29  Aligned_cols=218  Identities=28%  Similarity=0.332  Sum_probs=178.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++ ++|++++|+.++.++..+..    ..+.++.+|++|+++++++++..     +++|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~id   73 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRLD   73 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCCC
Confidence            48999999999999999999999 99999999987765554332    24778899999999998888653     5799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ++||+||.....+..+.+.++|++++++|+.+++.+++.+++.+++. .+++|++||..+..+.++...|+.+|++++.+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            99999998766666777899999999999999999999999998765 58999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      ++.++.++... +++++|.||.+.|++........         ....+.+++.+++|+|++++++++...   +|.++.
T Consensus       153 ~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~  219 (227)
T PRK08219        153 ADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE---------GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITE  219 (227)
T ss_pred             HHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh---------ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccce
Confidence            99999988765 99999999999887644321110         112344567899999999999995432   444444


Q ss_pred             eC
Q 035642          251 VD  252 (367)
Q Consensus       251 vd  252 (367)
                      ++
T Consensus       220 ~~  221 (227)
T PRK08219        220 VV  221 (227)
T ss_pred             EE
Confidence            43

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=9.3e-29  Score=215.43  Aligned_cols=235  Identities=21%  Similarity=0.189  Sum_probs=187.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+||+|.|||..++..+.+++-.....+++...++ ........+........|++...-..++++..++++ ++.|
T Consensus         7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gkr~   84 (253)
T KOG1204|consen    7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GKRD   84 (253)
T ss_pred             eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Ccee
Confidence            48999999999999999999888865443333322222 111111223344455568888888889998888887 8999


Q ss_pred             EEEEcCCCCCCC-Cc--cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           91 LLVNNAAVAVPK-EA--LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        91 ~lI~~Ag~~~~~-~~--~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|||||...+- ..  ...+.+.|++.++.|+++.+.+.+.++|.+++.. .|.|||+||.++..+.++|++||.+|+|
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaA  164 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAA  164 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHH
Confidence            999999987652 22  2568899999999999999999999999998774 6999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC-Cc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS-YI  244 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~-~i  244 (367)
                      .++|.+.+|.|.. .++++.+++||.++|+|........ ..+.....+......+++.+|...|+.+.+|+  +.. +.
T Consensus       165 r~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~--e~~~f~  241 (253)
T KOG1204|consen  165 RNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLL--EKGDFV  241 (253)
T ss_pred             HHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHH--HhcCcc
Confidence            9999999999975 7999999999999999987665443 33445566666667788999999999999998  544 88


Q ss_pred             cccEEE
Q 035642          245 TGQVIC  250 (367)
Q Consensus       245 tG~~i~  250 (367)
                      +|+.+.
T Consensus       242 sG~~vd  247 (253)
T KOG1204|consen  242 SGQHVD  247 (253)
T ss_pred             cccccc
Confidence            998764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.95  E-value=8.7e-27  Score=216.78  Aligned_cols=248  Identities=14%  Similarity=0.092  Sum_probs=194.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH--HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE--RLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~--~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++|+||||||+||.+++++|+++||+|+++.|+++..+.  .+.+++..+.+...+..|++|+++++++++        +
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--------g   78 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--------G   78 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh--------C
Confidence            399999999999999999999999999999999987444  356666556678999999999999999994        5


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-CC-----------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-PL-----------  156 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~~-----------  156 (367)
                      +|+|+|+|.+.....     .+...+++++++.|+.++++++...   ....|||++||.++.... +.           
T Consensus        79 cdgVfH~Asp~~~~~-----~~~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   79 CDGVFHTASPVDFDL-----EDPEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             CCEEEEeCccCCCCC-----CCcHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCccccccc
Confidence            999999999875542     1134579999999999999999654   247899999999998653 11           


Q ss_pred             C----------ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh---cCCC--C
Q 035642          157 T----------PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS---RTPI--C  221 (367)
Q Consensus       157 ~----------~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~p~--~  221 (367)
                      |          ..|+.||...|..+|.++.|.   |+...+|+||+|.+|....... .........+..   ..+.  .
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~-~s~~~~l~~i~G~~~~~~n~~~  226 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLN-SSLNALLKLIKGLAETYPNFWL  226 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccc-hhHHHHHHHHhcccccCCCCce
Confidence            1          259999999999999999984   8999999999999998776222 111112222221   2221  2


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCCCCCCCcccchhhhhhhccccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGT  283 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
                      .+++++|||.++++++  +.....|+++.++...+ .+.+.+++.+.+|.+.  +|.+.+..
T Consensus       227 ~~VdVrDVA~AHv~a~--E~~~a~GRyic~~~~~~-~~ei~~~l~~~~P~~~--ip~~~~~~  283 (327)
T KOG1502|consen  227 AFVDVRDVALAHVLAL--EKPSAKGRYICVGEVVS-IKEIADILRELFPDYP--IPKKNAEE  283 (327)
T ss_pred             eeEeHHHHHHHHHHHH--cCcccCceEEEecCccc-HHHHHHHHHHhCCCCC--CCCCCCcc
Confidence            3689999999999999  66777888888777777 7888888899999886  56655554

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=2.9e-24  Score=244.79  Aligned_cols=181  Identities=18%  Similarity=0.231  Sum_probs=158.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCCh--------------------------------------------
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQ--------------------------------------------   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~--------------------------------------------   44 (367)
                      .+++|||||++|||+++|++|+++ |++|++++|+.                                            
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            449999999999999999999998 69999999982                                            


Q ss_pred             ---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhH
Q 035642           45 ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE  121 (367)
Q Consensus        45 ---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~  121 (367)
                         .+..+..+.+...|.++.++.||++|.++++++++++.+.  +++|+||||||+.....+.+.+.++|++++++|+.
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence               1112223344455778999999999999999999999876  57999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc
Q 035642          122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS  198 (367)
Q Consensus       122 g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~  198 (367)
                      |++++++++.+.+    .++||++||.++..+.+++..|+++|++++++++.++.++.  +++|++|+||+++|+|.
T Consensus      2155 G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2155 GLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence            9999999987643    35799999999999999999999999999999999999874  58999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.93  E-value=4.3e-24  Score=208.26  Aligned_cols=195  Identities=20%  Similarity=0.236  Sum_probs=150.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ +++|||||||||++++++|+++|++|++++|+.+++++..   ......+..+.+|++|++++.+.+       
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l-------  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL-------  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh-------
Confidence            34455 9999999999999999999999999999999876654322   222335677889999998876654       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC----CEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN----GIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~----g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       +++|++|||||....   .+.+.+++++++++|+.|+++++++++|.|++++.    +.+|++|| ++ ...+..+.|+
T Consensus       244 -~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~  317 (406)
T PRK07424        244 -EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE  317 (406)
T ss_pred             -CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence             679999999997543   35688999999999999999999999999976542    45666665 33 3334557899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+.+++. ++++.  .++.+..+.||++.|++..                    . ...+||++|+.++++++...
T Consensus       318 ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~--------------------~-~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        318 LSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP--------------------I-GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc--------------------C-CCCCHHHHHHHHHHHHHCCC
Confidence            99999999984 44443  3567778889998887521                    0 13489999999999985443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.3e-23  Score=181.31  Aligned_cols=175  Identities=26%  Similarity=0.349  Sum_probs=150.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHH---HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNER---LQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~---~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++||||+||||.+++++|+++|+ .|++++|+.+..+..   .++++..+.++.++.+|++++++++++++++...+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999997 688888876544332   24454556788899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|++|||||.....+..+.+.++++.++++|+.+++.+++++.+    .+.++||++||..+..+.++...|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            8999999999987666677788999999999999999999998843    446899999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIR  194 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~  194 (367)
                      ++.+++.++.    .|+++.+++||++.
T Consensus       156 ~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHh----cCCceEEEeecccc
Confidence            9999987764    48889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.2e-22  Score=202.91  Aligned_cols=218  Identities=14%  Similarity=0.118  Sum_probs=165.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-----C----CcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-----G----LKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-----~----~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++|||||+||||++++++|+++|++|++++|+.++++.+.+++...     +    .++.++.+|++|.+++.+.+    
T Consensus        82 vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL----  157 (576)
T PLN03209         82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL----  157 (576)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh----
Confidence            9999999999999999999999999999999998887776655321     1    35888999999999887654    


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~  161 (367)
                          +++|+||||+|....      ...++...+++|+.|+.++++++..    .+.++||++||.++. .+.+.. .|.
T Consensus       158 ----ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~~-~~~  222 (576)
T PLN03209        158 ----GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFPAA-ILN  222 (576)
T ss_pred             ----cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCcccc-chh
Confidence                679999999997532      1224677889999999999998854    356899999998764 232222 344


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                       +|+++..+.+.++.++...||+++.|+||++.|++...... ..    ........+.++.++.+|||++++|++++..
T Consensus       223 -sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t-~~----v~~~~~d~~~gr~isreDVA~vVvfLasd~~  296 (576)
T PLN03209        223 -LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET-HN----LTLSEEDTLFGGQVSNLQVAELMACMAKNRR  296 (576)
T ss_pred             -hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccc-cc----eeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence             78888888888888888889999999999999885432111 00    1111223567888999999999999997442


Q ss_pred             CCccccEEEeCCCc
Q 035642          242 SYITGQVICVDGGM  255 (367)
Q Consensus       242 ~~itG~~i~vdgG~  255 (367)
                      . ..++++.+-++-
T Consensus       297 a-s~~kvvevi~~~  309 (576)
T PLN03209        297 L-SYCKVVEVIAET  309 (576)
T ss_pred             h-ccceEEEEEeCC
Confidence            2 247777776654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=1.3e-22  Score=193.90  Aligned_cols=225  Identities=14%  Similarity=0.122  Sum_probs=162.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+++|||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|++|+++++++++        
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   76 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID--------   76 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc--------
Confidence            349999999999999999999999999999999876554432222211  2468889999999999888773        


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC------------
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP------------  155 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~------------  155 (367)
                      ++|+|||+||....    ..+.+.+...+++|+.|++++++++.+.+   +.++||++||.+++.+..            
T Consensus        77 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         77 GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcC
Confidence            58999999996532    22344578899999999999999997753   247999999987653311            


Q ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCC----
Q 035642          156 ----------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPI----  220 (367)
Q Consensus       156 ----------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~----  220 (367)
                                ....|+.||.+.+.+++.++.++   |++++.+.|+.+.+|.......  .....+..+. ...+.    
T Consensus       150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~--~~~~~i~~~~~~~~~~~~~~  224 (325)
T PLN02989        150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLN--FSVAVIVELMKGKNPFNTTH  224 (325)
T ss_pred             CCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCC--chHHHHHHHHcCCCCCCCcC
Confidence                      02469999999999999988764   7999999999999986543111  1111222222 22233    


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +.+..++|+|++++.++..  ....| .++++|+...
T Consensus       225 r~~i~v~Dva~a~~~~l~~--~~~~~-~~ni~~~~~s  258 (325)
T PLN02989        225 HRFVDVRDVALAHVKALET--PSANG-RYIIDGPVVT  258 (325)
T ss_pred             cCeeEHHHHHHHHHHHhcC--cccCc-eEEEecCCCC
Confidence            3577899999999988843  22234 6788655333

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1.6e-22  Score=193.07  Aligned_cols=236  Identities=14%  Similarity=0.087  Sum_probs=165.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++||||+|+||++++++|+++|++|+++.|+.++.+........  ...++.++.+|++++++++++++        .
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   77 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE--------G   77 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh--------C
Confidence            3999999999999999999999999999999987655443332221  12468889999999999888874        4


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCC------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAP------------  155 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~------------  155 (367)
                      +|++||+|+.....     ..+...+++++|+.|+.++++++...   .+.++||++||.++.. +.+            
T Consensus        78 ~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~  149 (322)
T PLN02986         78 CDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETF  149 (322)
T ss_pred             CCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCccc
Confidence            89999999975321     11223567899999999999987542   2457999999987532 110            


Q ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-----CC
Q 035642          156 ---------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-----IC  221 (367)
Q Consensus       156 ---------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-----~~  221 (367)
                               ....|++||.+.+.+++.+.+++   |+++++++|+.+.+|........  .......+....+     ..
T Consensus       150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~--~~~~~~~~~~g~~~~~~~~~  224 (322)
T PLN02986        150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNF--SVELIVDFINGKNLFNNRFY  224 (322)
T ss_pred             CCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCc--cHHHHHHHHcCCCCCCCcCc
Confidence                     13569999999999999998764   79999999999999865421110  1112222222211     23


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCCCCCCCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAID  270 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~~~~~  270 (367)
                      .+.+++|+|++++.++..  ....| +++++|+........+.+.+.+|
T Consensus       225 ~~v~v~Dva~a~~~al~~--~~~~~-~yni~~~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        225 RFVDVRDVALAHIKALET--PSANG-RYIIDGPIMSVNDIIDILRELFP  270 (322)
T ss_pred             ceeEHHHHHHHHHHHhcC--cccCC-cEEEecCCCCHHHHHHHHHHHCC
Confidence            478999999999998843  33344 77886654444444444444444

>PLN02583 cinnamoyl-CoA reductase

Probab=99.90  E-value=3.2e-22  Score=189.02  Aligned_cols=236  Identities=8%  Similarity=-0.006  Sum_probs=164.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +-++ +|+||||+|+||++++++|+++|++|++++|+.+  +.......+...+.++.++.+|++|.+++.+++      
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l------   76 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL------   76 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH------
Confidence            3344 9999999999999999999999999999999643  222233333222446888999999999887666      


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-C--------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-P--------  155 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~--------  155 (367)
                        ..+|.++|.++.....     . ..+++++++|+.|++++++++.+.+   +.++||++||.++.... +        
T Consensus        77 --~~~d~v~~~~~~~~~~-----~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         77 --KGCSGLFCCFDPPSDY-----P-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             --cCCCEEEEeCccCCcc-----c-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence              4589999877643211     1 2467899999999999999997653   35799999998765311 0        


Q ss_pred             ---CC----------ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC--C
Q 035642          156 ---LT----------PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP--I  220 (367)
Q Consensus       156 ---~~----------~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p--~  220 (367)
                         .+          ..|+.||...+.+++.++.+.   |+++++|+|+++.+|.......      .........+  .
T Consensus       146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~  216 (297)
T PLN02583        146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHNP------YLKGAAQMYENGV  216 (297)
T ss_pred             CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCchh------hhcCCcccCcccC
Confidence               01          159999999999999987653   8999999999999986432110      1110000111  1


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc-cccCCCCCCCCCcccch
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM-TVNGFNPTCCPNAIDHL  272 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~-~~~~~~~~~~~~~~~~~  272 (367)
                      ..+++++|+|++++.++.  .....| ++.+.++. +......+++.+.+|..
T Consensus       217 ~~~v~V~Dva~a~~~al~--~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~~  266 (297)
T PLN02583        217 LVTVDVNFLVDAHIRAFE--DVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPLI  266 (297)
T ss_pred             cceEEHHHHHHHHHHHhc--CcccCC-cEEEecCCCccHHHHHHHHHHhCCCC
Confidence            237899999999999984  344445 66666664 33444555556666654

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.90  E-value=1.3e-21  Score=187.25  Aligned_cols=213  Identities=18%  Similarity=0.117  Sum_probs=157.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+|+||++++++|+++|  ++|++++|+..+...+.+.+.  +.++.++.+|++|++++.+++        .+
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~--------~~   74 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRAL--------RG   74 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHH--------hc
Confidence            389999999999999999999987  789999998765544433332  246888999999999988876        35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+|||+||.... +..+.+   .+..+++|+.|+.++++++.+    .+.++||++||.....+   ...|++||++.+
T Consensus        75 iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~~~E  143 (324)
T TIGR03589        75 VDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKLASD  143 (324)
T ss_pred             CCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHHHHH
Confidence            8999999997532 222222   346899999999999999875    34579999999765433   467999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc---CCC------CCCCCHHHHHHHHHHHhCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR---TPI------CRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---~p~------~~~~~~~dvA~ai~~L~s~  239 (367)
                      .+++.++.+.+..|+++++++||.+.+|...      -.+.+.......   .|.      +.+..++|++++++.++. 
T Consensus       144 ~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~-  216 (324)
T TIGR03589       144 KLFVAANNISGSKGTRFSVVRYGNVVGSRGS------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLE-  216 (324)
T ss_pred             HHHHHHHhhccccCcEEEEEeecceeCCCCC------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHh-
Confidence            9999998888888999999999999987421      111122222211   122      236789999999999883 


Q ss_pred             CCCCccccEEEeCCC
Q 035642          240 AASYITGQVICVDGG  254 (367)
Q Consensus       240 ~~~~itG~~i~vdgG  254 (367)
                       .. ..|+.+ +..|
T Consensus       217 -~~-~~~~~~-~~~~  228 (324)
T TIGR03589       217 -RM-LGGEIF-VPKI  228 (324)
T ss_pred             -hC-CCCCEE-ccCC
Confidence             22 246666 4443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=4.2e-22  Score=174.81  Aligned_cols=175  Identities=21%  Similarity=0.340  Sum_probs=141.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++|||||+||||..+++.|+++|+ +|++++|+.   ...++..++++..+.++.++.||++|++++.++++++.+.+ 
T Consensus         1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-   79 (181)
T PF08659_consen    1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-   79 (181)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-
Confidence            4899999999999999999999987 899999993   34556778888888999999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++++.|||+||.....++.+.+.+.++.++.+.+.|..++.+++.+    .....+|++||.++..+.+++..|+++.+.
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            8999999999998888899999999999999999999999988754    446789999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIR  194 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~  194 (367)
                      ++.+++.....    |.++.+|+.|...
T Consensus       156 lda~a~~~~~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  156 LDALARQRRSR----GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred             HHHHHHHHHhC----CCCEEEEEccccC
Confidence            99999987643    7789999988764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.88  E-value=9.4e-21  Score=182.96  Aligned_cols=228  Identities=13%  Similarity=0.009  Sum_probs=162.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++|++|++++|+..........+. .+.++.++.+|++|.+++.++++.      .++|
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d   77 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------FKPE   77 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------cCCC
Confidence            489999999999999999999999999999998765443333332 133577889999999999988875      3589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------CCCCCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------AAPLTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------~~~~~~  158 (367)
                      +|||+||....    ..+.+++...+++|+.+++++++++...   ...+++|++||...+.            +..+..
T Consensus        78 ~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~  150 (349)
T TIGR02622        78 IVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHD  150 (349)
T ss_pred             EEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCC
Confidence            99999995422    2245567788999999999999987431   2257999999965432            123356


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC--------CCCCCCCH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAK----DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT--------PICRPGEP  226 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~----~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------p~~~~~~~  226 (367)
                      .|+.||.+.+.+++.++.++.+    .|++++.+.|+.+.+|....  .....+.+........        ....+...
T Consensus       151 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v  228 (349)
T TIGR02622       151 PYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA--EDRLIPDVIRAFSSNKIVIIRNPDATRPWQHV  228 (349)
T ss_pred             cchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch--hhhhhHHHHHHHhcCCCeEECCCCcccceeeH
Confidence            8999999999999999988754    48999999999999885311  1111112333332221        12345779


Q ss_pred             HHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 035642          227 DEVSSLVAFLCFPA--ASYITGQVICVDGG  254 (367)
Q Consensus       227 ~dvA~ai~~L~s~~--~~~itG~~i~vdgG  254 (367)
                      +|++++++.++...  .....|+.+++.+|
T Consensus       229 ~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       229 LEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            99999998876321  11123578888754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.87  E-value=2.8e-20  Score=179.75  Aligned_cols=208  Identities=14%  Similarity=0.097  Sum_probs=149.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.+............  ..++.++.+|++|.++++++++        .
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--------~   77 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR--------G   77 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh--------C
Confidence            49999999999999999999999999999999876655443332211  2357889999999998887763        4


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----C---------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----P---------  155 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----~---------  155 (367)
                      +|+|||+|+.....     ..+.++..+++|+.|+.++++++.+..   ..++||++||.....+.    +         
T Consensus        78 ~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         78 CTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            89999999864321     112235778999999999999987641   24689999997543211    0         


Q ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc------CCC
Q 035642          156 ---------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR------TPI  220 (367)
Q Consensus       156 ---------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~p~  220 (367)
                               ....|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|............ ........      ...
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  225 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLIT-ALSLITGNEAHYSIIKQ  225 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHH-HHHHhcCCccccCcCCC
Confidence                     1136999999999999999876   4899999999999999654321111100 11101111      112


Q ss_pred             CCCCCHHHHHHHHHHHhC
Q 035642          221 CRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s  238 (367)
                      +.+..++|+|++++.++.
T Consensus       226 r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        226 GQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             cceeeHHHHHHHHHHHhc
Confidence            467899999999999884

>PLN02214 cinnamoyl-CoA reductase

Probab=99.87  E-value=4.1e-20  Score=178.13  Aligned_cols=218  Identities=13%  Similarity=0.079  Sum_probs=154.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~-~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +++||||+|+||++++++|+++|++|++++|+.++... ....+.....++.++.+|++|.++++++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            344 89999999999999999999999999999998764322 122232222368888999999999888773       


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----------  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----------  155 (367)
                       ++|+|||+|+...         ++++..+++|+.|+.++++++..    .+.++||++||.++..+.+           
T Consensus        81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E~  146 (342)
T PLN02214         81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDES  146 (342)
T ss_pred             -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence             5899999999642         13467889999999999999864    3457999999976543210           


Q ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-----C
Q 035642          156 ----------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-----I  220 (367)
Q Consensus       156 ----------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-----~  220 (367)
                                ....|+.||.+.+.+++.++.+.   |+++..++|+.+.+|........ ........+....+     .
T Consensus       147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINA-SLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             cCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHcCCcccCCCCC
Confidence                      12369999999999999988764   89999999999999864321111 11111111111111     1


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                      ..+.+++|+|++++.++.  .....| .+++.++
T Consensus       223 ~~~i~V~Dva~a~~~al~--~~~~~g-~yn~~~~  253 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYE--APSASG-RYLLAES  253 (342)
T ss_pred             cCeeEHHHHHHHHHHHHh--CcccCC-cEEEecC
Confidence            246789999999999883  333344 5566543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=3.6e-19  Score=172.18  Aligned_cols=211  Identities=16%  Similarity=0.128  Sum_probs=151.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+.++.+.....+.. +.++.++.+|+++.+++.+++        ..+|+
T Consensus        12 ~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~--------~~~d~   82 (353)
T PLN02896         12 TYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV--------KGCDG   82 (353)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH--------cCCCE
Confidence            899999999999999999999999999999987766655554432 456888999999999888876        35899


Q ss_pred             EEEcCCCCCCCC-ccCCCHHHH--HHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--------------
Q 035642           92 LVNNAAVAVPKE-ALDTTAEYM--STLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------------  154 (367)
Q Consensus        92 lI~~Ag~~~~~~-~~~~~~e~~--~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--------------  154 (367)
                      |||+|+...... ....+.+.+  ..++++|+.|+.++++++.+.   .+.++||++||.+.+...              
T Consensus        83 Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~  159 (353)
T PLN02896         83 VFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKDSNGRWRAVVDETC  159 (353)
T ss_pred             EEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccccCCCCCCccCccc
Confidence            999999764331 111222222  457788899999999998654   235799999997654311              


Q ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC---C-
Q 035642          155 -----------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT---P-  219 (367)
Q Consensus       155 -----------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---p-  219 (367)
                                 +....|+.||.+.+.+++.++.++   |+++.++.|+.+.+|........ ........+....   + 
T Consensus       160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~-~~~~~~~~~~g~~~~~~~  235 (353)
T PLN02896        160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPS-SIQVLLSPITGDSKLFSI  235 (353)
T ss_pred             CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCc-hHHHHHHHhcCCcccccc
Confidence                       011379999999999999988764   79999999999999865321111 1111111111110   0 


Q ss_pred             ---------CCCCCCHHHHHHHHHHHhC
Q 035642          220 ---------ICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       220 ---------~~~~~~~~dvA~ai~~L~s  238 (367)
                               ..-+..++|+|++++.++.
T Consensus       236 ~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        236 LSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             ccccccccCceeEEeHHHHHHHHHHHHh
Confidence                     1136789999999999884

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.85  E-value=3.5e-19  Score=171.17  Aligned_cols=207  Identities=14%  Similarity=0.115  Sum_probs=147.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ--EWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~--~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.+.......  .+.. ..++.++.+|++|++++.+++        .+
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~--------~~   80 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPI--------AG   80 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHH--------hc
Confidence            389999999999999999999999999988888654332221  1111 135788999999999888776        35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------------  154 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--------------  154 (367)
                      +|+|||+|+....   .  ..+.+...+++|+.|+.++++++.+.   .+.++||++||.+.+...              
T Consensus        81 ~d~vih~A~~~~~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~  152 (338)
T PLN00198         81 CDLVFHVATPVNF---A--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNW  152 (338)
T ss_pred             CCEEEEeCCCCcc---C--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccC
Confidence            8999999995321   1  12234567899999999999998653   235799999998654311              


Q ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc-------
Q 035642          155 ----------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR-------  217 (367)
Q Consensus       155 ----------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------  217 (367)
                                +....|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|........ ... ....+...       
T Consensus       153 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~-~~~-~~~~~~~~~~~~~~g  227 (338)
T PLN00198        153 TDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPS-SLS-LAMSLITGNEFLING  227 (338)
T ss_pred             CchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCC-cHH-HHHHHHcCCcccccc
Confidence                      12446999999999999998876   379999999999999864321111 000 11111111       


Q ss_pred             ---CC----CCCCCCHHHHHHHHHHHhCC
Q 035642          218 ---TP----ICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       218 ---~p----~~~~~~~~dvA~ai~~L~s~  239 (367)
                         .+    ...+..++|+|++++.++..
T Consensus       228 ~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        228 LKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             ccccccccCCcceeEHHHHHHHHHHHhhC
Confidence               11    12578999999999998843

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.85  E-value=1.3e-19  Score=175.25  Aligned_cols=224  Identities=11%  Similarity=0.044  Sum_probs=157.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEE-EEeCChhHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIH-TCSRNQTEL--NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi-~~~R~~~~~--~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++|||||+|+||++++++|+++|+.|+ +++|.....  .... .. ..+.++.++.+|++|.+++++++++      .+
T Consensus         3 ~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~~   74 (355)
T PRK10217          3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTE------HQ   74 (355)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhh------cC
Confidence            799999999999999999999998754 455543211  1111 11 1234677889999999999888864      35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH---c--CCCCEEEEecCccccc-----------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK---A--SGNGIIVFISSVAGVT-----------  152 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~---~--~~~g~IV~iSS~~~~~-----------  152 (367)
                      +|+|||+||....    +.+.+.++..+++|+.|+.++++++.+.|.   .  .+..++|++||.+.+.           
T Consensus        75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            9999999997532    123456788999999999999999987542   1  2346899999964321           


Q ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CC
Q 035642          153 --AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------IC  221 (367)
Q Consensus       153 --~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~  221 (367)
                        +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+.+|....   .......+.......+         ..
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFP---EKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCc---ccHHHHHHHHHhcCCCceEeCCCCeee
Confidence              12245679999999999999998775   7888999999998885421   1111112222222211         12


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .+..++|+++++..++..  . ..|+.+++.+|..
T Consensus       225 ~~i~v~D~a~a~~~~~~~--~-~~~~~yni~~~~~  256 (355)
T PRK10217        225 DWLYVEDHARALYCVATT--G-KVGETYNIGGHNE  256 (355)
T ss_pred             CcCcHHHHHHHHHHHHhc--C-CCCCeEEeCCCCc
Confidence            367899999999888742  2 3578899988754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=3.9e-19  Score=169.34  Aligned_cols=219  Identities=13%  Similarity=0.113  Sum_probs=151.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.............  ...++.++.+|++|++++++++        .+
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~   76 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV--------DG   76 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--------cC
Confidence            3899999999999999999999999999999986543322221111  1246888999999999888777        35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cC-C------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TA-A------------  154 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~-~------------  154 (367)
                      +|+|||+|+.....     ..+..+..+++|+.|+.++++++...   .+.++||++||.++. .+ .            
T Consensus        77 ~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         77 CEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             CCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            89999999975321     11122478899999999999998643   145799999997642 11 1            


Q ss_pred             ---C-----CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc---CC--CC
Q 035642          155 ---P-----LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR---TP--IC  221 (367)
Q Consensus       155 ---~-----~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---~p--~~  221 (367)
                         +     ....|+.||.+.+.+++.+..+.   |++++.++|+.+.+|........  .......+...   .|  ..
T Consensus       149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  223 (322)
T PLN02662        149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNT--SAEAILNLINGAQTFPNASY  223 (322)
T ss_pred             CCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCc--hHHHHHHHhcCCccCCCCCc
Confidence               0     01369999999999999887663   79999999999999864321111  11112222111   11  23


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      .+..++|+|++++.++..  ....| .+++.|
T Consensus       224 ~~i~v~Dva~a~~~~~~~--~~~~~-~~~~~g  252 (322)
T PLN02662        224 RWVDVRDVANAHIQAFEI--PSASG-RYCLVE  252 (322)
T ss_pred             CeEEHHHHHHHHHHHhcC--cCcCC-cEEEeC
Confidence            478999999999998843  22345 445543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.84  E-value=3.2e-20  Score=164.11  Aligned_cols=192  Identities=20%  Similarity=0.201  Sum_probs=164.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-----EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHH
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGA-----IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~-----~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      +.+++||||+++|||.+++++|++..-     ++++++|+.++++++.+.+.+.    ..++.++.+|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            456999999999999999999997653     5788999999999999888763    3478899999999999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCc---------------------------cCCCHHHHHHhHHHhhHHHHHHHHHHHH
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEA---------------------------LDTTAEYMSTLRSTNFESVFHLSKLAHP  132 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~---------------------------~~~~~e~~~~~~~vNv~g~~~l~~~~~~  132 (367)
                      ++.++| .++|.+..|||++....+                           ...+.|++..+|+.|+.|++.+.+.+.|
T Consensus        82 di~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   82 DIKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999999 899999999998643211                           0235678899999999999999999999


Q ss_pred             HHHcCCCCEEEEecCcccccC---------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc
Q 035642          133 LLKASGNGIIVFISSVAGVTA---------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI  201 (367)
Q Consensus       133 ~m~~~~~g~IV~iSS~~~~~~---------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~  201 (367)
                      .+-.++...+|.+||..+...         ..+...|..||.+..-+.-.+-+.+.+.|+.-+.++||...|.+....
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~  238 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEY  238 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhh
Confidence            998777779999999887643         345678999999999999999999999999999999999988876543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=3.5e-19  Score=171.28  Aligned_cols=225  Identities=14%  Similarity=0.013  Sum_probs=149.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-----LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-----~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++|||||+|+||++++++|+++|++|++++|+.+.     ++...+.....+.++.++.+|++|.+++.++++..     
T Consensus         8 ~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   82 (340)
T PLN02653          8 VALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-----   82 (340)
T ss_pred             EEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-----
Confidence            89999999999999999999999999999987542     22111111112346889999999999999988753     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC----------CC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA----------AP  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~----------~~  155 (367)
                       .+|+|||+|+......    ..+..+..+++|+.|+.++++++.+++.+++ ..++|++||.+.+-.          ..
T Consensus        83 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~  157 (340)
T PLN02653         83 -KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFH  157 (340)
T ss_pred             -CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCC
Confidence             5899999999754321    2344567789999999999999988754321 127888988643321          11


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc----------CCCCC
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAK---DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR----------TPICR  222 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~---~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----------~p~~~  222 (367)
                      +...|+.||.+.+.+++.++.+++-   .++.+|.+.|+...+.+.      .........+...          ....-
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~g~~~rd  231 (340)
T PLN02653        158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT------RKITRAVGRIKVGLQKKLFLGNLDASRD  231 (340)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccch------hHHHHHHHHHHcCCCCceEeCCCcceec
Confidence            3567999999999999999887642   123334444543221100      0001111111111          11224


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +..++|+|++++.++..  .  .+..+++.+|..
T Consensus       232 ~i~v~D~a~a~~~~~~~--~--~~~~yni~~g~~  261 (340)
T PLN02653        232 WGFAGDYVEAMWLMLQQ--E--KPDDYVVATEES  261 (340)
T ss_pred             ceeHHHHHHHHHHHHhc--C--CCCcEEecCCCc
Confidence            67899999999998842  2  245688877643

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.83  E-value=1.7e-18  Score=172.21  Aligned_cols=227  Identities=13%  Similarity=0.091  Sum_probs=154.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh---H----H---------HHHHHHHH-hcCCcEEEEEccCCCHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT---E----L---------NERLQEWK-LKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~---~----~---------~~~~~~l~-~~~~~~~~~~~Dlsd~~sv   74 (367)
                      +||||||+|+||++++++|+++|++|++++|...   .    .         ....+.+. ..+.++.++.+|++|.+++
T Consensus        49 ~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v  128 (442)
T PLN02572         49 KVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFL  128 (442)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHH
Confidence            8999999999999999999999999999875321   0    0         00111111 1134688999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTA  153 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~  153 (367)
                      .++++.      .++|+|||+|+.... .....+.++++..+++|+.|++++++++...    +. .++|++||.+.+..
T Consensus       129 ~~~l~~------~~~D~ViHlAa~~~~-~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS~~vYG~  197 (442)
T PLN02572        129 SEAFKS------FEPDAVVHFGEQRSA-PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGTMGEYGT  197 (442)
T ss_pred             HHHHHh------CCCCEEEECCCcccC-hhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEecceecCC
Confidence            988875      268999999976432 2233345567788899999999999988653    23 48999999764321


Q ss_pred             ------------------------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-------
Q 035642          154 ------------------------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-------  202 (367)
Q Consensus       154 ------------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-------  202 (367)
                                              ......|+.||.+.+.+++.++..   +|+++..+.|+.+.+|......       
T Consensus       198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~~~~~~li~  274 (442)
T PLN02572        198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETMMDEELIN  274 (442)
T ss_pred             CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCccccccccccc
Confidence                                    112357999999999999988766   4899999999999998643210       


Q ss_pred             ----C---ChhhhHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccc--cEEEeCCC
Q 035642          203 ----H---DPAKNKIVEGLVSRTPI---------CRPGEPDEVSSLVAFLCFPAASYITG--QVICVDGG  254 (367)
Q Consensus       203 ----~---~~~~~~~~~~~~~~~p~---------~~~~~~~dvA~ai~~L~s~~~~~itG--~~i~vdgG  254 (367)
                          .   .......+.......+.         +.+..++|+|++++.++..  ....|  ..+++.++
T Consensus       275 ~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~--~~~~g~~~i~Nigs~  342 (442)
T PLN02572        275 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIAN--PAKPGEFRVFNQFTE  342 (442)
T ss_pred             ccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhC--hhhcCceeEEEeCCC
Confidence                0   01111122222222221         2467899999999988842  22235  45666443

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.83  E-value=2.6e-19  Score=167.61  Aligned_cols=222  Identities=16%  Similarity=0.150  Sum_probs=156.8

Q ss_pred             EEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           14 FITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        14 LVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      |||||+|+||++++++|+++|  ++|.++++......  ...+.. -....++.+|++|++++.++++        ++|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~-~~~~~~~~~Di~d~~~l~~a~~--------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK-SGVKEYIQGDITDPESLEEALE--------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc-ccceeEEEeccccHHHHHHHhc--------CCce
Confidence            699999999999999999999  78998888765422  111211 1223388999999999999884        5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC---C--------------
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA---A--------------  154 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~---~--------------  154 (367)
                      |||+|++.....     ....+.++++|+.|+.++++++..    .+..++|++||.++...   .              
T Consensus        70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999865432     344578899999999999999864    46789999999987654   0              


Q ss_pred             CCCccHHHHHHHHHHHHHHHHH-HhC-CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC------CCCCCCH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLEC-EQA-KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP------ICRPGEP  226 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~-e~~-~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~  226 (367)
                      .....|+.||+..|.+++.... ++. ...++..+|+|..|.+|.-........  .....-.....      ..-+..+
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~--~~~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLV--KMVRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhh--HHHHhcccceeecCCCceECcEeH
Confidence            1234799999999999998765 111 125899999999999986443322111  01111000111      1225679


Q ss_pred             HHHHHHHHHHhC---CC--CCCccccEEEeCCCccc
Q 035642          227 DEVSSLVAFLCF---PA--ASYITGQVICVDGGMTV  257 (367)
Q Consensus       227 ~dvA~ai~~L~s---~~--~~~itG~~i~vdgG~~~  257 (367)
                      +++|.+++..+.   +.  ...+.|+.+.+..|...
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            999999987542   22  35678999999776443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.82  E-value=2.5e-18  Score=166.13  Aligned_cols=230  Identities=12%  Similarity=0.047  Sum_probs=158.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-----KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-----~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .+++ +||||||+|+||.+++++|+++|++|++++|...........+..     ...++.++.+|++|.+++.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            3444 899999999999999999999999999999865432222222211     11357889999999888877763  


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------  154 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------  154 (367)
                            .+|+|||.|+......    ..++....+++|+.|+.++++++..    .+..++|++||.+.+...       
T Consensus        90 ------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e  155 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPKIE  155 (348)
T ss_pred             ------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCCCC
Confidence                  4899999999753321    2223345789999999999998743    455799999997544211       


Q ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-CChhhhHHHHHHhhcCCC---------
Q 035642          155 ----PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-HDPAKNKIVEGLVSRTPI---------  220 (367)
Q Consensus       155 ----~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~p~---------  220 (367)
                          .+...|+.||.+.+.+++.++.+.   |+++..+.|+.+.+|...... .....+..+..+....+.         
T Consensus       156 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~  232 (348)
T PRK15181        156 ERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS  232 (348)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce
Confidence                123579999999999999887653   799999999999998643211 011112233333322221         


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .-+..++|+|++++.++........|+.+++.+|..
T Consensus       233 rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        233 RDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             EeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence            234679999999987663222224678999987754

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=1.8e-18  Score=165.05  Aligned_cols=187  Identities=18%  Similarity=0.111  Sum_probs=142.1

Q ss_pred             eEEEEcCCChhHHH--HHHHHHHCCCEEEEEeCChhHH------------HHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Q 035642           12 NYFITGGTRGIGHA--IVEELAGFGAIIHTCSRNQTEL------------NERLQEWKLKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        12 ~vLVTGas~GIG~a--ia~~L~~~G~~Vi~~~R~~~~~------------~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      ++|||||++|||.+  +|+.| ++|++|+++++..++.            +...+.+...+..+..+.||++++++++++
T Consensus        43 ~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~l  121 (398)
T PRK13656         43 KVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKV  121 (398)
T ss_pred             EEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            99999999999999  89999 9999988888543221            223444444466778899999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCC-----------------cc-----------------CCCHHHHHHhHHHhhHHH
Q 035642           78 METVSSIFQGKLNLLVNNAAVAVPKE-----------------AL-----------------DTTAEYMSTLRSTNFESV  123 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag~~~~~~-----------------~~-----------------~~~~e~~~~~~~vNv~g~  123 (367)
                      ++++.+.+ |++|+||||+|......                 +.                 ..+.++++.+  ++++|.
T Consensus       122 ie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~vMgg  198 (398)
T PRK13656        122 IELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKVMGG  198 (398)
T ss_pred             HHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHhhcc
Confidence            99999999 89999999999763211                 11                 1334444444  334443


Q ss_pred             ---HHHH--HHHHHHHHcCCCCEEEEecCcccccCCCCC--ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCC
Q 035642          124 ---FHLS--KLAHPLLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTS  196 (367)
Q Consensus       124 ---~~l~--~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~  196 (367)
                         ...+  ....+.|  ..++++|..|+..+....|.+  ..-+.+|++++..++.|+.++++.|+|+|++.+|.+.|.
T Consensus       199 edw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        199 EDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             chHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence               2233  3334444  346899999998887777766  478999999999999999999999999999999999998


Q ss_pred             ccccccCC
Q 035642          197 LSDAIRHD  204 (367)
Q Consensus       197 ~~~~~~~~  204 (367)
                      -...++.-
T Consensus       277 Ass~Ip~~  284 (398)
T PRK13656        277 ASSAIPVM  284 (398)
T ss_pred             hhhcCCCc
Confidence            76665443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.82  E-value=1.9e-18  Score=163.61  Aligned_cols=223  Identities=13%  Similarity=0.052  Sum_probs=155.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++||||||+||.+++++|+++|  ++|++.+|.... ..+..+.+.. ..++.++.+|++|++++.++++.      .+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTE------HQ   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhh------cC
Confidence            48999999999999999999987  789888764211 1111122211 23577889999999999888864      25


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC------------CCC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA------------APL  156 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~------------~~~  156 (367)
                      +|+|||+|+.....    .+.+..+..+++|+.++.++++++...+.   ..++|++||...+..            ...
T Consensus        74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            89999999975432    13455677899999999999998865431   247999999653221            112


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCCCCHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRPGEPD  227 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~  227 (367)
                      ...|+.+|.+.+.+++.++.+.   ++++..+.|+.+.++.....   ...+..........+.         .-+..++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPE---KLIPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcc---cHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence            3479999999999999988764   78999999999988754221   1111122333222221         1256799


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+|+++..++..   ...|+++++.+|...
T Consensus       221 D~a~~~~~~~~~---~~~~~~~~~~~~~~~  247 (317)
T TIGR01181       221 DHCRAIYLVLEK---GRVGETYNIGGGNER  247 (317)
T ss_pred             HHHHHHHHHHcC---CCCCceEEeCCCCce
Confidence            999999988843   236788888776543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=1.1e-18  Score=151.13  Aligned_cols=143  Identities=16%  Similarity=0.110  Sum_probs=118.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|.+++ +++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.+..++.+|+++.++++++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345566 9999999999999999999999999999999988887777777655667788899999999999999999998


Q ss_pred             cCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-------CCEEEEecCccccc
Q 035642           85 FQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-------NGIIVFISSVAGVT  152 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-------~g~IV~iSS~~~~~  152 (367)
                      + |++|++|||||.... .++.+.+.++ ++  ..|+.+++..++.+.++|.+++       .||+..+||.++.+
T Consensus        91 ~-G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         91 F-SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             c-CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            8 899999999998764 3444445444 33  6778888999999988877653       58999999877643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=5.6e-18  Score=163.17  Aligned_cols=227  Identities=12%  Similarity=-0.015  Sum_probs=145.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-----LNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-----~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++|||||+|+||++++++|+++|++|++++|+.+.     .+.+.+... ..+.++.++.+|++|.+++.++++..    
T Consensus         2 ~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----   77 (343)
T TIGR01472         2 IALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI----   77 (343)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC----
Confidence            79999999999999999999999999999998642     221111110 01345889999999999999888752    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------C
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------A  154 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~  154 (367)
                        ++|+|||+|+......    ..+.-...+++|+.|+.++++++.+.-.+ +..++|++||.+.+..           .
T Consensus        78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCCC
Confidence              5899999999754321    22223566788999999999998764111 1247999999644321           1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc----------CCCCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR----------TPICRPG  224 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----------~p~~~~~  224 (367)
                      .+...|++||.+.+.+++.++.++   |+++....+..+.+|.................+...          .....+.
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence            234689999999999999998875   333322222222222111000000111112222111          1223467


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .++|+|++++.++...    .+..+++.+|..
T Consensus       228 ~V~D~a~a~~~~~~~~----~~~~yni~~g~~  255 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQD----KPDDYVIATGET  255 (343)
T ss_pred             eHHHHHHHHHHHHhcC----CCccEEecCCCc
Confidence            8999999998887422    134688876654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.81  E-value=3.7e-18  Score=164.90  Aligned_cols=224  Identities=11%  Similarity=0.063  Sum_probs=154.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++|||||+|+||++++++|+++|+. |+.+++..  ...+... .+. .+.++.++.+|++|.+++.+++++      .+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ------HQ   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence            5999999999999999999999986 55555532  1122221 111 134577889999999999988864      36


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-----CCCEEEEecCcccccC----------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-----GNGIIVFISSVAGVTA----------  153 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-----~~g~IV~iSS~~~~~~----------  153 (367)
                      +|+|||+||......    ..+..+..+++|+.|+.++++++.++|...     +..++|++||.+.+..          
T Consensus        74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            999999999753321    223346789999999999999998876321     2358999999643321          


Q ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC--C-
Q 035642          154 -----------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT--P-  219 (367)
Q Consensus       154 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--p-  219 (367)
                                 ..+...|+.||.+.+.+++.++.++   |+++..+.|+.+.+|....   ...............  + 
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~---~~~~~~~~~~~~~~~~~~~  223 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFP---EKLIPLVILNALEGKPLPI  223 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCc---cchHHHHHHHHhcCCCeEE
Confidence                       1234689999999999999998774   6777888999898875321   111111222222221  1 


Q ss_pred             ------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          220 ------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       220 ------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                            ...+..++|+|+++..++..  . ..|+.+++.++..
T Consensus       224 ~~~g~~~~~~v~v~D~a~a~~~~l~~--~-~~~~~yni~~~~~  263 (352)
T PRK10084        224 YGKGDQIRDWLYVEDHARALYKVVTE--G-KAGETYNIGGHNE  263 (352)
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhc--C-CCCceEEeCCCCc
Confidence                  12257899999999888742  2 3578888877653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=1.1e-17  Score=161.45  Aligned_cols=231  Identities=15%  Similarity=0.095  Sum_probs=153.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH----hcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK----LKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~----~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++||||+|+||.+++++|+++|++|++++|...........+.    ..+.++.++.+|++|++++.++++.      
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~------   79 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS------   79 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh------
Confidence            499999999999999999999999999999875432221111111    1234678899999999999888764      


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------AP  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~  155 (367)
                      ..+|+|||+|+......    +.+.+...+++|+.++.++++++.    +.+.+++|++||...+..           ..
T Consensus        80 ~~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~  151 (352)
T PLN02240         80 TRFDAVIHFAGLKAVGE----SVAKPLLYYDNNLVGTINLLEVMA----KHGCKKLVFSSSATVYGQPEEVPCTEEFPLS  151 (352)
T ss_pred             CCCCEEEEccccCCccc----cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence            36899999999753221    334567889999999999988663    344579999999643321           12


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-C-----ChhhhHHHHHHhh-cCC---------
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-H-----DPAKNKIVEGLVS-RTP---------  219 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-~-----~~~~~~~~~~~~~-~~p---------  219 (367)
                      +...|+.||.+.+.+++.++.+.  .++++..+.++.+.++...... .     ..........+.. ..+         
T Consensus       152 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  229 (352)
T PLN02240        152 ATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY  229 (352)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCC
Confidence            35689999999999999987652  3577788887766554211000 0     0000011222211 111         


Q ss_pred             -------CCCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCCccc
Q 035642          220 -------ICRPGEPDEVSSLVAFLCFPA--ASYITGQVICVDGGMTV  257 (367)
Q Consensus       220 -------~~~~~~~~dvA~ai~~L~s~~--~~~itG~~i~vdgG~~~  257 (367)
                             ..-+..++|+|++++.++...  .....|+.+++.+|...
T Consensus       230 ~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~  276 (352)
T PLN02240        230 PTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGT  276 (352)
T ss_pred             CCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcE
Confidence                   112467999999988776321  12345788998877653

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=5.6e-18  Score=164.79  Aligned_cols=207  Identities=13%  Similarity=0.090  Sum_probs=144.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +++ +||||||+|+||++++++|+++|++|+++.|+.+..+.+. .+...      +..+.++.+|++|.+++.++++  
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence            344 9999999999999999999999999999889876655442 22111      1257888999999999988874  


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc-ccC----C--
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG-VTA----A--  154 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~-~~~----~--  154 (367)
                            .+|.++|.|+.........    ..+...++|+.++.++++++...   .+..++|++||.++ ..+    .  
T Consensus       128 ------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             ------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCC
Confidence                  3789999998764332111    11344578999999999987532   24678999999642 110    0  


Q ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC
Q 035642          155 ----------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT  218 (367)
Q Consensus       155 ----------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (367)
                                      .....|+.||.+.+.+++.++.+   +|+++++++|+.+.+|........ .   ....+....
T Consensus       195 ~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~-~---~~~~~~g~~  267 (367)
T PLN02686        195 PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNST-A---TIAYLKGAQ  267 (367)
T ss_pred             CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCCh-h---HHHHhcCCC
Confidence                            01236999999999999998876   489999999999999964321111 1   111111111


Q ss_pred             C---CC--CCCCHHHHHHHHHHHhC
Q 035642          219 P---IC--RPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       219 p---~~--~~~~~~dvA~ai~~L~s  238 (367)
                      +   -+  .+.+++|+|++++.++.
T Consensus       268 ~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        268 EMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             ccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            1   11  36789999999998884

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.80  E-value=1.6e-17  Score=159.44  Aligned_cols=229  Identities=12%  Similarity=0.038  Sum_probs=152.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||+|+||++++++|+++|++|++++|...........+.. .+.++.++.+|++|.+++.++++.      .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCCC
Confidence            599999999999999999999999999987653332222222222 234567888999999998888753      4699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------CCCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------PLTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------~~~~  158 (367)
                      +|||+||......    ..+.....+++|+.++.++++++.    +.+.++||++||...+...            ....
T Consensus        76 ~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~  147 (338)
T PRK10675         76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQS  147 (338)
T ss_pred             EEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhhCCCCCCccccccCCCCCCC
Confidence            9999999754321    123345678999999999988764    3456799999997543211            2356


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-C-----ChhhhHHHHHHhh-cC----------C--
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-H-----DPAKNKIVEGLVS-RT----------P--  219 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-~-----~~~~~~~~~~~~~-~~----------p--  219 (367)
                      .|+.+|.+.+.+++.++.+.  .++++..+.++.+.++...... .     ....-..+..+.. ..          |  
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence            89999999999999987653  2577778887666654311110 0     0000011121111 10          1  


Q ss_pred             C----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          220 I----CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       220 ~----~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .    .-+..++|+|++++.++........|+++++.+|..
T Consensus       226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        226 DGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             CCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence            1    136789999999988774321223467899887754

>PLN02427 UDP-apiose/xylose synthase

Probab=99.79  E-value=2e-17  Score=161.99  Aligned_cols=222  Identities=14%  Similarity=0.095  Sum_probs=150.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.++...+..... ....++.++.+|++|.+++.++++        .+
T Consensus        16 ~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--------~~   87 (386)
T PLN02427         16 TICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--------MA   87 (386)
T ss_pred             EEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh--------cC
Confidence            7999999999999999999998 5899999988665443321100 012368899999999988887763        47


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---------C-----
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---------P-----  155 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---------~-----  155 (367)
                      |+|||+|+........    .+-.+.+..|+.++.++++++..    .+ .++|++||...+...         +     
T Consensus        88 d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~  158 (386)
T PLN02427         88 DLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDP  158 (386)
T ss_pred             CEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccccccccc
Confidence            9999999975432211    11224456899999999988743    23 689999997533210         0     


Q ss_pred             -------------------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc----CC----hhhh
Q 035642          156 -------------------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR----HD----PAKN  208 (367)
Q Consensus       156 -------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~----~~----~~~~  208 (367)
                                         ....|+.||.+.+.+++.++..   .|+++..+.|+.+.+|......    ..    ....
T Consensus       159 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~  235 (386)
T PLN02427        159 AFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA  235 (386)
T ss_pred             ccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccchHHH
Confidence                               1136999999999999887654   4899999999999998542111    00    0111


Q ss_pred             HHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          209 KIVEGLVSRTPI---------CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       209 ~~~~~~~~~~p~---------~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                      .+...+....|.         .-+..++|+|++++.++... ....|+.+++.+|
T Consensus       236 ~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        236 CFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             HHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence            122222222221         23678999999999888421 1246788998775

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.78  E-value=3.3e-17  Score=148.71  Aligned_cols=222  Identities=14%  Similarity=0.080  Sum_probs=162.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++|||||+|+||.++++.++++..  +|+.++.-.  ...+.+ +.+. ...+..++++|++|.+.+.+++++      .
T Consensus         2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~------~   73 (340)
T COG1088           2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKE------Y   73 (340)
T ss_pred             cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHh------c
Confidence            589999999999999999998875  466666532  112222 2222 245899999999999999999875      3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-------------cCC
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-------------TAA  154 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-------------~~~  154 (367)
                      ++|+++|-|+-.+...    +.+.-...+++|+.|++++++++..+..+   -|++.+|.-.-+             .+.
T Consensus        74 ~~D~VvhfAAESHVDR----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          74 QPDAVVHFAAESHVDR----SIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CCCeEEEechhccccc----cccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            7999999999765432    44555678899999999999999877422   478888873221             234


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC---------CCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC---------RPGE  225 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~  225 (367)
                      .+.+.|+||||+...+++++.+.+   |+.++..++..-.+|.+....   -.+..+-......|+.         .+.-
T Consensus       147 ~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEK---lIP~~I~nal~g~~lpvYGdG~~iRDWl~  220 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEK---LIPLMIINALLGKPLPVYGDGLQIRDWLY  220 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchh---hhHHHHHHHHcCCCCceecCCcceeeeEE
Confidence            567889999999999999999885   899999999999998765322   2222343334444432         3455


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          226 PDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++|-+.++...+.  ...+ |++++|.||.-.
T Consensus       221 VeDh~~ai~~Vl~--kg~~-GE~YNIgg~~E~  249 (340)
T COG1088         221 VEDHCRAIDLVLT--KGKI-GETYNIGGGNER  249 (340)
T ss_pred             eHhHHHHHHHHHh--cCcC-CceEEeCCCccc
Confidence            9999999988883  3333 999999998644

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.78  E-value=6.4e-17  Score=156.05  Aligned_cols=221  Identities=19%  Similarity=0.169  Sum_probs=149.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHH---HHHHHHHHhcC--------CcEEEEEccCCCHH------
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTEL---NERLQEWKLKG--------LKVTGSVCDLSSRE------   72 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~---~~~~~~l~~~~--------~~~~~~~~Dlsd~~------   72 (367)
                      +|+||||||+||++++++|+++|  ++|+++.|+.+..   +.+.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  7899999986532   22222222111        46889999998753      


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT  152 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~  152 (367)
                      ....+.        ..+|++||||+.....       ..++...++|+.|+.++++.+..    .+..+++++||.+...
T Consensus        81 ~~~~~~--------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~  141 (367)
T TIGR01746        81 EWERLA--------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLA  141 (367)
T ss_pred             HHHHHH--------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccC
Confidence            332222        4699999999975421       12456778999999999888754    3445699999987653


Q ss_pred             CC----------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHh
Q 035642          153 AA----------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLV  215 (367)
Q Consensus       153 ~~----------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~  215 (367)
                      ..                .....|+.||.+.+.+++.++.    .|++++.+.||.+.++....... ............
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~  217 (367)
T TIGR01746       142 AIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCL  217 (367)
T ss_pred             CcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHH
Confidence            31                1134799999999999887654    38999999999998863221111 111111111111


Q ss_pred             --hcCCC-----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          216 --SRTPI-----CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       216 --~~~p~-----~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                        ...|.     ..+.+++|+|++++.++.......+|+.+++.++.
T Consensus       218 ~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       218 ALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             HhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence              11221     12678999999999988544433458888988754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.77  E-value=5e-17  Score=154.50  Aligned_cols=227  Identities=16%  Similarity=0.074  Sum_probs=153.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+++|++|++++|............... ..+.++.+|+++++++.++++.      +++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence            4899999999999999999999999998876543322222222211 2577888999999999988763      57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      +||+||......    ..+...+.+..|+.++.++++++..    .+.+++|++||...+...           .....|
T Consensus        74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999754322    2233456788999999999887643    345799999986543211           123579


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----Chh-hhHHHHHHh-hc---------CCC----
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPA-KNKIVEGLV-SR---------TPI----  220 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~-~~~~~~~~~-~~---------~p~----  220 (367)
                      +.+|++++.+++.++.+.  .++++..+.|+.+.++.......     ... ......... ..         .|.    
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987652  37899999999988874322110     010 000111111 00         111    


Q ss_pred             --CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          221 --CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       221 --~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                        ..+..++|+|++++.++........|+.+++.+|.
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~  260 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQ  260 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCC
Confidence              13577999999999887432222356788886654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.77  E-value=3.1e-17  Score=148.78  Aligned_cols=215  Identities=19%  Similarity=0.211  Sum_probs=159.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      ||||||+|.||.+++++|+++|+.|+...|+...........     ++.++.+|+.|.++++++++..      .+|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence            799999999999999999999999988888766543322221     7889999999999999999864      58999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccHH
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLYG  161 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y~  161 (367)
                      ||+|+.....    ...+.....++.|+.++.++++++...    +..++|++||...+...           .....|+
T Consensus        70 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSNP----ESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSHH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeecccccc----ccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence            9999975311    123456778889999999998888643    34799999996543322           1235699


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCCCCHHHHHHH
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRPGEPDEVSSL  232 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dvA~a  232 (367)
                      .+|...+.+.+.+..+.   ++++..+.|+.+.+|.............+...+....+.         ..+..++|+|++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999999998875   799999999999998721111222222344444444321         124579999999


Q ss_pred             HHHHhCCCCCCccccEEEe
Q 035642          233 VAFLCFPAASYITGQVICV  251 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~v  251 (367)
                      ++.++.  .....|+.++|
T Consensus       219 ~~~~~~--~~~~~~~~yNi  235 (236)
T PF01370_consen  219 IVAALE--NPKAAGGIYNI  235 (236)
T ss_dssp             HHHHHH--HSCTTTEEEEE
T ss_pred             HHHHHh--CCCCCCCEEEe
Confidence            999994  33367888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.77  E-value=3.4e-17  Score=155.98  Aligned_cols=210  Identities=20%  Similarity=0.133  Sum_probs=150.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||+|+||+++++.|+++|++|++++|+.+.....    .  ...+.++.+|++|.+++.+++        ..+|+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~--------~~~d~   67 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAV--------AGCRA   67 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHH--------hCCCE
Confidence            699999999999999999999999999999987653221    1  225778899999999888876        35899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC---------------C
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP---------------L  156 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~---------------~  156 (367)
                      +||+|+....      ..+.++..+++|+.++.++++++..    .+.+++|++||...+...+               .
T Consensus        68 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~  137 (328)
T TIGR03466        68 LFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDM  137 (328)
T ss_pred             EEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCcccc
Confidence            9999985421      1123567889999999999998754    3467999999976553211               1


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-----CCCCCHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-----CRPGEPDEVSS  231 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~~dvA~  231 (367)
                      ...|+.+|.+.+.+++.++.+   .|+++..++|+.+.++.........  ...........|.     ..+..++|+|+
T Consensus       138 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  212 (328)
T TIGR03466       138 IGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTG--RIIVDFLNGKMPAYVDTGLNLVHVDDVAE  212 (328)
T ss_pred             cChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHH--HHHHHHHcCCCceeeCCCcceEEHHHHHH
Confidence            247999999999999998765   3789999999999887532211110  0011111112221     13567999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCC
Q 035642          232 LVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       232 ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      +++.++..   ...|+.+.++|
T Consensus       213 a~~~~~~~---~~~~~~~~~~~  231 (328)
T TIGR03466       213 GHLLALER---GRIGERYILGG  231 (328)
T ss_pred             HHHHHHhC---CCCCceEEecC
Confidence            99888743   23677777754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.77  E-value=1.1e-16  Score=147.50  Aligned_cols=208  Identities=15%  Similarity=0.126  Sum_probs=134.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||||||+||++++++|+++|++|+++.|+.++......    .+.++.++.+|+++. +++.+   .+.    .++|
T Consensus        19 ~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~---~~~----~~~d   87 (251)
T PLN00141         19 TVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVE---AIG----DDSD   87 (251)
T ss_pred             eEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHH---Hhh----cCCC
Confidence            89999999999999999999999999999999876543321    134688899999983 33322   220    2589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc---CCCCCccHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT---AAPLTPLYGPYNGAM  167 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~---~~~~~~~Y~asKaal  167 (367)
                      +||+++|......    .    ...+++|+.++.++++++.    +.+.++||++||...+.   +.+....|.+.|.+.
T Consensus        88 ~vi~~~g~~~~~~----~----~~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~  155 (251)
T PLN00141         88 AVICATGFRRSFD----P----FAPWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFG  155 (251)
T ss_pred             EEEECCCCCcCCC----C----CCceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCcchhHHHHHH
Confidence            9999998642211    0    1124678889988888864    45568999999986432   222334577766544


Q ss_pred             HHHHHHHHHH--hCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          168 NQLTKHLECE--QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       168 ~~l~~~la~e--~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ..+...+..|  +...|++++.|+||++.++.........         ....+...+.+++|+|+.++.++..  ....
T Consensus       156 ~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~---------~~~~~~~~~i~~~dvA~~~~~~~~~--~~~~  224 (251)
T PLN00141        156 LTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME---------PEDTLYEGSISRDQVAEVAVEALLC--PESS  224 (251)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC---------CCCccccCcccHHHHHHHHHHHhcC--hhhc
Confidence            4333222222  3556899999999999876422110000         0001122357999999999999843  2223


Q ss_pred             ccEEEeCC
Q 035642          246 GQVICVDG  253 (367)
Q Consensus       246 G~~i~vdg  253 (367)
                      +..+.+-+
T Consensus       225 ~~~~~~~~  232 (251)
T PLN00141        225 YKVVEIVA  232 (251)
T ss_pred             CcEEEEec
Confidence            44454443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.74  E-value=2.8e-16  Score=151.61  Aligned_cols=218  Identities=14%  Similarity=0.105  Sum_probs=150.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS-SREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dls-d~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.++.....     ....+.++.+|++ +.+.+.+++        .++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--------~~~   69 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV-----NHPRMHFFEGDITINKEWIEYHV--------KKC   69 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc-----cCCCeEEEeCCCCCCHHHHHHHH--------cCC
Confidence            6999999999999999999986 699999998765432211     1235888899998 666665554        358


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---------------  154 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---------------  154 (367)
                      |+|||+|+...+...    .++.+..+++|+.++.++++++..    .+ .++|++||...+...               
T Consensus        70 d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~  140 (347)
T PRK11908         70 DVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYG  140 (347)
T ss_pred             CEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccC
Confidence            999999997543221    223346779999999999888753    33 689999997543210               


Q ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----ChhhhHHHHHHhhcCC-------
Q 035642          155 ---PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPAKNKIVEGLVSRTP-------  219 (367)
Q Consensus       155 ---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~p-------  219 (367)
                         .....|+.||.+.+.+++.++..   .|+++..+.|+.+.+|.......     ..-....+..+....+       
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g  217 (347)
T PRK11908        141 PINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGG  217 (347)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCC
Confidence               01226999999999999998765   37888999999998875432111     1111122323222222       


Q ss_pred             --CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          220 --ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       220 --~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                        ...+..++|+|++++.++........|+.+++.++
T Consensus       218 ~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        218 SQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             ceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence              22478999999999998853322246888999774

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.3e-16  Score=149.22  Aligned_cols=214  Identities=21%  Similarity=0.234  Sum_probs=151.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc-cE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL-NL   91 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i-D~   91 (367)
                      ||||||+|+||.+++++|+++|++|++++|...+.....       ..+.++.+|+++.+.+.+.++        .. |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~--------~~~d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK--------GVPDA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh--------cCCCE
Confidence            899999999999999999999999999999876543322       356788889999866665553        23 99


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCc--
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTP--  158 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~--  158 (367)
                      +||+|+........  .. .....+.+|+.++.++++++..    .+..++|+.||.+...+.           +..+  
T Consensus        68 vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          68 VIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            99999986543211  11 3456889999999999999864    457889997775544322           1111  


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-CC---------CCCCHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-IC---------RPGEPDE  228 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-~~---------~~~~~~d  228 (367)
                      .|+.||.+.|.+++.+..   ..|+.+..+.|+.+.+|......................+ ..         .+..++|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  217 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD  217 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence            499999999999999987   3589999999999988865443111111112222333333 11         2567999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++++++.++....   .+ .+++.++.
T Consensus       218 ~a~~~~~~~~~~~---~~-~~ni~~~~  240 (314)
T COG0451         218 VADALLLALENPD---GG-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHhCCC---Cc-EEEeCCCC
Confidence            9999999994322   23 88887764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=8.3e-16  Score=151.04  Aligned_cols=222  Identities=20%  Similarity=0.173  Sum_probs=178.0

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++ ++|||||+|.||.++++++++.+. ++++.+|++-+......+++..  ..+..++.+|+.|.+.++.+++.     
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-----  323 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-----  323 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc-----
Confidence            44 999999999999999999999997 7999999999999998888764  46788999999999999999874     


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       -++|+|+|.|+.-+-..    -+.+..+.+.+|+.|+.|+++++..    .+..++|.+|+--+..|   ...||+||.
T Consensus       324 -~kvd~VfHAAA~KHVPl----~E~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~P---tNvmGaTKr  391 (588)
T COG1086         324 -HKVDIVFHAAALKHVPL----VEYNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNP---TNVMGATKR  391 (588)
T ss_pred             -CCCceEEEhhhhccCcc----hhcCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCC---chHhhHHHH
Confidence             37999999999754432    2334567789999999999999964    56788999999877655   468999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC--------CCCCCHHHHHHHHHHHh
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI--------CRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~dvA~ai~~L~  237 (367)
                      ..|.++.+++......+-++.++.-|.|-+....      -.+.+.+++.+..|+        +.+.+..|.++.++...
T Consensus       392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS------ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~  465 (588)
T COG1086         392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS------VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAG  465 (588)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEEEecceecCCCC------CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHH
Confidence            9999999999877655789999999998765332      122355556565542        33568899999999877


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      .   -.-+|+.+..|-|-..
T Consensus       466 a---~~~gGeifvldMGepv  482 (588)
T COG1086         466 A---IAKGGEIFVLDMGEPV  482 (588)
T ss_pred             h---hcCCCcEEEEcCCCCe
Confidence            3   2348999999998654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.72  E-value=6e-16  Score=161.45  Aligned_cols=219  Identities=14%  Similarity=0.096  Sum_probs=151.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ-REKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.......   .  ...++.++.+|++|.++ +++++        .++
T Consensus       317 ~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~--~~~~~~~~~gDl~d~~~~l~~~l--------~~~  383 (660)
T PRK08125        317 RVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L--GHPRFHFVEGDISIHSEWIEYHI--------KKC  383 (660)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c--CCCceEEEeccccCcHHHHHHHh--------cCC
Confidence            8999999999999999999986 79999999976533221   1  12357888999998655 34433        358


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---------------  154 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---------------  154 (367)
                      |+|||+|+...+...    .+..+..+++|+.++.++++++...    + .++|++||...+...               
T Consensus       384 D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T PRK08125        384 DVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVG  454 (660)
T ss_pred             CEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCccccccccC
Confidence            999999997654221    1223457789999999999998642    3 689999996433210               


Q ss_pred             C---CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-----CChhhhHHHHHHhhcCC-------
Q 035642          155 P---LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-----HDPAKNKIVEGLVSRTP-------  219 (367)
Q Consensus       155 ~---~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~p-------  219 (367)
                      +   ....|+.||.+.+.+++.++.++   |+++..+.|+.+.+|......     .......++..+....+       
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g  531 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGG  531 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCC
Confidence            0   12369999999999999987663   799999999999988543211     11111223333322222       


Q ss_pred             --CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          220 --ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       220 --~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                        ..-+..++|++++++.++........|+.+++.+|.
T Consensus       532 ~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        532 KQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             ceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence              123678999999998888432223468889988763

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.72  E-value=2.5e-16  Score=154.27  Aligned_cols=205  Identities=14%  Similarity=0.177  Sum_probs=144.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH--HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE--RLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~--~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||||+||++++++|+++|++|++++|+..+...  ..++.......+.++.+|++|++++.++++...    +++
T Consensus        62 kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~----~~~  137 (390)
T PLN02657         62 TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG----DPV  137 (390)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC----CCC
Confidence            89999999999999999999999999999998765421  111121223467889999999999999887531    279


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||++.....     .    ...+++|+.++.++++++.    +.+.+++|++||.....   ....|..+|...+.
T Consensus       138 D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~sK~~~E~  201 (390)
T PLN02657        138 DVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQRAKLKFEA  201 (390)
T ss_pred             cEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHHHHHHHHH
Confidence            9999999853211     1    1235678888888888764    44568999999986543   34568889998887


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC----------CCCCCCHHHHHHHHHHHhCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP----------ICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p----------~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ..+.     ...+++...+.|+.+..++...          ...+....|          ...+.+.+|+|.+++.++.+
T Consensus       202 ~l~~-----~~~gl~~tIlRp~~~~~~~~~~----------~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~  266 (390)
T PLN02657        202 ELQA-----LDSDFTYSIVRPTAFFKSLGGQ----------VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLD  266 (390)
T ss_pred             HHHh-----ccCCCCEEEEccHHHhcccHHH----------HHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhC
Confidence            7654     2358999999998877543211          111111111          11246889999999888743


Q ss_pred             CCCCccccEEEeCC
Q 035642          240 AASYITGQVICVDG  253 (367)
Q Consensus       240 ~~~~itG~~i~vdg  253 (367)
                        ....|+.+++.|
T Consensus       267 --~~~~~~~~~Igg  278 (390)
T PLN02657        267 --ESKINKVLPIGG  278 (390)
T ss_pred             --ccccCCEEEcCC
Confidence              233578888876

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.71  E-value=5.1e-17  Score=150.25  Aligned_cols=220  Identities=19%  Similarity=0.223  Sum_probs=154.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCcE----EEEEccCCCHHHHHHHHHHHHHHc
Q 035642           13 YFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK--GLKV----TGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~--~~~~----~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ||||||+|.||++++++|++.+. .+++++|++.++-.+..++...  +.++    ..+.+|++|.+.+..++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999999999999995 7999999999999998888532  2223    3457799999999999865     


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       .++|+|+|.|+.-+.. +.+.   ...+.+.+|+.|+.++++++..    .+..++|++|+--+..|   ...||+||.
T Consensus        76 -~~pdiVfHaAA~KhVp-l~E~---~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~P---tnvmGatKr  143 (293)
T PF02719_consen   76 -YKPDIVFHAAALKHVP-LMED---NPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNP---TNVMGATKR  143 (293)
T ss_dssp             --T-SEEEE------HH-HHCC---CHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred             -cCCCEEEEChhcCCCC-hHHh---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCC---CcHHHHHHH
Confidence             3799999999975432 2222   3356789999999999999975    45789999999877553   578999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC--------CCCCCHHHHHHHHHHHh
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI--------CRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~dvA~ai~~L~  237 (367)
                      ..|.++.+++...+..+.++.+|.-|.|-..-.      +-.+.+.+++.+..|+        +.+.+++|.++.++..+
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G------SVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~  217 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG------SVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA  217 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT------SCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCC------cHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence            999999999988766779999999998865422      1223356666666553        33578999999998877


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      .-   ...|+.+.+|-|....
T Consensus       218 ~~---~~~geifvl~mg~~v~  235 (293)
T PF02719_consen  218 AL---AKGGEIFVLDMGEPVK  235 (293)
T ss_dssp             HH-----TTEEEEE---TCEE
T ss_pred             hh---CCCCcEEEecCCCCcC
Confidence            32   2369999999887764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.71  E-value=1.7e-15  Score=141.98  Aligned_cols=194  Identities=17%  Similarity=0.138  Sum_probs=136.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||||+||++++++|+++|++|++++|+                     .+|+.+.++++++++.      .++|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence            48999999999999999999999999999885                     3699999999888764      35899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      +||+||......    .....+..+++|+.++.++++++..    .+ .++|++||...+.+           ......|
T Consensus        54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            999999753221    1223456789999999999998753    22 48999999654321           1124579


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-------CCCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-------ICRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~dvA~ai  233 (367)
                      +.+|.+.|.+++.+       +.++..+.|+.+.++....    ..............+       ..-+...+|+|+++
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  193 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGR----NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVI  193 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCC----CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence            99999999988765       4578999999998875311    011112222222211       12345789999999


Q ss_pred             HHHhCCCCCCccccEEEeCCC
Q 035642          234 AFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG  254 (367)
                      ..++..  ....|+.+++.++
T Consensus       194 ~~~~~~--~~~~~~~~ni~~~  212 (287)
T TIGR01214       194 AALLQR--LARARGVYHLANS  212 (287)
T ss_pred             HHHHhh--ccCCCCeEEEECC
Confidence            998843  2223456666543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.70  E-value=2.4e-15  Score=146.49  Aligned_cols=219  Identities=17%  Similarity=0.039  Sum_probs=147.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||||+|+||+++++.|.++|++|++++|.....      +........++.+|+++.+.+.+++        .++
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~   86 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVT--------KGV   86 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHH--------hCC
Confidence            34999999999999999999999999999999864321      1111112467788999988776665        358


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------------  152 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------------  152 (367)
                      |+|||+|+.........   ......+..|+.++.++++++..    .+.+++|++||...+.                 
T Consensus        87 D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~  159 (370)
T PLN02695         87 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDAW  159 (370)
T ss_pred             CEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccCC
Confidence            99999998653222111   11234567899999999998743    3457999999974321                 


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhc-CC---------CC
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSR-TP---------IC  221 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~-~p---------~~  221 (367)
                      +......|+.+|.+.+.+++.++..   .|+++..+.|+.+.+|........ .....+...+... .+         ..
T Consensus       160 p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r  236 (370)
T PLN02695        160 PAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTR  236 (370)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEE
Confidence            1223458999999999999998765   389999999999999853211100 0111122222211 11         12


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .+..++|+++++..++..  .  .++.+++.+|..
T Consensus       237 ~~i~v~D~a~ai~~~~~~--~--~~~~~nv~~~~~  267 (370)
T PLN02695        237 SFTFIDECVEGVLRLTKS--D--FREPVNIGSDEM  267 (370)
T ss_pred             eEEeHHHHHHHHHHHHhc--c--CCCceEecCCCc
Confidence            257899999999987732  2  256778876643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.70  E-value=2.7e-15  Score=156.99  Aligned_cols=222  Identities=11%  Similarity=0.027  Sum_probs=152.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++||||||+|+||++++++|+++  |++|+.++|..  +....+...  ....++.++.+|++|.+.+++++..      
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~------   78 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT------   78 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh------
Confidence            48999999999999999999998  67899888753  222221111  1134688899999999887776532      


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-------------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-------------  153 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-------------  153 (367)
                      .++|+|||+|+......    ..++....+++|+.|+.++++++...   ...+++|++||...+..             
T Consensus        79 ~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~  151 (668)
T PLN02260         79 EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNHEAS  151 (668)
T ss_pred             cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCccccC
Confidence            46999999999754321    22233467789999999999887532   22579999999754321             


Q ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCC
Q 035642          154 -APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRP  223 (367)
Q Consensus       154 -~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~  223 (367)
                       ......|+.||.+.+.+++.++.++   ++++..+.|+.+.+|....   ......+........++         ..+
T Consensus       152 ~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~---~~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP---EKLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCc---ccHHHHHHHHHhCCCCeEEecCCCceEee
Confidence             1124579999999999999887663   7899999999999875321   11111122222222211         135


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ..++|+|+++..++.  .. ..|+.+++.++..
T Consensus       226 ihV~Dva~a~~~~l~--~~-~~~~vyni~~~~~  255 (668)
T PLN02260        226 LYCEDVAEAFEVVLH--KG-EVGHVYNIGTKKE  255 (668)
T ss_pred             EEHHHHHHHHHHHHh--cC-CCCCEEEECCCCe
Confidence            679999999998873  22 2467888877643

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.69  E-value=2.5e-15  Score=142.49  Aligned_cols=215  Identities=13%  Similarity=0.104  Sum_probs=140.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--HcCCCcc
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS--IFQGKLN   90 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~--~~~g~iD   90 (367)
                      ||||||+|+||++++++|+++|++|+++.|+....... ..         ...+|++|..+.+++++++.+  .+ +++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence            79999999999999999999999766665554322111 01         123577776666666555432  22 4799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPL  159 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~  159 (367)
                      +|||+||......   ...   +..++.|+.++.++++++..    .+ .++|++||.+.+...           .+...
T Consensus        71 ~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            9999998643321   121   34689999999999998853    33 379999997543211           12357


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhcC-C---------CCCCCCHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSRT-P---------ICRPGEPDE  228 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~-p---------~~~~~~~~d  228 (367)
                      |+.||.+.+.+++.++.+   .++++..+.|+.+.+|......... ........+.... +         ..-+..++|
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            999999999999988765   3789999999999987542211100 1111112222221 1         123568999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|++++.++..  .  .|..+++.+|..
T Consensus       217 ~a~a~~~~~~~--~--~~~~yni~~~~~  240 (308)
T PRK11150        217 VAAVNLWFWEN--G--VSGIFNCGTGRA  240 (308)
T ss_pred             HHHHHHHHHhc--C--CCCeEEcCCCCc
Confidence            99999888742  2  245888877754

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.69  E-value=3.2e-15  Score=141.72  Aligned_cols=218  Identities=13%  Similarity=0.065  Sum_probs=144.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ||||||+|+||.+++++|.++|+ .|++++|..... .. ..+   .  ...+..|+++.+.++.+.+.   .+ +++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~---~--~~~~~~d~~~~~~~~~~~~~---~~-~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL---A--DLVIADYIDKEDFLDRLEKG---AF-GKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh---h--heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence            68999999999999999999998 788887764321 11 111   1  12455688888777666543   23 57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      |||+|+....      ..++.+..+++|+.++.++++++..    .+ .++|++||...+..           ......|
T Consensus        70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996432      2234567889999999999998754    22 47999999754321           1135679


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCC---------------CCCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTP---------------ICRPG  224 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p---------------~~~~~  224 (367)
                      +.||.+.+.+++....+.. .++++..+.|+.+.++........ .........+....+               ..-+.
T Consensus       139 ~~sK~~~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPEA-LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHHHhHhhc-cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            9999999999987543322 257889999999988753211110 111112222222111               12367


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ..+|+++++..++..    ..+..+++.++...
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~  246 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRAR  246 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCCc
Confidence            899999999998843    24568888776543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=3.8e-15  Score=135.96  Aligned_cols=220  Identities=16%  Similarity=0.126  Sum_probs=147.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|.||+|++.+|++.|++|++++.-...-.+.....     ...+++.|+.|.+.+++++++      .++|.
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~------~~ida   70 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEE------NKIDA   70 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHh------cCCCE
Confidence            6999999999999999999999999999988665443333321     157899999999999999986      57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC------------CCcc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP------------LTPL  159 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~------------~~~~  159 (367)
                      |||.||...-+-    +.+.--+.++.|+.|+..+++++..    .+..+|||-|| ++.++.|            ....
T Consensus        71 ViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~----~gv~~~vFSSt-AavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          71 VVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQ----TGVKKFIFSST-AAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             EEECccccccch----hhhCHHHHHhhchHhHHHHHHHHHH----hCCCEEEEecc-hhhcCCCCCcccCCCCCCCCCCc
Confidence            999999754332    5555667889999999999888754    45667877555 4444433            3458


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC-----CccccccCChh-hhHHHHHHhhc----------------
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT-----SLSDAIRHDPA-KNKIVEGLVSR----------------  217 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t-----~~~~~~~~~~~-~~~~~~~~~~~----------------  217 (367)
                      |+.||...|.+.+.+++..   ++++..+.=-.+.+     .+.+.-..... .+-..+....+                
T Consensus       142 YG~sKlm~E~iL~d~~~a~---~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DG  218 (329)
T COG1087         142 YGRSKLMSEEILRDAAKAN---PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDG  218 (329)
T ss_pred             chhHHHHHHHHHHHHHHhC---CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCC
Confidence            9999999999999999875   45555554222211     11111111111 11111211111                


Q ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCCCcccc--EEEeCCCcc
Q 035642          218 TPICRPGEPDEVSSLVAFLCFPAASYITGQ--VICVDGGMT  256 (367)
Q Consensus       218 ~p~~~~~~~~dvA~ai~~L~s~~~~~itG~--~i~vdgG~~  256 (367)
                      +..+.+..+.|.|++++..+.--..  .|+  .+++..|..
T Consensus       219 T~iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G  257 (329)
T COG1087         219 TCIRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNG  257 (329)
T ss_pred             CeeeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCc
Confidence            2234456799999999987732121  444  677766643

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.67  E-value=2.2e-15  Score=143.72  Aligned_cols=205  Identities=13%  Similarity=0.067  Sum_probs=137.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+||||||.||++++++|+++|++|++++|+.++....    ..  ..+.++.+|++|++++.+++        .++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al--------~g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--WGAELVYGDLSLPETLPPSF--------KGVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHH--------CCCCE
Confidence            699999999999999999999999999999987554222    11  24778899999999988777        35899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      |||+++....         +.....++|+.++.++++++.    +.+..++|++||..+..  .+...|..+|...+.+.
T Consensus        68 Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         68 IIDASTSRPS---------DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             EEECCCCCCC---------CccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc--cCCChHHHHHHHHHHHH
Confidence            9998764321         112355678899998888774    34567999999964421  12356888998887765


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC  250 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~  250 (367)
                      +.       .|++++.+.|+.+...+...... +.......... ...+ ..+.+++|+|+++..++..  ....|+.++
T Consensus       133 ~~-------~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~l~~--~~~~~~~~n  201 (317)
T CHL00194        133 KK-------SGIPYTIFRLAGFFQGLISQYAI-PILEKQPIWITNESTP-ISYIDTQDAAKFCLKSLSL--PETKNKTFP  201 (317)
T ss_pred             HH-------cCCCeEEEeecHHhhhhhhhhhh-hhccCCceEecCCCCc-cCccCHHHHHHHHHHHhcC--ccccCcEEE
Confidence            32       47888999998654332211000 00000000000 0111 1346789999999988843  333688999


Q ss_pred             eCCCcc
Q 035642          251 VDGGMT  256 (367)
Q Consensus       251 vdgG~~  256 (367)
                      +.|+..
T Consensus       202 i~g~~~  207 (317)
T CHL00194        202 LVGPKS  207 (317)
T ss_pred             ecCCCc
Confidence            988754

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.66  E-value=9.8e-15  Score=145.09  Aligned_cols=212  Identities=12%  Similarity=0.048  Sum_probs=142.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~-~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+|+||++++++|+++|++|++++|..... +.....+  ...++.++..|+.++.     +        ..+|
T Consensus       121 kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l--------~~~D  185 (442)
T PLN02206        121 RVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L--------LEVD  185 (442)
T ss_pred             EEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h--------cCCC
Confidence            899999999999999999999999999998753321 1111111  1235777888987652     1        3489


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------------C
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------------A  154 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------------~  154 (367)
                      +|||+|+...+...    .++....+++|+.++.++++++..    .+ .++|++||...+..                .
T Consensus       186 ~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~  256 (442)
T PLN02206        186 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPI  256 (442)
T ss_pred             EEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccccccCCCC
Confidence            99999997543211    112356789999999999998854    23 48999999764421                1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRPGE  225 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~  225 (367)
                      .....|+.||.+.+.+++.+....   ++++..+.|+.+.+|...... ......++.......+.         .-+..
T Consensus       257 ~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~-~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~  332 (442)
T PLN02206        257 GVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVYGDGKQTRSFQF  332 (442)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccc-cchHHHHHHHHHcCCCcEEeCCCCEEEeEEe
Confidence            113579999999999998876653   789999999999887532111 11111233333222221         12577


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          226 PDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++|+|++++.++.  .. ..| .+++.+|.
T Consensus       333 V~Dva~ai~~a~e--~~-~~g-~yNIgs~~  358 (442)
T PLN02206        333 VSDLVEGLMRLME--GE-HVG-PFNLGNPG  358 (442)
T ss_pred             HHHHHHHHHHHHh--cC-CCc-eEEEcCCC
Confidence            9999999998873  22 234 78887664

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.66  E-value=7.3e-15  Score=138.74  Aligned_cols=204  Identities=17%  Similarity=0.160  Sum_probs=138.6

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Q 035642           14 FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLV   93 (367)
Q Consensus        14 LVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI   93 (367)
                      |||||||+||.++++.|+++|+.|+++.+..                    .+|+++.++++++++.      .++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------------~~Dl~~~~~l~~~~~~------~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------------ELDLTRQADVEAFFAK------EKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------------cCCCCCHHHHHHHHhc------cCCCEEE
Confidence            6999999999999999999999877664321                    3699999998888765      3589999


Q ss_pred             EcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------------C---CC
Q 035642           94 NNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------------P---LT  157 (367)
Q Consensus        94 ~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------------~---~~  157 (367)
                      |+|+.......   ..+.....+++|+.++.++++++..    .+.+++|++||...+.+.             +   ..
T Consensus        55 h~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99997432110   1122345678999999999998854    345789999996543211             1   12


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHH----hhc----------CCCCC
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGL----VSR----------TPICR  222 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~----~~~----------~p~~~  222 (367)
                      ..|+.||.+.+.+++.+..+.   ++++..+.|+.+.++....... .......+..+    ...          .+...
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            249999999999998887664   7899999999999885321110 00111122111    111          11235


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +..++|++++++.++...   ..+..+++.+|..
T Consensus       205 ~i~v~Dv~~~~~~~~~~~---~~~~~~ni~~~~~  235 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRY---SGAEHVNVGSGDE  235 (306)
T ss_pred             cccHHHHHHHHHHHHhcc---ccCcceEeCCCCc
Confidence            788999999999988432   1334567766644

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.64  E-value=3e-14  Score=141.36  Aligned_cols=214  Identities=12%  Similarity=0.028  Sum_probs=143.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+||||+|+||++++++|+++|++|++++|...........+. ...++.++..|+.+..     +        .++|+
T Consensus       122 kILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~--------~~~D~  187 (436)
T PLN02166        122 RIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L--------LEVDQ  187 (436)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c--------cCCCE
Confidence            89999999999999999999999999999986422111111111 1235777888886542     1        35899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------------CC
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------------AP  155 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------------~~  155 (367)
                      |||+|+........    .+-...+++|+.|+.++++++...    + .++|++||.+.+..                ..
T Consensus       188 ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~  258 (436)
T PLN02166        188 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  258 (436)
T ss_pred             EEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCCCCC
Confidence            99999975432211    123577899999999999988543    2 48999999754321                11


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCCCCH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRPGEP  226 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~  226 (367)
                      ....|+.||.+.+.+++.+...   .++++..+.|+.+.+|..... .......++..+....+.         .-+..+
T Consensus       259 p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~-~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V  334 (436)
T PLN02166        259 ERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYV  334 (436)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCC-ccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEH
Confidence            2346999999999999988765   378999999999988753211 111111233333333221         235789


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|+++++..++.  .. . +..+++.+|..
T Consensus       335 ~Dva~ai~~~~~--~~-~-~giyNIgs~~~  360 (436)
T PLN02166        335 SDLVDGLVALME--GE-H-VGPFNLGNPGE  360 (436)
T ss_pred             HHHHHHHHHHHh--cC-C-CceEEeCCCCc
Confidence            999999998873  22 2 34788866543

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.63  E-value=1.4e-14  Score=136.97  Aligned_cols=146  Identities=18%  Similarity=0.150  Sum_probs=109.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+++| +|+.++|...                 .+..|++|.+++.++++.      .++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCCE
Confidence            59999999999999999999999 7888887531                 234699999999888764      25899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      |||+|+......    ..++-+..+.+|+.++.++++++...    + .++|++||..-+.+           ..+...|
T Consensus        58 Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         58 IVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             EEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            999999764321    12223456789999999999988542    2 47999999643321           1133579


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCc
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSL  197 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~  197 (367)
                      +.||.+.|.+++.+..       +...+.|+++.+|.
T Consensus       129 g~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        129 GETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            9999999998876532       34778899998874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.3e-13  Score=144.01  Aligned_cols=219  Identities=20%  Similarity=0.175  Sum_probs=142.9

Q ss_pred             eEEEEcCCChhHHHHHHHHH--HCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHH--HHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQR--EKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~--~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv--~~~~~~~~~~~~   86 (367)
                      +||||||||+||++++++|+  ++|++|++++|+... ..........+ .++.++.+|++|++..  .+..+++     
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-----
Confidence            69999999999999999999  589999999997532 22222111112 4688899999985310  1122222     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------  154 (367)
                      .++|+|||+||......    +   ......+|+.|+.++++++..    .+..++|++||...+...            
T Consensus        76 ~~~D~Vih~Aa~~~~~~----~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         76 GDIDHVVHLAAIYDLTA----D---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             cCCCEEEECceeecCCC----C---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchhh
Confidence            36899999999753321    2   245668999999999888743    346789999997654211            


Q ss_pred             -CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC----hhhhHHHHHHhh---cCCC------
Q 035642          155 -PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD----PAKNKIVEGLVS---RTPI------  220 (367)
Q Consensus       155 -~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~----~~~~~~~~~~~~---~~p~------  220 (367)
                       .....|+.||...|.+.+.      ..|+++..+.|+.+.++........    ......+..+..   ..+.      
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence             1124699999999998763      2479999999999987642211000    000011111111   0111      


Q ss_pred             -CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          221 -CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       221 -~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                       ..+..++|+++++..++.  .....|+.+++.++.
T Consensus       219 ~~~~v~vddva~ai~~~~~--~~~~~g~~~ni~~~~  252 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMH--KDGRDGQTFHLTDPK  252 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhc--CcCCCCCEEEeCCCC
Confidence             124568999999999884  344578999997764

>PRK05865 hypothetical protein; Provisional

Probab=99.56  E-value=3.1e-13  Score=142.10  Aligned_cols=179  Identities=17%  Similarity=0.181  Sum_probs=129.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||+|+||++++++|+++|++|++++|+....      .   ...+.++.+|++|.+++.++++        .+|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCCE
Confidence            599999999999999999999999999999975321      1   1257788999999999888773        5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      |||+|+....             .+++|+.++.++++++.    +.+.++||++||..              |.+.+.++
T Consensus        65 VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS~~--------------K~aaE~ll  113 (854)
T PRK05865         65 VAHCAWVRGR-------------NDHINIDGTANVLKAMA----ETGTGRIVFTSSGH--------------QPRVEQML  113 (854)
T ss_pred             EEECCCcccc-------------hHHHHHHHHHHHHHHHH----HcCCCeEEEECCcH--------------HHHHHHHH
Confidence            9999985321             35789999988877653    45567999999963              87777766


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh--cCCCC------CCCCHHHHHHHHHHHhCCCCCC
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPIC------RPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~~------~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      +.       .|+++..+.|+.+.+|....         ....+..  ..+.+      .+..++|+|+++..++..  ..
T Consensus       114 ~~-------~gl~~vILRp~~VYGP~~~~---------~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~--~~  175 (854)
T PRK05865        114 AD-------CGLEWVAVRCALIFGRNVDN---------WVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLD--TV  175 (854)
T ss_pred             HH-------cCCCEEEEEeceEeCCChHH---------HHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhC--CC
Confidence            32       37999999999999874211         1111111  11111      367899999999988732  22


Q ss_pred             ccccEEEeCCCcc
Q 035642          244 ITGQVICVDGGMT  256 (367)
Q Consensus       244 itG~~i~vdgG~~  256 (367)
                      ..|..+++.+|..
T Consensus       176 ~~ggvyNIgsg~~  188 (854)
T PRK05865        176 IDSGPVNLAAPGE  188 (854)
T ss_pred             cCCCeEEEECCCc
Confidence            2456788876653

>PLN02996 fatty acyl-CoA reductase

Probab=99.55  E-value=5.4e-13  Score=134.34  Aligned_cols=221  Identities=15%  Similarity=0.111  Sum_probs=144.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhH---HHHHHHHH---------Hh-c--------CCcEEEEEc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTE---LNERLQEW---------KL-K--------GLKVTGSVC   66 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~---~~~~~~~l---------~~-~--------~~~~~~~~~   66 (367)
                      ++|+||||||+||.+++++|++.+.   +|++..|....   .+.+..++         .+ .        ..++.++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            3999999999999999999998653   67888886531   11111111         11 0        147899999


Q ss_pred             cCCC-------HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC
Q 035642           67 DLSS-------REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN  139 (367)
Q Consensus        67 Dlsd-------~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~  139 (367)
                      |+++       .+.+++++        ..+|+|||+|+.....       +..+..+.+|+.|+.++++++...   .+.
T Consensus        92 Dl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~  153 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---VKV  153 (491)
T ss_pred             ccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---CCC
Confidence            9984       33344444        3589999999976421       235678899999999999988542   234


Q ss_pred             CEEEEecCcccccCCC--------------------------------------------------------------CC
Q 035642          140 GIIVFISSVAGVTAAP--------------------------------------------------------------LT  157 (367)
Q Consensus       140 g~IV~iSS~~~~~~~~--------------------------------------------------------------~~  157 (367)
                      .++|++||...+....                                                              ..
T Consensus       154 k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (491)
T PLN02996        154 KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWP  233 (491)
T ss_pred             CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCC
Confidence            6899999876432100                                                              11


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh----hhHHHHHHhhcCC---------CCCCC
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGLVSRTP---------ICRPG  224 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~p---------~~~~~  224 (367)
                      ..|+.||++.|.+++..+     .++.+..+.|+.|.++........-.    .......+....+         ..-+.
T Consensus       234 n~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v  308 (491)
T PLN02996        234 NTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVI  308 (491)
T ss_pred             CchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeeccee
Confidence            359999999999997653     27999999999998876543222111    0111111122211         23457


Q ss_pred             CHHHHHHHHHHHhCCCC-CCccccEEEeCCC
Q 035642          225 EPDEVSSLVAFLCFPAA-SYITGQVICVDGG  254 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~-~~itG~~i~vdgG  254 (367)
                      .++|++++++.++.... ....|.++++.+|
T Consensus       309 ~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        309 PADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            89999999988774321 1124678888877

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.55  E-value=2.3e-13  Score=118.96  Aligned_cols=172  Identities=15%  Similarity=0.148  Sum_probs=123.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.++        ..++.++.+|+.|++++.+++        .+.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence            7899999999999999999999999999999987765        457999999999998888877        569999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC---------ccHHHH
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT---------PLYGPY  163 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~---------~~Y~as  163 (367)
                      |+++|....        +             ...++.+...+++.+..++|++||.......+..         ..|...
T Consensus        65 i~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   65 IHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             EECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            999975422        1             3334444555556677899999998766543331         256666


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      |...+.+.+       ..+++...++||++.++..........         .........+.+|+|++++.++
T Consensus       124 ~~~~e~~~~-------~~~~~~~ivrp~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  124 KREAEEALR-------ESGLNWTIVRPGWIYGNPSRSYRLIKE---------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHHH-------HSTSEEEEEEESEEEBTTSSSEEEESS---------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-------hcCCCEEEEECcEeEeCCCcceeEEec---------cCCCCcCcCCHHHHHHHHHHHh
Confidence            665554442       238999999999987765321100000         0111124568999999998876

...

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.50  E-value=9.7e-13  Score=125.31  Aligned_cols=224  Identities=18%  Similarity=0.188  Sum_probs=152.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||+|++|++++++|+++|  ..|.+++.....-.-..+........+.++.+|+.|..++...++        +.
T Consensus         6 ~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~--------~~   77 (361)
T KOG1430|consen    6 SVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ--------GA   77 (361)
T ss_pred             EEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc--------Cc
Confidence            99999999999999999999999  689999887642111111111135678999999999999888874        45


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC------------CCC-
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA------------APL-  156 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~------------~~~-  156 (367)
                       .++|+|+...+.-    -..+-+..+++|+.|+.+++.++.    +.+..++|++||..-..+            .|. 
T Consensus        78 -~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~----~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~  148 (361)
T KOG1430|consen   78 -VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACK----ELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLK  148 (361)
T ss_pred             -eEEEeccccCccc----cccchhhheeecchhHHHHHHHHH----HhCCCEEEEecCceEEeCCeecccCCCCCCCccc
Confidence             6666666543321    122456788999999999988875    456789999999765432            222 


Q ss_pred             -CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC---C------CCCCCCH
Q 035642          157 -TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT---P------ICRPGEP  226 (367)
Q Consensus       157 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---p------~~~~~~~  226 (367)
                       ...|+.||+-.|.+++....   ..++...++.|..|.+|.-....+.     ..+.+....   .      ...+...
T Consensus       149 ~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~-----i~~~~~~g~~~f~~g~~~~~~~~~~~  220 (361)
T KOG1430|consen  149 HIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPK-----IVEALKNGGFLFKIGDGENLNDFTYG  220 (361)
T ss_pred             cccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHH-----HHHHHHccCceEEeeccccccceEEe
Confidence             24899999999999887664   3468899999999999865443221     111111111   0      1112233


Q ss_pred             HHHHHHHHHH---hCCCCCCccccEEEeCCCccccCC
Q 035642          227 DEVSSLVAFL---CFPAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       227 ~dvA~ai~~L---~s~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      +-+|.+++..   +.+.+..++||.+.+..|...+.+
T Consensus       221 ~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~  257 (361)
T KOG1430|consen  221 ENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFF  257 (361)
T ss_pred             chhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhh
Confidence            4455544432   223677889999999988776644

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.48  E-value=4.8e-13  Score=123.24  Aligned_cols=158  Identities=21%  Similarity=0.222  Sum_probs=99.9

Q ss_pred             EEcCCChhHHHHHHHHHHCCC--EEEEEeCChhH---HHHHHHHHH----------hcCCcEEEEEccCCCHH------H
Q 035642           15 ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTE---LNERLQEWK----------LKGLKVTGSVCDLSSRE------Q   73 (367)
Q Consensus        15 VTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~---~~~~~~~l~----------~~~~~~~~~~~Dlsd~~------s   73 (367)
                      ||||||+||.++.++|++.+.  +|++..|..+.   .+.+.+.+.          ....++.++.+|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  89999998643   222222221          12568999999999864      3


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA  153 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~  153 (367)
                      .+.+.        ..+|++||+|+......       .+++..++|+.|+.++++.+..    .+..+++++|| +...+
T Consensus        81 ~~~L~--------~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iST-a~v~~  140 (249)
T PF07993_consen   81 YQELA--------EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYIST-AYVAG  140 (249)
T ss_dssp             HHHHH--------HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEE-GGGTT
T ss_pred             hhccc--------cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh----ccCcceEEecc-ccccC
Confidence            33333        35899999999764321       3345778999999999998852    33348999999 32211


Q ss_pred             C---------------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 035642          154 A---------------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT  195 (367)
Q Consensus       154 ~---------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t  195 (367)
                      .                     .....|..||...|.+.+..+.+.   |+.+..+.||.+.+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            1                     112479999999999999988763   78999999999977

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.47  E-value=1.5e-12  Score=120.27  Aligned_cols=154  Identities=23%  Similarity=0.212  Sum_probs=118.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT----ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~----~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++||||||+|.||.|++.+|+++|+.|++++.-..    .+....+ +...+..+.++..|++|.+.++++++..     
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~-l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQ-LLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHH-hcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            38999999999999999999999999999875432    2322222 2222578999999999999999999863     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------CCC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------AAP  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------~~~  155 (367)
                       ++|.|+|-|+....+.    +.+........|+.|+++++..+..+    +...+|+.||..-+-           +..
T Consensus        77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssatvYG~p~~ip~te~~~t~  147 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSATVYGLPTKVPITEEDPTD  147 (343)
T ss_pred             -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHc----CCceEEEecceeeecCcceeeccCcCCCC
Confidence             5999999999865433    33444677889999999998887654    367899988865432           111


Q ss_pred             -CCccHHHHHHHHHHHHHHHHHHhC
Q 035642          156 -LTPLYGPYNGAMNQLTKHLECEQA  179 (367)
Q Consensus       156 -~~~~Y~asKaal~~l~~~la~e~~  179 (367)
                       +...|+.+|.+++...+.+..-+.
T Consensus       148 ~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  148 QPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCcchhhhHHHHHHHHhhhcccc
Confidence             456899999999999999887653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.46  E-value=2.8e-11  Score=100.85  Aligned_cols=217  Identities=18%  Similarity=0.149  Sum_probs=156.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~   88 (367)
                      .++|+|-||-|.+|.++++.|.+++|-|.-++-++..-          ...-..+..|-+=.++-+.+++++-+.++ .+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----------ccceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            35899999999999999999999999998887665321          11122333444444566666766665553 37


Q ss_pred             ccEEEEcCCCCCCCCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|.+++.||....+.... .-..+-+-++.-.+.......+.+..+++.  +|-.-.++.-++..+.|++..|+.+|+|+
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAV  150 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAV  150 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHH
Confidence            999999999865443221 112233444555555555555556666533  57777888888899999999999999999


Q ss_pred             HHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          168 NQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       168 ~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ..++++|+.+-.  +.|--+.+|-|-..+|||.+++.+..+             +..+...+.+++..+....+.++--+
T Consensus       151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD-------------fssWTPL~fi~e~flkWtt~~~RPss  217 (236)
T KOG4022|consen  151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD-------------FSSWTPLSFISEHFLKWTTETSRPSS  217 (236)
T ss_pred             HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc-------------ccCcccHHHHHHHHHHHhccCCCCCC
Confidence            999999998754  457788899999999999998766533             23455668899988888887788888


Q ss_pred             ccEEEe
Q 035642          246 GQVICV  251 (367)
Q Consensus       246 G~~i~v  251 (367)
                      |..+.+
T Consensus       218 GsLlqi  223 (236)
T KOG4022|consen  218 GSLLQI  223 (236)
T ss_pred             CceEEE
Confidence            887766

>PLN02778 3,5-epimerase/4-reductase

Probab=99.44  E-value=2.9e-11  Score=114.43  Aligned_cols=193  Identities=16%  Similarity=0.113  Sum_probs=118.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++|||||+|+||++++++|+++|++|+...                        .|+.+.+.+...++.      .++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence            34899999999999999999999999986432                        245555555555442      358


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------------  152 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------------  152 (367)
                      |+|||+||....... +...++-...+++|+.|+.++++++...    +..+ +++||...+.                 
T Consensus        59 D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~~-v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         59 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER----GLVL-TNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             CEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCE-EEEecceEeCCCCCCCcccCCCCCcCC
Confidence            999999997643211 1122344678899999999999998643    3334 4444432110                 


Q ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---C-CCCCCHH
Q 035642          153 -AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---I-CRPGEPD  227 (367)
Q Consensus       153 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---~-~~~~~~~  227 (367)
                       +.+....|+.||.+.|.+++.++..   .++|+     ++...+-.    ...  ..++..+....+   . +.+...+
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~----~~~--~~fi~~~~~~~~~~~~~~s~~yv~  198 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL----SNP--RNFITKITRYEKVVNIPNSMTILD  198 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc----ccH--HHHHHHHHcCCCeeEcCCCCEEHH
Confidence             0112357999999999999886532   24443     22221100    000  012333332222   2 2367899


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      |++++++.++..  . .+| .+++.+|..
T Consensus       199 D~v~al~~~l~~--~-~~g-~yNigs~~~  223 (298)
T PLN02778        199 ELLPISIEMAKR--N-LTG-IYNFTNPGV  223 (298)
T ss_pred             HHHHHHHHHHhC--C-CCC-eEEeCCCCc
Confidence            999999998832  2 234 888866543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.42  E-value=2.7e-12  Score=120.74  Aligned_cols=196  Identities=17%  Similarity=0.146  Sum_probs=126.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|.||.++++.|.++|+.|+.+.|+                     .+|++|.+++.+++++.      ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCCe
Confidence            69999999999999999999999999999877                     46999999999998764      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      |||+||......    ..++-+..+.+|+.++.++.+.+..     .+.++|++||..-+.+.           .+...|
T Consensus        55 Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   55 VINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             EEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             EeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            999999753221    2334567889999999999998853     24789999997544332           124689


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-------CCCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-------ICRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~dvA~ai  233 (367)
                      +.+|...|...+...    +   +...+.++++.++...     .-...+.+.+....+       .......+|+|+.+
T Consensus       126 G~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~-----~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i  193 (286)
T PF04321_consen  126 GRSKLEGEQAVRAAC----P---NALILRTSWVYGPSGR-----NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVI  193 (286)
T ss_dssp             HHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSS-----SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc----C---CEEEEecceecccCCC-----chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHH
Confidence            999999999888732    2   5577888998877211     111123333332221       22345799999999


Q ss_pred             HHHhCCCCC-CccccEEEeCCCc
Q 035642          234 AFLCFPAAS-YITGQVICVDGGM  255 (367)
Q Consensus       234 ~~L~s~~~~-~itG~~i~vdgG~  255 (367)
                      ..++..... .-.+.++.+.|.-
T Consensus       194 ~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  194 LELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHH-GGG-EEEE---BS
T ss_pred             HHHHHhcccccccceeEEEecCc
Confidence            999832211 1124577776654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.40  E-value=4.3e-11  Score=135.04  Aligned_cols=221  Identities=17%  Similarity=0.197  Sum_probs=143.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC----CEEEEEeCChhHHH---HHHHHHHhc-------CCcEEEEEccCCCH-----
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFG----AIIHTCSRNQTELN---ERLQEWKLK-------GLKVTGSVCDLSSR-----   71 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G----~~Vi~~~R~~~~~~---~~~~~l~~~-------~~~~~~~~~Dlsd~-----   71 (367)
                      ++|+||||+|+||.+++++|+++|    ++|+...|+.....   .+.+.+...       ..++.++.+|++++     
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            389999999999999999999987    78999999754332   222222111       13688899999854     


Q ss_pred             -HHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           72 -EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        72 -~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                       +...++.        ..+|++||||+.....    .+   +.....+|+.|+.++++.+..    .+..+++++||.+.
T Consensus      1052 ~~~~~~l~--------~~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1052 DEKWSDLT--------NEVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSA 1112 (1389)
T ss_pred             HHHHHHHH--------hcCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeee
Confidence             2333222        4689999999975421    12   334456899999999988743    34568999999755


Q ss_pred             ccC-----------------C-----------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc
Q 035642          151 VTA-----------------A-----------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR  202 (367)
Q Consensus       151 ~~~-----------------~-----------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~  202 (367)
                      +..                 .           .....|+.||.+.+.+++..+.    .|+++..+.||.+.++......
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~ 1188 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGAT 1188 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCC
Confidence            411                 0           0124599999999999987643    3899999999999887433221


Q ss_pred             CC-hhhhHHHHHHh--hcCCC----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          203 HD-PAKNKIVEGLV--SRTPI----CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       203 ~~-~~~~~~~~~~~--~~~p~----~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                      .. ...........  ...|.    .-+..++++|++++.++........+..+++.++
T Consensus      1189 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1189 NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH 1247 (1389)
T ss_pred             CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC
Confidence            11 11111111111  11221    2366799999999998753322223456666655

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.40  E-value=6.6e-12  Score=117.71  Aligned_cols=194  Identities=12%  Similarity=0.090  Sum_probs=118.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC-cc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK-LN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~-iD   90 (367)
                      +++||||||.||++++++|+++|++|.+.+|+.++..         ...+..+.+|+.|++++.++++... .. .. +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~~-~~-~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSDD-GM-EPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhccc-Cc-CCcee
Confidence            4899999999999999999999999999999986532         1234556789999999999886432 22 34 99


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      .++++++...       ..  .+        ..    +.+++.+++.+..+||++||.....+.       .++...+.+
T Consensus        70 ~v~~~~~~~~-------~~--~~--------~~----~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~  121 (285)
T TIGR03649        70 AVYLVAPPIP-------DL--AP--------PM----IKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHAH  121 (285)
T ss_pred             EEEEeCCCCC-------Ch--hH--------HH----HHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHHH
Confidence            9999887421       00  00        11    223334455677899999986543221       122222222


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChh--hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA--KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      .+.      ..|+....+.|+++..++.........  ......  ........+.+++|+|+++..++.+.  ...|+.
T Consensus       122 l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~v~~~Dva~~~~~~l~~~--~~~~~~  191 (285)
T TIGR03649       122 LDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYS--ATGDGKIPFVSADDIARVAYRALTDK--VAPNTD  191 (285)
T ss_pred             HHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEe--cCCCCccCcccHHHHHHHHHHHhcCC--CcCCCe
Confidence            221      138999999999877554221100000  000000  00011123779999999999988543  224555


Q ss_pred             EEeCCC
Q 035642          249 ICVDGG  254 (367)
Q Consensus       249 i~vdgG  254 (367)
                      +.+.|+
T Consensus       192 ~~l~g~  197 (285)
T TIGR03649       192 YVVLGP  197 (285)
T ss_pred             EEeeCC
Confidence            666554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.37  E-value=3.4e-11  Score=112.74  Aligned_cols=206  Identities=14%  Similarity=0.111  Sum_probs=117.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      ||||||+|+||.++++.|+++|++|++++|+.++.....        ...  ..|+.. ...       .+.+ .++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~~-------~~~~-~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LAE-------SEAL-EGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cch-------hhhc-CCCCEE
Confidence            689999999999999999999999999999876532211        001  112222 111       1223 569999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC--CEEEEecCcccccCC-----------C-CCc
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN--GIIVFISSVAGVTAA-----------P-LTP  158 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~--g~IV~iSS~~~~~~~-----------~-~~~  158 (367)
                      ||+||.....  .....+..+..+++|+.++.++++++..    .+.  ..+|+.||.. ..+.           + ...
T Consensus        62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~  134 (292)
T TIGR01777        62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDD  134 (292)
T ss_pred             EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCC
Confidence            9999964321  1124455667889999999999888754    222  2344444432 2211           1 111


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-----hcCCCCCCCCHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-----SRTPICRPGEPDEVSSLV  233 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~dvA~ai  233 (367)
                      .|+..+...+...+.    ....++.+..+.|+.+.++.....   ...........     ......-+..++|+|+++
T Consensus       135 ~~~~~~~~~e~~~~~----~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i  207 (292)
T TIGR01777       135 FLAELCRDWEEAAQA----AEDLGTRVVLLRTGIVLGPKGGAL---AKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLI  207 (292)
T ss_pred             hHHHHHHHHHHHhhh----chhcCCceEEEeeeeEECCCcchh---HHHHHHHhcCcccccCCCCcccccEeHHHHHHHH
Confidence            233333333333222    223479999999999988742110   00000011000     011123467899999999


Q ss_pred             HHHhCCCCCCccccEEEeCCC
Q 035642          234 AFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG  254 (367)
                      ..++.  .....| .+++.++
T Consensus       208 ~~~l~--~~~~~g-~~~~~~~  225 (292)
T TIGR01777       208 LFALE--NASISG-PVNATAP  225 (292)
T ss_pred             HHHhc--CcccCC-ceEecCC
Confidence            99984  222234 5555544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.37  E-value=1.4e-10  Score=107.90  Aligned_cols=250  Identities=14%  Similarity=0.107  Sum_probs=179.1

Q ss_pred             eEEEEcC-CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC---
Q 035642           12 NYFITGG-TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG---   87 (367)
Q Consensus        12 ~vLVTGa-s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g---   87 (367)
                      +|+|.|. +.-|++.+|..|-++|+.|+++..+.+..+...++-   ...+.....|..++.++...+.+..+.+..   
T Consensus         5 vVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    5 VVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV   81 (299)
T ss_pred             EEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence            8999995 799999999999999999999999987665554442   334666777887777777777776665421   


Q ss_pred             ----------CccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc---CCCCEEEEecCcccccC
Q 035642           88 ----------KLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA---SGNGIIVFISSVAGVTA  153 (367)
Q Consensus        88 ----------~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~---~~~g~IV~iSS~~~~~~  153 (367)
                                .+..||...... ..++++.++.+.|.+.++.|+..++.+++.++|+++.   ++..-|++.-|..+...
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                      355666665543 4578889999999999999999999999999999987   44444555668878888


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc--------cCCh-----hhh------HHHHHH
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI--------RHDP-----AKN------KIVEGL  214 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~--------~~~~-----~~~------~~~~~~  214 (367)
                      .|..+.-+....++.+|+..|++|+.+.||+|..+.-|.++-......        ....     ...      ......
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~~~~  241 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYSSIQ  241 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHHHHH
Confidence            888999999999999999999999999999999999988764411100        0000     000      011111


Q ss_pred             hhcCCCC----CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCCCCCCC
Q 035642          215 VSRTPIC----RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPN  267 (367)
Q Consensus       215 ~~~~p~~----~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~~  267 (367)
                      ....+.+    +.....+.-.++.-++...   ..|.++.+.-|-.++.++....|+
T Consensus       242 ~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~---~~~~v~y~G~Gs~~Y~~ig~~~P~  295 (299)
T PF08643_consen  242 SSAIPAGSGRGKGSSLRELHNAVFDALYGS---SKGSVVYVGRGSRIYDWIGRWLPE  295 (299)
T ss_pred             hhccCCCCCCCCCCHHHHHHHHHHHhhcCC---CCCCEEEEcCceeHHHHHHHHcCc
Confidence            1112222    3335566666666666332   278999999998887666555443

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN00016 RNA-binding protein; Provisional

Probab=99.36  E-value=2.9e-11  Score=118.21  Aligned_cols=197  Identities=16%  Similarity=0.172  Sum_probs=125.2

Q ss_pred             CeEEEE----cCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642           11 QNYFIT----GGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-------QEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus        11 ~~vLVT----Gas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~-------~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      ++||||    ||+|+||.+++++|+++|++|++++|+........       .++..  ..+.++.+|+.|   +.+++.
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhhhc
Confidence            379999    99999999999999999999999999875432211       12221  236778888876   333331


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC---
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL---  156 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~---  156 (367)
                           . ..+|+|||+++.         .           ..++..+++++    ++.+..++|++||...+.....   
T Consensus       128 -----~-~~~d~Vi~~~~~---------~-----------~~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~~p~  177 (378)
T PLN00016        128 -----G-AGFDVVYDNNGK---------D-----------LDEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDEPPH  177 (378)
T ss_pred             -----c-CCccEEEeCCCC---------C-----------HHHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCCCCC
Confidence                 1 468999999762         1           11233344443    4456779999999765432111   


Q ss_pred             -----CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCC
Q 035642          157 -----TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICR  222 (367)
Q Consensus       157 -----~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~  222 (367)
                           ...+. +|...+.+.+       ..++++..+.|+++.++.....    ........+....+         ..-
T Consensus       178 ~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~----~~~~~~~~~~~~~~i~~~g~g~~~~~  245 (378)
T PLN00016        178 VEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKD----CEEWFFDRLVRGRPVPIPGSGIQLTQ  245 (378)
T ss_pred             CCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCc----hHHHHHHHHHcCCceeecCCCCeeec
Confidence                 01122 7888877653       2378999999999998853211    00112222222211         112


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +.+++|+|+++..++.  .....|+++++.++..
T Consensus       246 ~i~v~Dva~ai~~~l~--~~~~~~~~yni~~~~~  277 (378)
T PLN00016        246 LGHVKDLASMFALVVG--NPKAAGQIFNIVSDRA  277 (378)
T ss_pred             eecHHHHHHHHHHHhc--CccccCCEEEecCCCc
Confidence            5679999999999884  3334678999987753

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.36  E-value=4.5e-11  Score=110.21  Aligned_cols=178  Identities=12%  Similarity=0.118  Sum_probs=130.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      +||||++|-+|.++++.|. .++.|+.++|..                     +|++|++.+.+++.+.      ++|+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCCEE
Confidence            8999999999999999999 778999988764                     6999999999999873      79999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccHH
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLYG  161 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y~  161 (367)
                      ||+|+......    .+.+-+..+.+|..|+.++.+++...     +..+|++|+-.-+.+.           .+...||
T Consensus        55 In~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          55 INAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             EECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            99999865432    23335678899999999999998543     5789999986544332           2345899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-------CCCCCCCHHHHHHHHH
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-------PICRPGEPDEVSSLVA  234 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~dvA~ai~  234 (367)
                      .||.+-|..++...       -+...+..+|+.+.....+     ...+++......       ..+.....+|+|+++.
T Consensus       126 ~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nF-----v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~  193 (281)
T COG1091         126 RSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNF-----VKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAIL  193 (281)
T ss_pred             HHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCH-----HHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHH
Confidence            99999999988764       2334566666665533111     011222222222       2345668999999999


Q ss_pred             HHhCC
Q 035642          235 FLCFP  239 (367)
Q Consensus       235 ~L~s~  239 (367)
                      .++..
T Consensus       194 ~ll~~  198 (281)
T COG1091         194 ELLEK  198 (281)
T ss_pred             HHHhc
Confidence            98843

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.35  E-value=2.4e-11  Score=114.89  Aligned_cols=164  Identities=21%  Similarity=0.235  Sum_probs=119.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChh---HHHHHHHHHH-------hcCCcEEEEEccCCCH------HHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQT---ELNERLQEWK-------LKGLKVTGSVCDLSSR------EQR   74 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~---~~~~~~~~l~-------~~~~~~~~~~~Dlsd~------~sv   74 (367)
                      ++++|||||++|+.++.+|+.+- ++|++..|-.+   ..+.+.+.+.       ....++..+..|++.+      ...
T Consensus         2 ~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~   81 (382)
T COG3320           2 NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTW   81 (382)
T ss_pred             eEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHH
Confidence            68999999999999999999664 59999888654   2333333333       2356899999999843      344


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      +++.        ..+|.+||||+....-       ....+...+|+.|+..+++.+.-    .+.+.+.++||++.....
T Consensus        82 ~~La--------~~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~  142 (382)
T COG3320          82 QELA--------ENVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHh--------hhcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeecccc
Confidence            4444        4699999999976421       12346778999999999998742    334559999998654311


Q ss_pred             --------------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc
Q 035642          155 --------------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS  198 (367)
Q Consensus       155 --------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~  198 (367)
                                          .....|+-||.+.|.+++....    +|+++..+.||++-++-.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence                                1235799999999999988764    389999999999966543

>PRK12320 hypothetical protein; Provisional

Probab=99.31  E-value=1.2e-10  Score=120.34  Aligned_cols=189  Identities=17%  Similarity=0.218  Sum_probs=123.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+....         ....+.++.+|++++. +.+++        .++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence            599999999999999999999999999999875321         1235778999999973 44333        45899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      +||+|+.....            ...+|+.|+.++++++..    .+ .+||++||..+   .+  ..|.    ..|.+.
T Consensus        64 VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G---~~--~~~~----~aE~ll  117 (699)
T PRK12320         64 VIHLAPVDTSA------------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG---RP--ELYR----QAETLV  117 (699)
T ss_pred             EEEcCccCccc------------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC---CC--cccc----HHHHHH
Confidence            99999863211            114799999999988743    33 47999998642   11  1233    223322


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                          ..   .++.+..+.|+.+.++...... ...............|+. +..++|++++++.+++.  . .+| .+++
T Consensus       118 ----~~---~~~p~~ILR~~nVYGp~~~~~~-~r~I~~~l~~~~~~~pI~-vIyVdDvv~alv~al~~--~-~~G-iyNI  184 (699)
T PRK12320        118 ----ST---GWAPSLVIRIAPPVGRQLDWMV-CRTVATLLRSKVSARPIR-VLHLDDLVRFLVLALNT--D-RNG-VVDL  184 (699)
T ss_pred             ----Hh---cCCCEEEEeCceecCCCCcccH-hHHHHHHHHHHHcCCceE-EEEHHHHHHHHHHHHhC--C-CCC-EEEE
Confidence                12   3578899999999988432110 011111222222222322 35899999999888843  2 245 8999


Q ss_pred             CCCccc
Q 035642          252 DGGMTV  257 (367)
Q Consensus       252 dgG~~~  257 (367)
                      .||...
T Consensus       185 G~~~~~  190 (699)
T PRK12320        185 ATPDTT  190 (699)
T ss_pred             eCCCee
Confidence            888654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.26  E-value=1e-10  Score=105.94  Aligned_cols=207  Identities=15%  Similarity=0.101  Sum_probs=142.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ...+ +++||||+|+||+|++++|..+|+.|++.+.-...-......+-. ..++..+.-|+..+     ++        
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~--------   89 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LL--------   89 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HH--------
Confidence            3445 999999999999999999999999999988655443333322211 23455555566654     33        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc--------------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT--------------  152 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~--------------  152 (367)
                      ..+|.++|.|++..+..+.-..    -+++..|+.++.+++..+..     -+.|++..|+..-+-              
T Consensus        90 ~evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakr-----v~aR~l~aSTseVYgdp~~hpq~e~ywg~  160 (350)
T KOG1429|consen   90 KEVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVYGDPLVHPQVETYWGN  160 (350)
T ss_pred             HHhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHH-----hCceEEEeecccccCCcccCCCccccccc
Confidence            3478999999987665433222    35678999999999888743     247888887754331              


Q ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC---------
Q 035642          153 --AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC---------  221 (367)
Q Consensus       153 --~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~---------  221 (367)
                        +....+.|.-.|.+.+.|+..+.++   .||.|....+-.+.+|.+........++ +..+..+..|+.         
T Consensus       161 vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsn-f~~q~lr~epltv~g~G~qtR  236 (350)
T KOG1429|consen  161 VNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSN-FIAQALRGEPLTVYGDGKQTR  236 (350)
T ss_pred             cCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHH-HHHHHhcCCCeEEEcCCcceE
Confidence              1223568999999999999998876   4888888888888888765444333222 344444555532         


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCC
Q 035642          222 RPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      .+.-+.|..+.++.|.  ++++
T Consensus       237 SF~yvsD~Vegll~Lm--~s~~  256 (350)
T KOG1429|consen  237 SFQYVSDLVEGLLRLM--ESDY  256 (350)
T ss_pred             EEEeHHHHHHHHHHHh--cCCC
Confidence            2445899999999998  4444

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.25  E-value=4.1e-10  Score=115.08  Aligned_cols=221  Identities=14%  Similarity=0.084  Sum_probs=137.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhH--HH-HHHHHH---------Hhc---------CCcEEEEEc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTE--LN-ERLQEW---------KLK---------GLKVTGSVC   66 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~--~~-~~~~~l---------~~~---------~~~~~~~~~   66 (367)
                      ++|+||||||+||.+++++|++.+.   +|++..|....  .. .+.+++         ++.         ..++.++.+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            3999999999999999999998763   68888886432  22 221121         111         246888999


Q ss_pred             cCCCHH------HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC
Q 035642           67 DLSSRE------QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG  140 (367)
Q Consensus        67 Dlsd~~------sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g  140 (367)
                      |+++++      ..+.+.        ..+|+|||+|+.....       +..+..+++|+.|+.++++.+...   ....
T Consensus       200 Dl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~~---~~lk  261 (605)
T PLN02503        200 NVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKKC---KKLK  261 (605)
T ss_pred             eCCCcccCCCHHHHHHHH--------hcCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHHc---CCCC
Confidence            999873      333332        3589999999976421       345678899999999999988543   2245


Q ss_pred             EEEEecCccccc---------CCC--------------------------------------------------------
Q 035642          141 IIVFISSVAGVT---------AAP--------------------------------------------------------  155 (367)
Q Consensus       141 ~IV~iSS~~~~~---------~~~--------------------------------------------------------  155 (367)
                      ++|++||....-         .++                                                        
T Consensus       262 ~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~  341 (605)
T PLN02503        262 LFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERA  341 (605)
T ss_pred             eEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchh
Confidence            799988854321         011                                                        


Q ss_pred             ----CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh----hHHHHHHhhc----CC----
Q 035642          156 ----LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK----NKIVEGLVSR----TP----  219 (367)
Q Consensus       156 ----~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~----~p----  219 (367)
                          -...|..+|+..|.++...+     .++.+..+.|+.|.+...+..+.....    ..........    .+    
T Consensus       342 ~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~  416 (605)
T PLN02503        342 KLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPN  416 (605)
T ss_pred             hhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCC
Confidence                01358888888888876432     279999999999866444333221111    0001011111    00    


Q ss_pred             -CCCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 035642          220 -ICRPGEPDEVSSLVAFLCFPA--ASYITGQVICVDGG  254 (367)
Q Consensus       220 -~~~~~~~~dvA~ai~~L~s~~--~~~itG~~i~vdgG  254 (367)
                       ..-.+.++-++++++.++...  .....++++++..+
T Consensus       417 ~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        417 GVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             eeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence             112356888999988774211  11235788888765

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.23  E-value=1.9e-10  Score=104.31  Aligned_cols=221  Identities=14%  Similarity=0.058  Sum_probs=152.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.++||||.|+||.+.+..+...  .++.+..+.-.  .. ...+++.. ...+..++..|+.+...+..++..      
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~------   78 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVR-NSPNYKFVEGDIADADLVLYLFET------   78 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhc-cCCCceEeeccccchHHHHhhhcc------
Confidence            68999999999999999999865  45554443211  11 12222222 246789999999999988888764      


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC------------C
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA------------A  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~------------~  154 (367)
                      .++|.|+|.|+.........    +--.....|+.++..+++++....   +..++|++|+..-+-.            .
T Consensus        79 ~~id~vihfaa~t~vd~s~~----~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVDRSFG----DSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             CchhhhhhhHhhhhhhhhcC----chHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccC
Confidence            68999999999764321111    112345789999999999986542   4578999998643321            1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC--C-------CCCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT--P-------ICRPGE  225 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--p-------~~~~~~  225 (367)
                      .+...|++||+|.+++.+++...+   |+.+..+.-+.|.+|.+.....-+   .++.......  +       .+.+..
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klip---kFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIP---KFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhH---HHHHHHHhCCCcceecCcccceeeEe
Confidence            234579999999999999999875   899999999999999765432222   2333222222  2       233557


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          226 PDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++|+++++...+-.   .-.|+.+++..-.
T Consensus       226 veD~~ea~~~v~~K---g~~geIYNIgtd~  252 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEK---GELGEIYNIGTDD  252 (331)
T ss_pred             HHHHHHHHHHHHhc---CCccceeeccCcc
Confidence            99999999887733   2268898886543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=3.2e-10  Score=113.36  Aligned_cols=156  Identities=18%  Similarity=0.256  Sum_probs=115.5

Q ss_pred             EEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Q 035642           15 ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVN   94 (367)
Q Consensus        15 VTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~   94 (367)
                      |+||+||+|.++++.|...|+.|+.+.+...+.                   +..              .. .+++.+++
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------------------~~~--------------~~-~~~~~~~~   88 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------------------AAG--------------WG-DRFGALVF   88 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc-------------------ccC--------------cC-CcccEEEE
Confidence            778889999999999999999999876654311                   000              00 24554444


Q ss_pred             cCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHH
Q 035642           95 NAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL  174 (367)
Q Consensus        95 ~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~l  174 (367)
                      .+....       +.++        +.+.+..++.+++.|..  .|+||+++|..+..   +...|+++|+++.++++++
T Consensus        89 d~~~~~-------~~~~--------l~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsl  148 (450)
T PRK08261         89 DATGIT-------DPAD--------LKALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSL  148 (450)
T ss_pred             ECCCCC-------CHHH--------HHHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHH
Confidence            332110       2222        22445667777777743  58999999987653   3456999999999999999


Q ss_pred             HHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          175 ECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       175 a~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                      ++|+ ++++++|.|.|+.                               .++++++.++.|++++.+.+++|+.+.++++
T Consensus       149 a~E~-~~gi~v~~i~~~~-------------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~  196 (450)
T PRK08261        149 GKEL-RRGATAQLVYVAP-------------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAA  196 (450)
T ss_pred             HHHh-hcCCEEEEEecCC-------------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCC
Confidence            9999 7799999998874                               2568899999999999999999999999987


Q ss_pred             cc
Q 035642          255 MT  256 (367)
Q Consensus       255 ~~  256 (367)
                      ..
T Consensus       197 ~~  198 (450)
T PRK08261        197 DA  198 (450)
T ss_pred             cc
Confidence            64

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.6e-09  Score=92.27  Aligned_cols=84  Identities=17%  Similarity=0.161  Sum_probs=71.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||| |+|.++++.|+++|++|++++|+.++.+.+...+.. ..++.++.+|++|+++++++++.+.+.+ +++|+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCeE
Confidence            58999998 666779999999999999999998877766655543 4578889999999999999999998888 88999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|+.+-.
T Consensus        79 lv~~vh~   85 (177)
T PRK08309         79 AVAWIHS   85 (177)
T ss_pred             EEEeccc
Confidence            9987764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.16  E-value=2.6e-09  Score=111.98  Aligned_cols=139  Identities=14%  Similarity=0.091  Sum_probs=97.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|.||+++++.|.++|+.|...                        ..|++|.+++.++++.      -++|+
T Consensus       382 kiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~------~~pd~  431 (668)
T PLN02260        382 KFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRN------VKPTH  431 (668)
T ss_pred             eEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHh------hCCCE
Confidence            79999999999999999999999987311                        1367888888777654      25899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------C-------
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------A-------  153 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------~-------  153 (367)
                      |||+|+....... +...++-+..+++|+.|+.++++++...    +. +++++||...+.           +       
T Consensus       432 Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        432 VFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN----GL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             EEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----CC-eEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            9999997643211 1233455678899999999999998643    33 456665533211           1       


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA  189 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~  189 (367)
                      .+....|+.||.+.|.+++.+..   -..+|+..+.
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence            11235799999999999988642   2345665554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.15  E-value=6.2e-10  Score=100.95  Aligned_cols=205  Identities=17%  Similarity=0.176  Sum_probs=118.5

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      ++||||||.||++++.+|.+.|+.|.++.|+..+.+....      ..       +...+.+....+       .++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~-------v~~~~~~~~~~~-------~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PN-------VTLWEGLADALT-------LGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------cc-------ccccchhhhccc-------CCCCEE
Confidence            5899999999999999999999999999999876543211      00       111122222221       369999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH----HHHH
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN----GAMN  168 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK----aal~  168 (367)
                      ||-||..-....  .+.+.-+..++.-+..+-.+...+...  + ...++..-+|..++++..+...|.-..    -.+.
T Consensus        61 INLAG~~I~~rr--Wt~~~K~~i~~SRi~~T~~L~e~I~~~--~-~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla  135 (297)
T COG1090          61 INLAGEPIAERR--WTEKQKEEIRQSRINTTEKLVELIAAS--E-TKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLA  135 (297)
T ss_pred             EECCCCcccccc--CCHHHHHHHHHHHhHHHHHHHHHHHhc--c-CCCcEEEecceEEEecCCCceeeecCCCCCCChHH
Confidence            999997543321  245555555555444444444444321  2 234555556777777765544443322    2344


Q ss_pred             HHHHHHHHHh---CCCCeEEEEEecCcccCCccccccCChhhhHHHHHH----hhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          169 QLTKHLECEQ---AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGL----VSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       169 ~l~~~la~e~---~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      .+++.+-.+.   ...|+||..+.-|.|-++-...+.....  ...-.+    ......--|...+|..+++.|++  ++
T Consensus       136 ~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~--~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll--~~  211 (297)
T COG1090         136 QLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLP--LFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLL--EN  211 (297)
T ss_pred             HHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcc--hhhhccCCccCCCCceeeeeeHHHHHHHHHHHH--hC
Confidence            5555444332   2348999999999987653322211100  000000    11111123568999999999999  55


Q ss_pred             CCccc
Q 035642          242 SYITG  246 (367)
Q Consensus       242 ~~itG  246 (367)
                      ..+.|
T Consensus       212 ~~lsG  216 (297)
T COG1090         212 EQLSG  216 (297)
T ss_pred             cCCCC
Confidence            55565

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.12  E-value=2.4e-10  Score=103.71  Aligned_cols=101  Identities=17%  Similarity=0.168  Sum_probs=78.7

Q ss_pred             eEEEEcC-CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGG-TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGa-s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +-.||.. |||||+++|++|+++|++|+++++...        +....    ...+|+++.+++.++++++.+.+ +++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~iD   82 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP----HPNLSIREIETTKDLLITLKELV-QEHD   82 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc----CCcceeecHHHHHHHHHHHHHHc-CCCC
Confidence            4455554 689999999999999999999876311        11001    23579999999999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK  128 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~  128 (367)
                      ++|||||+....++.+.+.++|++++.   .+.+++.+
T Consensus        83 iLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        83 ILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             EEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            999999998777888889999998744   45666655

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.05  E-value=6.1e-10  Score=101.04  Aligned_cols=215  Identities=16%  Similarity=0.056  Sum_probs=143.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER----LQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~----~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .+++||||-||--|..+|+.|+++|+.|.++.|........    .+.-...+.++..+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            45899999999999999999999999999998874332211    1111122456889999999999999999875    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-----------cCC
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-----------TAA  154 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-----------~~~  154 (367)
                        ++|-+.|.|+.+.-+    .+.+.-+.+.+++..|+.+++.++.-+-  .+..++..-||..-+           .++
T Consensus        78 --~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPF  149 (345)
T COG1089          78 --QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPF  149 (345)
T ss_pred             --Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCC
Confidence              689999999876543    2444445677899999999999875432  224566666664322           234


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccCCccccccCChhhhHHHHHHhh------cCCCCCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAK---DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS------RTPICRPGE  225 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~---~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~~  225 (367)
                      .+.+.|+++|....-++..++..++-   .||-.|.=+|.-=.|-..+++...  ...+......      ....+.|+.
T Consensus       150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~a--va~Ik~G~q~~l~lGNldAkRDWG~  227 (345)
T COG1089         150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRA--VARIKLGLQDKLYLGNLDAKRDWGH  227 (345)
T ss_pred             CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHH--HHHHHccccceEEeccccccccccc
Confidence            56789999999999999988877642   355555555542222222221110  0001111111      123445888


Q ss_pred             HHHHHHHHHHHhC
Q 035642          226 PDEVSSLVAFLCF  238 (367)
Q Consensus       226 ~~dvA~ai~~L~s  238 (367)
                      ..|..++...++.
T Consensus       228 A~DYVe~mwlmLQ  240 (345)
T COG1089         228 AKDYVEAMWLMLQ  240 (345)
T ss_pred             hHHHHHHHHHHHc
Confidence            9999999988884

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.00  E-value=2.1e-09  Score=97.80  Aligned_cols=203  Identities=17%  Similarity=0.175  Sum_probs=121.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      |+||||+|.+|+++++.|++.|++|.++.|+..+  ...+.++..|.  .++.+|+.|++++.+++        .++|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al--------~g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAAL--------KGVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHH--------TTCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHH--------cCCceE
Confidence            6899999999999999999999999999999743  23344444454  45689999999999888        569999


Q ss_pred             EEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC--CC--ccHHHHHHHHH
Q 035642           93 VNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP--LT--PLYGPYNGAMN  168 (367)
Q Consensus        93 I~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~--~~--~~Y~asKaal~  168 (367)
                      +++-+.....     .           .....++++++..    .+..++|+ ||........  ..  ..+-..|..++
T Consensus        69 ~~~~~~~~~~-----~-----------~~~~~~li~Aa~~----agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   69 FSVTPPSHPS-----E-----------LEQQKNLIDAAKA----AGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             EEESSCSCCC-----H-----------HHHHHHHHHHHHH----HT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             EeecCcchhh-----h-----------hhhhhhHHHhhhc----cccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            9988865311     1           2223445555543    34788885 5544433211  11  22334666666


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC---CC-CCHHHHHHHHHHHhCCCCCCc
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC---RP-GEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~---~~-~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      .+.+..       +++.+.|.||+.....................+.-..+..   .+ .+.+|+|+++..++.+...+-
T Consensus       128 ~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~  200 (233)
T PF05368_consen  128 EYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN  200 (233)
T ss_dssp             HHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence            554433       7999999999765433221111000000000000001111   23 378999999999887655544


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      .|..+.+.|..
T Consensus       201 ~~~~~~~~~~~  211 (233)
T PF05368_consen  201 NGKTIFLAGET  211 (233)
T ss_dssp             EEEEEEEGGGE
T ss_pred             CCEEEEeCCCC
Confidence            78888876533

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.84  E-value=3.4e-07  Score=84.70  Aligned_cols=196  Identities=16%  Similarity=0.099  Sum_probs=127.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .+|||||||++|++++++|+++|+.|+...|+.+++....       ..+.+...|+.++.++...+        .++|.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~~   66 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVDG   66 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------ccccE
Confidence            5899999999999999999999999999999998876654       46788889999999999888        46888


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      +++..+... +..         ........+..+..+...     .+..+++.+|+..+..  .....|..+|...+...
T Consensus        67 ~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l  129 (275)
T COG0702          67 VLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAAL  129 (275)
T ss_pred             EEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHH
Confidence            888887654 211         011223334444444432     2345677777766543  24567999999988876


Q ss_pred             HHHHHHhCCCCeEEEEEe-cCcccCCccccccCChhhhHHHHHHhh--cCCCC--CCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          172 KHLECEQAKDNIRANSIA-PGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPIC--RPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~-PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~~--~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.       |+.-..+. ++++.......   ...   .......  ..+.+  .....+|++..+...+..+.  ..|
T Consensus       130 ~~s-------g~~~t~lr~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~  194 (275)
T COG0702         130 RSS-------GIPYTTLRRAAFYLGAGAAF---IEA---AEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAG  194 (275)
T ss_pred             Hhc-------CCCeEEEecCeeeeccchhH---HHH---HHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccC
Confidence            654       56655566 44443322110   000   1111100  01111  34678999999888874333  577


Q ss_pred             cEEEeCCC
Q 035642          247 QVICVDGG  254 (367)
Q Consensus       247 ~~i~vdgG  254 (367)
                      +.+.+.|-
T Consensus       195 ~~~~l~g~  202 (275)
T COG0702         195 RTYELAGP  202 (275)
T ss_pred             cEEEccCC
Confidence            88887775

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.83  E-value=1.5e-08  Score=105.92  Aligned_cols=179  Identities=22%  Similarity=0.322  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHH---HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELN---ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~---~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +...++++|+||-||.|.++|..|..+|+ .+++++|+--+--   .....++..|.++.+-..|++..+..+.++++..
T Consensus      1765 ~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1765 CHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh
Confidence            34556999999999999999999999999 5889999853321   2344555667777777779999999999988776


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +.  +.+..++|.|.+....-+++.+.++|++.-++.+.|+.++-+.-......  -.-+|..||.+.-.+..++..|+-
T Consensus      1845 kl--~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~ 1920 (2376)
T KOG1202|consen 1845 KL--GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGL 1920 (2376)
T ss_pred             hc--ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccch
Confidence            54  78999999999998889999999999999999999999987766544322  356888999999899999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVI  193 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v  193 (367)
                      ++++++.++..-..+    |+.-.+|..|.+
T Consensus      1921 aNS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1921 ANSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             hhHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            999999999876654    555566777665

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.73  E-value=1.5e-07  Score=85.65  Aligned_cols=212  Identities=13%  Similarity=0.064  Sum_probs=140.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      -+.+| ++-|.||||++|+.++.+|++.|-.|++--|-.+.--.-.+-+.. =+++.+...|+.|+++++++++.     
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk~-----  130 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVKH-----  130 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHHh-----
Confidence            35678 888999999999999999999999999988865432211122211 14788999999999999999963     


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                         -.+|||..|--.+..  +.+      .-++|+.++-.+.+.+.    +.+.-++|.+|+..+.  ....+-|--||+
T Consensus       131 ---sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlArick----e~GVerfIhvS~Lgan--v~s~Sr~LrsK~  193 (391)
T KOG2865|consen  131 ---SNVVINLIGRDYETK--NFS------FEDVNVHIAERLARICK----EAGVERFIHVSCLGAN--VKSPSRMLRSKA  193 (391)
T ss_pred             ---CcEEEEeeccccccC--Ccc------cccccchHHHHHHHHHH----hhChhheeehhhcccc--ccChHHHHHhhh
Confidence               479999999533211  111      23578888888877763    4567789999998754  334455777888


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCC--------CCHHHHHHHHHHHh
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRP--------GEPDEVSSLVAFLC  237 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~dvA~ai~~L~  237 (367)
                      +.|..++..   + +   ..+.|.|.-+.+..-+-+.....   .... ....|+...        +-+-|||++++-.+
T Consensus       194 ~gE~aVrda---f-P---eAtIirPa~iyG~eDrfln~ya~---~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv  262 (391)
T KOG2865|consen  194 AGEEAVRDA---F-P---EATIIRPADIYGTEDRFLNYYAS---FWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV  262 (391)
T ss_pred             hhHHHHHhh---C-C---cceeechhhhcccchhHHHHHHH---HHHh-cCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence            877766542   2 2   23668888776543221110000   1111 122333222        34679999999999


Q ss_pred             CCCCCCccccEEEeCCC
Q 035642          238 FPAASYITGQVICVDGG  254 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG  254 (367)
                      .|.  ...|.++...|.
T Consensus       263 kDp--~s~Gktye~vGP  277 (391)
T KOG2865|consen  263 KDP--DSMGKTYEFVGP  277 (391)
T ss_pred             cCc--cccCceeeecCC
Confidence            655  458999887765

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.62  E-value=8.5e-07  Score=78.28  Aligned_cols=203  Identities=16%  Similarity=0.143  Sum_probs=129.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++++|||++|=+|++|.+.+.+.|.   +-+..+..                     .+|+++.++.++++++      .
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~------e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFES------E   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhc------c
Confidence            3799999999999999999998886   33333222                     2699999999999986      4


Q ss_pred             CccEEEEcCCCCCCCCcc--CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-------------
Q 035642           88 KLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-------------  152 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~--~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-------------  152 (367)
                      ++..|||.|+..+. -+.  ....+-|    ..|+.-.-++++.+..+    +..++|+..|.+-+-             
T Consensus        55 kPthVIhlAAmVGG-lf~N~~ynldF~----r~Nl~indNVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh  125 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGG-LFHNNTYNLDFI----RKNLQINDNVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVH  125 (315)
T ss_pred             CCceeeehHhhhcc-hhhcCCCchHHH----hhcceechhHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhc
Confidence            67888998875432 111  1233434    44444445666666543    344566666654321             


Q ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHH--------------
Q 035642          153 ---AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGL--------------  214 (367)
Q Consensus       153 ---~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~--------------  214 (367)
                         +.+....|+.+|..+.-..+.++.++   |-...++-|-.+++|--.--... .-.+..+..+              
T Consensus       126 ~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw  202 (315)
T KOG1431|consen  126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW  202 (315)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence               12344579999987777778888886   56777888888877743211111 1112122211              


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          215 VSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       215 ~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ....|++.+...+|.|++.+|++.   .|-.=+-|.+..|.
T Consensus       203 GsG~PlRqFiys~DLA~l~i~vlr---~Y~~vEpiils~ge  240 (315)
T KOG1431|consen  203 GSGSPLRQFIYSDDLADLFIWVLR---EYEGVEPIILSVGE  240 (315)
T ss_pred             cCCChHHHHhhHhHHHHHHHHHHH---hhcCccceEeccCc
Confidence            223677778889999999999994   33344566666554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.57  E-value=3.5e-07  Score=86.08  Aligned_cols=83  Identities=20%  Similarity=0.201  Sum_probs=65.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++ +++|||| ||+|++++..|++.|++ |++++|+.   ++++++.+++...+..+.+..+|+++.+++.+.+     
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~-----  197 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI-----  197 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh-----
Confidence            445 8999999 69999999999999995 99999997   6777877777655455566677988877776554     


Q ss_pred             HcCCCccEEEEcCCCCC
Q 035642           84 IFQGKLNLLVNNAAVAV  100 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~  100 (367)
                         ...|++|||-.+..
T Consensus       198 ---~~~DilINaTp~Gm  211 (289)
T PRK12548        198 ---ASSDILVNATLVGM  211 (289)
T ss_pred             ---ccCCEEEEeCCCCC
Confidence               35799999987653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.51  E-value=4.1e-07  Score=89.10  Aligned_cols=81  Identities=20%  Similarity=0.152  Sum_probs=61.6

Q ss_pred             CCCC-eEEEEcC----------------CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC
Q 035642            8 SNEQ-NYFITGG----------------TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS   70 (367)
Q Consensus         8 ~~~~-~vLVTGa----------------s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd   70 (367)
                      ++++ ++|||||                ||++|.++|++|+++|++|++++++.+ .+     .   ..  ....+|+++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~---~~--~~~~~dv~~  253 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T---PA--GVKRIDVES  253 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C---CC--CcEEEccCC
Confidence            3566 9999999                555999999999999999999988752 11     0   11  134579999


Q ss_pred             HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q 035642           71 REQREKLMETVSSIFQGKLNLLVNNAAVAVPKE  103 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~  103 (367)
                      .+++.+.++   +.+ +++|++|||||+....+
T Consensus       254 ~~~~~~~v~---~~~-~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        254 AQEMLDAVL---AAL-PQADIFIMAAAVADYRP  282 (399)
T ss_pred             HHHHHHHHH---Hhc-CCCCEEEEccccccccc
Confidence            888777765   345 78999999999875543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.50  E-value=2.7e-06  Score=82.54  Aligned_cols=167  Identities=18%  Similarity=0.223  Sum_probs=104.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      ++|+|+||+|++|+-+++.|.++|+.|....|+.++.+..... .........+..|...+ +....+++.+.    ...
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~-~~~d~~~~~v~~~~~~~~d~~~~~~~~~~----~~~  154 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV-FFVDLGLQNVEADVVTAIDILKKLVEAVP----KGV  154 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc-cccccccceeeeccccccchhhhhhhhcc----ccc
Confidence            3899999999999999999999999999999999888777651 11122333444444433 33344443321    135


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      .+++-++|......       +...-..+.+.|..++.+++    +..+..|+|++||+.+.........+..   ....
T Consensus       155 ~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~---~~~~  220 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL---NGLV  220 (411)
T ss_pred             eeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh---hhhh
Confidence            67777776543221       11222346677888888888    3456789999999887665444333331   1111


Q ss_pred             HHH--HHHHHhCCCCeEEEEEecCcccCC
Q 035642          170 LTK--HLECEQAKDNIRANSIAPGVIRTS  196 (367)
Q Consensus       170 l~~--~la~e~~~~gIrvn~I~PG~v~t~  196 (367)
                      +.+  .....+...|+.-..|.||..+.+
T Consensus       221 ~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  221 LKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            221  223334456888899999977654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.48  E-value=1.4e-05  Score=68.57  Aligned_cols=198  Identities=13%  Similarity=0.055  Sum_probs=123.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++.|.||||-.|..++++..++|+.|..+.|+..+....        ..+...+.|+.|++++.+.+        .+.|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCce
Confidence            578999999999999999999999999999999876432        24667888999999886666        46899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--------CCCc--cHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------PLTP--LYG  161 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--------~~~~--~Y~  161 (367)
                      ||..-|...+.     ..+..           .-..+++...++..+..|++.++...+..-.        |.++  .|.
T Consensus        66 VIsA~~~~~~~-----~~~~~-----------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~  129 (211)
T COG2910          66 VISAFGAGASD-----NDELH-----------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP  129 (211)
T ss_pred             EEEeccCCCCC-----hhHHH-----------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH
Confidence            99988865332     11111           1114455555566678899999887665422        2222  244


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      .+++..+ +...|..+   .++..+-++|...+.|.-+. ..-.-   .-+.+.....-.-..+-+|-|-+++--+  +.
T Consensus       130 ~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerT-g~yrl---ggD~ll~n~~G~SrIS~aDYAiA~lDe~--E~  199 (211)
T COG2910         130 EALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERT-GNYRL---GGDQLLVNAKGESRISYADYAIAVLDEL--EK  199 (211)
T ss_pred             HHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCcccc-CceEe---ccceEEEcCCCceeeeHHHHHHHHHHHH--hc
Confidence            4444333 33344444   35888899999887773221 11000   0001111111123457789998888776  44


Q ss_pred             CCccccEEEe
Q 035642          242 SYITGQVICV  251 (367)
Q Consensus       242 ~~itG~~i~v  251 (367)
                      ..-.-|+|.|
T Consensus       200 ~~h~rqRftv  209 (211)
T COG2910         200 PQHIRQRFTV  209 (211)
T ss_pred             ccccceeeee
Confidence            4445555544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.46  E-value=7.1e-07  Score=81.14  Aligned_cols=100  Identities=16%  Similarity=0.107  Sum_probs=66.1

Q ss_pred             CeEEEEcCCC-hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTR-GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~-GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+-.||+.|+ +||+++|++|+++|++|++++|+....     .  .....+.++.++  +   .+++.+.+.+.+ +.+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~--~~~~~v~~i~v~--s---~~~m~~~l~~~~-~~~   82 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----P--EPHPNLSIIEIE--N---VDDLLETLEPLV-KDH   82 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----C--CCCCCeEEEEEe--c---HHHHHHHHHHHh-cCC
Confidence            3556776555 599999999999999999998764210     0  011244555432  2   233333333334 679


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV  123 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~  123 (367)
                      |++|||||+....+....+.++|.+++++|....
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999998666666667888888888875543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.45  E-value=3e-06  Score=83.47  Aligned_cols=176  Identities=18%  Similarity=0.205  Sum_probs=113.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--C-EEEEEeCChhH--H-H--------HHHHHHHhc----CCcEEEEEccCCCH
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFG--A-IIHTCSRNQTE--L-N--------ERLQEWKLK----GLKVTGSVCDLSSR   71 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G--~-~Vi~~~R~~~~--~-~--------~~~~~l~~~----~~~~~~~~~Dlsd~   71 (367)
                      +++++||||||++|+-+++.|++.-  . ++++.-|....  . +        .+.+.+.+.    -.++..+.+|++++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            3499999999999999999999653  2 67787775421  1 1        122222222    14677888898876


Q ss_pred             HHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc
Q 035642           72 EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV  151 (367)
Q Consensus        72 ~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~  151 (367)
                      +---+--+.- ... ..+|++||+|+....       .|..+..+.+|..|+.++++.+.....-   ...+.+|+.-..
T Consensus        92 ~LGis~~D~~-~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTAy~n  159 (467)
T KOG1221|consen   92 DLGISESDLR-TLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTAYSN  159 (467)
T ss_pred             ccCCChHHHH-HHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehhhee
Confidence            4211111100 011 579999999997543       3556788899999999999998776432   457888775443


Q ss_pred             c----------CCC------------------------------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 035642          152 T----------AAP------------------------------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG  191 (367)
Q Consensus       152 ~----------~~~------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG  191 (367)
                      .          +.+                              ....|.-+|+-.|++...-+     .++.+..+.|+
T Consensus       160 ~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivIiRPs  234 (467)
T KOG1221|consen  160 CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVIIRPS  234 (467)
T ss_pred             cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEEEcCC
Confidence            1          000                              11257777777777665543     36888889998


Q ss_pred             cccCCcccccc
Q 035642          192 VIRTSLSDAIR  202 (367)
Q Consensus       192 ~v~t~~~~~~~  202 (367)
                      .|.+...+...
T Consensus       235 iI~st~~EP~p  245 (467)
T KOG1221|consen  235 IITSTYKEPFP  245 (467)
T ss_pred             ceeccccCCCC
Confidence            88766554443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.44  E-value=2e-06  Score=76.17  Aligned_cols=83  Identities=14%  Similarity=0.146  Sum_probs=65.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|+||+|++|+++++.|++.|++|++++|+.++++++.+.+.... ......+|..+.+++.+.+        
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~--------   95 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAI--------   95 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHH--------
Confidence            4556 99999999999999999999999999999999999888887775321 2334456888888877766        


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      .+.|++|++.+..
T Consensus        96 ~~~diVi~at~~g  108 (194)
T cd01078          96 KGADVVFAAGAAG  108 (194)
T ss_pred             hcCCEEEECCCCC
Confidence            3478888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.44  E-value=1.2e-05  Score=80.25  Aligned_cols=236  Identities=18%  Similarity=0.119  Sum_probs=139.5

Q ss_pred             eEEEEcCC-ChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHH----hcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGT-RGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWK----LKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas-~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~----~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++|||||+ +.||.+++..|++.|++||++..+-. +-.+..+.+-    ..+..+.++..++++..+++++++.+-..-
T Consensus       398 valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq  477 (866)
T COG4982         398 VALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQ  477 (866)
T ss_pred             eEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcccc
Confidence            89999998 56999999999999999999765532 2223333332    236678888899999999999998874321


Q ss_pred             C-------------CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcc
Q 035642           86 Q-------------GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVA  149 (367)
Q Consensus        86 ~-------------g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~  149 (367)
                      -             -.+|.++-.|++...+.+.+..... +-.+.+-+.....++-.+.+.-..++   .-++|.=.|..
T Consensus       478 ~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPN  556 (866)
T COG4982         478 TETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPN  556 (866)
T ss_pred             ccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCC
Confidence            0             1368888888876665554433221 22223333333333333333221121   23455555532


Q ss_pred             -cccCCCCCccHHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCH
Q 035642          150 -GVTAAPLTPLYGPYNGAMNQLTKHLECEQ--AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP  226 (367)
Q Consensus       150 -~~~~~~~~~~Y~asKaal~~l~~~la~e~--~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  226 (367)
                       +.  +.+-.+|+-||++++.+.--+..|-  +. -+.+..-.-||+.+.....  .+..   ....+.+. - -+.-+.
T Consensus       557 rG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg--~Ndi---iv~aiEk~-G-V~tyS~  626 (866)
T COG4982         557 RGM--FGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMG--HNDI---IVAAIEKA-G-VRTYST  626 (866)
T ss_pred             CCc--cCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccC--Ccch---hHHHHHHh-C-ceecCH
Confidence             22  2355789999999998876555442  22 2455555568886543221  1111   22222211 1 133478


Q ss_pred             HHHHHHHHHHhCCCCCCc---cccEEEeCCCcccc
Q 035642          227 DEVSSLVAFLCFPAASYI---TGQVICVDGGMTVN  258 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~i---tG~~i~vdgG~~~~  258 (367)
                      +|+|..++-|++.+....   +--...+.||....
T Consensus       627 ~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         627 DEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             HHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            999999999997553321   23345667887654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.24  E-value=3.8e-06  Score=82.05  Aligned_cols=108  Identities=19%  Similarity=0.126  Sum_probs=70.9

Q ss_pred             CCC-eEEEEcC---------------CCh-hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH
Q 035642            9 NEQ-NYFITGG---------------TRG-IGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR   71 (367)
Q Consensus         9 ~~~-~vLVTGa---------------s~G-IG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~   71 (367)
                      +++ ++|||||               |+| +|.++|++|..+|++|+++.+.....         ....  ...+|+++.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~~  251 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVSTA  251 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEeccH
Confidence            556 9999999               666 99999999999999999988765321         1111  245699998


Q ss_pred             HHH-HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCC--HHHHHHhHHHhhHHHHHHHHHHH
Q 035642           72 EQR-EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT--AEYMSTLRSTNFESVFHLSKLAH  131 (367)
Q Consensus        72 ~sv-~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~--~e~~~~~~~vNv~g~~~l~~~~~  131 (367)
                      +++ ++++++.   + +++|++|+|||+....+....+  .......+..|+.-+--+++.+.
T Consensus       252 ~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       252 EEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             HHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            888 5555443   3 6799999999997665432211  11111234455555555555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.15  E-value=9.9e-06  Score=78.43  Aligned_cols=76  Identities=20%  Similarity=0.317  Sum_probs=66.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||.|| |+||+.+|..|+++| .+|.+++|+.++++++.+..   +.++.+.++|+.|.+++.++++        ..|
T Consensus         3 ~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~--------~~d   70 (389)
T COG1748           3 KILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK--------DFD   70 (389)
T ss_pred             cEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh--------cCC
Confidence            6899999 999999999999999 79999999999888876654   3488999999999999998885        349


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      +|||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999999864

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.12  E-value=1.4e-05  Score=78.47  Aligned_cols=76  Identities=21%  Similarity=0.298  Sum_probs=61.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           13 YFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      |+|.|| |.+|+.+++.|++.+-  +|++.+|+.++++++.+.+  .+.++.++++|+.|.+++.+++        .+.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence            689999 9999999999999874  8999999999988887765  3668999999999999998888        4569


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      +|||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.07  E-value=5.4e-06  Score=74.17  Aligned_cols=222  Identities=15%  Similarity=0.058  Sum_probs=132.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHHHH-----hcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER-LQEWK-----LKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~-~~~l~-----~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      ++..+++||||-+|-=|..+++-|+.+|+.|.++-|........ .+.+-     ..++.....-.|++|...+.+++..
T Consensus        25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            44556999999999999999999999999999987765443322 22222     1356677777899999999999887


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc--------
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT--------  152 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~--------  152 (367)
                      +      +++-+.|.|+..+-+-..+    --+.+-++...|++.++.++..+-...+ -++- -.|.+-..        
T Consensus       105 i------kPtEiYnLaAQSHVkvSFd----lpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfY-QAstSElyGkv~e~PQ  172 (376)
T KOG1372|consen  105 I------KPTEVYNLAAQSHVKVSFD----LPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFY-QASTSELYGKVQEIPQ  172 (376)
T ss_pred             c------CchhhhhhhhhcceEEEee----cccceeeccchhhhhHHHHHHhcCcccc-eeEE-ecccHhhcccccCCCc
Confidence            5      4677788888765432112    1233446778899999998866533322 2232 23332222        


Q ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCCccccccCChhhh--HHHH--HHhhcCCCC
Q 035642          153 ----AAPLTPLYGPYNGAMNQLTKHLECEQA---KDNIRANSIAPGVIRTSLSDAIRHDPAKN--KIVE--GLVSRTPIC  221 (367)
Q Consensus       153 ----~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrvn~I~PG~v~t~~~~~~~~~~~~~--~~~~--~~~~~~p~~  221 (367)
                          ++.+.+.|+++|.+..-.+-.++..+.   =.||-+|.=+|--=.+-..+++...-..-  ...+  .+......+
T Consensus       173 sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~R  252 (376)
T KOG1372|consen  173 SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALR  252 (376)
T ss_pred             ccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhc
Confidence                334567899999876555545544432   23566665555322221111111000000  0000  011112345


Q ss_pred             CCCCHHHHHHHHHHHhCCC
Q 035642          222 RPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~  240 (367)
                      .|+...|-.++...++..+
T Consensus       253 DWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  253 DWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             ccchhHHHHHHHHHHHhcC
Confidence            6788899999988877433

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.07  E-value=1.3e-05  Score=75.31  Aligned_cols=81  Identities=21%  Similarity=0.218  Sum_probs=70.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHHHHhcCC----cEEEEEccCCCHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAG----FGAIIHTCSRNQTELNERLQEWKLKGL----KVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~----~G~~Vi~~~R~~~~~~~~~~~l~~~~~----~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      -++|-||||+-|..+++++..    +|....+.+||++++++.++...+..+    ...++.||.+|++++++++++   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            489999999999999999999    888999999999999999998876532    234788899999999999964   


Q ss_pred             HcCCCccEEEEcCCCCC
Q 035642           84 IFQGKLNLLVNNAAVAV  100 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~  100 (367)
                           ..+++||+|+..
T Consensus        84 -----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 -----ARVIVNCVGPYR   95 (423)
T ss_pred             -----hEEEEeccccce
Confidence                 579999999863

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.03  E-value=1.1e-05  Score=71.75  Aligned_cols=220  Identities=15%  Similarity=0.151  Sum_probs=131.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++||||+-|-+|..+|+.|-. -|. .|++.+.......-     -..|   -++-.|+-|..++++++-.      .+|
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~G---PyIy~DILD~K~L~eIVVn------~RI  111 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVG---PYIYLDILDQKSLEEIVVN------KRI  111 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccC---CchhhhhhccccHHHhhcc------ccc
Confidence            899999999999999998864 465 57776654432211     1112   2445699998888887642      689


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------C------CC
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------P------LT  157 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------~------~~  157 (367)
                      |-+||-.+....-     .+.+.--..++|+.|..++++.+..+-     -++..-|.+.++.+.      |      ..
T Consensus       112 dWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~k-----L~iFVPSTIGAFGPtSPRNPTPdltIQRPR  181 (366)
T KOG2774|consen  112 DWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKHK-----LKVFVPSTIGAFGPTSPRNPTPDLTIQRPR  181 (366)
T ss_pred             ceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHcC-----eeEeecccccccCCCCCCCCCCCeeeecCc
Confidence            9999987653211     111122346899999999999886652     223333444444321      1      23


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEE-ecCcccCCccccccCChhhhHHHHHHhhc------CCCCC--CCCHHH
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSI-APGVIRTSLSDAIRHDPAKNKIVEGLVSR------TPICR--PGEPDE  228 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I-~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~p~~~--~~~~~d  228 (367)
                      ..|+.||--.|.+-..+...+   |+..-++ .||.+...--..-..+.....+.+...+.      .|--|  +.--+|
T Consensus       182 TIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~d  258 (366)
T KOG2774|consen  182 TIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTD  258 (366)
T ss_pred             eeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHH
Confidence            579999999999888887765   5555555 36655332111111122222233333221      12112  234567


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      .-.+++.++...+....-.+++|.|=-+..
T Consensus       259 c~~~~~~~~~a~~~~lkrr~ynvt~~sftp  288 (366)
T KOG2774|consen  259 CMASVIQLLAADSQSLKRRTYNVTGFSFTP  288 (366)
T ss_pred             HHHHHHHHHhCCHHHhhhheeeeceeccCH
Confidence            777777666556666777788887754443

>PLN00106 malate dehydrogenase

Probab=97.99  E-value=4.5e-05  Score=72.73  Aligned_cols=146  Identities=14%  Similarity=0.044  Sum_probs=97.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|.||||+|.+|.+++..|+..|.  .++++++++.  +...-++.......  ...++++.+++.+.+        ...
T Consensus        20 KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------~~a   87 (323)
T PLN00106         20 KVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPA--QVRGFLGDDQLGDAL--------KGA   87 (323)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------CCC
Confidence            899999999999999999997775  7999999872  22122333222221  222444443444443        569


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-------------cCCCC
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-------------TAAPL  156 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-------------~~~~~  156 (367)
                      |++|++||.....      ...+.+.+..|+.....+.+.+.++    +..+|++++|-...             .+.+.
T Consensus        88 DiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~  157 (323)
T PLN00106         88 DLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKAGVYDP  157 (323)
T ss_pred             CEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHcCCCCc
Confidence            9999999985331      1235677888988877777776554    34456666664332             23455


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhC
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQA  179 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~  179 (367)
                      .-.|+.++.-.+.|-+.++.++.
T Consensus       158 ~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        158 KKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             ceEEEEecchHHHHHHHHHHHhC
Confidence            56788888777788899998875

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.96  E-value=5.3e-05  Score=63.03  Aligned_cols=78  Identities=18%  Similarity=0.359  Sum_probs=58.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ +++|.|| ||.|++++..|++.|++ |.++.|+.++++++.+.+.  +..+.++..  .+.   .+..       
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~~---~~~~-------   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--EDL---EEAL-------   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GGH---CHHH-------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HHH---HHHH-------
Confidence            4556 9999998 99999999999999995 9999999999999999882  334555443  222   2222       


Q ss_pred             CCCccEEEEcCCCCCC
Q 035642           86 QGKLNLLVNNAAVAVP  101 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~  101 (367)
                       ...|++|++.+...+
T Consensus        74 -~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   74 -QEADIVINATPSGMP   88 (135)
T ss_dssp             -HTESEEEE-SSTTST
T ss_pred             -hhCCeEEEecCCCCc
Confidence             468999999886543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.95  E-value=5.6e-05  Score=72.01  Aligned_cols=145  Identities=17%  Similarity=0.058  Sum_probs=91.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|.|||++|.||.+++..|+.+|  ..+++++++.  ++....++......  ....+.+|+++..+.+        ...
T Consensus        10 KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l--------~ga   77 (321)
T PTZ00325         10 KVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKAL--------RGA   77 (321)
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHh--------CCC
Confidence            89999999999999999999666  4799999943  22222233332222  2233566654433333        468


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc-------------ccCCCC
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG-------------VTAAPL  156 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~-------------~~~~~~  156 (367)
                      |+||++||.....      .+.+.+.+..|+.....+.+++.+    .+..++|+++|...             ..+.|.
T Consensus        78 DvVVitaG~~~~~------~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~  147 (321)
T PTZ00325         78 DLVLICAGVPRKP------GMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDP  147 (321)
T ss_pred             CEEEECCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhhhhccCCCh
Confidence            9999999974321      123567788888877777666644    45567888887432             123344


Q ss_pred             CccHHHHHHHHHHHHHHHHHHh
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQ  178 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~  178 (367)
                      ...|+.+-.=-..|-+.+++.+
T Consensus       148 ~~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325        148 RKLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             hheeechhHHHHHHHHHHHHHh
Confidence            4567765222335666677765

>PRK09620 hypothetical protein; Provisional

Probab=97.88  E-value=2.1e-05  Score=71.44  Aligned_cols=83  Identities=20%  Similarity=0.168  Sum_probs=50.5

Q ss_pred             CC-eEEEEcCC----------------ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHH
Q 035642           10 EQ-NYFITGGT----------------RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE   72 (367)
Q Consensus        10 ~~-~vLVTGas----------------~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~   72 (367)
                      +| +||||+|.                |.||.++|++|+++|+.|+++++.......   ... .+.....+..|.    
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~----   73 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGII----   73 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHH----
Confidence            35 89999886                999999999999999999988764221000   000 012233333321    


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPK  102 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~  102 (367)
                      ++.+.+.++.+.  .++|++||+|++....
T Consensus        74 d~~~~l~~~~~~--~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         74 DLQDKMKSIITH--EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHHhcc--cCCCEEEECcccccee
Confidence            222233332221  3589999999996543

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.84  E-value=9.8e-05  Score=70.64  Aligned_cols=73  Identities=22%  Similarity=0.222  Sum_probs=54.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHC-C-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGF-G-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~-G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++ +|+||||+|.||++++++|+++ | .++++++|+.+++..+.+++..         .|+.   ++++.+      
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~~l------  213 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEEAL------  213 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHHHH------
Confidence            4566 9999999999999999999864 6 4899999998888777665521         1222   222222      


Q ss_pred             cCCCccEEEEcCCCCC
Q 035642           85 FQGKLNLLVNNAAVAV  100 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~  100 (367)
                        ...|++||.++...
T Consensus       214 --~~aDiVv~~ts~~~  227 (340)
T PRK14982        214 --PEADIVVWVASMPK  227 (340)
T ss_pred             --ccCCEEEECCcCCc
Confidence              56899999999753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.83  E-value=9.2e-05  Score=74.07  Aligned_cols=77  Identities=18%  Similarity=0.282  Sum_probs=57.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ +++|+|+++ +|.++|+.|+++|++|.+++++. +..++..+++...+  +.++..|..+.            ..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence            4555 999999877 99999999999999999999985 44444455554434  44666777651            12


Q ss_pred             CCCccEEEEcCCCCC
Q 035642           86 QGKLNLLVNNAAVAV  100 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~  100 (367)
                       +..|+||+++|+..
T Consensus        67 -~~~d~vv~~~g~~~   80 (450)
T PRK14106         67 -EGVDLVVVSPGVPL   80 (450)
T ss_pred             -hcCCEEEECCCCCC
Confidence             57899999999753

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.80  E-value=8.7e-05  Score=71.04  Aligned_cols=117  Identities=11%  Similarity=0.112  Sum_probs=66.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-------CEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-------AIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-------~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +|+||||+|.+|.+++..|+..|       ..|++.+++..  +++...-++....  . ....|+....+..+.+    
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~--~-~~~~~~~~~~~~~~~l----   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA--F-PLLKSVVATTDPEEAF----   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc--c-cccCCceecCCHHHHh----
Confidence            69999999999999999999854       58999999653  2222111111000  0 0111332222322222    


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                          ...|+|||+||.....   ..+.   .+.+..|+.-.-.+.+.+.++-  ...+.++++|.
T Consensus        77 ----~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i~~~i~~~i~~~~--~~~~iiivvsN  129 (325)
T cd01336          77 ----KDVDVAILVGAMPRKE---GMER---KDLLKANVKIFKEQGEALDKYA--KKNVKVLVVGN  129 (325)
T ss_pred             ----CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecC
Confidence                5699999999985432   1122   4566677654444444443331  12566777765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.69  E-value=0.0007  Score=63.55  Aligned_cols=77  Identities=14%  Similarity=0.266  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|.++++.+...|++|+.++++.++.+.+. .+   +.+.   .+|..+.+..+.+.+.. ..  ..+|
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~-~~--~~~d  215 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GADA---VFNYRAEDLADRILAAT-AG--QGVD  215 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCcCHHHHHHHHc-CC--CceE
Confidence            49999999999999999999999999999999887665542 22   3222   23555555444443322 11  3699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+++++|
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.61  E-value=0.00018  Score=67.25  Aligned_cols=80  Identities=18%  Similarity=0.153  Sum_probs=65.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            8 SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         8 ~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+...++|-||+|..|.-++++|+.+|.+-.+.+||.+++..+...+   |.++..+.++  +++.+++++        .
T Consensus         4 e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~--~p~~~~~~~--------~   70 (382)
T COG3268           4 EREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLG--VPAALEAMA--------S   70 (382)
T ss_pred             CcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCC--CHHHHHHHH--------h
Confidence            34447999999999999999999999999999999999999988887   4455444444  377766666        4


Q ss_pred             CccEEEEcCCCCC
Q 035642           88 KLNLLVNNAAVAV  100 (367)
Q Consensus        88 ~iD~lI~~Ag~~~  100 (367)
                      +.++|+||+|++.
T Consensus        71 ~~~VVlncvGPyt   83 (382)
T COG3268          71 RTQVVLNCVGPYT   83 (382)
T ss_pred             cceEEEecccccc
Confidence            6899999999864

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.47  E-value=0.00072  Score=57.89  Aligned_cols=159  Identities=16%  Similarity=0.152  Sum_probs=101.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.+.+ .++|.||||-.|..+.+++++.+-  +|+++.|.+.--.       +.+..+.....|.+..++.....     
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~~-----   81 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATNE-----   81 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhhh-----
Confidence            34445 799999999999999999999984  7999988752211       11334555666877665544433     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                         ..+|+++++-|......-.       +..+.+..--.+.+.+++    ++++...++.+||..+...  ....|--.
T Consensus        82 ---qg~dV~FcaLgTTRgkaGa-------dgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~s--SrFlY~k~  145 (238)
T KOG4039|consen   82 ---QGPDVLFCALGTTRGKAGA-------DGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPS--SRFLYMKM  145 (238)
T ss_pred             ---cCCceEEEeeccccccccc-------CceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCcc--cceeeeec
Confidence               4689999998875332111       111112211223333433    4567789999999877544  34568778


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccc
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD  199 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~  199 (367)
                      |.-++.=+-.|--      =++..+.||.+......
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGERTE  175 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceeccccc
Confidence            8877765554432      25677899998766443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.45  E-value=0.0034  Score=59.45  Aligned_cols=77  Identities=18%  Similarity=0.353  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|.++++.+...|++|++++++.++.+.+ ..+   +...   ..|..+.+..+.+.+....   +++|
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~~---~~~~~~~~~~~~~~~~~~~---~~~d  237 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GADY---VIDYRKEDFVREVRELTGK---RGVD  237 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCe---EEecCChHHHHHHHHHhCC---CCCc
Confidence            3999999999999999999999999999999998766544 222   3221   2366666655555543321   4699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++++++|
T Consensus       238 ~~i~~~g  244 (342)
T cd08266         238 VVVEHVG  244 (342)
T ss_pred             EEEECCc
Confidence            9999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd00704 MDH Malate dehydrogenase

Probab=97.35  E-value=0.002  Score=61.57  Aligned_cols=110  Identities=15%  Similarity=0.136  Sum_probs=64.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHH----HHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQRE----KLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~----~~~   78 (367)
                      +|.||||+|.+|.+++..|+..|.       .+++.++++  +.++              ....|+.|.....    .+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            589999999999999999998663       499999986  4332              2233444431000    000


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC--CCCEEEEec
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS--GNGIIVFIS  146 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~--~~g~IV~iS  146 (367)
                      ....+.+ ...|++|++||.....   ..+   -.+.+..|..-.-.+    .+.+.+.  ..+.++++|
T Consensus        68 ~~~~~~~-~~aDiVVitAG~~~~~---g~t---R~dll~~N~~i~~~i----~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAF-KDVDVAILVGAFPRKP---GME---RADLLRKNAKIFKEQ----GEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHh-CCCCEEEEeCCCCCCc---CCc---HHHHHHHhHHHHHHH----HHHHHHhCCCCeEEEEeC
Confidence            1112222 5799999999975322   123   234556665544444    4444443  356666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.32  E-value=0.0015  Score=55.26  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=55.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .++ +++|+|+ |++|.++++.|++.| ++|.+++|+.++.++..+++....     +..+.++.++.   +        
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~--------   79 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL---L--------   79 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc---c--------
Confidence            344 8999998 899999999999996 789999999988887777664221     12233443322   1        


Q ss_pred             CCccEEEEcCCCCC
Q 035642           87 GKLNLLVNNAAVAV  100 (367)
Q Consensus        87 g~iD~lI~~Ag~~~  100 (367)
                      ...|++|++.....
T Consensus        80 ~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 AEADLIINTTPVGM   93 (155)
T ss_pred             ccCCEEEeCcCCCC
Confidence            56899999998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.29  E-value=0.0087  Score=50.10  Aligned_cols=112  Identities=16%  Similarity=0.150  Sum_probs=74.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---C-CcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK---G-LKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~---~-~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|+||+|.+|.+++..|+..|.  +++++++++++++....++...   . .......   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            588999999999999999999885  7999999998888777776542   1 1222222   22221           1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                       ...|++|.+||.....   ..+   -.+.+..|..-...+.+.+.++   ...+.++.+|-
T Consensus        68 -~~aDivvitag~~~~~---g~s---R~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtN  119 (141)
T PF00056_consen   68 -KDADIVVITAGVPRKP---GMS---RLDLLEANAKIVKEIAKKIAKY---APDAIVIVVTN  119 (141)
T ss_dssp             -TTESEEEETTSTSSST---TSS---HHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SS
T ss_pred             -ccccEEEEeccccccc---ccc---HHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCC
Confidence             4689999999975321   123   3455677776666666666554   34566776654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.29  E-value=0.00099  Score=62.40  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=54.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.+ +++|+|+ ||+|++++..|++.| .+|++++|+.++++++.+.+.... .+.+   ++    +..+.       .
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~~~-------~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQEE-------L  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cchhc-------c
Confidence            3455 8999997 999999999999999 689999999999888887764321 1111   11    11111       1


Q ss_pred             CCCccEEEEcCCCCC
Q 035642           86 QGKLNLLVNNAAVAV  100 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~  100 (367)
                       ...|++||+.....
T Consensus       184 -~~~DivInaTp~g~  197 (278)
T PRK00258        184 -ADFDLIINATSAGM  197 (278)
T ss_pred             -ccCCEEEECCcCCC
Confidence             46899999987653

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.28  E-value=0.0022  Score=61.39  Aligned_cols=115  Identities=16%  Similarity=0.150  Sum_probs=67.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHH--HHH--HH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQRE--KLM--ET   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~--~~~--~~   80 (367)
                      +|.|+||+|.+|.+++..|+..|.       .+++.+++++..            .......|+.|.....  ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            478999999999999999998664       499999865421            1222334555544111  000  01


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..+.+ ...|++|++||.....      .+.+.+.+..|+.-.-.+.+.+.++  .+..+.|+++|-
T Consensus        69 ~~~~~-~~aDiVVitAG~~~~~------~~tr~~ll~~N~~i~k~i~~~i~~~--~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAF-TDVDVAILVGAFPRKE------GMERRDLLSKNVKIFKEQGRALDKL--AKKDCKVLVVGN  126 (324)
T ss_pred             hHHHh-CCCCEEEEcCCCCCCC------CCcHHHHHHHHHHHHHHHHHHHHhh--CCCCeEEEEeCC
Confidence            11223 5799999999975321      1234566777765555555444432  113466777664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.22  E-value=0.0029  Score=58.96  Aligned_cols=73  Identities=18%  Similarity=0.320  Sum_probs=54.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+ ||+|++++..|++.|++|.+++|+.++++++.+.+...+ .......|     +   .      .. ...|
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~---~------~~-~~~D  180 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----E---L------PL-HRVD  180 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----h---h------cc-cCcc
Confidence            38999998 699999999999999999999999999888888775433 22222111     1   0      01 4689


Q ss_pred             EEEEcCCCCC
Q 035642           91 LLVNNAAVAV  100 (367)
Q Consensus        91 ~lI~~Ag~~~  100 (367)
                      ++||+.+...
T Consensus       181 ivInatp~gm  190 (270)
T TIGR00507       181 LIINATSAGM  190 (270)
T ss_pred             EEEECCCCCC
Confidence            9999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.20  E-value=0.00088  Score=66.95  Aligned_cols=80  Identities=19%  Similarity=0.253  Sum_probs=53.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.+ +++|||+++ +|.++|+.|++.|++|++.+++........+.+...+.++  ...+  +...+   .+       
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~--~~~~--~~~~~---~~-------   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKV--ICGS--HPLEL---LD-------   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEE--EeCC--CCHHH---hc-------
Confidence            3455 899999976 9999999999999999999987644444444454434322  2211  11111   11       


Q ss_pred             CCccEEEEcCCCCCCC
Q 035642           87 GKLNLLVNNAAVAVPK  102 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~  102 (367)
                      ..+|+||+++|+....
T Consensus        67 ~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             CcCCEEEECCCCCCCC
Confidence            2489999999986543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.15  E-value=0.002  Score=65.76  Aligned_cols=46  Identities=17%  Similarity=0.195  Sum_probs=40.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++ +++|+|| ||+|++++..|++.|++|++++|+.++++++.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3455 8999999 69999999999999999999999998888877765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.11  E-value=0.0032  Score=60.40  Aligned_cols=77  Identities=17%  Similarity=0.370  Sum_probs=52.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      +++||+||+||+|...++-....|+.++++..+.++.+ ..+++   |.....   |..+.+    +.+++.+..++ ++
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~vi---~y~~~~----~~~~v~~~t~g~gv  212 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHVI---NYREED----FVEQVRELTGGKGV  212 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEEE---cCCccc----HHHHHHHHcCCCCc
Confidence            39999999999999999988899988777777776665 44443   443322   344433    33333333324 59


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999883

>PRK06849 hypothetical protein; Provisional

Probab=97.10  E-value=0.0053  Score=60.28  Aligned_cols=82  Identities=9%  Similarity=0.036  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .++|||||++..+|.++++.|.+.|++|++++.+........+..    .....+...-.+++...+.+.++.++.  ++
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~--~i   77 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE--NI   77 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc--CC
Confidence            349999999999999999999999999999998865433222222    122222222345555555555555554  58


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |++|-...
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99998775

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.09  E-value=0.0064  Score=72.11  Aligned_cols=174  Identities=13%  Similarity=0.092  Sum_probs=109.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .++|++.++++|.+++++|.++|+.|+.+..... .......+   +..+..+.+.-.|..++..+++.+.+.. ++++.
T Consensus      1757 ~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 1831 (2582)
T TIGR02813      1757 NALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL---ASAIASVTLGTIDDTSIEAVIKDIEEKT-AQIDG 1831 (2582)
T ss_pred             eeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc---ccccccccccccchHHHHHHHHhhhccc-cccce
Confidence            7888888899999999999999999887642211 00000000   1122233444455677788877776665 78999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH--------HHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY--------GPY  163 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y--------~as  163 (367)
                      +||..+...... ...+.......-...+...|.+.|.+.+.+...+.+.++.+|+..|-.+..+...-        ...
T Consensus      1832 ~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~ 1910 (2582)
T TIGR02813      1832 FIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELN 1910 (2582)
T ss_pred             EEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchh
Confidence            999877543210 00000001111113345567788877666655566789999998877665433221        235


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPG  191 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG  191 (367)
                      .+++.+|+|+++.|+....+|...+.|.
T Consensus      1911 ~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1911 QAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             hhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            7899999999999997666777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.06  E-value=0.013  Score=57.12  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=53.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+ |.+|+.+++.+...|++|++++|+.++++.+...+   +..   +..+..+.+.+.+.+        ...|+
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l--------~~aDv  233 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV--------KRADL  233 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH--------ccCCE
Confidence            7889988 89999999999999999999999988776654443   221   223455555554444        45799


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|++++.
T Consensus       234 VI~a~~~  240 (370)
T TIGR00518       234 LIGAVLI  240 (370)
T ss_pred             EEEcccc
Confidence            9999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.05  E-value=0.0035  Score=54.97  Aligned_cols=76  Identities=22%  Similarity=0.244  Sum_probs=46.8

Q ss_pred             eEEEEcCC----------------ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Q 035642           12 NYFITGGT----------------RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQRE   75 (367)
Q Consensus        12 ~vLVTGas----------------~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~   75 (367)
                      +||||+|.                |-.|.++|+.++.+|++|+++..... ...        ...+..+  ++.+.+++.
T Consensus         5 ~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa~em~   73 (185)
T PF04127_consen    5 KVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESAEEML   73 (185)
T ss_dssp             EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSHHHHH
T ss_pred             EEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecchhhhh
Confidence            78888764                88999999999999999999877642 110        1234443  445544444


Q ss_pred             HHHHHHHHHcCCCccEEEEcCCCCCCC
Q 035642           76 KLMETVSSIFQGKLNLLVNNAAVAVPK  102 (367)
Q Consensus        76 ~~~~~~~~~~~g~iD~lI~~Ag~~~~~  102 (367)
                      +.+   .+.+ ..-|++|++|++....
T Consensus        74 ~~~---~~~~-~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   74 EAV---KELL-PSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHH---HHHG-GGGSEEEE-SB--SEE
T ss_pred             hhh---cccc-CcceeEEEecchhhee
Confidence            444   4444 4569999999997543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.01  E-value=0.0045  Score=58.93  Aligned_cols=114  Identities=17%  Similarity=0.065  Sum_probs=64.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAG---FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~---~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|.||+|+||.+++..|..   .++.+++.+|++. .+...-++...+... .+..  .+.+++.+.+        ..
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~-~i~~--~~~~d~~~~l--------~~   69 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAV-KIKG--FSGEDPTPAL--------EG   69 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCc-eEEE--eCCCCHHHHc--------CC
Confidence            589999999999999998854   2457888888743 211111222211111 1111  1111221222        35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      .|++|.++|......   .+   -.+.+..|......+.+.+.+    .+..++|.+.|
T Consensus        70 ~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~~ii~~i~~----~~~~~ivivvs  118 (312)
T PRK05086         70 ADVVLISAGVARKPG---MD---RSDLFNVNAGIVKNLVEKVAK----TCPKACIGIIT  118 (312)
T ss_pred             CCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEcc
Confidence            999999999754321   12   235567777666666555544    34455666655

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.00  E-value=0.0096  Score=56.55  Aligned_cols=112  Identities=13%  Similarity=0.094  Sum_probs=71.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|.|+ |++|.+++..|+..|  ..|+++++++++++....++...    +.......   .+.+   . +       
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~---~-l-------   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS---D-C-------   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH---H-h-------
Confidence            5788896 999999999999999  48999999999888887777542    11222221   2221   1 1       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                       ...|++|+++|.....   ..+.   .+.+..|..-...+.+.+.++   ...+.|+++|-.
T Consensus        67 -~~aDIVIitag~~~~~---g~~R---~dll~~N~~i~~~~~~~i~~~---~~~~~vivvsNP  119 (306)
T cd05291          67 -KDADIVVITAGAPQKP---GETR---LDLLEKNAKIMKSIVPKIKAS---GFDGIFLVASNP  119 (306)
T ss_pred             -CCCCEEEEccCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEecCh
Confidence             4689999999975321   1222   344556655544554444432   335677777653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.94  E-value=0.017  Score=53.70  Aligned_cols=141  Identities=11%  Similarity=0.106  Sum_probs=78.2

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCCcEEEEEc-c
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGLKVTGSVC-D   67 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~~~~~~~~-D   67 (367)
                      .+ +|+|.|+ ||+|.++|+.|+..|. ++.+++.+.                   .+.+.+.+.+..-+..+.+... +
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~  107 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD  107 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence            44 7888876 7999999999999995 788887652                   2233334444433333322222 2


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           68 LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        68 lsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      .-+++.+.+++.       ...|+||.+....                     ..-..+.+.+.    +.+ -.+|..++
T Consensus       108 ~i~~e~~~~ll~-------~~~D~VIdaiD~~---------------------~~k~~L~~~c~----~~~-ip~I~~gG  154 (268)
T PRK15116        108 FITPDNVAEYMS-------AGFSYVIDAIDSV---------------------RPKAALIAYCR----RNK-IPLVTTGG  154 (268)
T ss_pred             ccChhhHHHHhc-------CCCCEEEEcCCCH---------------------HHHHHHHHHHH----HcC-CCEEEECC
Confidence            323444444431       3577777776521                     11112233332    222 33555544


Q ss_pred             cccccCCCCCccHHHHHHHHHHHHHHHHHHhCC-CCeE
Q 035642          148 VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK-DNIR  184 (367)
Q Consensus       148 ~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gIr  184 (367)
                      .++...+...-.-..+|.....|++.+++++.+ +||+
T Consensus       155 ag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        155 AGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             cccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            444433222223344566677899999999987 5764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.93  E-value=0.0019  Score=59.64  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=56.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|||+- |+.++++|.++|+.|+++.++....+.+.+    .+  ...+..+.-+.+++.+++.+      .++|+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCCE
Confidence            5999999998 999999999999999999998865433321    11  22344566777777777754      57999


Q ss_pred             EEEcCCCC
Q 035642           92 LVNNAAVA   99 (367)
Q Consensus        92 lI~~Ag~~   99 (367)
                      ||+.+.++
T Consensus        69 VIDAtHPf   76 (256)
T TIGR00715        69 LVDATHPF   76 (256)
T ss_pred             EEEcCCHH
Confidence            99998854

This enzyme was found to be a monomer by gel filtration.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.91  E-value=0.0049  Score=58.94  Aligned_cols=154  Identities=11%  Similarity=0.079  Sum_probs=92.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +|.|+||+|.+|.+++..|+..|.       .+++.+.+++  +++..+.++......... .+.++. +.. +      
T Consensus         4 KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~~-~------   74 (322)
T cd01338           4 RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD-DPN-V------   74 (322)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec-CcH-H------
Confidence            799999999999999999998885       6999998543  344444444332100000 001111 111 1      


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccc--------c-
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGV--------T-  152 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~--------~-  152 (367)
                       .+ ..-|++|.+||.....   ..+.   .+.+..|+.-.-.+...+.++   . ..+.|+++|-..-.        . 
T Consensus        75 -~~-~daDivvitaG~~~k~---g~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~iiivvsNPvD~~t~~~~k~sg  143 (322)
T cd01338          75 -AF-KDADWALLVGAKPRGP---GMER---ADLLKANGKIFTAQGKALNDV---ASRDVKVLVVGNPCNTNALIAMKNAP  143 (322)
T ss_pred             -Hh-CCCCEEEEeCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHhh---CCCCeEEEEecCcHHHHHHHHHHHcC
Confidence             12 5689999999975321   2232   344566655444444444332   2 25677777643211        2 


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCC--CCeEE
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAK--DNIRA  185 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~--~gIrv  185 (367)
                      +.|....|+.++.--..|.+.+++.++-  ..|+.
T Consensus       144 ~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         144 DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            2555668888999999999999998753  24553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.89  E-value=0.0056  Score=58.64  Aligned_cols=77  Identities=6%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+||+|++|..+++.+...|++|+.++++.++.+.+.+.+   |....   .|-.+.+++.+.+.+..   ++++|+
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~~---~~gvd~  224 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDDA---FNYKEEPDLDAALKRYF---PNGIDI  224 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCcee---EEcCCcccHHHHHHHhC---CCCcEE
Confidence            9999999999999999888899999999999988766655433   33221   23222223333333332   246999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       225 v~d~~g  230 (338)
T cd08295         225 YFDNVG  230 (338)
T ss_pred             EEECCC
Confidence            999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.88  E-value=0.019  Score=54.69  Aligned_cols=111  Identities=13%  Similarity=0.086  Sum_probs=72.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|+ |++|.+++..|+..|.  .++++++++++++....++....   .+.... .  .+   .++ +        
T Consensus         8 ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~~~-~--------   71 (315)
T PRK00066          8 KVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---YSD-C--------   71 (315)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---HHH-h--------
Confidence            8999998 9999999999999997  79999999988887777776432   122221 1  12   111 1        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus        72 ~~adivIitag~~~k~---g~~R---~dll~~N~~i~~~i~~~i~~~---~~~~~vivvsN  123 (315)
T PRK00066         72 KDADLVVITAGAPQKP---GETR---LDLVEKNLKIFKSIVGEVMAS---GFDGIFLVASN  123 (315)
T ss_pred             CCCCEEEEecCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccC
Confidence            4689999999975321   1233   344566655444444444332   33567777764

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.87  E-value=0.015  Score=58.79  Aligned_cols=108  Identities=13%  Similarity=0.160  Sum_probs=68.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-------------HHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-------------EQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-------------~sv~~~~   78 (367)
                      +|+|+|+ |.+|...+..+...|++|++++++.++++...+ +   |.+..  ..|..+.             +..++..
T Consensus       167 kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v--~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        167 KVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFL--ELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEE--EeccccccccccchhhhcchhHHHHHH
Confidence            9999998 899999999999999999999999988765543 3   54432  2233221             1112222


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      +.+.+.. +..|++|.++|......                   +..+++..+..|+  .+|.||.++..
T Consensus       240 ~~~~~~~-~gaDVVIetag~pg~~a-------------------P~lit~~~v~~mk--pGgvIVdvg~~  287 (509)
T PRK09424        240 ALFAEQA-KEVDIIITTALIPGKPA-------------------PKLITAEMVASMK--PGSVIVDLAAE  287 (509)
T ss_pred             HHHHhcc-CCCCEEEECCCCCcccC-------------------cchHHHHHHHhcC--CCCEEEEEccC
Confidence            2222222 46999999999743221                   1222344555554  46889988763

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.86  E-value=0.0062  Score=58.85  Aligned_cols=77  Identities=8%  Similarity=0.236  Sum_probs=53.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+||+|++|..+++.+...|++|+.++++.++.+.+.+++   |.+..   .|-.+.+.+.+.+.+.   .++++|+
T Consensus       161 ~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~---~~~gvD~  231 (348)
T PLN03154        161 SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRY---FPEGIDI  231 (348)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHH---CCCCcEE
Confidence            9999999999999999888889999999999888766554344   33322   2333222333333332   2246999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       232 v~d~vG  237 (348)
T PLN03154        232 YFDNVG  237 (348)
T ss_pred             EEECCC
Confidence            999887

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.85  E-value=0.0058  Score=58.52  Aligned_cols=77  Identities=9%  Similarity=0.139  Sum_probs=53.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .++||+||+|++|.++++.....|+ +|+.+++++++.+.+.+++   |....   .|-.+. ++.+.+.++   .++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~~-~~~~~i~~~---~~~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKTD-NVAERLREL---CPEGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCCC-CHHHHHHHH---CCCCc
Confidence            4999999999999999988888999 7999999988776665544   33322   233332 233333332   22469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++++.|
T Consensus       226 d~vid~~g  233 (345)
T cd08293         226 DVYFDNVG  233 (345)
T ss_pred             eEEEECCC
Confidence            99999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.84  E-value=0.021  Score=51.94  Aligned_cols=142  Identities=13%  Similarity=0.102  Sum_probs=80.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~~Dls   69 (367)
                      +|+|.|. ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+.  ++..+...++
T Consensus        13 ~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~   91 (231)
T cd00755          13 HVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLT   91 (231)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecC
Confidence            7888887 7999999999999998 788887652                   234444555544333  3343433333


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                       ++....++.       ...|++|.+...          .+           .-..+.+.+..    .+ -.+|...+.+
T Consensus        92 -~~~~~~l~~-------~~~D~VvdaiD~----------~~-----------~k~~L~~~c~~----~~-ip~I~s~g~g  137 (231)
T cd00755          92 -PDNSEDLLG-------GDPDFVVDAIDS----------IR-----------AKVALIAYCRK----RK-IPVISSMGAG  137 (231)
T ss_pred             -HhHHHHHhc-------CCCCEEEEcCCC----------HH-----------HHHHHHHHHHH----hC-CCEEEEeCCc
Confidence             344444431       357888877541          11           11222233322    22 2344444433


Q ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeE--EEEE
Q 035642          150 GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR--ANSI  188 (367)
Q Consensus       150 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIr--vn~I  188 (367)
                      +.........-..+|.-...+++.+++++.++|++  +.+|
T Consensus       138 ~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v  178 (231)
T cd00755         138 GKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVV  178 (231)
T ss_pred             CCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEE
Confidence            33222222222344566677899999999888775  4444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.83  E-value=0.0065  Score=57.82  Aligned_cols=76  Identities=9%  Similarity=0.183  Sum_probs=52.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++||+||+|++|..+++.+...|++|+.++++.++.+.+ +++   |.+..   .|-.+.+...+.++...   ++++|+
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~~~~~~---~~gvdv  210 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDVA---FNYKTVKSLEETLKKAS---PDGYDC  210 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCEE---EeccccccHHHHHHHhC---CCCeEE
Confidence            999999999999999988888999999999988776554 333   43322   23333333444443332   146999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       211 v~d~~G  216 (325)
T TIGR02825       211 YFDNVG  216 (325)
T ss_pred             EEECCC
Confidence            999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.77  E-value=0.0072  Score=56.74  Aligned_cols=78  Identities=22%  Similarity=0.231  Sum_probs=54.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++++.+.... .+.    .+...++.....        
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~----~~~~~~~~~~~~--------  188 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT----RLEGDSGGLAIE--------  188 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce----eccchhhhhhcc--------
Confidence            344 8999987 9999999999999997 79999999999998888764321 111    111112221111        


Q ss_pred             CCccEEEEcCCCCC
Q 035642           87 GKLNLLVNNAAVAV  100 (367)
Q Consensus        87 g~iD~lI~~Ag~~~  100 (367)
                      ...|+|||+.....
T Consensus       189 ~~~DiVInaTp~g~  202 (282)
T TIGR01809       189 KAAEVLVSTVPADV  202 (282)
T ss_pred             cCCCEEEECCCCCC
Confidence            45899999987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.75  E-value=0.012  Score=55.19  Aligned_cols=76  Identities=12%  Similarity=0.114  Sum_probs=54.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++++.+.+.+........+..  .   +++.+.+        
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~--------  190 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAAL--------  190 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhh--------
Confidence            344 8999998 8899999999999998 799999999999999888754332222222  1   1111111        


Q ss_pred             CCccEEEEcCCC
Q 035642           87 GKLNLLVNNAAV   98 (367)
Q Consensus        87 g~iD~lI~~Ag~   98 (367)
                      ...|+|||+...
T Consensus       191 ~~aDiVInaTp~  202 (284)
T PRK12549        191 AAADGLVHATPT  202 (284)
T ss_pred             CCCCEEEECCcC
Confidence            458999999543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.71  E-value=0.027  Score=53.01  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=36.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE   49 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~   49 (367)
                      +++.+ +++|.|+ |++|+++++.|...|++|.+++|+.++.+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            45666 9999999 779999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.70  E-value=0.012  Score=54.97  Aligned_cols=77  Identities=17%  Similarity=0.355  Sum_probs=53.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|..+++.+...|++|+.++++.++.+.+ +.+   +...   ..|..+.+..+.+.+.. ..  +++|
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~~--~~~d  210 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GADV---AINYRTEDFAEEVKEAT-GG--RGVD  210 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE---EEeCCchhHHHHHHHHh-CC--CCeE
Confidence            3999999999999999999999999999999988766554 333   3221   23444443333333222 11  4699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999998

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.67  E-value=0.0092  Score=59.01  Aligned_cols=73  Identities=12%  Similarity=0.221  Sum_probs=54.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ ||+|+.+++.|++.|+ ++.++.|+.++++.+.+++..  .  ..+     ..++..+.+        
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~--~~~-----~~~~l~~~l--------  240 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--A--SAH-----YLSELPQLI--------  240 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--C--eEe-----cHHHHHHHh--------
Confidence            455 8999998 9999999999999996 799999999988888777631  1  111     122333332        


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      ...|++|++.+..
T Consensus       241 ~~aDiVI~aT~a~  253 (414)
T PRK13940        241 KKADIIIAAVNVL  253 (414)
T ss_pred             ccCCEEEECcCCC
Confidence            5689999999854

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.62  E-value=0.02  Score=53.80  Aligned_cols=77  Identities=13%  Similarity=0.154  Sum_probs=53.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|.|| ||-|++++-.|++.|+ +|.++.|+.++++++.+.+............|   ..+.....        ...|
T Consensus       129 ~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~d  196 (283)
T PRK14027        129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI--------AAAD  196 (283)
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH--------hhcC
Confidence            8999998 9999999999999997 79999999999999888775322111111122   11221111        3479


Q ss_pred             EEEEcCCCCC
Q 035642           91 LLVNNAAVAV  100 (367)
Q Consensus        91 ~lI~~Ag~~~  100 (367)
                      ++||+..+..
T Consensus       197 ivINaTp~Gm  206 (283)
T PRK14027        197 GVVNATPMGM  206 (283)
T ss_pred             EEEEcCCCCC
Confidence            9999987643

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.62  E-value=0.015  Score=54.95  Aligned_cols=73  Identities=16%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|+||++++|+++++.+...|++|+.++++.++.+.+ +.+   +... .+  |.   +++.+.+.    .. ..+|
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---~~~~-~~--~~---~~~~~~~~----~~-~~~d  228 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KEL---GADY-VI--DG---SKFSEDVK----KL-GGAD  228 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHc---CCcE-EE--ec---HHHHHHHH----hc-cCCC
Confidence            3999999999999999999999999999999887665444 222   3221 11  22   11222222    22 4699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++++++|.
T Consensus       229 ~v~~~~g~  236 (332)
T cd08259         229 VVIELVGS  236 (332)
T ss_pred             EEEECCCh
Confidence            99999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.57  E-value=0.038  Score=50.32  Aligned_cols=75  Identities=17%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|+++ +|.++++.+...|.+|+++++++++.+.+ +.+   +...   ..|..+.+....+.  . .. ++.+|+
T Consensus       137 ~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~--~-~~-~~~~d~  204 (271)
T cd05188         137 TVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH---VIDYKEEDLEEELR--L-TG-GGGADV  204 (271)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce---eccCCcCCHHHHHH--H-hc-CCCCCE
Confidence            999999998 99999999999999999999987765544 222   3221   12433333333333  1 11 157999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +++++|.
T Consensus       205 vi~~~~~  211 (271)
T cd05188         205 VIDAVGG  211 (271)
T ss_pred             EEECCCC
Confidence            9999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.56  E-value=0.013  Score=54.80  Aligned_cols=81  Identities=25%  Similarity=0.286  Sum_probs=58.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.++ +++|.|| ||-+++++..|++.|+ +|.++.|+.++++++++.+...+..+..  .+..+.+...         
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~---------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE---------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence            34445 8999987 8999999999999996 7999999999999999998765432211  1222222111         


Q ss_pred             cCCCccEEEEcCCCCCCC
Q 035642           85 FQGKLNLLVNNAAVAVPK  102 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~  102 (367)
                         ..|++||+-......
T Consensus       190 ---~~dliINaTp~Gm~~  204 (283)
T COG0169         190 ---EADLLINATPVGMAG  204 (283)
T ss_pred             ---ccCEEEECCCCCCCC
Confidence               269999998775443

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.52  E-value=0.014  Score=55.42  Aligned_cols=75  Identities=9%  Similarity=0.199  Sum_probs=51.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++||+||+|++|..+++.....|++|+.++++.++.+.+.+ +   |.+..   .|-.+++..++ +.+.   .++++|+
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~~v---i~~~~~~~~~~-v~~~---~~~gvd~  214 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFDAV---FNYKTVSLEEA-LKEA---APDGIDC  214 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCEE---EeCCCccHHHH-HHHH---CCCCcEE
Confidence            99999999999999998888999999999998877655533 3   43322   24333322222 2222   1246999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.52  E-value=0.0048  Score=54.89  Aligned_cols=48  Identities=19%  Similarity=0.138  Sum_probs=40.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ..++++ +++|+|.+ .+|+++++.|.+.|++|++++++.++.++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            345677 99999995 8999999999999999999999988777665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.43  E-value=0.022  Score=52.86  Aligned_cols=116  Identities=13%  Similarity=0.094  Sum_probs=69.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC----CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           13 YFITGGTRGIGHAIVEELAGFG----AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G----~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +.|+||+|.+|..++..|+..|    ..|++.++++++++....+++......  ....++-.++..+.+        ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~--------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF--------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh--------CC
Confidence            4689998999999999999999    689999999988877777765431111  011111111122222        46


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      .|++|.++|.....   ..+.   ...+..|+.-...+.+.+.++   ...+.++++|-
T Consensus        71 aDiVv~t~~~~~~~---g~~r---~~~~~~n~~i~~~i~~~i~~~---~p~a~~i~~tN  120 (263)
T cd00650          71 ADVVIITAGVGRKP---GMGR---LDLLKRNVPIVKEIGDNIEKY---SPDAWIIVVSN  120 (263)
T ss_pred             CCEEEECCCCCCCc---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            89999999975432   1121   123334444444444444332   34567777754

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.40  E-value=0.035  Score=49.43  Aligned_cols=79  Identities=20%  Similarity=0.273  Sum_probs=53.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEEE
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKGL--KVTGSV   65 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~~--~~~~~~   65 (367)
                      +.+ +|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+.  ++..+.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            344 8999885 8999999999999998 89999887                   3455566666655433  334443


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           66 CDLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        66 ~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      .++. .+.+.+++        ...|++|.+..
T Consensus        98 ~~i~-~~~~~~~~--------~~~D~Vi~~~d  120 (202)
T TIGR02356        98 ERVT-AENLELLI--------NNVDLVLDCTD  120 (202)
T ss_pred             hcCC-HHHHHHHH--------hCCCEEEECCC
Confidence            3443 23333333        46788888764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.39  E-value=0.055  Score=51.97  Aligned_cols=72  Identities=18%  Similarity=0.218  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|+|+ |++|...++.+...|+ +|+++++++++.+.+. ++   |....   .|..+. ++.+..    +.. +.+|
T Consensus       172 ~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~-~~~~~~----~~~-g~~D  237 (343)
T PRK09880        172 RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADKL---VNPQND-DLDHYK----AEK-GYFD  237 (343)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcEE---ecCCcc-cHHHHh----ccC-CCCC
Confidence            9999986 9999999988888998 6888999988775443 33   43322   244332 233222    222 5699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.++|
T Consensus       238 ~vid~~G  244 (343)
T PRK09880        238 VSFEVSG  244 (343)
T ss_pred             EEEECCC
Confidence            9999998

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.35  E-value=0.03  Score=53.89  Aligned_cols=79  Identities=18%  Similarity=0.307  Sum_probs=55.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---------------------hHHHHHHHHHHhc--CCcEEE
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---------------------TELNERLQEWKLK--GLKVTG   63 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---------------------~~~~~~~~~l~~~--~~~~~~   63 (367)
                      +++ +|+|.|+ ||+|.++|+.|+..|. ++.++|++.                     .|++.+.+.+++.  +.++..
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            344 8999997 7899999999999998 888898863                     3455555666544  345566


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           64 SVCDLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        64 ~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +..|++ .+.+++++        ...|++|.+..
T Consensus       101 ~~~~~~-~~~~~~~~--------~~~DlVid~~D  125 (338)
T PRK12475        101 VVTDVT-VEELEELV--------KEVDLIIDATD  125 (338)
T ss_pred             EeccCC-HHHHHHHh--------cCCCEEEEcCC
Confidence            666775 33444443        46799888764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.30  E-value=0.024  Score=54.82  Aligned_cols=77  Identities=17%  Similarity=0.272  Sum_probs=51.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .+||.||+||+|.+.++-....|+.+++++++.++.+ +.+.+   |...   ..|-.+++-++...+..   . +++|+
T Consensus       160 ~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l---GAd~---vvdy~~~~~~e~~kk~~---~-~~~Dv  228 (347)
T KOG1198|consen  160 SVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL---GADE---VVDYKDENVVELIKKYT---G-KGVDV  228 (347)
T ss_pred             eEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc---CCcE---eecCCCHHHHHHHHhhc---C-CCccE
Confidence            9999999999999999988889965555556655543 33333   4322   23777744443333322   2 68999


Q ss_pred             EEEcCCCC
Q 035642           92 LVNNAAVA   99 (367)
Q Consensus        92 lI~~Ag~~   99 (367)
                      |+.|.|..
T Consensus       229 VlD~vg~~  236 (347)
T KOG1198|consen  229 VLDCVGGS  236 (347)
T ss_pred             EEECCCCC
Confidence            99999953

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.28  E-value=0.024  Score=51.31  Aligned_cols=74  Identities=18%  Similarity=0.263  Sum_probs=58.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .++|.|+ |-+|..+|+.|.++|++|++++++++..++..++    ......+.+|-++++.+.++=-       ...|+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi-------~~aD~   69 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI-------DDADA   69 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC-------CcCCE
Confidence            3566666 7899999999999999999999999887764442    1257788899999988877621       46788


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|-..|
T Consensus        70 vva~t~   75 (225)
T COG0569          70 VVAATG   75 (225)
T ss_pred             EEEeeC
Confidence            887776

>PRK14968 putative methyltransferase; Provisional

Probab=96.25  E-value=0.086  Score=45.66  Aligned_cols=74  Identities=18%  Similarity=0.146  Sum_probs=52.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK---VTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~---~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++|-.|++.|.   ++..+++.|.+|++++++++..+...+.+...+.+   +.++.+|+.+.     +.    +   ..
T Consensus        26 ~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~----~---~~   90 (188)
T PRK14968         26 RVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FR----G---DK   90 (188)
T ss_pred             EEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----cc----c---cC
Confidence            78888877665   55556666899999999998877776666544332   77888886542     11    1   36


Q ss_pred             ccEEEEcCCCCC
Q 035642           89 LNLLVNNAAVAV  100 (367)
Q Consensus        89 iD~lI~~Ag~~~  100 (367)
                      +|.++.|.....
T Consensus        91 ~d~vi~n~p~~~  102 (188)
T PRK14968         91 FDVILFNPPYLP  102 (188)
T ss_pred             ceEEEECCCcCC
Confidence            899999877654

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.21  E-value=0.022  Score=53.36  Aligned_cols=77  Identities=16%  Similarity=0.314  Sum_probs=52.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|.++++.+...|++|+.+.+++++.+.+ .++   +.+..   .+..+.+....+.+.. ..  +++|
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~~~~~~-~~--~~~d  210 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADIA---INYREEDFVEVVKAET-GG--KGVD  210 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcEE---EecCchhHHHHHHHHc-CC--CCeE
Confidence            4999999999999999999999999999999988766533 333   32211   2333333333333222 11  3599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+++++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.18  E-value=0.1  Score=52.75  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=55.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-------------HHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-------------REQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-------------~~sv~~~~   78 (367)
                      +++|.|+ |.+|...+..+...|+.|++++++.++++...+ +   +.  .++..|..+             .+..++..
T Consensus       166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga--~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~  238 (511)
T TIGR00561       166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GA--EFLELDFKEEGGSGDGYAKVMSEEFIAAEM  238 (511)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC--eEEeccccccccccccceeecCHHHHHHHH
Confidence            8999996 999999999999999999999999887654433 3   32  233344321             23333334


Q ss_pred             HHHHHHcCCCccEEEEcCCCC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~   99 (367)
                      +.+.++. ...|++|+++-+.
T Consensus       239 ~~~~e~~-~~~DIVI~Talip  258 (511)
T TIGR00561       239 ELFAAQA-KEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHh-CCCCEEEECcccC
Confidence            4444444 6799999999543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.18  E-value=0.048  Score=51.32  Aligned_cols=81  Identities=20%  Similarity=0.155  Sum_probs=52.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---TELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +.++ +++|.|| ||-+++++-.|+..|+ +|.++.|+.   ++++++.+.+.... ..+.+  .++.+.+.+.+     
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~-----  192 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAE-----  192 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhh-----
Confidence            3445 8999997 6779999999999997 799999995   47777777664321 11222  12211111111     


Q ss_pred             HHHcCCCccEEEEcCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~   99 (367)
                        .. .+.|++||+..+.
T Consensus       193 --~~-~~aDivINaTp~G  207 (288)
T PRK12749        193 --AL-ASADILTNGTKVG  207 (288)
T ss_pred             --hc-ccCCEEEECCCCC
Confidence              11 4689999987654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.15  E-value=0.029  Score=53.15  Aligned_cols=77  Identities=10%  Similarity=0.219  Sum_probs=52.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|+|+++++|.++++.+.+.|++|+.++++.++.+.+.+.+   +.. .+  .|..+.+..+.+. +..   ++.+|
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~v~-~~~---~~~~d  216 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEALK-EAA---PDGID  216 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHHHH-Hhc---cCCce
Confidence            39999999999999999999999999999999887765544323   321 11  1333333222222 221   14699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.15  E-value=0.024  Score=53.97  Aligned_cols=115  Identities=17%  Similarity=0.168  Sum_probs=69.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCCh--hHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQ--TELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~--~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++.|+||+|.+|.+++..|+..|.  .|++++|++  ++++....++...    +....   +..++  +... +     
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~--d~~~-l-----   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISS--DLSD-V-----   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECC--CHHH-h-----
Confidence            589999999999999999999986  499999955  4554444333321    11111   11111  1111 2     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                         ...|++|.++|.....   +.+.   .+.+..|+.-...+.+.+.++   ...+.||++++..
T Consensus        71 ---~~aDiViitag~p~~~---~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv  124 (309)
T cd05294          71 ---AGSDIVIITAGVPRKE---GMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV  124 (309)
T ss_pred             ---CCCCEEEEecCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence               5689999999974321   1232   244556666555565555443   2357788888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.15  E-value=0.039  Score=52.76  Aligned_cols=70  Identities=19%  Similarity=0.271  Sum_probs=52.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|++ |+|...++.....|++|+.++|++++++.+.+.    |.+..+   |-+|++..+++.+        .+|+
T Consensus       169 ~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~i---~~~~~~~~~~~~~--------~~d~  232 (339)
T COG1064         169 WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHVI---NSSDSDALEAVKE--------IADA  232 (339)
T ss_pred             EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEEE---EcCCchhhHHhHh--------hCcE
Confidence            99999998 999888887778999999999999987655443    444332   4345555555442        3799


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|.+++
T Consensus       233 ii~tv~  238 (339)
T COG1064         233 IIDTVG  238 (339)
T ss_pred             EEECCC
Confidence            999998

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.13  E-value=0.026  Score=56.39  Aligned_cols=72  Identities=19%  Similarity=0.255  Sum_probs=54.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH-HHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKL-METVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~-~~~~~~~~~g~iD   90 (367)
                      +++|.|+ |.+|+++++.|.++|+.|++++++.+..+.+.+.     ..+.++.+|.++.+.++++ +        .+.|
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~~~--------~~a~   67 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLREAGA--------EDAD   67 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHHcCC--------CcCC
Confidence            5888888 9999999999999999999999998876655432     2356677788887766554 2        3567


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+|.+.+
T Consensus        68 ~vi~~~~   74 (453)
T PRK09496         68 LLIAVTD   74 (453)
T ss_pred             EEEEecC
Confidence            7766654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.11  E-value=0.1  Score=46.89  Aligned_cols=42  Identities=26%  Similarity=0.305  Sum_probs=37.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999999999999999999999999999999887766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.11  E-value=0.035  Score=51.76  Aligned_cols=105  Identities=10%  Similarity=0.096  Sum_probs=70.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      |++|+||+|..|.-+.+--.-+|++|+.++-+.++.+-+.+++.   -+.   ..|-..+ ++.+   ++.+..+..||+
T Consensus       153 tvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~-d~~~---~L~~a~P~GIDv  222 (340)
T COG2130         153 TVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE-DFAQ---ALKEACPKGIDV  222 (340)
T ss_pred             EEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc-cHHH---HHHHHCCCCeEE
Confidence            99999999999987665555689999999999999887777652   111   1254444 3333   334444467999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      .+-|.|.-                          +..++++.|.  ..+||+..+-++.+...
T Consensus       223 yfeNVGg~--------------------------v~DAv~~~ln--~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         223 YFENVGGE--------------------------VLDAVLPLLN--LFARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEcCCch--------------------------HHHHHHHhhc--cccceeeeeehhhcCCC
Confidence            99999841                          1233455553  35889988777666543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.10  E-value=0.26  Score=46.62  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=34.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN   48 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~   48 (367)
                      ++.+ +++|.|. |++|+.++..|...|++|.+++|+.++.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            3445 9999997 78999999999999999999999976543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.09  E-value=0.095  Score=47.05  Aligned_cols=194  Identities=13%  Similarity=0.044  Sum_probs=115.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ..++-|+.+..|.++++.-...|..|..+.|+..+  +..   ......+.+...|.-..+-.+...        .++..
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l---~sw~~~vswh~gnsfssn~~k~~l--------~g~t~  120 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTL---SSWPTYVSWHRGNSFSSNPNKLKL--------SGPTF  120 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chh---hCCCcccchhhccccccCcchhhh--------cCCcc
Confidence            67899999999999999999999999999998652  222   222345666666554332222221        34566


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      ++.++|.+..          ...+-.+|=....+..+++.    +.+..++|++|....-.+.--...|--+|.+.|.-.
T Consensus       121 v~e~~ggfgn----------~~~m~~ing~ani~a~kaa~----~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~El  186 (283)
T KOG4288|consen  121 VYEMMGGFGN----------IILMDRINGTANINAVKAAA----KAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAEL  186 (283)
T ss_pred             cHHHhcCccc----------hHHHHHhccHhhHHHHHHHH----HcCCceEEEEEhhhcCCCCccchhhhccchHHHHHH
Confidence            6666665432          12333455555555666653    466789999987654222222336888888777532


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCCh----hhhHHHHHHh-------hcCC-----CCCCCCHHHHHHHHHH
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP----AKNKIVEGLV-------SRTP-----ICRPGEPDEVSSLVAF  235 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~----~~~~~~~~~~-------~~~p-----~~~~~~~~dvA~ai~~  235 (367)
                      ..      .++.|-..+.||++....  ......    ...+.++...       ...|     +.-...+++||.+++.
T Consensus       187 l~------~~~~rgiilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~  258 (283)
T KOG4288|consen  187 LK------KFRFRGIILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALK  258 (283)
T ss_pred             HH------hcCCCceeeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHH
Confidence            22      235666788999997652  221110    0001111111       1122     2335689999999999


Q ss_pred             HhCCC
Q 035642          236 LCFPA  240 (367)
Q Consensus       236 L~s~~  240 (367)
                      .+++.
T Consensus       259 ai~dp  263 (283)
T KOG4288|consen  259 AIEDP  263 (283)
T ss_pred             hccCC
Confidence            98643

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.03  E-value=0.011  Score=43.31  Aligned_cols=33  Identities=27%  Similarity=0.407  Sum_probs=22.2

Q ss_pred             CeEEEEcCCChhHHH--HHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHA--IVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~a--ia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++|||+|+|+|.|++  ++..| ..|++.+.+....
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            499999999999999  55555 7788888876543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.95  E-value=0.037  Score=55.06  Aligned_cols=71  Identities=14%  Similarity=0.291  Sum_probs=51.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ |.+|..+++.|...|+ +|++++|+.++++.+.+.+   +..  .+     +.++..+.+        
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l--------  240 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF---GGE--AI-----PLDELPEAL--------  240 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc--Ee-----eHHHHHHHh--------
Confidence            455 8999987 9999999999999998 7999999998887776665   221  11     222332222        


Q ss_pred             CCccEEEEcCCC
Q 035642           87 GKLNLLVNNAAV   98 (367)
Q Consensus        87 g~iD~lI~~Ag~   98 (367)
                      ...|++|.+.|.
T Consensus       241 ~~aDvVI~aT~s  252 (423)
T PRK00045        241 AEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEECCCC
Confidence            457999998874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.94  E-value=0.12  Score=50.02  Aligned_cols=71  Identities=17%  Similarity=0.309  Sum_probs=47.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|+ |+||..+++.....|++|++++.+.++..+..+++   |....   .|..+.+.+.+       .. +.+|+
T Consensus       186 ~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~~~~-------~~-~~~D~  250 (360)
T PLN02586        186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEKMKA-------AI-GTMDY  250 (360)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHHHHh-------hc-CCCCE
Confidence            8999765 99999999988899999988887766554444443   43222   13333322222       22 45899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|.+.|
T Consensus       251 vid~~g  256 (360)
T PLN02586        251 IIDTVS  256 (360)
T ss_pred             EEECCC
Confidence            999888

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.94  E-value=0.065  Score=51.64  Aligned_cols=79  Identities=19%  Similarity=0.305  Sum_probs=52.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---------------------hHHHHHHHHHHhcC--CcEEE
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---------------------TELNERLQEWKLKG--LKVTG   63 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---------------------~~~~~~~~~l~~~~--~~~~~   63 (367)
                      +.+ +|+|.|+ ||+|.++++.|+..|. ++.+++++.                     .+.+.+.+.+++.+  .++..
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            344 8999998 8999999999999998 899999863                     23444444554333  34555


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           64 SVCDLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        64 ~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +..|++. +.+.+++        .+.|++|.+..
T Consensus       101 ~~~~~~~-~~~~~~~--------~~~DlVid~~D  125 (339)
T PRK07688        101 IVQDVTA-EELEELV--------TGVDLIIDATD  125 (339)
T ss_pred             EeccCCH-HHHHHHH--------cCCCEEEEcCC
Confidence            5556643 3344443        45688887743

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.91  E-value=0.17  Score=48.62  Aligned_cols=39  Identities=18%  Similarity=0.329  Sum_probs=34.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      .+++|.|+ |++|..+++.+...|++|+.+++++++.+.+
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            39999999 9999999999999999999999998877644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.90  E-value=0.054  Score=52.99  Aligned_cols=76  Identities=18%  Similarity=0.304  Sum_probs=52.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKGL--KVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~~--~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..+.+.+.+.+.+.+.  ++..+...++
T Consensus       137 ~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~  215 (376)
T PRK08762        137 RVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVT  215 (376)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            7888866 8999999999999998 79999887                   4566666666655433  3334443443


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      + +.+.+++        ...|+||++..
T Consensus       216 ~-~~~~~~~--------~~~D~Vv~~~d  234 (376)
T PRK08762        216 S-DNVEALL--------QDVDVVVDGAD  234 (376)
T ss_pred             h-HHHHHHH--------hCCCEEEECCC
Confidence            2 3344333        35788888775

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.90  E-value=0.038  Score=44.07  Aligned_cols=71  Identities=25%  Similarity=0.213  Sum_probs=53.5

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      ++|.|. |.+|+.+++.|.+.+.+|++++++++..+.+.+.    +  +.++.+|.++++.++++--       .+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~i-------~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAGI-------EKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcCc-------cccCEE
Confidence            577787 5799999999999887999999999876655433    3  5678899999998887631       357777


Q ss_pred             EEcCC
Q 035642           93 VNNAA   97 (367)
Q Consensus        93 I~~Ag   97 (367)
                      |....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            77665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.88  E-value=0.092  Score=50.24  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=68.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCcEEEEE-ccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQ--TELNERLQEWKLKGLKVTGSV-CDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~-~Dlsd~~sv~~~~~~~   81 (367)
                      +|.|+||+|.+|.+++..|+..|.       .+++.+.++  ++++....++......  ... .-++. +...      
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~--~~~~~~i~~-~~~~------   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP--LLAGVVATT-DPEE------   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc--ccCCcEEec-ChHH------
Confidence            799999999999999999998884       699999965  4455555555432100  000 00110 1111      


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                        .+ ..-|++|.+||.....   ..+   -.+.+..|..-.-.+.+.+.++-  .+.+.|+++|
T Consensus        76 --~~-~daDvVVitAG~~~k~---g~t---R~dll~~Na~i~~~i~~~i~~~~--~~~~iiivvs  129 (323)
T TIGR01759        76 --AF-KDVDAALLVGAFPRKP---GME---RADLLSKNGKIFKEQGKALNKVA--KKDVKVLVVG  129 (323)
T ss_pred             --Hh-CCCCEEEEeCCCCCCC---CCc---HHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEEeC
Confidence              12 5689999999974321   123   23456667665555555554431  1256666665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.84  E-value=0.11  Score=50.20  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|.|+ |++|..+++.....|++ |+.++++.++.+.+ +++   |... +  .|..+++..+.+. +....  ..+|
T Consensus       179 ~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~~-~--i~~~~~~~~~~i~-~~~~~--~g~d  247 (358)
T TIGR03451       179 SVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GATH-T--VNSSGTDPVEAIR-ALTGG--FGAD  247 (358)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCce-E--EcCCCcCHHHHHH-HHhCC--CCCC
Confidence            9999985 99999999988889995 98999988776554 333   3322 1  2444433333322 22211  2599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.+.|
T Consensus       248 ~vid~~g  254 (358)
T TIGR03451       248 VVIDAVG  254 (358)
T ss_pred             EEEECCC
Confidence            9999988

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.83  E-value=0.048  Score=51.11  Aligned_cols=77  Identities=10%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|.++++.+...|++|+.++++.++.+.+ .++   +... ++  |....+....+. .....  ..+|
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~--~~~~~~~~~~~~-~~~~~--~~~d  215 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAAH-VI--VTDEEDLVAEVL-RITGG--KGVD  215 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE-EE--ecCCccHHHHHH-HHhCC--CCce
Confidence            3999999999999999999999999999999988766554 322   3221 22  322222222222 22211  3599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+++++|
T Consensus       216 ~vi~~~~  222 (328)
T cd08268         216 VVFDPVG  222 (328)
T ss_pred             EEEECCc
Confidence            9999988

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.78  E-value=0.13  Score=49.95  Aligned_cols=74  Identities=18%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|+|+ |+||..++..+...|+ +|+++++++++.+.+ +++   |....   .|..+++..+++ .+.   .++.+|
T Consensus       194 ~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~---i~~~~~~~~~~i-~~~---~~~g~d  261 (371)
T cd08281         194 SVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATAT---VNAGDPNAVEQV-REL---TGGGVD  261 (371)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCceE---eCCCchhHHHHH-HHH---hCCCCC
Confidence            9999985 8999999888888999 699999988876544 333   33221   244443322322 222   224699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.+.|
T Consensus       262 ~vid~~G  268 (371)
T cd08281         262 YAFEMAG  268 (371)
T ss_pred             EEEECCC
Confidence            9999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.77  E-value=0.19  Score=49.10  Aligned_cols=71  Identities=17%  Similarity=0.317  Sum_probs=47.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+ |++|..+++.....|++|++++++.++..+.++++   |....   .|..+.+.+.       +.. +.+|+
T Consensus       181 ~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~~---i~~~~~~~v~-------~~~-~~~D~  245 (375)
T PLN02178        181 RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADSF---LVTTDSQKMK-------EAV-GTMDF  245 (375)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcEE---EcCcCHHHHH-------Hhh-CCCcE
Confidence            8999886 89999999988899999999888765533333333   43222   2333332222       222 46899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       246 vid~~G  251 (375)
T PLN02178        246 IIDTVS  251 (375)
T ss_pred             EEECCC
Confidence            999987

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.76  E-value=0.095  Score=48.12  Aligned_cols=78  Identities=13%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEc
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSVC   66 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~~   66 (367)
                      ++ +|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .|.+.+.+.+.+.+.  ++..+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            44 8999998 9999999999999997 788887642                   344445555554333  4444444


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           67 DLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        67 Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      .++ ++.+.+++        ...|++|.+..
T Consensus       110 ~i~-~~~~~~~~--------~~~DiVi~~~D  131 (245)
T PRK05690        110 RLD-DDELAALI--------AGHDLVLDCTD  131 (245)
T ss_pred             cCC-HHHHHHHH--------hcCCEEEecCC
Confidence            444 23333333        45788887764

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.73  E-value=0.048  Score=54.11  Aligned_cols=71  Identities=14%  Similarity=0.252  Sum_probs=51.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ |.+|..+++.|...| .+|++++|+.+++++..+.+   +..  .+.     .++..+.+        
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~--~i~-----~~~l~~~l--------  238 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGE--AVK-----FEDLEEYL--------  238 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCe--Eee-----HHHHHHHH--------
Confidence            455 8999997 999999999999999 68999999998877766654   221  121     12333333        


Q ss_pred             CCccEEEEcCCC
Q 035642           87 GKLNLLVNNAAV   98 (367)
Q Consensus        87 g~iD~lI~~Ag~   98 (367)
                      ...|++|.+.+.
T Consensus       239 ~~aDvVi~aT~s  250 (417)
T TIGR01035       239 AEADIVISSTGA  250 (417)
T ss_pred             hhCCEEEECCCC
Confidence            357999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.69  E-value=0.14  Score=51.06  Aligned_cols=113  Identities=16%  Similarity=0.074  Sum_probs=72.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-------CC--EEEEEeCChhHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-------GA--IIHTCSRNQTELNERLQEWKLKG----LKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-------G~--~Vi~~~R~~~~~~~~~~~l~~~~----~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +|.|+|++|.+|.+++-.|+..       |.  +++++++++++++...-++....    .++. +..  .+.+   +  
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye---~--  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYE---V--  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHH---H--
Confidence            8999999999999999999988       65  79999999999888777776432    1111 111  1211   1  


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                            + ...|++|.+||.... +  ..+.   .+.++.|..-.-.+.+.+.++  ....+.||++|-
T Consensus       174 ------~-kdaDiVVitAG~prk-p--G~tR---~dLl~~N~~I~k~i~~~I~~~--a~p~~ivIVVsN  227 (444)
T PLN00112        174 ------F-QDAEWALLIGAKPRG-P--GMER---ADLLDINGQIFAEQGKALNEV--ASRNVKVIVVGN  227 (444)
T ss_pred             ------h-CcCCEEEECCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEcCC
Confidence                  2 568999999997432 1  1232   345666655444444444332  134567777664

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.68  E-value=0.091  Score=50.23  Aligned_cols=113  Identities=13%  Similarity=0.106  Sum_probs=66.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|+|| |.+|..++..++..| +.|++.+++++.++...-++...    +.... +.+ -+|   .+ .+        
T Consensus         7 KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l--------   71 (319)
T PTZ00117          7 KISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI--------   71 (319)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh--------
Confidence            8999997 899999999999999 68999999987654333333221    11111 111 112   22 11        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~  149 (367)
                      ..-|++|.++|.....   ..+.   .+.+..|..    +.+.+.+.+.+. ..+.++++|-..
T Consensus        72 ~~ADiVVitag~~~~~---g~~r---~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 KDSDVVVITAGVQRKE---EMTR---EDLLTINGK----IMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             CCCCEEEECCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecChH
Confidence            4579999999975332   1222   345556663    344444444433 345577776543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.68  E-value=0.1  Score=45.27  Aligned_cols=32  Identities=25%  Similarity=0.280  Sum_probs=28.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ   44 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~   44 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+.|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4788886 8999999999999998 699998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.67  E-value=0.14  Score=48.75  Aligned_cols=117  Identities=15%  Similarity=0.064  Sum_probs=70.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++.|+|++|.+|.++|-.|+..|.  .+++++.+  +++...-++...........+. .+ +++.+.       + ...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~y~~-------~-~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EELKKA-------L-KGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-CchHHh-------c-CCC
Confidence            588999999999999999998884  79999988  4433333443321111111110 00 111111       2 568


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      |++|.+||.....   ..+   -.+.++.|..-...+.+.+.++   ...+.|+++|-..
T Consensus        70 DivvitaG~~~k~---g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRKP---GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            9999999974321   122   2456677776666666666554   3357777777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.66  E-value=0.079  Score=50.41  Aligned_cols=117  Identities=15%  Similarity=0.053  Sum_probs=66.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|.|+||+|.+|.++|-.|+..|.  .++++++++  ++...-++...........+.  +.++..       +.+ ...
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~~~-------~~~-~da   68 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEGLE-------NAL-KGA   68 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCchH-------HHc-CCC
Confidence            478999999999999999998885  799999876  222222222211111111100  001111       122 568


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      |++|.+||.....   ..+   -.+.+..|+.-...+.+.+.++   ...+.|+++|-..
T Consensus        69 DivvitaG~~~~~---g~~---R~dll~~N~~I~~~i~~~i~~~---~p~~iiivvsNPv  119 (312)
T TIGR01772        69 DVVVIPAGVPRKP---GMT---RDDLFNVNAGIVKDLVAAVAES---CPKAMILVITNPV  119 (312)
T ss_pred             CEEEEeCCCCCCC---Ccc---HHHHHHHhHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence            9999999975322   112   2345677766444444444433   3356677776644

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.64  E-value=0.035  Score=45.52  Aligned_cols=84  Identities=13%  Similarity=0.147  Sum_probs=54.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHh----------cCCcEEEEEccCCCHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKL----------KGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~----------~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      ++-|.|+ |-.|.++++.|.+.|+.|..+ +|+.++.+.+...+..          ...++.++.  +.| +.+..++++
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~ia--vpD-daI~~va~~   87 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIA--VPD-DAIAEVAEQ   87 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE---S-C-CHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEE--ech-HHHHHHHHH
Confidence            7899998 899999999999999998876 5776666666554421          123444443  333 478888888


Q ss_pred             HHHH--cCCCccEEEEcCCCCC
Q 035642           81 VSSI--FQGKLNLLVNNAAVAV  100 (367)
Q Consensus        81 ~~~~--~~g~iD~lI~~Ag~~~  100 (367)
                      +...  + .+=.+|+|+.|-..
T Consensus        88 La~~~~~-~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAW-RPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S--TT-EEEES-SS--
T ss_pred             HHHhccC-CCCcEEEECCCCCh
Confidence            8765  2 23359999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN00203 glutamyl-tRNA reductase

Probab=95.62  E-value=0.071  Score=54.25  Aligned_cols=75  Identities=9%  Similarity=0.231  Sum_probs=53.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ |++|..+++.|...|+ +|+++.|+.++++.+.+.+.  +..+.+.  +   .++..+.+        
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~~--~---~~dl~~al--------  327 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIYK--P---LDEMLACA--------  327 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEee--c---HhhHHHHH--------
Confidence            445 8999999 9999999999999997 79999999999888777653  2222221  2   22333333        


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      ...|+||.+.+..
T Consensus       328 ~~aDVVIsAT~s~  340 (519)
T PLN00203        328 AEADVVFTSTSSE  340 (519)
T ss_pred             hcCCEEEEccCCC
Confidence            4579999887643

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.56  E-value=0.063  Score=51.10  Aligned_cols=72  Identities=15%  Similarity=0.259  Sum_probs=52.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++++++   +..  .+     +.++..+.+        
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l--------  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GGN--AV-----PLDELLELL--------  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CCe--EE-----eHHHHHHHH--------
Confidence            345 8999988 9999999999998774 7999999998888777765   221  11     223333332        


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      ...|++|.+.+..
T Consensus       237 ~~aDvVi~at~~~  249 (311)
T cd05213         237 NEADVVISATGAP  249 (311)
T ss_pred             hcCCEEEECCCCC
Confidence            3579999998843

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05442 malate dehydrogenase; Provisional

Probab=95.51  E-value=0.096  Score=50.16  Aligned_cols=112  Identities=13%  Similarity=0.100  Sum_probs=65.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQT--ELNERLQEWKLKG----LKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~~--~~~~~~~~l~~~~----~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +|.|+||+|.+|.++|-.|+..|.       .+++.+.++.  +++....++....    .++.     ++. +.     
T Consensus         6 KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~~-----   74 (326)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-DP-----   74 (326)
T ss_pred             EEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-Ch-----
Confidence            899999999999999999998774       6999998543  3444444443211    1111     110 11     


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISS  147 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS  147 (367)
                         .+.+ ..-|++|-+||.....   ..+   -.+.+..|..-.-.+.+.+.++   . ..+.++++|-
T Consensus        75 ---y~~~-~daDiVVitaG~~~k~---g~t---R~dll~~Na~i~~~i~~~i~~~---~~~~~iiivvsN  131 (326)
T PRK05442         75 ---NVAF-KDADVALLVGARPRGP---GME---RKDLLEANGAIFTAQGKALNEV---AARDVKVLVVGN  131 (326)
T ss_pred             ---HHHh-CCCCEEEEeCCCCCCC---CCc---HHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEeCC
Confidence               1112 5689999999974321   122   2345566655444444444332   3 3567777663

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.50  E-value=0.069  Score=50.45  Aligned_cols=74  Identities=19%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|++|++|.++++.....|++|+.+++++++.+.+ +++   +....   .|..+. . .+.+.+..   ++.+|+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~-~~~~~~~~---~~~~d~  216 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKEV---IPREEL-Q-EESIKPLE---KQRWAG  216 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCEE---EcchhH-H-HHHHHhhc---cCCcCE
Confidence            999999999999999999999999999999998776555 333   33221   232222 1 22222221   146899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++++.|
T Consensus       217 vld~~g  222 (326)
T cd08289         217 AVDPVG  222 (326)
T ss_pred             EEECCc
Confidence            998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.50  E-value=0.036  Score=56.01  Aligned_cols=46  Identities=22%  Similarity=0.244  Sum_probs=39.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++ +++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            3455 8999996 79999999999999999999999988877766554

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.50  E-value=0.077  Score=49.99  Aligned_cols=77  Identities=14%  Similarity=0.294  Sum_probs=52.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|+|+++++|.++++.+...|++|+.++++.++.+.+ +++   +... +  .|..+.+..+.+.+.. .  +.++|
T Consensus       144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~~~~-~--~~~~d  213 (324)
T cd08244         144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV-A--VDYTRPDWPDQVREAL-G--GGGVT  213 (324)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHHHHHc-C--CCCce
Confidence            3999999999999999999999999999999988776544 333   3322 1  2444433333332221 1  13599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.49  E-value=0.16  Score=48.09  Aligned_cols=113  Identities=14%  Similarity=0.068  Sum_probs=69.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           13 YFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLK---VTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~---~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +.|.|+ |++|.+++-.|+..|  ..++++++++++++....++......   .....+  .+   .. .+        .
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~---~~-~l--------~   65 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD---YA-DA--------A   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC---HH-Hh--------C
Confidence            357787 689999999999999  57999999998888777777643211   111111  11   11 11        5


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      .-|++|.+||.....   ..+.   .+.+..|+.-...+.+.+..+   ...+.|+++|-..
T Consensus        66 ~aDiVIitag~p~~~---~~~R---~~l~~~n~~i~~~~~~~i~~~---~p~~~viv~sNP~  118 (300)
T cd00300          66 DADIVVITAGAPRKP---GETR---LDLINRNAPILRSVITNLKKY---GPDAIILVVSNPV  118 (300)
T ss_pred             CCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccChH
Confidence            689999999974321   1222   244445554444444444332   2457777777533

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.48  E-value=0.12  Score=50.21  Aligned_cols=76  Identities=12%  Similarity=0.175  Sum_probs=51.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~   88 (367)
                      .+++|+|+ |+||..++..+...|+ +|+.++++.++.+.+ +++   |....   .|..+ .+++.+.+.++..   +.
T Consensus       187 ~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~---~g  255 (368)
T TIGR02818       187 DTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATDC---VNPNDYDKPIQEVIVEITD---GG  255 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCeE---EcccccchhHHHHHHHHhC---CC
Confidence            39999985 9999999998888999 799999998876655 333   43221   24332 2233333333321   46


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|+++.++|
T Consensus       256 ~d~vid~~G  264 (368)
T TIGR02818       256 VDYSFECIG  264 (368)
T ss_pred             CCEEEECCC
Confidence            999999988

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.45  E-value=0.087  Score=42.96  Aligned_cols=76  Identities=21%  Similarity=0.274  Sum_probs=54.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCCEEEE-EeCCh----------------------hHHHHHHHHHHhcCCcEEEEEcc
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGAIIHT-CSRNQ----------------------TELNERLQEWKLKGLKVTGSVCD   67 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~~Vi~-~~R~~----------------------~~~~~~~~~l~~~~~~~~~~~~D   67 (367)
                      +|+|.|++|-+|+.+++.+.+ .|..++. ++|+.                      +.++++.+.     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999998 7787554 56665                      223333222     12   4459


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 035642           68 LSSREQREKLMETVSSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        68 lsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~   98 (367)
                      +|.++.+.+.++.+.+.   ++.+|+-+.|.
T Consensus        74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence            99999999999888775   58899988885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.45  E-value=0.45  Score=45.19  Aligned_cols=112  Identities=13%  Similarity=0.177  Sum_probs=68.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG-----LKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~-----~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|.|.|+ |.+|..+|..|+..|.  .+++++.++++++....++....     .++.....   +.       +.+   
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y-------~~~---   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DY-------DDC---   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CH-------HHh---
Confidence            3678898 9999999999998885  69999999888777777776421     13333322   21       111   


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS  147 (367)
                        ..-|++|-+||.....   ..+.+ -.+.+..|..    +.+.+.+.+.+.. .+.++++|-
T Consensus        67 --~~aDivvitaG~~~kp---g~tr~-R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 --ADADIIVITAGPSIDP---GNTDD-RLDLAQTNAK----IIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             --CCCCEEEECCCCCCCC---CCCch-HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence              5689999999974321   12311 1344555554    4444455444443 455555543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.45  E-value=0.07  Score=50.32  Aligned_cols=76  Identities=8%  Similarity=0.073  Sum_probs=51.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.||++++|.++++.....|++|+.+.++.++.+.+.+ +   +.+. ++  +-.+.+ ..+.+.+....  .++|+
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~-~~--~~~~~~-~~~~i~~~~~~--~~~d~  211 (324)
T cd08292         142 WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGP-VV--STEQPG-WQDKVREAAGG--APISV  211 (324)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCE-EE--cCCCch-HHHHHHHHhCC--CCCcE
Confidence            99999999999999999999999999999888877655533 2   3322 11  323322 22223232221  25999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       212 v~d~~g  217 (324)
T cd08292         212 ALDSVG  217 (324)
T ss_pred             EEECCC
Confidence            999888

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.45  E-value=0.16  Score=41.93  Aligned_cols=76  Identities=16%  Similarity=0.308  Sum_probs=55.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhc--CCcEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLK--GLKVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~--~~~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.  ..++..+..++ 
T Consensus         4 ~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-   81 (135)
T PF00899_consen    4 RVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-   81 (135)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-
T ss_pred             EEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-
Confidence            7888887 8999999999999998 78888764                   23455666666543  45677777777 


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +.+...+++        ...|++|.+..
T Consensus        82 ~~~~~~~~~--------~~~d~vi~~~d  101 (135)
T PF00899_consen   82 DEENIEELL--------KDYDIVIDCVD  101 (135)
T ss_dssp             SHHHHHHHH--------HTSSEEEEESS
T ss_pred             ccccccccc--------cCCCEEEEecC
Confidence            344555555        24789988765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.44  E-value=0.21  Score=46.53  Aligned_cols=73  Identities=8%  Similarity=0.122  Sum_probs=46.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|.|+ |+||..+++.+...|++ |+++++++++.+.+ +++   +....   .|..+.   .+.+.+...  +..+|
T Consensus       123 ~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~---i~~~~~---~~~~~~~~~--~~g~d  189 (280)
T TIGR03366       123 RVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSF---GATAL---AEPEVL---AERQGGLQN--GRGVD  189 (280)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCcEe---cCchhh---HHHHHHHhC--CCCCC
Confidence            8999986 89999999988889996 88888887765433 333   33221   132221   222222211  13599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.+.|
T Consensus       190 ~vid~~G  196 (280)
T TIGR03366       190 VALEFSG  196 (280)
T ss_pred             EEEECCC
Confidence            9999988

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.43  E-value=0.13  Score=46.56  Aligned_cols=76  Identities=17%  Similarity=0.288  Sum_probs=51.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKGL--KVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~~--~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|.+.+.+.+++.+.  ++..+..+++
T Consensus        23 ~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~  101 (228)
T cd00757          23 RVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERLD  101 (228)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecceeC
Confidence            8999885 8999999999999998 67777543                   2455556666655443  4555554553


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                       .+.+.+++        ...|++|.+..
T Consensus       102 -~~~~~~~~--------~~~DvVi~~~d  120 (228)
T cd00757         102 -AENAEELI--------AGYDLVLDCTD  120 (228)
T ss_pred             -HHHHHHHH--------hCCCEEEEcCC
Confidence             33444443        45799888876

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.39  E-value=0.27  Score=46.87  Aligned_cols=113  Identities=11%  Similarity=0.057  Sum_probs=71.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|+ |.+|.++|..|+..|.  .+++++.++++++....++....   ........  .|.+   . +        
T Consensus         5 Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~---~-~--------   69 (312)
T cd05293           5 KVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS---V-T--------   69 (312)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH---H-h--------
Confidence            7999996 9999999999998885  69999999887777777665432   11111111  1221   1 1        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.++++|-.
T Consensus        70 ~~adivvitaG~~~k~---g~~R---~dll~~N~~i~~~~~~~i~~~---~p~~~vivvsNP  122 (312)
T cd05293          70 ANSKVVIVTAGARQNE---GESR---LDLVQRNVDIFKGIIPKLVKY---SPNAILLVVSNP  122 (312)
T ss_pred             CCCCEEEECCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEccCh
Confidence            4689999999975331   2233   334555655444444444433   335777777753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.38  E-value=0.08  Score=53.08  Aligned_cols=79  Identities=20%  Similarity=0.168  Sum_probs=53.9

Q ss_pred             CCCC-eEEEEcCC----------------ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC
Q 035642            8 SNEQ-NYFITGGT----------------RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS   70 (367)
Q Consensus         8 ~~~~-~vLVTGas----------------~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd   70 (367)
                      +++| +||||+|.                |-.|.++|+++..+|++|.++.-...        +. ....+..+.  +. 
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~-~p~~v~~i~--V~-  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA-DPQGVKVIH--VE-  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC-CCCCceEEE--ec-
Confidence            3677 99999875                77999999999999999998864321        00 122343333  33 


Q ss_pred             HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q 035642           71 REQREKLMETVSSIFQGKLNLLVNNAAVAVPK  102 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~  102 (367)
                        +.+++.+.+.+.+  +.|++|++|++..+.
T Consensus       321 --ta~eM~~av~~~~--~~Di~I~aAAVaDyr  348 (475)
T PRK13982        321 --SARQMLAAVEAAL--PADIAIFAAAVADWR  348 (475)
T ss_pred             --CHHHHHHHHHhhC--CCCEEEEecccccee
Confidence              4455555555555  379999999997554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.37  E-value=0.15  Score=46.66  Aligned_cols=34  Identities=24%  Similarity=0.260  Sum_probs=28.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +++ +|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            345 7888877 7999999999999997 78888775

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.37  E-value=0.054  Score=47.24  Aligned_cols=43  Identities=16%  Similarity=0.233  Sum_probs=35.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK   55 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~   55 (367)
                      +|.|.|| |.+|+.+|..++..|++|.+.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4778888 999999999999999999999999988877666654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.32  E-value=0.22  Score=40.26  Aligned_cols=66  Identities=18%  Similarity=0.376  Sum_probs=45.4

Q ss_pred             hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-CccEEEEcCC
Q 035642           21 GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KLNLLVNNAA   97 (367)
Q Consensus        21 GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~iD~lI~~Ag   97 (367)
                      |||...+..+...|++|+++++++++.+.+. ++   |....   .|-++.+    +.+++.+..++ ++|++|.++|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~---Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL---GADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT---TESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh---ccccc---ccccccc----cccccccccccccceEEEEecC
Confidence            6899999999999999999999988765543 32   42222   3444444    33333333323 6999999999

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.30  E-value=0.13  Score=49.95  Aligned_cols=75  Identities=12%  Similarity=0.210  Sum_probs=52.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|.|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++   +....   .|..+. +++.+.+.++..   +++
T Consensus       189 ~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~~---~g~  257 (368)
T cd08300         189 TVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMTD---GGV  257 (368)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHhC---CCC
Confidence            9999975 9999999999999999 699999998877644 333   43322   244332 234444444322   469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.+.|
T Consensus       258 d~vid~~g  265 (368)
T cd08300         258 DYTFECIG  265 (368)
T ss_pred             cEEEECCC
Confidence            99999888

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.30  E-value=0.24  Score=47.76  Aligned_cols=70  Identities=16%  Similarity=0.246  Sum_probs=46.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN---QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~---~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +|+|+|+ |++|...++.+...|++|++++|+   +++.+ .++++   |...    +|..+. .+.+ .    ... +.
T Consensus       175 ~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~~----v~~~~~-~~~~-~----~~~-~~  238 (355)
T cd08230         175 RALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GATY----VNSSKT-PVAE-V----KLV-GE  238 (355)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCEE----ecCCcc-chhh-h----hhc-CC
Confidence            8999986 999999998888899999999984   44443 33333   4432    233332 2222 1    112 56


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|++|.++|
T Consensus       239 ~d~vid~~g  247 (355)
T cd08230         239 FDLIIEATG  247 (355)
T ss_pred             CCEEEECcC
Confidence            999999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.27  E-value=0.096  Score=50.03  Aligned_cols=74  Identities=12%  Similarity=0.225  Sum_probs=50.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|+ |++|..+++.+...|++ |+++++++++.+.+ +++   +...   ..|..+.+ .+++.+ ...  +.++|
T Consensus       166 ~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~~--~~~~d  233 (339)
T cd08239         166 TVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LTS--GAGAD  233 (339)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-HhC--CCCCC
Confidence            9999986 89999999999899998 99999988776544 333   3322   12444433 333322 211  12699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.+.|
T Consensus       234 ~vid~~g  240 (339)
T cd08239         234 VAIECSG  240 (339)
T ss_pred             EEEECCC
Confidence            9999988

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.26  E-value=0.16  Score=45.49  Aligned_cols=31  Identities=26%  Similarity=0.335  Sum_probs=28.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        30 ~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         30 KVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            8999986 8999999999999998 59998887

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.25  E-value=0.1  Score=49.41  Aligned_cols=76  Identities=8%  Similarity=0.127  Sum_probs=50.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.|+++++|.++++.....|++|+.++++.++.+.+ +.+   +.+. +  .|..+. +..+.+.+..   ++.+|
T Consensus       141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v--~~~~~~-~~~~~~~~~~---~~~vd  209 (329)
T cd08250         141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR-P--INYKTE-DLGEVLKKEY---PKGVD  209 (329)
T ss_pred             CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce-E--EeCCCc-cHHHHHHHhc---CCCCe
Confidence            3999999999999999998889999999999887766544 333   3222 1  232222 2223332222   14599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++++.|
T Consensus       210 ~v~~~~g  216 (329)
T cd08250         210 VVYESVG  216 (329)
T ss_pred             EEEECCc
Confidence            9999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.24  E-value=0.081  Score=57.87  Aligned_cols=74  Identities=16%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CE-------------EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AI-------------IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~-------------Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      +|+|.|| |.||+..++.|++.. +.             |.+++++.+.++++.+.+.    ++..+.+|++|.+++.++
T Consensus       571 rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        571 NVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             cEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHHHHh
Confidence            8999997 999999999998753 33             8889999888877766542    456788999999888877


Q ss_pred             HHHHHHHcCCCccEEEEcCCC
Q 035642           78 METVSSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag~   98 (367)
                      +        .++|+||++...
T Consensus       646 v--------~~~DaVIsalP~  658 (1042)
T PLN02819        646 V--------SQVDVVISLLPA  658 (1042)
T ss_pred             h--------cCCCEEEECCCc
Confidence            6        358999999875

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.23  E-value=0.15  Score=49.45  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=54.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEE
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSV   65 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~   65 (367)
                      +++ +|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .|.+.+++.+++.+.  ++..+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            345 8999988 8999999999999998 788888753                   455666666665443  444444


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           66 CDLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        66 ~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      .+++. +...+++        ...|+||.+..
T Consensus       105 ~~i~~-~~~~~~~--------~~~DvVvd~~d  127 (355)
T PRK05597        105 RRLTW-SNALDEL--------RDADVILDGSD  127 (355)
T ss_pred             eecCH-HHHHHHH--------hCCCEEEECCC
Confidence            45553 3333333        35788888775

>PRK08223 hypothetical protein; Validated

Probab=95.23  E-value=0.11  Score=48.70  Aligned_cols=33  Identities=21%  Similarity=0.262  Sum_probs=28.7

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      ++ +|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            44 8999887 7999999999999998 78888775

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.18  E-value=0.099  Score=48.77  Aligned_cols=77  Identities=16%  Similarity=0.274  Sum_probs=50.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|+|+++++|.+++..+...|+.|+.++++.++.+.+. .+   +... .+  +..+.+..+.+. .....  ..+|
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~-~~--~~~~~~~~~~i~-~~~~~--~~~d  210 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-AL---GADH-VI--DYRDPDLRERVK-ALTGG--RGVD  210 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-Hc---CCce-ee--ecCCccHHHHHH-HHcCC--CCcE
Confidence            39999999999999999999999999999999877655442 22   3222 11  222222222222 22111  3599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++++.|
T Consensus       211 ~v~~~~g  217 (323)
T cd08241         211 VVYDPVG  217 (323)
T ss_pred             EEEECcc
Confidence            9999887

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.18  E-value=0.091  Score=49.46  Aligned_cols=76  Identities=11%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+++++|.++++.+...|++|+.++++.++.+.+ +++   +.+..   .|..+.+...+ +.+...  +.++|.
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~-~~~~~~--~~~~d~  210 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADEV---IDSSPEDLAQR-VKEATG--GAGARL  210 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCEE---ecccchhHHHH-HHHHhc--CCCceE
Confidence            999999999999999999999999999999888765544 333   32211   13333222222 222221  136999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++++.|
T Consensus       211 vl~~~g  216 (323)
T cd05282         211 ALDAVG  216 (323)
T ss_pred             EEECCC
Confidence            999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.12  E-value=0.13  Score=48.09  Aligned_cols=74  Identities=18%  Similarity=0.310  Sum_probs=50.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.|+++++|.++++.....|++|+.++++.++.+.+ .++   +.+..+ . +  +. ++.+.+.+.    +.++|
T Consensus       144 ~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~~-~-~--~~-~~~~~i~~~----~~~~d  210 (320)
T cd08243         144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADEVV-I-D--DG-AIAEQLRAA----PGGFD  210 (320)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcEEE-e-c--Cc-cHHHHHHHh----CCCce
Confidence            3999999999999999999999999999999988765444 333   332221 1 2  21 222222222    25799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++++.|
T Consensus       211 ~vl~~~~  217 (320)
T cd08243         211 KVLELVG  217 (320)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.11  E-value=0.099  Score=48.62  Aligned_cols=77  Identities=8%  Similarity=0.199  Sum_probs=50.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++|.|+++++|.++++.+...|+.|+.++++.++.+.+ .++   +.... +  +..+.+....+. ....  +..+|
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~-~--~~~~~~~~~~~~-~~~~--~~~~d  207 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA---GADHV-I--NYRDEDFVERVR-EITG--GRGVD  207 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC---CCCEE-E--eCCchhHHHHHH-HHcC--CCCee
Confidence            3999999999999999999999999999999888776554 332   33222 1  222222222222 2211  13599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++++.|
T Consensus       208 ~vl~~~~  214 (320)
T cd05286         208 VVYDGVG  214 (320)
T ss_pred             EEEECCC
Confidence            9999877

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.11  E-value=0.23  Score=48.56  Aligned_cols=113  Identities=17%  Similarity=0.071  Sum_probs=69.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-E----EEE----EeCChhHHHHHHHHHHhcC-C---cEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-I----IHT----CSRNQTELNERLQEWKLKG-L---KVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~----Vi~----~~R~~~~~~~~~~~l~~~~-~---~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +|.|+||+|.+|.++|-.|+..|. .    |.+    +++++++++...-++.... .   ++. +..  .+   ..+  
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~---y~~--  117 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DP---YEV--  117 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CC---HHH--
Confidence            899999999999999999998874 3    444    4888888877777665421 1   111 111  11   111  


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                            + ...|++|.+||.....   ..+   -.+.+..|..-.-.+.+.+.++  .+..+.|+++|-
T Consensus       118 ------~-kdaDIVVitAG~prkp---g~t---R~dll~~N~~I~k~i~~~I~~~--a~~~~iviVVsN  171 (387)
T TIGR01757       118 ------F-EDADWALLIGAKPRGP---GME---RADLLDINGQIFADQGKALNAV--ASKNCKVLVVGN  171 (387)
T ss_pred             ------h-CCCCEEEECCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEcCC
Confidence                  2 5689999999974321   123   2345666655555555444443  124566777664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.10  E-value=0.13  Score=51.45  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+.    +..+.++.+|.++++.+.++--       .+.|
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~~-------~~a~  299 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEGI-------DEAD  299 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcCC-------ccCC
Confidence            38999999 9999999999999999999999998876665543    2345678889999887765421       4577


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .+|.+.+
T Consensus       300 ~vi~~~~  306 (453)
T PRK09496        300 AFIALTN  306 (453)
T ss_pred             EEEECCC
Confidence            8776544

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.09  E-value=0.51  Score=44.87  Aligned_cols=111  Identities=13%  Similarity=0.055  Sum_probs=67.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|+ |.+|..++..|+.+|  ..|+++++++++++....++....   .......   .+.+       .    + 
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l-   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----C-   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----h-
Confidence            4788898 899999999999999  589999999887765444454321   1111111   1211       1    1 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ...|++|.++|.....   ..+   ..+.+..|..-.-.+.+.+..+   ...|.|++++.
T Consensus        66 ~~aDiViita~~~~~~---~~~---r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~tN  117 (308)
T cd05292          66 KGADVVVITAGANQKP---GET---RLDLLKRNVAIFKEIIPQILKY---APDAILLVVTN  117 (308)
T ss_pred             CCCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            5689999999975321   112   2344555555444444444432   23577777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.07  E-value=1.2  Score=42.56  Aligned_cols=118  Identities=10%  Similarity=0.042  Sum_probs=67.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|| |.+|..++..++..|. .|++.+++++.++...-++...    +....+...  +|.   ++ +        
T Consensus         8 KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~---~~-l--------   72 (321)
T PTZ00082          8 KISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNY---ED-I--------   72 (321)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCH---HH-h--------
Confidence            8999995 8899999999999995 8999999987653222222211    112222211  222   11 1        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~  149 (367)
                      ...|++|.+||......-.+.+.+. .+.+..|+.    +.+.+.+.+.+. ..+.++++|-..
T Consensus        73 ~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence            4689999999985432211111111 334455543    444444444433 345677766543

>PLN02740 Alcohol dehydrogenase-like

Probab=95.05  E-value=0.14  Score=49.92  Aligned_cols=75  Identities=17%  Similarity=0.180  Sum_probs=51.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +|+|.|+ |+||..+++.+...|+ +|+.++++.++.+.+. ++   |... +  .|..+. +.+.+.+.++.   ++.+
T Consensus       201 ~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~-~--i~~~~~~~~~~~~v~~~~---~~g~  269 (381)
T PLN02740        201 SVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITD-F--INPKDSDKPVHERIREMT---GGGV  269 (381)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcE-E--EecccccchHHHHHHHHh---CCCC
Confidence            9999986 9999999998889999 6999999988766553 33   4322 2  243332 12333333332   1369


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.++|
T Consensus       270 dvvid~~G  277 (381)
T PLN02740        270 DYSFECAG  277 (381)
T ss_pred             CEEEECCC
Confidence            99999998

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.02  E-value=0.086  Score=52.66  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=35.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      ++.|.||+|++|.++++.|.+.|++|.+++|+.+...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            58999999999999999999999999999999876544433

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.01  E-value=0.15  Score=48.36  Aligned_cols=31  Identities=26%  Similarity=0.446  Sum_probs=27.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            4788887 8999999999999998 68888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.00  E-value=0.14  Score=50.69  Aligned_cols=82  Identities=10%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++|.||+|++|..+++.+...|+   +|+.++++.++.+.+.+.+...    |....  ..|..+.+++.+.+.++...
T Consensus       178 ~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~--~i~~~~~~~~~~~v~~~t~g  255 (410)
T cd08238         178 NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL--YVNPATIDDLHATLMELTGG  255 (410)
T ss_pred             EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE--EECCCccccHHHHHHHHhCC
Confidence            999999999999998887766654   7999999998877654432111    21111  22433323333333333221


Q ss_pred             cCCCccEEEEcCC
Q 035642           85 FQGKLNLLVNNAA   97 (367)
Q Consensus        85 ~~g~iD~lI~~Ag   97 (367)
                        ..+|.+|.+.|
T Consensus       256 --~g~D~vid~~g  266 (410)
T cd08238         256 --QGFDDVFVFVP  266 (410)
T ss_pred             --CCCCEEEEcCC
Confidence              35899999877

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.96  E-value=0.15  Score=48.70  Aligned_cols=77  Identities=21%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.|+++++|.++++.+.+.|++|+.+.+++++.+.+ +.+   +.+..   .+..+.+..+++.+.. .  ++.+|
T Consensus       167 ~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~~~~~~-~--~~~vd  236 (341)
T cd08297         167 DWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEAVKELT-G--GGGAH  236 (341)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHHHHHHh-c--CCCCC
Confidence            3999999999999999999999999999999998776544 333   32221   2333333333332221 1  14699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.+
T Consensus       237 ~vl~~~~  243 (341)
T cd08297         237 AVVVTAV  243 (341)
T ss_pred             EEEEcCC
Confidence            9998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.92  E-value=0.16  Score=48.18  Aligned_cols=76  Identities=12%  Similarity=0.135  Sum_probs=48.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++++||+|++|..+++.....|++|+.++++.++.+.+.+ +   +.+.. +  |..+.+..+++ .+....  .++|+
T Consensus       146 vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~---g~~~~-i--~~~~~~~~~~v-~~~~~~--~~~d~  215 (324)
T cd08291         146 AVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I---GAEYV-L--NSSDPDFLEDL-KELIAK--LNATI  215 (324)
T ss_pred             EEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCcEE-E--ECCCccHHHHH-HHHhCC--CCCcE
Confidence            44556999999999988888889999999999877655433 2   43322 2  33333222222 222211  36999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++++.|
T Consensus       216 vid~~g  221 (324)
T cd08291         216 FFDAVG  221 (324)
T ss_pred             EEECCC
Confidence            999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02602 lactate dehydrogenase

Probab=94.91  E-value=0.22  Score=48.17  Aligned_cols=112  Identities=12%  Similarity=0.106  Sum_probs=70.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~---~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|+ |.+|.++|-.|+..|.  .+++++.++++++..+.++.....   .. -+.. -.+.+   . +        
T Consensus        39 KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~---~-~--------  103 (350)
T PLN02602         39 KVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYA---V-T--------  103 (350)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHH---H-h--------
Confidence            8999996 9999999999998885  699999998887777766654311   11 1111 01211   1 1        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..-|++|-+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus       104 ~daDiVVitAG~~~k~---g~tR---~dll~~N~~I~~~i~~~I~~~---~p~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQIP---GESR---LNLLQRNVALFRKIIPELAKY---SPDTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCCc---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            5689999999975322   1232   244555554444444444332   33567777764

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.90  E-value=0.21  Score=47.19  Aligned_cols=78  Identities=14%  Similarity=0.225  Sum_probs=51.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|+|+++++|.++++.+...|+.|+.+.++.++.+.+. .+   +....   .|..+.+...+.+.+....  ..+|
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  212 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KL---AAIIL---IRYPDEEGFAPKVKKLTGE--KGVN  212 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCcEE---EecCChhHHHHHHHHHhCC--CCce
Confidence            39999999999999999999999999888888887665552 22   33221   2333322122222222211  3599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++++.|
T Consensus       213 ~~i~~~~  219 (334)
T PTZ00354        213 LVLDCVG  219 (334)
T ss_pred             EEEECCc
Confidence            9999876

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.89  E-value=0.15  Score=50.20  Aligned_cols=71  Identities=13%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ ++||.|| |-+|.-+|++|+++|. .|+++.|+.++++++++++.   +       +....+++....        
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~---~-------~~~~l~el~~~l--------  236 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG---A-------EAVALEELLEAL--------  236 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC---C-------eeecHHHHHHhh--------
Confidence            566 8999998 6799999999999995 79999999999999998874   1       222223333333        


Q ss_pred             CCccEEEEcCCC
Q 035642           87 GKLNLLVNNAAV   98 (367)
Q Consensus        87 g~iD~lI~~Ag~   98 (367)
                      ...|+||.+.|-
T Consensus       237 ~~~DvVissTsa  248 (414)
T COG0373         237 AEADVVISSTSA  248 (414)
T ss_pred             hhCCEEEEecCC
Confidence            457888887764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.89  E-value=0.079  Score=45.72  Aligned_cols=38  Identities=13%  Similarity=0.265  Sum_probs=33.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      ++.+ +++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            4666 9999999777899999999999999999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK04148 hypothetical protein; Provisional

Probab=94.89  E-value=0.074  Score=43.95  Aligned_cols=53  Identities=13%  Similarity=0.060  Sum_probs=41.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE   72 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~   72 (367)
                      ++++.|.+  -|.++|..|.+.|++|++++.++...+.+.+.      .+.++..|+.+++
T Consensus        19 kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         19 KIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             EEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            79999986  77888999999999999999999865554332      2567777887654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.88  E-value=0.26  Score=41.04  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=48.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~~Dls   69 (367)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+.  ++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 8999999999999998 688887641                   344445555554333  3444444444


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +.. ..+.       + .+.|++|.+..
T Consensus        80 ~~~-~~~~-------~-~~~diVi~~~d   98 (143)
T cd01483          80 EDN-LDDF-------L-DGVDLVIDAID   98 (143)
T ss_pred             hhh-HHHH-------h-cCCCEEEECCC
Confidence            322 1111       2 56788887765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.86  E-value=0.14  Score=48.55  Aligned_cols=113  Identities=14%  Similarity=0.121  Sum_probs=69.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~---~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |+||.++|-.|+.++.  .+++.++++++++....++.....   .-..+..| .+.   .+        + 
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y---~~--------~-   67 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY---ED--------L-   67 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh---hh--------h-
Confidence            5889999 9999999999988874  799999997776666555543211   00112222 111   11        1 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..-|+++-+||......   ++.   .+.+..|..-.-.+.+.+.++   ...+.|+.+|-
T Consensus        68 ~~aDiVvitAG~prKpG---mtR---~DLl~~Na~I~~~i~~~i~~~---~~d~ivlVvtN  119 (313)
T COG0039          68 KGADIVVITAGVPRKPG---MTR---LDLLEKNAKIVKDIAKAIAKY---APDAIVLVVTN  119 (313)
T ss_pred             cCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhh---CCCeEEEEecC
Confidence            46899999999754321   233   345667766655666655443   22455555554

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.83  E-value=0.21  Score=48.77  Aligned_cols=78  Identities=17%  Similarity=0.322  Sum_probs=52.4

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcC--CcEEEEEc
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKG--LKVTGSVC   66 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~--~~~~~~~~   66 (367)
                      .+ +|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..|.+.+.+.+.+.+  .++..+..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            44 8899887 7999999999999997 89998876                   234555555555433  34555554


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           67 DLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        67 Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      .++ ++.+.+++        ...|++|.+..
T Consensus       119 ~i~-~~~~~~~~--------~~~DlVid~~D  140 (370)
T PRK05600        119 RLT-AENAVELL--------NGVDLVLDGSD  140 (370)
T ss_pred             ecC-HHHHHHHH--------hCCCEEEECCC
Confidence            554 33344443        35788887765

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.82  E-value=0.27  Score=43.63  Aligned_cols=31  Identities=23%  Similarity=0.263  Sum_probs=28.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|..++..|++.|. +++++|++
T Consensus        23 ~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        23 TVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            8999998 8999999999999999 79999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.73  E-value=0.27  Score=41.99  Aligned_cols=84  Identities=10%  Similarity=0.083  Sum_probs=54.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-------hcCCcEEEEEccCCCHHHHHHHHHH--HH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-------LKGLKVTGSVCDLSSREQREKLMET--VS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~-------~~~~~~~~~~~Dlsd~~sv~~~~~~--~~   82 (367)
                      +|-+.|- |-+|..+|+.|+++|++|.+.+|+.++.+++.+.-.       +.-....++..=+.+.+++++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            5677776 899999999999999999999999988877654310       0001223344457788888888876  55


Q ss_pred             HHcCCCccEEEEcCC
Q 035642           83 SIFQGKLNLLVNNAA   97 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag   97 (367)
                      ... .+=+++|++..
T Consensus        82 ~~l-~~g~iiid~sT   95 (163)
T PF03446_consen   82 AGL-RPGKIIIDMST   95 (163)
T ss_dssp             GGS--TTEEEEE-SS
T ss_pred             hcc-ccceEEEecCC
Confidence            543 33345555444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.72  E-value=0.16  Score=48.45  Aligned_cols=81  Identities=16%  Similarity=0.191  Sum_probs=49.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR--EQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~--~sv~~~~~~~~~~~~g~   88 (367)
                      ++++|.|+++++|.++++.+...|++|+.+.++.+..++..+.+...+....+   +-.+.  .+....+...   .++.
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~i~~~---~~~~  221 (341)
T cd08290         148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL---TEEELRSLLATELLKSA---PGGR  221 (341)
T ss_pred             CEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEE---eCcccccccHHHHHHHH---cCCC
Confidence            39999999999999999999999999988887763212222222222433222   21211  0222222222   2136


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|.++.+.|
T Consensus       222 ~d~vld~~g  230 (341)
T cd08290         222 PKLALNCVG  230 (341)
T ss_pred             ceEEEECcC
Confidence            999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.67  E-value=0.26  Score=47.80  Aligned_cols=75  Identities=15%  Similarity=0.234  Sum_probs=50.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +|+|.|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++   |....   .|..+. +++.+.+.++..   +.+
T Consensus       190 ~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~---~~~  258 (369)
T cd08301         190 TVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVTEF---VNPKDHDKPVQEVIAEMTG---GGV  258 (369)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCceE---EcccccchhHHHHHHHHhC---CCC
Confidence            9999985 9999999998889999 799999998776644 333   43221   133321 234444443322   469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.+.|
T Consensus       259 d~vid~~G  266 (369)
T cd08301         259 DYSFECTG  266 (369)
T ss_pred             CEEEECCC
Confidence            99999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.63  E-value=0.098  Score=53.96  Aligned_cols=74  Identities=12%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++.++|.|+ |-+|++++++|.++|++|++++.|+++.++..+.      ....+.+|.+|++..+++--       .+.
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~------g~~~i~GD~~~~~~L~~a~i-------~~a  482 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRER------GIRAVLGNAANEEIMQLAHL-------DCA  482 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC------CCeEEEcCCCCHHHHHhcCc-------ccc
Confidence            457888887 7899999999999999999999999877665431      36678889999888776421       356


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.++-+.+
T Consensus       483 ~~viv~~~  490 (558)
T PRK10669        483 RWLLLTIP  490 (558)
T ss_pred             CEEEEEcC
Confidence            66655443

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.57  E-value=0.76  Score=44.41  Aligned_cols=71  Identities=18%  Similarity=0.222  Sum_probs=47.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.| +|++|..+++.+...|++|+.++++.++.+...+.+   |....   .|-.+.+.+.+       .. +.+|+
T Consensus       183 ~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~---Ga~~~---i~~~~~~~~~~-------~~-~~~D~  247 (357)
T PLN02514        183 RGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHL---GADDY---LVSSDAAEMQE-------AA-DSLDY  247 (357)
T ss_pred             eEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhc---CCcEE---ecCCChHHHHH-------hc-CCCcE
Confidence            899996 599999999888899999998888877665554443   43221   13233322221       12 45899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       248 vid~~g  253 (357)
T PLN02514        248 IIDTVP  253 (357)
T ss_pred             EEECCC
Confidence            999987

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.55  E-value=0.23  Score=49.61  Aligned_cols=74  Identities=14%  Similarity=0.111  Sum_probs=47.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|++ ++|.++|+.|+++|+.|.+.+.+....  ..+.+......+.+...... ..    ..        ...|.
T Consensus         7 ~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~--------~~~d~   70 (445)
T PRK04308          7 KILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD--------NGFDI   70 (445)
T ss_pred             EEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH--------hCCCE
Confidence            89999985 999999999999999999998765431  12223321112333332211 11    11        35799


Q ss_pred             EEEcCCCCCC
Q 035642           92 LVNNAAVAVP  101 (367)
Q Consensus        92 lI~~Ag~~~~  101 (367)
                      ||...|+...
T Consensus        71 vv~spgi~~~   80 (445)
T PRK04308         71 LALSPGISER   80 (445)
T ss_pred             EEECCCCCCC
Confidence            9999998643

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.54  E-value=0.64  Score=46.93  Aligned_cols=76  Identities=13%  Similarity=0.076  Sum_probs=50.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +|+|.|+ |++|.++|+.|.++|++|.+++++.. ......+.+.+.|..  ++..+-..      .       . 
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~--~~~~~~~~------~-------~-   76 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGAT--VRLGPGPT------L-------P-   76 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCE--EEECCCcc------c-------c-
Confidence            344 8999997 78999999999999999999986543 333444555554433  33222111      0       1 


Q ss_pred             CCccEEEEcCCCCCC
Q 035642           87 GKLNLLVNNAAVAVP  101 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~  101 (367)
                      ...|.+|...|+...
T Consensus        77 ~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         77 EDTDLVVTSPGWRPD   91 (480)
T ss_pred             CCCCEEEECCCcCCC
Confidence            358999999998643

>PRK08328 hypothetical protein; Provisional

Probab=94.52  E-value=0.34  Score=43.99  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=28.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ   44 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~   44 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        29 ~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         29 KVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            7888887 7999999999999998 788888654

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.44  E-value=0.24  Score=46.65  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=35.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      +++|.|++|++|.+++......|++|+.++++.++.+.+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         149 PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            899999999999999998889999999999998776554

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.43  E-value=0.2  Score=47.43  Aligned_cols=77  Identities=8%  Similarity=0.146  Sum_probs=50.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.||++.+|.++++.+...|++|+.++++.++.+.+ +++   +... ++  |..+.+ +.+.+.+....  ..+|
T Consensus       142 ~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~---g~~~-~~--~~~~~~-~~~~~~~~~~~--~~~d  211 (327)
T PRK10754        142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKA---GAWQ-VI--NYREEN-IVERVKEITGG--KKVR  211 (327)
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHC---CCCE-EE--cCCCCc-HHHHHHHHcCC--CCeE
Confidence            3999999999999999988889999999999887765544 332   3322 22  222222 22222222211  3599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus       212 ~vl~~~~  218 (327)
T PRK10754        212 VVYDSVG  218 (327)
T ss_pred             EEEECCc
Confidence            9998876

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.42  E-value=0.2  Score=42.64  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=30.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR   42 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R   42 (367)
                      +++++ +++|.|| |-+|...++.|++.|++|.+++.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            46777 8999987 78999999999999999988854

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.33  E-value=0.43  Score=44.60  Aligned_cols=103  Identities=7%  Similarity=0.161  Sum_probs=68.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      |++|.||+|..|+-+-+--.-.|+.|++.+-+.++..-+..++.   -+.   ..|--++..+.+++++.   ++..||+
T Consensus       156 Tv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~---afNYK~e~~~~~aL~r~---~P~GIDi  226 (343)
T KOG1196|consen  156 TVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDD---AFNYKEESDLSAALKRC---FPEGIDI  226 (343)
T ss_pred             EEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccC---Ccc---ceeccCccCHHHHHHHh---CCCcceE
Confidence            99999999999986554444679999999999988776666552   111   11334444555555553   3357999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV  151 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~  151 (367)
                      .+-|.|.-                          ++.+.+..|+.  .|||+..+-++.+
T Consensus       227 YfeNVGG~--------------------------~lDavl~nM~~--~gri~~CG~ISqY  258 (343)
T KOG1196|consen  227 YFENVGGK--------------------------MLDAVLLNMNL--HGRIAVCGMISQY  258 (343)
T ss_pred             EEeccCcH--------------------------HHHHHHHhhhh--ccceEeeeeehhc
Confidence            99999841                          23344455544  4889987765544

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.32  E-value=0.56  Score=41.69  Aligned_cols=73  Identities=19%  Similarity=0.120  Sum_probs=47.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHh-----------cCCcEEEEEccCCCHHHHHHHHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKL-----------KGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~-----------~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .+..||+|-||.+++++|++.|+.|++.+|+. ++.+...+.+..           ...++.++.+-   .+.+..+.++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            34567889999999999999999998885554 445444444421           12345554443   3456666666


Q ss_pred             HHHHcCCC
Q 035642           81 VSSIFQGK   88 (367)
Q Consensus        81 ~~~~~~g~   88 (367)
                      +.+.++++
T Consensus        80 l~~~~~~K   87 (211)
T COG2085          80 LRDALGGK   87 (211)
T ss_pred             HHHHhCCe
Confidence            66655334

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.31  E-value=0.3  Score=47.05  Aligned_cols=76  Identities=16%  Similarity=0.250  Sum_probs=48.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR--EQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~--~sv~~~~~~~~~~~~g~   88 (367)
                      ++||+| +|++|.++++.+...|+ +|+++++++++.+.+ +.+   +.... +  |..+.  ....+.+.+....  ..
T Consensus       180 ~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~v-i--~~~~~~~~~~~~~i~~~~~~--~~  249 (361)
T cd08231         180 TVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF---GADAT-I--DIDELPDPQRRAIVRDITGG--RG  249 (361)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCCeE-E--cCcccccHHHHHHHHHHhCC--CC
Confidence            899997 59999999998889999 999999888766543 333   33221 1  22221  1111222222211  36


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|+++++.|
T Consensus       250 ~d~vid~~g  258 (361)
T cd08231         250 ADVVIEASG  258 (361)
T ss_pred             CcEEEECCC
Confidence            999999987

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.25  E-value=0.41  Score=43.59  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=26.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            377887 58999999999999998 78888775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.25  E-value=0.24  Score=47.60  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=49.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|+ |++|..+++.+...|+ +|++++++.++.+.+ .++   +.+..   .|..+.+..+.+. +...  ++.+|
T Consensus       175 ~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~~~~l~-~~~~--~~~~d  243 (351)
T cd08233         175 TALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDVVAEVR-KLTG--GGGVD  243 (351)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCHHHHHH-HHhC--CCCCC
Confidence            9999985 8999999999999999 798998888776544 333   33221   2444433222222 2211  12499


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.+.|
T Consensus       244 ~vid~~g  250 (351)
T cd08233         244 VSFDCAG  250 (351)
T ss_pred             EEEECCC
Confidence            9999988

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.22  E-value=0.37  Score=47.08  Aligned_cols=75  Identities=13%  Similarity=0.174  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|+|+ |++|..+++.+...|+. |+++++++++.+.+ +++   |....   .|..+. ++..+.+.++.   ++.+
T Consensus       196 ~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~---~~g~  264 (378)
T PLN02827        196 SVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVTDF---INPNDLSEPIQQVIKRMT---GGGA  264 (378)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcEE---EcccccchHHHHHHHHHh---CCCC
Confidence            9999985 99999999988889984 77788887765543 333   43221   243332 23444443332   1469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.++|
T Consensus       265 d~vid~~G  272 (378)
T PLN02827        265 DYSFECVG  272 (378)
T ss_pred             CEEEECCC
Confidence            99999998

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.21  E-value=0.35  Score=47.34  Aligned_cols=40  Identities=18%  Similarity=0.192  Sum_probs=35.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL   51 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~   51 (367)
                      +++|+|++|++|.+++..+...|++|+.++++.++.+.+.
T Consensus       196 ~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~  235 (393)
T cd08246         196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR  235 (393)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence            9999999999999999988899999988988887765543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.21  E-value=0.13  Score=48.02  Aligned_cols=43  Identities=16%  Similarity=0.163  Sum_probs=37.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++|.|| ||-|++++-.|++.|+ +|.+++|+.++++++.+.+
T Consensus       123 ~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        123 LVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            48999986 9999999999999998 6999999999888877654

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.21  E-value=0.27  Score=46.62  Aligned_cols=74  Identities=15%  Similarity=0.205  Sum_probs=48.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+||++++|.++++..... |++|+.++++.++.+.+ +++   +.+.. +  |-.+  ...+.+.+.   .++++|
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~---g~~~~-~--~~~~--~~~~~i~~~---~~~~vd  218 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LEL---GAHHV-I--DHSK--PLKAQLEKL---GLEAVS  218 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHc---CCCEE-E--ECCC--CHHHHHHHh---cCCCCC
Confidence            9999999999999988766666 99999999888765555 333   33222 2  2111  222223322   114699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.+
T Consensus       219 ~vl~~~~  225 (336)
T TIGR02817       219 YVFSLTH  225 (336)
T ss_pred             EEEEcCC
Confidence            9998764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.18  E-value=0.31  Score=47.84  Aligned_cols=40  Identities=15%  Similarity=0.116  Sum_probs=34.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      .+++|+|++|++|.++++.+...|++|+.++++.++.+.+
T Consensus       191 ~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       191 DNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            3999999999999999999999999988888887665444

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.13  E-value=0.47  Score=44.90  Aligned_cols=42  Identities=12%  Similarity=0.019  Sum_probs=34.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++.|.|| |.+|..++..++..|. .|++.+++++.++....++
T Consensus         4 KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl   46 (307)
T PRK06223          4 KISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI   46 (307)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence            6899999 9999999999999875 9999999887765544333

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.12  E-value=0.44  Score=44.83  Aligned_cols=75  Identities=17%  Similarity=0.337  Sum_probs=48.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhc--CCcEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLK--GLKVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~--~~~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|++.+++.+.+.  +.++..+..++.
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            4788885 8999999999999998 68887754                   23444444555443  335555556665


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +.+  .+++        ...|++|.+..
T Consensus        80 ~~~--~~f~--------~~fdvVi~alD   97 (291)
T cd01488          80 DKD--EEFY--------RQFNIIICGLD   97 (291)
T ss_pred             chh--HHHh--------cCCCEEEECCC
Confidence            432  2222        45788777543

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=94.09  E-value=0.68  Score=45.53  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=47.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++| +|+|+||..++..+...|++++. ++++.++++.+ +++   |...    .|..+..++.+.+.++...  ..+
T Consensus       187 ~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~---Ga~~----v~~~~~~~~~~~v~~~~~~--~g~  255 (393)
T TIGR02819       187 STVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF---GCET----VDLSKDATLPEQIEQILGE--PEV  255 (393)
T ss_pred             CEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc---CCeE----EecCCcccHHHHHHHHcCC--CCC
Confidence            38999 45699999999988889997554 55666555443 333   4331    2333222233333332211  359


Q ss_pred             cEEEEcCCCC
Q 035642           90 NLLVNNAAVA   99 (367)
Q Consensus        90 D~lI~~Ag~~   99 (367)
                      |++|.+.|..
T Consensus       256 Dvvid~~G~~  265 (393)
T TIGR02819       256 DCAVDCVGFE  265 (393)
T ss_pred             cEEEECCCCc
Confidence            9999999964

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=94.01  E-value=0.6  Score=43.38  Aligned_cols=86  Identities=27%  Similarity=0.331  Sum_probs=55.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCEEEEEeC-------ChhH----HHHHHHHHH-hcCCcEEEEEccCCCHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELA-GFGAIIHTCSR-------NQTE----LNERLQEWK-LKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~-~~G~~Vi~~~R-------~~~~----~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      ++|||.|||+|-|++.--..+ ..|+.-+++.-       .+..    -....+++. +.|--..-+..|.-+.+.-+.+
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~kv  121 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQKV  121 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHHH
Confidence            399999999999987543332 25665555422       1110    012222332 3354456667788887888888


Q ss_pred             HHHHHHHcCCCccEEEEcCC
Q 035642           78 METVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      ++.+++.+ |++|.+|+.-+
T Consensus       122 Ie~Ik~~~-g~vDlvvYSlA  140 (398)
T COG3007         122 IEAIKQDF-GKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHhh-ccccEEEEecc
Confidence            99999999 89999997643

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.01  E-value=0.4  Score=45.76  Aligned_cols=73  Identities=22%  Similarity=0.448  Sum_probs=48.3

Q ss_pred             C-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 Q-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      + +++|+|++|++|.++++.....|++|+.+.++ ++. +..+++   +...   ..|..+.+..+.+    .. . +.+
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~---g~~~---~~~~~~~~~~~~l----~~-~-~~v  228 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSL---GADD---VIDYNNEDFEEEL----TE-R-GKF  228 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHh---CCce---EEECCChhHHHHH----Hh-c-CCC
Confidence            5 99999999999999999999999999888765 222 233333   3221   1244443333322    22 2 469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.++++.|
T Consensus       229 d~vi~~~g  236 (350)
T cd08248         229 DVILDTVG  236 (350)
T ss_pred             CEEEECCC
Confidence            99999887

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.95  E-value=0.22  Score=46.67  Aligned_cols=37  Identities=14%  Similarity=0.220  Sum_probs=32.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN   43 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~   43 (367)
                      .+++| +++|.|+++-.|+.++..|+++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            35666 99999998889999999999999999988874

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=93.84  E-value=0.39  Score=46.49  Aligned_cols=75  Identities=12%  Similarity=0.179  Sum_probs=48.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|.|+ |++|..+++.....|+ +|+.++++.++.+.+ +++   +....   .|..+. ..+.+.+.+...   +.+
T Consensus       187 ~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~~~~~~~~~~~~---~g~  255 (365)
T cd08277         187 TVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF---GATDF---INPKDSDKPVSEVIREMTG---GGV  255 (365)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCcE---eccccccchHHHHHHHHhC---CCC
Confidence            9999975 9999999998888999 799999988776554 333   33211   132221 122222333222   469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.+.|
T Consensus       256 d~vid~~g  263 (365)
T cd08277         256 DYSFECTG  263 (365)
T ss_pred             CEEEECCC
Confidence            99999988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK07411 hypothetical protein; Validated

Probab=93.79  E-value=0.43  Score=46.93  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=52.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcC--CcEEEEE
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKG--LKVTGSV   65 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~--~~~~~~~   65 (367)
                      +++ +|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .|.+.+++.+++.+  .++..+.
T Consensus        36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~  114 (390)
T PRK07411         36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE  114 (390)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence            345 8999987 7999999999999998 788887642                   34455555555433  3455555


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           66 CDLSSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        66 ~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      ..++.. ...+++        ...|++|.+..
T Consensus       115 ~~~~~~-~~~~~~--------~~~D~Vvd~~d  137 (390)
T PRK07411        115 TRLSSE-NALDIL--------APYDVVVDGTD  137 (390)
T ss_pred             cccCHH-hHHHHH--------hCCCEEEECCC
Confidence            455542 333333        45788887765

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.78  E-value=0.38  Score=45.95  Aligned_cols=74  Identities=15%  Similarity=0.204  Sum_probs=47.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.|++|++|.+++..+...|++|+.++++. +.+.+ +++   +.. .+.  +-.+ ....+ . ....  +..+|
T Consensus       179 ~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~---g~~-~~~--~~~~-~~~~~-~-~~~~--~~~~d  245 (350)
T cd08274         179 ETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RAL---GAD-TVI--LRDA-PLLAD-A-KALG--GEPVD  245 (350)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-Hhc---CCe-EEE--eCCC-ccHHH-H-HhhC--CCCCc
Confidence            3999999999999999999999999998888654 43333 332   432 111  2221 22222 1 1111  14699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus       246 ~vi~~~g  252 (350)
T cd08274         246 VVADVVG  252 (350)
T ss_pred             EEEecCC
Confidence            9999887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.76  E-value=0.53  Score=41.69  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=26.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|++ |+|.++++.|+..|. ++.+++.+
T Consensus        21 ~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          21 KVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             cEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            78888875 599999999999998 58888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=93.74  E-value=1  Score=39.44  Aligned_cols=75  Identities=23%  Similarity=0.156  Sum_probs=56.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.+ +|+=-|++.|+ .+++-  +-.|+ +|++++.+++.++.+.+...+.++++.++.+|+++..             
T Consensus        43 ~l~g~~V~DlG~GTG~-La~ga--~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-------------  106 (198)
T COG2263          43 DLEGKTVLDLGAGTGI-LAIGA--ALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR-------------  106 (198)
T ss_pred             CcCCCEEEEcCCCcCH-HHHHH--HhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-------------
Confidence            4567 78888877665 23333  33485 7999999999888877777766788999999998753             


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                       +++|.+|-|.-..
T Consensus       107 -~~~dtvimNPPFG  119 (198)
T COG2263         107 -GKFDTVIMNPPFG  119 (198)
T ss_pred             -CccceEEECCCCc
Confidence             7899999997554

>smart00829 PKS_ER Enoylreductase

Probab=93.73  E-value=0.37  Score=43.95  Aligned_cols=39  Identities=15%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      +++|.|+++++|..++......|++|+.++++.++.+.+
T Consensus       107 ~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      107 SVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            999999999999999988889999999999988776654

Enoylreductase in Polyketide synthases.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.70  E-value=0.39  Score=42.50  Aligned_cols=31  Identities=19%  Similarity=0.344  Sum_probs=26.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        23 ~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          23 RILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             cEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            7888875 6699999999999998 68888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.62  E-value=0.32  Score=48.18  Aligned_cols=40  Identities=15%  Similarity=0.197  Sum_probs=34.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE   49 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~   49 (367)
                      +.+ +++|.|. |.||+.+++.|...|++|+++++++.+...
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            456 9999997 799999999999999999999999876543

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.58  E-value=0.72  Score=43.64  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=57.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||.|| |-||.......-.-|+ +|++++-.+.+++-+.+ +   |.+...-...-++.+.+.+.+++....  ...|
T Consensus       172 ~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~---Ga~~~~~~~~~~~~~~~~~~v~~~~g~--~~~d  244 (354)
T KOG0024|consen  172 KVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F---GATVTDPSSHKSSPQELAELVEKALGK--KQPD  244 (354)
T ss_pred             eEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h---CCeEEeeccccccHHHHHHHHHhhccc--cCCC
Confidence            9999998 7899999888888898 79999999988876655 5   545443333333455555555555433  2489


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +.|.|.|.
T Consensus       245 ~~~dCsG~  252 (354)
T KOG0024|consen  245 VTFDCSGA  252 (354)
T ss_pred             eEEEccCc
Confidence            99999995

>cd05295 MDH_like Malate dehydrogenase-like

Probab=93.58  E-value=0.44  Score=47.53  Aligned_cols=113  Identities=12%  Similarity=0.075  Sum_probs=68.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC---CC----EEEEEeC--ChhHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGF---GA----IIHTCSR--NQTELNERLQEWKLKG----LKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~---G~----~Vi~~~R--~~~~~~~~~~~l~~~~----~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +|+||||+|-||.++.-.+++-   |.    .+++++.  +.++++..+-++....    ..+.+. .|  +    .+.+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~----~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--L----DVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--C----HHHh
Confidence            8999999999999999999862   42    4677888  5777777666665421    112221 11  1    1222


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                              ...|++|.+||.....   ..+   -.+.++.|..-.-...+.+.++-  .+.-+|+.+.|
T Consensus       198 --------~daDvvIitag~prk~---G~~---R~DLL~~N~~Ifk~~g~~I~~~a--~~~~~VlVv~t  250 (452)
T cd05295         198 --------KDAHVIVLLDDFLIKE---GED---LEGCIRSRVAICQLYGPLIEKNA--KEDVKVIVAGR  250 (452)
T ss_pred             --------CCCCEEEECCCCCCCc---CCC---HHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEeC
Confidence                    5689999999974321   122   34556677655555555554431  11245666554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.58  E-value=0.41  Score=47.30  Aligned_cols=42  Identities=14%  Similarity=0.127  Sum_probs=35.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL   51 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~   51 (367)
                      +.+ +|+|.|+ |.||+.+++.+...|++|+++++++.+++.+.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            456 9999998 58999999999999999999999987765443

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.55  E-value=0.75  Score=46.12  Aligned_cols=39  Identities=18%  Similarity=0.251  Sum_probs=33.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL   47 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~   47 (367)
                      .+.| +++|.|.+ .||+.+|+.|...|++|+++++++.+.
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            4566 99999975 699999999999999999998887654

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=93.53  E-value=0.42  Score=45.79  Aligned_cols=75  Identities=16%  Similarity=0.229  Sum_probs=47.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++|+| +|++|..+++.+...|++ |+.++++.++.+.+ +++   +... ++  |..+.. .+++.+.. ..  .++
T Consensus       162 ~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~---Ga~~-~i--~~~~~~-~~~~~~~~-~~--~~~  229 (347)
T PRK10309        162 KNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSL---GAMQ-TF--NSREMS-APQIQSVL-RE--LRF  229 (347)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCce-Ee--cCcccC-HHHHHHHh-cC--CCC
Confidence            3999997 499999999988899996 67888888776643 333   3322 12  322222 22222222 11  357


Q ss_pred             c-EEEEcCC
Q 035642           90 N-LLVNNAA   97 (367)
Q Consensus        90 D-~lI~~Ag   97 (367)
                      | +++.++|
T Consensus       230 d~~v~d~~G  238 (347)
T PRK10309        230 DQLILETAG  238 (347)
T ss_pred             CeEEEECCC
Confidence            7 8888888

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.50  E-value=0.43  Score=46.43  Aligned_cols=75  Identities=13%  Similarity=0.229  Sum_probs=50.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|.| +|++|.+++..+...|+ +|+.++++.++.+.+ +++   |... +  .+..+. +...+.+.+...   +.+
T Consensus       193 ~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~~---~~~  261 (373)
T cd08299         193 TCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL---GATE-C--INPQDYKKPIQEVLTEMTD---GGV  261 (373)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCce-E--ecccccchhHHHHHHHHhC---CCC
Confidence            899996 59999999999999999 799999988776655 333   3221 1  122221 123333333322   469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.++++.|
T Consensus       262 d~vld~~g  269 (373)
T cd08299         262 DFSFEVIG  269 (373)
T ss_pred             eEEEECCC
Confidence            99999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.49  E-value=0.55  Score=44.53  Aligned_cols=40  Identities=15%  Similarity=0.334  Sum_probs=35.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      .+++|.|+++.+|.++++.+...|++|+.++++.++.+.+
T Consensus       164 ~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        164 ETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3999999999999999999999999999999988776554

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=93.49  E-value=0.38  Score=45.95  Aligned_cols=75  Identities=16%  Similarity=0.245  Sum_probs=48.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+++|.|+++++|.++++.+...|++|+.+. +.++.+.+ +.+   |....   .|..+.+..+. +.+.   .++.+|
T Consensus       156 ~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~-l~~~---~~~~~d  223 (339)
T cd08249         156 KPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSL---GADAV---FDYHDPDVVED-IRAA---TGGKLR  223 (339)
T ss_pred             CEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-Hhc---CCCEE---EECCCchHHHH-HHHh---cCCCee
Confidence            3999999999999999999999999998877 44554443 333   33221   23333222222 2222   225699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus       224 ~vl~~~g  230 (339)
T cd08249         224 YALDCIS  230 (339)
T ss_pred             EEEEeec
Confidence            9999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.47  E-value=0.3  Score=37.39  Aligned_cols=41  Identities=24%  Similarity=0.314  Sum_probs=34.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC---CEEEEE-eCChhHHHHHHHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFG---AIIHTC-SRNQTELNERLQEW   54 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G---~~Vi~~-~R~~~~~~~~~~~l   54 (367)
                      +.|. |+|.+|.++++.|++.|   .+|.++ +|++++.+++.+++
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            4555 67999999999999999   899855 99999988887765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.46  E-value=0.46  Score=44.83  Aligned_cols=62  Identities=21%  Similarity=0.258  Sum_probs=45.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS-SREQREKLMET   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dls-d~~sv~~~~~~   80 (367)
                      .+-|+|+.| +|.--++.-.+-|++|++++++..+-+++.+.+   |++..   +|.+ |++.++++.+.
T Consensus       184 ~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  184 WVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIMKT  246 (360)
T ss_pred             EEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHHHh
Confidence            899999977 996655555577999999999987777777666   44433   2566 77777777643

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=93.43  E-value=1.3  Score=40.33  Aligned_cols=134  Identities=16%  Similarity=0.164  Sum_probs=78.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCCcEEEEEc-cCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGLKVTGSVC-DLSS   70 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~~~~~~~~-Dlsd   70 (367)
                      .|+|.|. ||.|..+++.|++-|. ++.+++-+.                   .+.+-..+.+..-++.+.+... |+-.
T Consensus        32 ~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t  110 (263)
T COG1179          32 HVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFIT  110 (263)
T ss_pred             cEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhC
Confidence            7888887 8999999999999998 677776532                   2333344444444555554444 5666


Q ss_pred             HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           71 REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++.+++++.       ..+|++|-+---                     +..=..++..+    .+++   |-++||..+
T Consensus       111 ~en~~~~~~-------~~~DyvIDaiD~---------------------v~~Kv~Li~~c----~~~k---i~vIss~Ga  155 (263)
T COG1179         111 EENLEDLLS-------KGFDYVIDAIDS---------------------VRAKVALIAYC----RRNK---IPVISSMGA  155 (263)
T ss_pred             HhHHHHHhc-------CCCCEEEEchhh---------------------hHHHHHHHHHH----HHcC---CCEEeeccc
Confidence            777777763       457887765421                     11122233333    3333   333444332


Q ss_pred             --ccCCCCCccHHHHHHHHHHHHHHHHHHhCCC
Q 035642          151 --VTAAPLTPLYGPYNGAMNQLTKHLECEQAKD  181 (367)
Q Consensus       151 --~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  181 (367)
                        ...+.....-..||.-..-+++-++.+++++
T Consensus       156 g~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~  188 (263)
T COG1179         156 GGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR  188 (263)
T ss_pred             cCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence              2222223344567777788888888888765

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.34  E-value=0.34  Score=39.13  Aligned_cols=42  Identities=17%  Similarity=0.139  Sum_probs=30.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-E-EEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-I-IHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~-Vi~~~R~~~~~~~~~~~   53 (367)
                      +|.|.||||.+|..+++.|+++-. . +.+++++.+....+...
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~   44 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEV   44 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehh
Confidence            588999999999999999998643 5 44556665344444333

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=93.33  E-value=1.2  Score=43.16  Aligned_cols=75  Identities=15%  Similarity=0.234  Sum_probs=48.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      +|+|+|+ |-||.-.+..+...|+ +|+++++++++++.+.+..   +.....   +....+....    +.+..+| .+
T Consensus       171 ~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~---g~~~~~---~~~~~~~~~~----~~~~t~g~g~  239 (350)
T COG1063         171 TVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG---GADVVV---NPSEDDAGAE----ILELTGGRGA  239 (350)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC---CCeEee---cCccccHHHH----HHHHhCCCCC
Confidence            8999987 8999999888888897 6888899998887665533   222211   2222222222    2222213 59


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |++|-++|
T Consensus       240 D~vie~~G  247 (350)
T COG1063         240 DVVIEAVG  247 (350)
T ss_pred             CEEEECCC
Confidence            99999999

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.32  E-value=0.6  Score=45.98  Aligned_cols=31  Identities=19%  Similarity=0.349  Sum_probs=27.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        44 ~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         44 RVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            8999987 7999999999999998 78888764

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=93.29  E-value=0.42  Score=45.25  Aligned_cols=75  Identities=11%  Similarity=0.165  Sum_probs=50.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|.|++|++|..++......| ++|+.++++.++.+.+ +++   +.+. +  .|-.+  +..+.+...   .++++
T Consensus       151 ~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~--~~~~~i~~~---~~~~~  218 (336)
T cd08252         151 KTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KEL---GADH-V--INHHQ--DLAEQLEAL---GIEPV  218 (336)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCcE-E--EeCCc--cHHHHHHhh---CCCCC
Confidence            399999999999999999999999 9999999887765554 333   3322 1  23221  222222222   11469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++++.|
T Consensus       219 d~vl~~~~  226 (336)
T cd08252         219 DYIFCLTD  226 (336)
T ss_pred             CEEEEccC
Confidence            99999877

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=93.28  E-value=0.78  Score=43.55  Aligned_cols=119  Identities=14%  Similarity=0.043  Sum_probs=69.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++.|.|+ |.+|..+|..|+..|. +|++++++++..+...-++...+. .......++-..+.++ +        ...|
T Consensus         3 KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~-~~~~~~~i~~t~d~~~-~--------~~aD   71 (305)
T TIGR01763         3 KISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP-VGGFDTKVTGTNNYAD-T--------ANSD   71 (305)
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh-ccCCCcEEEecCCHHH-h--------CCCC
Confidence            5788897 8999999999999886 899999976644422222222111 0000001110011111 1        4579


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++|-+||.....   +.+.   .+.+..|..-...+.+.+.++.   ..+.||++|-...
T Consensus        72 iVIitag~p~~~---~~sR---~~l~~~N~~iv~~i~~~I~~~~---p~~~iIv~tNP~d  122 (305)
T TIGR01763        72 IVVITAGLPRKP---GMSR---EDLLSMNAGIVREVTGRIMEHS---PNPIIVVVSNPLD  122 (305)
T ss_pred             EEEEcCCCCCCc---CCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEecCcHH
Confidence            999999964321   1222   2356677777777777766652   3467887776443

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=93.28  E-value=0.32  Score=45.24  Aligned_cols=81  Identities=17%  Similarity=0.227  Sum_probs=62.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++=-||+++.|+++.+-....|++-+-+.|+.+..+++.+.++..|....+-.-.+.+.     -..+....+ .++..
T Consensus       163 ~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~-----~~~k~~~~~-~~prL  236 (354)
T KOG0025|consen  163 SVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR-----KMKKFKGDN-PRPRL  236 (354)
T ss_pred             eeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch-----hhhhhhccC-CCceE
Confidence            888899999999999999999999999999999999999999988776655433333333     223332344 67899


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      -+||.|.
T Consensus       237 alNcVGG  243 (354)
T KOG0025|consen  237 ALNCVGG  243 (354)
T ss_pred             EEeccCc
Confidence            9999984

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=93.26  E-value=0.75  Score=35.56  Aligned_cols=68  Identities=19%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             CCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEc
Q 035642           18 GTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNN   95 (367)
Q Consensus        18 as~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~   95 (367)
                      |+|...+.+++.+ +.|  .++++++.+++.++...+.....+.++.++..|+.+...          .. ++.|+++.+
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~~----------~~-~~~D~v~~~   74 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLPF----------SD-GKFDLVVCS   74 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHHH----------HS-SSEEEEEE-
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCcc----------cC-CCeeEEEEc
Confidence            5566777777777 667  799999999999988888877666788999999987421          11 689999996


Q ss_pred             CC
Q 035642           96 AA   97 (367)
Q Consensus        96 Ag   97 (367)
                      .+
T Consensus        75 ~~   76 (101)
T PF13649_consen   75 GL   76 (101)
T ss_dssp             TT
T ss_pred             CC
Confidence            65

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.19  E-value=0.041  Score=43.30  Aligned_cols=37  Identities=16%  Similarity=0.167  Sum_probs=32.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      +++++ ++||.|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            56777 9999999 8999999999999999999999885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	367
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		1e-81
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-75
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-71
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-71
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		8e-29
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-27
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		6e-27
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-24
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-23
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-22
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-21
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		9e-21
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-21
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-20
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		6e-20
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-19
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-19
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		3e-19
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		5e-19
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-18
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-18
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-18
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-18
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-18
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		4e-18
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-18
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-17
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-17
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-17
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-17
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-17
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-17
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-17
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-17
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-17
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-17
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-17
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-17
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-17
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-17
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-17
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-17
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-17
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		6e-17
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-17
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		7e-17
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		8e-17
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		8e-17
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		9e-17
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-16
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		1e-16
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-16
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-16
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-16
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-16
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-16
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-16
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		5e-16
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		6e-16
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-16
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-15
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-15
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-15
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-15
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-15
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-15
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		4e-15
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-15
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		5e-15
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		6e-15
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-15
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-15
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-15
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		7e-15
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-15
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		8e-15
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-14
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-14
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-14
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-14
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-14
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-14
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		7e-14
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-13
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-13
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-13
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-13
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-13
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-13
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-13
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-13
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-13
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-13
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-13
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		5e-13
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		6e-13
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		7e-13
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-12
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-12
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-12
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-12
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-12
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		3e-12
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-12
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-12
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		9e-12
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-11
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-11
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		1e-11
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		1e-11
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-11
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		2e-11
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-11
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		3e-11
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-11
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-11
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-11
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		4e-11
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		6e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		7e-11
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		7e-11
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		8e-11
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-10
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-10
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-10
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-10
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-10
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-10
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		3e-10
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-10
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		5e-10
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-10
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		6e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		9e-10
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-09
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		1e-09
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-09
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		2e-09
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-09
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		3e-09
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		3e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-09
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		4e-09
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		5e-09
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-09
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		6e-09
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		7e-09
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		8e-09
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		9e-09
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		9e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-08
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-08
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		4e-08
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		8e-08
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		8e-08
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		1e-07
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-07
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-07
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-07
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-07
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-07
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-07
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-07
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-07
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-07
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		2e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-07
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-07
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-07
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		3e-07
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-07
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		4e-07
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		4e-07
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		4e-07
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-07
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		7e-07
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-06
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		2e-06
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-06
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		2e-06
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		3e-06
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		3e-06
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		3e-06
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		4e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		4e-06
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		6e-06
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		6e-06
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		6e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		7e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		8e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		9e-06
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		9e-06
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		9e-06
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		9e-06
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		1e-05
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		1e-05
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		1e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-05
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-05
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-05
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-05
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		3e-05
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		3e-05
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		4e-05
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		4e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		5e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		5e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		5e-05
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		5e-05
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		5e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		5e-05
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		5e-05
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		5e-05
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-04
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		4e-04
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		4e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		5e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-04
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		6e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		7e-04
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		7e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-04
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		8e-04
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		8e-04

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  299 bits (766), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/256 (58%), Positives = 185/256 (72%), Gaps = 4/256 (1%)
Query: 6   WWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           W    +   +TGGT+GIGHAIVEE AGFGA+IHTC+RN+ ELNE L +W+ KG +VTGSV
Sbjct: 10  WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
           CD S R +REKLM+TVSS+F GK             K  LD TAE  S   STN ES +H
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           LS+LAHPLLKASG G I+F+SS+AGV +A +  +Y    GA+NQL ++L CE A D IRA
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++AP VI T L++A+  D  K K+V   +SR P+ R GEP+EVSSLVAFLC PAASYIT
Sbjct: 190 NAVAPAVIATPLAEAVYDDEFK-KVV---ISRKPLGRFGEPEEVSSLVAFLCMPAASYIT 245
Query: 246 GQVICVDGGMTVNGFN 261
           GQ ICVDGG+TVNGF+
Sbjct: 246 GQTICVDGGLTVNGFS 261

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 179/247 (72%), Gaps = 1/247 (0%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG++GIG+AIVEELAG GA ++TCSRN+ EL+E L+ W+ KGL V GSVCDL SR +
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 84
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R+KLM+TV+ +F GK             KEA D T +  + +  TNFE+ +HLS++A+PL
Sbjct: 85  RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 144
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS NG ++F+SS+AG +A P   LY    GA+NQ+TK L CE AKDNIR NS+APGVI
Sbjct: 145 LKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVI 204
Query: 194 RTSLSD-AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T L + AI+ +P + + ++  + +TP+ R G+P EVS+L+AFLCFPAASYITGQ+I  D
Sbjct: 205 LTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWAD 264
Query: 253 GGMTVNG 259
           GG T NG
Sbjct: 265 GGFTANG 271

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 133/248 (53%), Positives = 168/248 (67%), Gaps = 1/248 (0%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+RGIG+ IVEELA  GA ++TCSRNQ ELN+ L +W+ KG KV  SVCDLSSR +
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 72
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R++LM TV++ F GK             KEA D T E  S + S NFE+ +HLS LAHP 
Sbjct: 73  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 132
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS  G +VFISSV+G  A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI
Sbjct: 133 LKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 192
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TSL +    DP + + +  L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDG
Sbjct: 193 ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 252
Query: 254 GMTVN-GF 260
           G+  N GF
Sbjct: 253 GLMANCGF 260

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 133/248 (53%), Positives = 168/248 (67%), Gaps = 1/248 (0%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+RGIG+ IVEELA  GA ++TCSRNQ ELN+ L +W+ KG KV  SVCDLSSR +
Sbjct: 12  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R++LM TV++ F GK             KEA D T E  S + S NFE+ +HLS LAHP 
Sbjct: 72  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS  G +VFISSV+G  A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI
Sbjct: 132 LKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 191
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TSL +    DP + + +  L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDG
Sbjct: 192 ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 251
Query: 254 GMTVN-GF 260
           G+  N GF
Sbjct: 252 GLMANCGF 259

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 121/244 (49%), Gaps = 9/244 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  +++ +   + +GL VTG+VC +   E 
Sbjct: 19  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAED 78
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           RE+L+ T   +  G                 +D T E        N ++   ++K   P 
Sbjct: 79  RERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPE 138
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           ++  G G +V +SS+A  +    +P + PYN    A+  LTK L  E A  NIR N +AP
Sbjct: 139 MEKRGGGSVVIVSSIAAFSP---SPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAP 195
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G+I+TS S  +  D  K    E +     I R GEP++ + +V+FLC   ASYITG+ + 
Sbjct: 196 GLIKTSFSRMLWMDKEKE---ESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVV 252
Query: 251 VDGG 254
           V GG
Sbjct: 253 VGGG 256

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 120/244 (49%), Gaps = 9/244 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T  T GIG AI   LA  GA +   SR Q  ++  +   + +GL VTG+VC +   E 
Sbjct: 18  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAED 77
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           RE+L+    ++  G                 +D T E    +   N ++   ++K   P 
Sbjct: 78  RERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPE 137
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           ++  G G ++ +SSV    A    P  GPYN    A+  LTK+L  E A  NIR N +AP
Sbjct: 138 MEKRGGGSVLIVSSVG---AYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G+I+T+ S  +  D A+    E +     I R G P++ + +V+FLC   ASYITG+ + 
Sbjct: 195 GLIKTNFSQVLWMDKARK---EYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVV 251
Query: 251 VDGG 254
           V GG
Sbjct: 252 VGGG 255

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 8/248 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            +TGG+RG+G  I + LA  G  +   SRN  E +E  Q+   K G++     CD+S+ E
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           + +KL+E V   F GK               A +   +    +   N    +++ + A  
Sbjct: 85  EVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS 143
Query: 133 LLKASGNGIIVFISS--VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           LL+ S N  I+ I S  V  VT  P    Y    G +  LTK L  E  +  IR N IAP
Sbjct: 144 LLRESDNPSIINIGSLTVEEVTM-PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP 202
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G  RT +++A+  DP K   ++ ++ R P+ R G P+++  +  FL    A Y+TGQ+I 
Sbjct: 203 GWYRTKMTEAVFSDPEK---LDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIF 259
Query: 251 VDGGMTVN 258
           VDGG T N
Sbjct: 260 VDGGWTAN 267

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 27/249 (10%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE----RLQEWKLKGLKVTGSVC 66
           Q   +TGG+ GIG AI  + A  GA +     +   ++     R++  +L          
Sbjct: 12  QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREEL---------- 61
Query: 67  DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
           D++  ++ ++L E +      +             +E  D  A +   LR  N  +    
Sbjct: 62  DITDSQRLQRLFEALP-----RLDVLVNNAGISRDREEYDL-ATFERVLR-LNLSAAMLA 114
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           S+LA PLL   G G I+ I+S+     +   P Y    GA+ QLT+ L CE A + IR N
Sbjct: 115 SQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVN 173
Query: 187 SIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +IAPG I T L   ++ D  A  +I++    RTP+ R GE  EV+S  AFLC P AS++T
Sbjct: 174 AIAPGWIDTPLGAGLKADVEATRRIMQ----RTPLARWGEAPEVASAAAFLCGPGASFVT 229
Query: 246 GQVICVDGG 254
           G V+ VDGG
Sbjct: 230 GAVLAVDGG 238

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RG+G AI  +L   GA I+   S   T L+   +E+K  G+ V  +  D+ + E
Sbjct: 9   IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE 68
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++T    F G+                L  + +    + +TN +S +  +K    
Sbjct: 69  DVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSK 127
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++    +G I+ I+S+AG+        Y      +   TK +  E A   I  N++APG+
Sbjct: 128 IMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGI 187
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I+T ++D +      +K+ E  ++  P+ R G P+EV+++V FL    ++YITGQVI +D
Sbjct: 188 IKTDMTDVL-----PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINID 242
Query: 253 GGMTV 257
           GG+ +
Sbjct: 243 GGLVM 247

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 10  EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
           E+   +TGG+RGIG AI E L   G  +   SRN  E  + L    L          DL 
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLP--------TDLE 53
Query: 70  SREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
             + +  +   + ++  G              K AL+ + E    +   + +  F L++ 
Sbjct: 54  KDDPKGLVKRALEAL--GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQA 111
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPL--YGPYNGAMNQLTKHLECEQAKDNIRANS 187
           A P +  +G G ++FI SV   TA    P+  Y     A+  LT+ L  E A+  IR N 
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           + PG + T  +  +R +P   ++ E + +R P+ R   P+E++ + A LC   A Y+TGQ
Sbjct: 172 LCPGYVETEFTLPLRQNP---ELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQ 228
Query: 248 VICVDGGM 255
            + VDGG 
Sbjct: 229 AVAVDGGF 236

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 10/250 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   +TGG RGIG AI +  A  GA++  C            E K     + G+   +  
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--------EGKEVAEAIGGAFFQVDL 58
Query: 71  REQREKLMETVSSIFQ-GKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
            ++RE++     + +  G+            P  AL         +   N  +  HLS L
Sbjct: 59  EDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSAL 118
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A   ++  G G IV ++SV G+ A      Y    G +  LT+ L  + A   IR N++A
Sbjct: 119 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178
Query: 190 PGVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           PG I T ++ +AI   P   +          + R G+P+EV+  V FL    AS+ITG +
Sbjct: 179 PGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAI 238
Query: 249 ICVDGGMTVN 258
           + VDGGMT +
Sbjct: 239 LPVDGGMTAS 248

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           +Y +    +   +TG  RGIG  I + LA   + +   SR Q   +  + E K  G + +
Sbjct: 37  NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS 96
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEAL---DTTAEYMSTLRSTN 119
           G   D+S   ++E++ E ++ I                 ++ L       E+   LR TN
Sbjct: 97  GYAGDVS---KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLR-TN 152
Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
             S+F++++     +  +  G I+ ISS+ G+T       Y      +   TK L  E A
Sbjct: 153 LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA 212
Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
             NI  N+IAPG I + ++D I     KN     ++S  P  R G P+EV++L  FL   
Sbjct: 213 SRNITVNAIAPGFISSDMTDKISEQIKKN-----IISNIPAGRMGTPEEVANLACFLSSD 267
Query: 240 AASYITGQVICVDGGMT 256
            + YI G+V  +DGG++
Sbjct: 268 KSGYINGRVFVIDGGLS 284

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           ++Q   +TG +RGIG AI  ELA  GA++   +  +         +K  GL+  G+V ++
Sbjct: 27  DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV 86
Query: 69  SSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           +     + L+E+    F G              + A+    +    +  TN ++VF LS+
Sbjct: 87  NDATAVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145
Query: 129 -LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            +  P++KA G G IV I+SV G    P    Y      +  +T+ L  E     I  N 
Sbjct: 146 AVLRPMMKARG-GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNC 204
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I T ++  +   P + +    L ++ P+ R G P++++  VAFL  P A YITG 
Sbjct: 205 VAPGFIDTDMTKGL---PQEQQTA--LKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT 259
Query: 248 VICVDGGM 255
            + V+GGM
Sbjct: 260 TLHVNGGM 267

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI  +LA  GA ++   + N+ + NE + E K  G        D+++ E
Sbjct: 8   LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAE 67
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               +++    +F G+                +    E   T+ +TN + VF  +K    
Sbjct: 68  DVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSR 126
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +    +G IV I+SV GVT  P    Y      +  LTK    E A  NI  N+IAPG 
Sbjct: 127 FMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGF 186
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++D +  +     I   ++   P  + GE  ++++ V F     + YITGQ + VD
Sbjct: 187 IATDMTDVLDEN-----IKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVD 241
Query: 253 GGM 255
           GGM
Sbjct: 242 GGM 244

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 58  GLKVTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRS 117
           G K  G  C+++  + RE +++     F GK            PK   D           
Sbjct: 60  GGKAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEWAFK 117
Query: 118 TNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
            N  S+F LS+LA P ++ +G G I+ ISS+AG         YG    A+N LT+++  +
Sbjct: 118 LNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFD 177
Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRH--DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
                IR N+IAPG I+T   DA+     P   +I   ++  TP+ R GE  ++++   F
Sbjct: 178 VGPMGIRVNAIAPGAIKT---DALATVLTP---EIERAMLKHTPLGRLGEAQDIANAALF 231
Query: 236 LCFPAASYITGQVICVDGG 254
           LC PAA++I+GQV+ V GG
Sbjct: 232 LCSPAAAWISGQVLTVSGG 250

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Query: 103 EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG--VTAAPLTPLY 160
           +AL+T       + + N + +F  S+     + A G G IV + S++G  V        Y
Sbjct: 100 DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY 159
Query: 161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI 220
               GA++QLT+ L  E A   +R N++APG + T ++  +R  P   ++ E  +  TP+
Sbjct: 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP---ELFETWLDMTPM 216
Query: 221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
            R GEP E+++   FL  PAASY+TG ++ VDGG TV
Sbjct: 217 GRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV 253

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG  I    A  GA +     N    N  + E +  G +     CD++S ++ 
Sbjct: 16  ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL 75
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L +   S   GK            PK   D            N  S FHLS+L  P +
Sbjct: 76  SALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEM 133
Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           + +G G+I+ I+S+A          Y     A + L +++  +  + NIR N IAPG I 
Sbjct: 134 EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI- 192
Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
             L+DA++      +I + ++  TPI R G+P ++++   FLC PAAS+++GQ++ V GG
Sbjct: 193 --LTDALKS-VITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 12/254 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-----KGLKVTGSV 65
           Q   +TGG  GIG AIV+EL   G+ +   SR    L     E +      K  +V    
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
           C++ + E+   L+++    F GK               A   +++    +  TN    F+
Sbjct: 79  CNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFY 137
Query: 126 LSKLAHP-LLKASGNGII-VFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
           + K  +   +K  G  I+ + + + AG    PL    G     +  LTK L  E A   I
Sbjct: 138 MCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLTKSLALEWACSGI 194
Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N +APGVI  S +    +        EG   + P  R G P+EVSS+V FL  PAAS+
Sbjct: 195 RINCVAPGVIY-SQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 253
Query: 244 ITGQVICVDGGMTV 257
           ITGQ + VDGG ++
Sbjct: 254 ITGQSVDVDGGRSL 267

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW----KLKGLKVTGSVCDLS 69
           F+TGG  G+G AI   L   G  +     + +E N+ +  W    +  G        D++
Sbjct: 29  FVTGGMGGLGAAISRRLHDAGMAVAV---SHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 70  SREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
             E  E+  E V + F GK                +  T      +  T+ +++F+++K 
Sbjct: 86  DFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQ 144
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
               +     G IV I SV G   A     Y      ++  TK L  E AK  I  N+++
Sbjct: 145 FIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVS 204
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG + T++ +A+  D  + KI+     + P+ R G PDEV++L+AFLC   A ++TG  +
Sbjct: 205 PGYLATAMVEAVPQDVLEAKIL----PQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL 260
Query: 250 CVDGGM 255
            ++GGM
Sbjct: 261 AINGGM 266

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG + IG A V  LA  GA +     ++    + +++ +++G  V+  V D+++ E 
Sbjct: 17  IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTES 76
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
            +  + +V    +G+             + +A D T          N   +F   +    
Sbjct: 77  VQNAVRSVHE-QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135
Query: 133 LLKASGNGIIVFISSVAG--VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           ++     G+IV I S++G  V        Y      ++Q  + L  E A   IRAN++AP
Sbjct: 136 IMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAP 195
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
             I T+L+   R    K ++ +  ++ TP+ R G+PDEV+S+V FL   AAS +TG ++ 
Sbjct: 196 TYIETTLT---RFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVN 252
Query: 251 VDGGMTV 257
           VD G TV
Sbjct: 253 VDAGFTV 259

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RG+G A+ E LA  GA I     + + + + +QE++  G        D++S  +
Sbjct: 30  LVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESE 89
Query: 74  REKLMETVSSIF-QG---KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
              ++E  + +  QG                P   L+T A++   +  TN  S F + + 
Sbjct: 90  ---IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELET-ADWQRVI-DTNLTSAFMIGRE 144
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A   +   G G IV I S+    A      Y    G +  LT+ +  E A+  I+AN+I 
Sbjct: 145 AAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 204
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG + T ++ A+  +P  +  V+   +RTP  R G+P E+     FL   A+ Y+ GQ+I
Sbjct: 205 PGYMLTDMNQALIDNPEFDAWVK---ARTPAKRWGKPQELVGTAVFLSASASDYVNGQII 261
Query: 250 CVDGGM 255
            VDGGM
Sbjct: 262 YVDGGM 267

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            +TG TRGIG AI E+LA  G+ +     +        +E   K G+K  G   +L S E
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              K  E + ++  G                   +  ++   L+  N    F +++ +  
Sbjct: 71  SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK-VNLTGTFLVTQNSLR 129
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G IV ISSV G T       Y      +   TK L  E A  N+  N++APG 
Sbjct: 130 KMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGF 189
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+  +  K K  E    + P+ R G P+EV+++V FLC   ASYITG+VI V+
Sbjct: 190 IETDMT-AVLSEEIKQKYKE----QIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVN 244
Query: 253 GGM 255
           GGM
Sbjct: 245 GGM 247

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 4/245 (1%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG AI    A  GA I     NQ  ++  +  +K  G+   G VCD++  + 
Sbjct: 38  LVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDG 97
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + ++  + S   G                 ++ TA     +   +  + F +SK   P 
Sbjct: 98  IQAMVAQIESEV-GIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPS 156
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G+G I+ I S+           Y    G +  LTK++  E  + NI+ N I PG I
Sbjct: 157 MIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYI 216
Query: 194 RTSLSDAIRH---DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            T  +  +R    D +++   + ++++TP  R GE +++     FL   A++++ G ++ 
Sbjct: 217 ATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHILY 276
Query: 251 VDGGM 255
           VDGG+
Sbjct: 277 VDGGI 281

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 9/256 (3%)
Query: 8   SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
           S  Q  F+TG + GIG A+   LA  G  ++ C+R+   ++  +   +  G  V GS CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81
Query: 68  LSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
           ++S ++    +      F G               E  D      + +  TN   VF ++
Sbjct: 82  VTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140
Query: 128 K--LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           +  L    ++ +G G IV I+S  G         Y      +   TK +  E AK  I  
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200
Query: 186 NSIAPGVIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
           N++ PG + T +++ +R   A++      ++ E   ++ P+ R   P+EV+ LV +L   
Sbjct: 201 NAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD 260
Query: 240 AASYITGQVICVDGGM 255
           AA+ IT Q + V GG+
Sbjct: 261 AAASITAQALNVCGGL 276

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLS 69
           +N  ITGG  GIG A+    A  GA I     ++  + NE  Q  + +G+K      DLS
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS 107
Query: 70  SREQ-REKLMETVSSIFQGKXXXXXXXXXXXXPKEALD-TTAEYMSTLRSTNFESVFHLS 127
             +  ++ + ETV  +  G             P++ L+  TAE +      N  S FH++
Sbjct: 108 DEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVT 165
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K A   LK     +I+  +S+           Y    GA+   T+ L     +  IR N 
Sbjct: 166 KAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNG 223
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I T L  +   +    K V    S  P+ RPG+P E++    +L    +SY+TGQ
Sbjct: 224 VAPGPIWTPLIPSSFDE----KKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQ 279
Query: 248 VICVDGGMTVNG 259
           +I V+GG+ VNG
Sbjct: 280 MIHVNGGVIVNG 291

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 11/248 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFG---AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
           ++  +TG +RGIG +I  +LA  G   A+ +  S+ + E    ++E K KG+       +
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQAN 68
Query: 68  LSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
           ++  ++ + +++ V S F G                 +    +    +  TN + VF+  
Sbjct: 69  VADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCI 127
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           + A P +    +G I+ +SSV G    P    Y      +  LTK    E A   I  N+
Sbjct: 128 QKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNA 187
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I + ++DA+      +++ E ++++ P+ R G+  ++++ VAFL    A YITGQ
Sbjct: 188 VAPGFIVSDMTDAL-----SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQ 242
Query: 248 VICVDGGM 255
            I V+GGM
Sbjct: 243 TIHVNGGM 250

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 19  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 78
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 79  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 138 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 190
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 191 LGLELARTGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPS 250
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 251 EVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 19  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 78
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 79  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTG 137
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 138 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 190
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 191 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 250
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 251 EVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 15  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 74
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 75  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTG 133
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 134 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 186
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 187 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 246
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 247 EVAEMVAYLIGPGAAAVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 19  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 78
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 79  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 138 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGLVHAAP----YSASKHGVVGFTKA 190
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 191 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 250
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 251 EVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 15/261 (5%)
Query: 10  EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVC 66
           E+   ITG + GIG A     A  GA +    R+   L E  Q+    G+    V   V 
Sbjct: 6   EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA 65
Query: 67  DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDT-TAEYMSTLRST---NFES 122
           D+++   +++++ T    F GK            P     T TA+ + +  +T   N  S
Sbjct: 66  DVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124
Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVA-GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           V  L+K A P L +S  G IV ISS+A G+ A P  P Y     A++Q T++   +  + 
Sbjct: 125 VIALTKKAVPHL-SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH 183
Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRP----GEPDEVSSLVAFLC 237
            IR NSI+PG++ T    A+      +K     ++    C P    G+P +++ ++AFL 
Sbjct: 184 GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243
Query: 238 -FPAASYITGQVICVDGGMTV 257
               +SYI G  + VDGG ++
Sbjct: 244 DRKTSSYIIGHQLVVDGGSSL 264

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 19  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 78
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 79  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 138 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 190
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 191 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 250
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 251 EVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 15  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 74
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 75  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 133
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 134 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 186
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 187 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 246
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 247 EVAEMVAYLIGPGAAAVTAQALNVCGGL 274

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLS 69
           +N  ITGG  GIG A+    A  GA I     ++  + NE  Q  + +G+K      DLS
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS 107
Query: 70  SREQ-REKLMETVSSIFQGKXXXXXXXXXXXXPKEALD-TTAEYMSTLRSTNFESVFHLS 127
             +  ++ + ETV  +  G             P++ L+  TAE +      N  S FH++
Sbjct: 108 DEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVT 165
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K A   LK     +I+  +S+           Y    GA+   T+ L     +  IR N 
Sbjct: 166 KAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNG 223
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I T L  +   +    K V    S  P  RPG+P E++    +L    +SY+TGQ
Sbjct: 224 VAPGPIWTPLIPSSFDE----KKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQ 279
Query: 248 VICVDGGMTVNG 259
            I V+GG+ VNG
Sbjct: 280 XIHVNGGVIVNG 291

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           ITG + GIG AI E  A  GA I   +R    L+E  +  K K G++V     D+++ E 
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPK--EALDTTAEYMSTLRSTNFESVFHLSKLAH 131
            + ++E+V S F G                 EA D   ++   L   +  +   L++   
Sbjct: 72  VDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWEL---HVMAAVRLARGLV 128
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P ++A G G I+  +S+  V      P+Y     A+   +K L  E  KDNIR N I PG
Sbjct: 129 PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPG 188
Query: 192 VIRTSLSDAIRHDPAKNKIVEG---------LVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           +I T   D I+      K   G              PI R   P+E+++   FLC   A+
Sbjct: 189 LILT--PDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERAT 246
Query: 243 YITGQVICVDGGM 255
           Y  G    VDGGM
Sbjct: 247 YSVGSAYFVDGGM 259

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 23/257 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  G  CD+ S  +
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 69
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L+  V   + G                  +   E    +  TN   VF ++K    +
Sbjct: 70  IEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---QV 125
Query: 134 LKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
           LKA      G G IV I+S  G    V AAP    Y      +   TK L  E A+  I 
Sbjct: 126 LKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGIT 181
Query: 185 ANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
            N++ PG + T ++ ++R       + +  +  + + +R PI R  +P EV+ +VA+L  
Sbjct: 182 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 241
Query: 239 PAASYITGQVICVDGGM 255
           P A+ +T Q + V GG+
Sbjct: 242 PGAAAVTAQALNVCGGL 258

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 23/268 (8%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT 62
           S++   + +   +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  
Sbjct: 19  SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD 78
Query: 63  GSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFES 122
           G  CD+ S  + E L+  V   + G                  +   E    +  TN   
Sbjct: 79  GRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 123 VFHLSKLAHPLLKAS-----GNGIIVFISSVAG----VTAAPLTPLYGPYNGAMNQLTKH 173
           VF ++K    +LKA      G G IV I+S  G    V AAP    Y      +   TK 
Sbjct: 138 VFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKA 190
Query: 174 LECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPD 227
           L  E A+  I  N++ PG + T ++ ++R       + +  +  + + +R PI R  +P 
Sbjct: 191 LGLELARTGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 250
Query: 228 EVSSLVAFLCFPAASYITGQVICVDGGM 255
           EV+ +VA+L  P A+ +T Q + V GG+
Sbjct: 251 EVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 20/249 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RGIG AI  EL   GA++   + + +   +  +  K  G++  G V D+SS E 
Sbjct: 31  LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDES 90
Query: 74  REKLMETVSS-------IFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
               +E +         +                  E  D          +TN  S++ L
Sbjct: 91  VAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVV--------NTNLNSLYRL 142
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           SK     +  +  G I+ I SV G         Y      +   T+ L  E     I  N
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++APG I T   D  R  P   +  E L+ + P+ R G+ +E++ +V FL    A+Y+TG
Sbjct: 203 AVAPGFIDT---DMTRELPEAQR--EALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTG 257
Query: 247 QVICVDGGM 255
             + V+GGM
Sbjct: 258 ATVPVNGGM 266

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           ITG + GIG AI E  A  GA I   +R    L+E  +  K K G++V     D+++ E 
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPK--EALDTTAEYMSTLRSTNFESVFHLSKLAH 131
            + ++E+V S F G                 EA D   ++   L      +   L++   
Sbjct: 72  VDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVM---AAVRLARGLV 128
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P ++A G G I+  +S+  V      P+Y     A+   +K L  E  KDNIR N I PG
Sbjct: 129 PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPG 188
Query: 192 VIRTSLSDAIRHDPAKNKIVEG---------LVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           +I T   D I+      K   G              PI R   P+E+++   FLC   A+
Sbjct: 189 LILT--PDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERAT 246
Query: 243 YITGQVICVDGGM 255
           Y  G    VDGGM
Sbjct: 247 YSVGSAYFVDGGM 259

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGMALNVTNPE 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++ ++  F G                 +    E  S +  TN  S+F LSK    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G I+ + SV G         Y      +   TK +  E A   +  N++APG 
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 253 GGM 255
           GGM
Sbjct: 246 GGM 248

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGMALNVTNPE 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++ ++  F G                 +    E  S +  TN  S+F LSK    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G I+ + SV G         Y      +   TK +  E A   +  N++APG 
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGA 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 253 GGM 255
           GGM
Sbjct: 246 GGM 248

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGMALNVTNPE 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++ ++  F G                 +    E  S +  TN  S+F LSK    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G I+ + SV G         Y      +   TK +  E A   +  N++APG 
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 253 GGM 255
           GGM
Sbjct: 246 GGM 248

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGMALNVTNPE 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++ ++  F G                 +    E  S +  TN  S+F LSK    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G I+ + SV G         Y      +   TK +  E A   +  N++APG 
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 253 GGM 255
           GGM
Sbjct: 246 GGM 248

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 109/244 (44%), Gaps = 13/244 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG AI E LA  GA +I T  S N  +          KGL +  +V D +S 
Sbjct: 9   LVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPASI 66
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    ++E + + F G+                +    E  + +  TN  SVF LSK   
Sbjct: 67  ES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 122
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +    +G I+ I SV G         Y      +   +K L  E A   I  N +APG
Sbjct: 123 RAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 182
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T ++ A+  D        G++++ P  R G   E+++ VAFL    A+YITG+ + V
Sbjct: 183 FIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 252 DGGM 255
           +GGM
Sbjct: 238 NGGM 241

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ++  +TGG RGIG AI    A  G        ++  +  R  E     L V    CD++ 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAG--------DKVAITYRSGEPPEGFLAVK---CDITD 70
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            EQ E+  + +     G              +  +  + E  +++  TN    F + K A
Sbjct: 71  TEQVEQAYKEIEET-HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRA 129
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           +  +  +  G +V ISSV G+  +     Y      +    + L  E    NI  N +AP
Sbjct: 130 NRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAP 189
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G + T ++  +  +   N     +VS+ P+ R   P+E+++ V FL    ASYITG VI 
Sbjct: 190 GFVDTDMTKVLTDEQRAN-----IVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIP 244
Query: 251 VDGGM 255
           VDGG+
Sbjct: 245 VDGGL 249

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ++  +TGG RGIG AI + LA  G  +    R              KGL   G  CD++ 
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS---------GAPKGL--FGVECDVTD 64
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +  ++    V    QG                 +  T E    + + N    F +++ A
Sbjct: 65  SDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 123
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              ++ +  G ++FI SV+G         Y      +  + + +  E +K N+ AN +AP
Sbjct: 124 SRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 183
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T ++ A+       +I +G +   P  R G P EV+ +V+FL    ASYI+G VI 
Sbjct: 184 GYIDTDMTRAL-----DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 251 VDGGM 255
           VDGGM
Sbjct: 239 VDGGM 243

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 19/252 (7%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ-EWKLKGLKVTGSVCDLS 69
           +N  ITG ++GIG  I + LA  G  +    R+  E+ + L+ E + KG K      D +
Sbjct: 30  KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA 89
Query: 70  SREQREKLMETVSSIFQ--GKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
           S       +E + +I Q  G              K A+    E    +   N  S F   
Sbjct: 90  SESD---FIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGC 146
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           + A  ++  S  G +V ++S+ G         Y    G M  ++K    E A  NIR NS
Sbjct: 147 REALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNS 206
Query: 188 IAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           + PG I T    +L D ++ D  KN          P+ R G   EV+  VAFL    +SY
Sbjct: 207 VTPGFIETDMNANLKDELKADYVKN---------IPLNRLGSAKEVAEAVAFLLSDHSSY 257
Query: 244 ITGQVICVDGGM 255
           ITG+ + V+GG+
Sbjct: 258 ITGETLKVNGGL 269

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 28/251 (11%)
Query: 10  EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
           ++   +   +RGIG A+ + L+  GA +  C+RN+  L      +          VCDL 
Sbjct: 19  DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL- 68
Query: 70  SREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEAL--DTTAEYMSTLRSTNFESVFHLS 127
            R+  + L E V  +                PK     + T E       + F ++  + 
Sbjct: 69  -RKDLDLLFEKVKEV-------DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG--AMNQLTKHLECEQAKDNIRA 185
           +   P +K  G G IV I+S + ++  P+  LY   +   A+    K L  E A   I  
Sbjct: 121 RNYLPAMKEKGWGRIVAITSFSVIS--PIENLYTSNSARMALTGFLKTLSFEVAPYGITV 178
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N +APG   T     +  +  K ++     S+ P+ R  +P+E++S+VAFLC   ASY+T
Sbjct: 179 NCVAPGWTETERVKELLSEEKKKQVE----SQIPMRRMAKPEEIASVVAFLCSEKASYLT 234
Query: 246 GQVICVDGGMT 256
           GQ I VDGG++
Sbjct: 235 GQTIVVDGGLS 245

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 115/264 (43%), Gaps = 46/264 (17%)
Query: 14  FITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDL 68
            ITG +RGIG AI   LA  GF   IH   +N+ +  E  +E + +G   + V G+  +L
Sbjct: 5   LITGASRGIGRAIALRLAEDGFALAIH-YGQNREKAEEVAEEARRRGSPLVAVLGA--NL 61
Query: 69  SSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRST---------- 118
              E    L+   + +  G                 LDT        R T          
Sbjct: 62  LEAEAATALVHQAAEVLGG-----------------LDTLVNNAGITRDTLLVRMKDEDW 104
Query: 119 ------NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTK 172
                 N  +VF  ++ A  L+  +  G IV I+SV G+   P    Y      +   T+
Sbjct: 105 EAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTR 164
Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
            +  E A+  I  N++APG I T +++ +  +     + E  + + P  R G P+EV+  
Sbjct: 165 AVAKEYAQRGITVNAVAPGFIETEMTERLPQE-----VKEAYLKQIPAGRFGRPEEVAEA 219
Query: 233 VAFLCFPAASYITGQVICVDGGMT 256
           VAFL    A YITGQ +CVDGG+T
Sbjct: 220 VAFLVSEKAGYITGQTLCVDGGLT 243

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 18/265 (6%)
Query: 7   WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTG 63
           +SN +   ITG + GIG       A  GA +    R+   L E  Q     G+   +V  
Sbjct: 4   FSN-KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 64  SVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAE------YMSTLRS 117
            V D+++ + +++++ +    F GK            P +A  TT        Y  TL+ 
Sbjct: 63  VVADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLK- 119
Query: 118 TNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
            N ++V  ++K   P L AS   I+   S VAG  A P    Y     A++Q T+    +
Sbjct: 120 LNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAID 179
Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRT---PICRPGEPDEVSSLV 233
            AK  IR NS++PG++ T  ++A+   D A  K    + S     PI   G+P+ +++++
Sbjct: 180 LAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII 239
Query: 234 AFLCFPAAS-YITGQVICVDGGMTV 257
            FL     S YI GQ I  DGG ++
Sbjct: 240 LFLADRNLSFYILGQSIVADGGTSL 264

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 7/243 (2%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  RG+G A  E LA  GA +       T L E +     KG    G   D++    
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELA 72
Query: 74  REKLMETVSSIFQG-KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK-LAH 131
            E     + +  +G               K  ++   E    +  TN  S F +S+  A 
Sbjct: 73  IEAAFSKLDA--EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK 130
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            ++  +  G I+ I S+    A P    Y    G +  LT  +  E A+ NI+ N+I PG
Sbjct: 131 RMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPG 190
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T ++ A+  D   +  V+   S TP  R G P+E+     FL   A+ YI GQ+I V
Sbjct: 191 YILTDMNTALIEDKQFDSWVK---SSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYV 247
Query: 252 DGG 254
           DGG
Sbjct: 248 DGG 250

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGMALNVTNPE 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +++ ++  F G                 +    E  S +  TN  S+F LSK    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G I+ + SV G         +      +   TK +  E A   +  N++APG 
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++ A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 253 GGM 255
           GGM
Sbjct: 246 GGM 248

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 13/242 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG AI   L   G+ +     N+ +L       K      T  VC+L+++E+
Sbjct: 18  LITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN---YTIEVCNLANKEE 74
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L+   S++                   A+    +    +   N ++ F L++ A   
Sbjct: 75  CSNLISKTSNL-----DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKK 129
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +     G I+ ISS+ G+   P    Y      +  +TK L  E A   I  N++APG I
Sbjct: 130 MIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFI 189
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           ++ ++D +       K  E +V + P+   G P++V+  VAFL    ASYITGQ + V+G
Sbjct: 190 KSDMTDKLNE-----KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNG 244
Query: 254 GM 255
           GM
Sbjct: 245 GM 246

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 13/244 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG AI E LA  GA +I T  S N  +          KGL +  +V D +S 
Sbjct: 9   LVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPASI 66
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    ++E + + F G+                +    E  + +  TN  SVF LSK   
Sbjct: 67  ES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 122
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +    +G I+ I SV G         +      +   +K L  E A   I  N +APG
Sbjct: 123 RAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPG 182
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T ++ A+  D        G++++ P  R G   E+++ VAFL    A+YITG+ + V
Sbjct: 183 FIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 252 DGGM 255
           +GGM
Sbjct: 238 NGGM 241

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 17/245 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ++  +TGG RGIG AI + LA  G  +    R              KGL   G   D++ 
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS---------GAPKGL--FGVEVDVTD 84
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +  ++    V    QG                 +  T E    + + N    F +++ A
Sbjct: 85  SDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 143
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              ++ +  G ++FI+SV+G+        Y      +  + + +  E +K N+ AN +AP
Sbjct: 144 SRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 203
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T ++ A+       +I +G +   P  R G P EV+ +V+FL    ASYI+G VI 
Sbjct: 204 GYIDTDMTRAL-----DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 258
Query: 251 VDGGM 255
           VDGGM
Sbjct: 259 VDGGM 263

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 104/246 (42%), Gaps = 6/246 (2%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           NE+   +TG +RGIG  +   LA  GA +   + +Q    +     K KG K  G V ++
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNI 63
Query: 69  SSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           S  E  +     + +                       +  E+ S + +TN  S+F  SK
Sbjct: 64  SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVI-NTNLSSIFRXSK 122
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                      G I+ I SV G    P    Y      +   +K L  E A  NI  N +
Sbjct: 123 ECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVV 182
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG I T  +D +  D  K+ I     ++ P  + GEP ++++ VAFL    A YITGQ 
Sbjct: 183 APGFIATDXTDKL-TDEQKSFIA----TKIPSGQIGEPKDIAAAVAFLASEEAKYITGQT 237
Query: 249 ICVDGG 254
           + V+GG
Sbjct: 238 LHVNGG 243

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T G+G AI   L   GAI+      + +L E   E    G ++     +LS RE 
Sbjct: 11  LVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL---GERIFVFPANLSDREA 67
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEAL--DTTAEYMSTLRSTNFESVFHLSK-LA 130
            + L +       G              ++ L    + E    + + N  SVF+L++ L 
Sbjct: 68  VKALGQKAEEEMGG---VDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELT 124
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           HP+++   NG I+ I+S+ GVT  P    Y      +   +K L  E A  N+  N IAP
Sbjct: 125 HPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAP 183
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I ++++  +       K  + ++   P+ R G   ++++ V +L    A+Y+TGQ + 
Sbjct: 184 GFIESAMTGKLNE-----KQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLH 238
Query: 251 VDGGMTV 257
           V+GGM +
Sbjct: 239 VNGGMAM 245

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           ++  +TGG RGIG AI + LA  G  +    R              KGL   G   D++ 
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS---------GAPKGL--FGVEVDVTD 64
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            +  ++    V    QG                 +  T E    + + N    F +++ A
Sbjct: 65  SDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 123
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              ++ +  G ++FI SV+G+        Y      +  + + +  E +K N+ AN +AP
Sbjct: 124 SRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 183
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T ++ A+       +I +G +   P  R G P EV+ +V+FL    ASYI+G VI 
Sbjct: 184 GYIDTDMTRAL-----DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 251 VDGGM 255
           VDGGM
Sbjct: 239 VDGGM 243

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T G+G AI   L   GAI+      + +L E   E    G ++     +LS RE 
Sbjct: 14  LVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL---GERIFVFPANLSDREA 70
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEAL--DTTAEYMSTLRSTNFESVFHLSK-LA 130
            + L +       G              ++ L    + E    + + N  SVF+L++ L 
Sbjct: 71  VKALGQKAEEEMGG---VDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELT 127
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           HP+++   NG I+ I+S+ GVT  P    Y      +   +K L  E A  N+  N IAP
Sbjct: 128 HPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAP 186
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I ++++  +       K  + ++   P+ R G   ++++ V +L    A+Y+TGQ + 
Sbjct: 187 GFIESAMTGKLNE-----KQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLH 241
Query: 251 VDGGMTV 257
           V+GGM +
Sbjct: 242 VNGGMAM 248

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 22/253 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+RGIG  I + L   GA +  C+R+     +        G        DLSS   
Sbjct: 33  LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAG 91
Query: 74  REKLMETVS------SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
             +L + +        I                P    +   +        N  SVF   
Sbjct: 92  ARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQL-------NVTSVFSCI 144
Query: 128 KLAHPLLKASGNG----IIVFISSVAGVTA-APLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           +   PLL+ S +      ++ I SVAG++A       YGP   A++QL++ L  E   ++
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEH 204
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N IAPG   + ++  I +DP   + +E   +  P+ R G P+E+++L   L   A +
Sbjct: 205 INVNVIAPGRFPSRMTRHIANDP---QALEADSASIPMGRWGRPEEMAALAISLAGTAGA 261
Query: 243 YITGQVICVDGGM 255
           Y+TG VI +DGG 
Sbjct: 262 YMTGNVIPIDGGF 274

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 3/245 (1%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG AI ++ A   +I+      +  LN+ +QE +  G +V G   D+S ++ 
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKD 70
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+ +      +                    + + E    + + N  S F+ S+   P+
Sbjct: 71  VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPI 130
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G G+IV  +S+AG+        Y      +  LT+ +        IRA ++ PG +
Sbjct: 131 MLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTV 190
Query: 194 RTSLS-DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           +T++   + +      + +  L+S +   R  EP+++++++ FL    AS++ G  + VD
Sbjct: 191 KTNIGLGSSKPSELGMRTLTKLMSLS--SRLAEPEDIANVIVFLASDEASFVNGDAVVVD 248
Query: 253 GGMTV 257
           GG+TV
Sbjct: 249 GGLTV 253

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 10/247 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLS 69
           ++  +TGGT+GIG  I    A  GA +    R+  +++  + +  +L   KV G   D+S
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS 70
Query: 70  SREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDT-TAEYMSTLRSTNFESVFHLSK 128
            R Q + L       F G             P   L T T E ++ + + N    F+  +
Sbjct: 71  DRAQCDALAGRAVEEFGG--IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ 128
Query: 129 LAHPLLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
                L ASG+G +V  SS+ G +T  P    YG    A     +    E A   I  N+
Sbjct: 129 ACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNA 188
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I PG I   +++ +  +    + +  +    P    G P+++  L AFL    A YITGQ
Sbjct: 189 IMPGNI---MTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQ 243
Query: 248 VICVDGG 254
            I VDGG
Sbjct: 244 AIAVDGG 250

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N   VF   K   P +K +G G IV ISS AG+    LT  YG     +  L+K    E 
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169
Query: 179 AKDNIRANSIAPGVIRTSLS--DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
             D IR NS+ PG+  T ++    IR         EG    TP+ R GEP E++  V  L
Sbjct: 170 GTDRIRVNSVHPGMTYTPMTAETGIRQG-------EGNYPNTPMGRVGEPGEIAGAVVKL 222
Query: 237 CFPAASYITGQVICVDGGMTVN 258
               +SY+TG  + VDGG T  
Sbjct: 223 LSDTSSYVTGAELAVDGGWTTG 244

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 12/250 (4%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCD 67
           + ++  +TGGT+GIG  I    A  GA +   +R+  EL+    E  +L    V G   D
Sbjct: 40  SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLD 99
Query: 68  LSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDT-TAEYMSTLRSTNFESVFHL 126
           +S          TV   F               P+  LDT T E +S +   N +   + 
Sbjct: 100 VSDPGSCADAARTVVDAF--GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYT 157
Query: 127 SKLAHPLLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
            +     L ASG G ++  SS+ G VT  P    YG    A     +    E A   +  
Sbjct: 158 VQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTV 217
Query: 186 NSIAPGVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           N+I PG I T  L D         + + G+    P+   G P ++  L AFL    A YI
Sbjct: 218 NAILPGNILTEGLVDM------GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYI 271
Query: 245 TGQVICVDGG 254
           TGQ I VDGG
Sbjct: 272 TGQAIVVDGG 281

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 98/245 (40%), Gaps = 9/245 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A  E LA  GA +     N        ++    G        D+S  E  
Sbjct: 14  VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESA 73
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEA--LDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           + + +   + F G              K    L    EY     S N +     ++  + 
Sbjct: 74  KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +   G G IV  SS A   A   +  YG     +N LT+ L  E    NIR N+IAPG 
Sbjct: 134 KMTKRGGGAIVNQSSTA---AWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGP 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T  +         + IV+GL    P+ R G PD++  +  FL    AS+ITGQ+  VD
Sbjct: 191 IDTEANRTTTPKEMVDDIVKGL----PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVD 246
Query: 253 GGMTV 257
           GG  +
Sbjct: 247 GGQII 251

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG + G+G ++    A   A +    R+ + E N  L+E K  G +      D++    
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L+++    F GK            P  + + +    + +  TN    F  S+ A   
Sbjct: 72  VINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV      PL   Y    G M  +TK L  E A   IR N+I PG 
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGA 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++     DP +   VE ++   P+   GEP+E++++ A+L    ASY+TG  +  D
Sbjct: 191 INTPINAEKFADPEQRADVESMI---PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Query: 253 GGMTV 257
           GGMT+
Sbjct: 248 GGMTL 252

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 9/252 (3%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           N++   +TGG  GIG A  E  A  GA +     N+        E    G K  G   D+
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDV 82
Query: 69  SSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           SS +  E  +E  ++ + G+                +    E    + S N + +F  SK
Sbjct: 83  SSAKDAESXVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSK 141
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
              P+ + +G G I+  +S    +A      Y    GA++ LT+    + AK+ IR N++
Sbjct: 142 YVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAV 201
Query: 189 APGVIRTSLSDAI---RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           APG I +     I     DPA  K+     +R    R G  +E++    FL    + + T
Sbjct: 202 APGTIDSPYFTKIFAEAKDPA--KLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFAT 259
Query: 246 GQVICVDGGMTV 257
           G ++ VDGG ++
Sbjct: 260 GSILTVDGGSSI 271

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 11/244 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFG---AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
            +TG +RGIG +I  +LA  G   A+ +  S+ + E    ++E K KG+       +++ 
Sbjct: 8   LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEA--VVEEIKAKGVDSFAIQANVAD 65
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            ++ +  ++ V S F G                      +    +  TN + VF+  + A
Sbjct: 66  ADEVKAXIKEVVSQF-GSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKA 124
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P      +G I+ +SSV G    P    Y      +  LTK    E A   I  N++AP
Sbjct: 125 TPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAP 184
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I +  +DA+      +++ E  +++ P+ R G+  ++++ VAFL    A YITGQ I 
Sbjct: 185 GFIVSDXTDAL-----SDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIH 239
Query: 251 VDGG 254
           V+GG
Sbjct: 240 VNGG 243

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI E LA  GA +I T +       + + ++   G    G   ++++ E
Sbjct: 13  LVTGASRGIGKAIAELLAERGAKVIGTATSESGA--QAISDYL--GDNGKGXALNVTNPE 68
Query: 73  QREKLMETVSSIFQG-----KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
             E +++ ++  F G                   KE      E  S +  TN  S+F LS
Sbjct: 69  SIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKE------EEWSDIXETNLTSIFRLS 122
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K           G I+ + SV G         Y      +   TK    E A   +  N+
Sbjct: 123 KAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNT 182
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I T  + A+ +D  +   +    ++ P  R G+P E++S VAFL  P A+YITG+
Sbjct: 183 VAPGFIETDXTKAL-NDEQRTATL----AQVPAGRLGDPREIASAVAFLASPEAAYITGE 237
Query: 248 VICVDGG 254
            + V+GG
Sbjct: 238 TLHVNGG 244

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 15/253 (5%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSRE 72
           +TGG++GIG AI   L   GA +        +L+    +  + GL+  G     D++ R 
Sbjct: 17  VTGGSKGIGAAIARALDKAGATVAIA-----DLDVMAAQAVVAGLENGGFAVEVDVTKRA 71
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-H 131
             +  M+       G              + A+D T E        N   VF  +++A  
Sbjct: 72  SVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR 130
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             L ++  G+IV  +S+A    APL   Y     A+   T+ L  E A  NIR N + PG
Sbjct: 131 HFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPG 190
Query: 192 VIRTSLSDA--IRHDPAKNKIVEGL----VSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
            ++T++ +   I     +    E +    VS TP+ R  EP++V+ +V FL   AA ++T
Sbjct: 191 FVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMT 250
Query: 246 GQVICVDGGMTVN 258
           GQ I V GG+ ++
Sbjct: 251 GQGINVTGGVRMD 263

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG + G+G ++    A   A +    R+ + E N  L+E K  G +      D++    
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L+++    F GK            P  + + +    + +  TN    F  S+ A   
Sbjct: 72  VINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV      PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++     DP +   VE ++   P+   GEP+E++++ A+L    ASY+TG  +  D
Sbjct: 191 INTPINAEKFADPEQRADVESMI---PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Query: 253 GGMTV 257
           GGMT+
Sbjct: 248 GGMTL 252

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG + G+G ++    A   A +    R+ + E N  L+E K  G +      D++    
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L+++    F GK            P  + + +    + +  TN    F  S+ A   
Sbjct: 72  VINLVQSAIKEF-GKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV      PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++     DP +   VE ++   P+   GEP+E++++ A+L    ASY+TG  +  D
Sbjct: 191 INTPINAEKFADPEQRADVESMI---PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Query: 253 GGMT 256
           GGMT
Sbjct: 248 GGMT 251

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 6/244 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITGG+ G+G A+        A ++     N+ E  +  +E +  G +      D++  E 
Sbjct: 20  ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEED 79
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L++T    F G             P  + + + +  + +  TN    F  S+ A   
Sbjct: 80  VVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV  +   PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 198
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T ++     DP +   VE ++   P+   G+P+EV+++ AFL    ASY+TG  +  D
Sbjct: 199 MNTPINAEKFADPVQRADVESMI---PMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Query: 253 GGMT 256
           GGMT
Sbjct: 256 GGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 6/244 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITGG+ G+G A+        A ++     N+ E  +  +E +  G +      D++  E 
Sbjct: 20  ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEED 79
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L++T    F G             P  + + + +  + +  TN    F  S+ A   
Sbjct: 80  VVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV  +   PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 198
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T ++     DP +   VE ++   P+   G+P+EV+++ AFL    ASY+TG  +  D
Sbjct: 199 MNTPINAEKFADPVQRADVESMI---PMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Query: 253 GGMT 256
           GGMT
Sbjct: 256 GGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 6/244 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITGG+ G+G A+        A ++     N+ E  +  +E +  G +      D++  E 
Sbjct: 20  ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEED 79
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L++T    F G             P  + + + +  + +  TN    F  S+ A   
Sbjct: 80  VVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV  +   PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 198
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T ++     DP +   VE ++   P+   G+P+EV+++ AFL    ASY+TG  +  D
Sbjct: 199 MNTPINAEKFADPVQRADVESMI---PMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Query: 253 GGMT 256
           GGMT
Sbjct: 256 GGMT 259

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG + G+G ++    A   A +    R+ + E N  L+E K  G +      D++    
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HP 132
              L+++    F GK            P  + + +    + +  TN    F  S+ A   
Sbjct: 72  VINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV      PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++     DP +   VE ++   P+   GEP+E++++ A+L    ASY+TG  +  D
Sbjct: 191 INTPINAEKFADPEQRADVESMI---PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Query: 253 GGMT 256
           GGMT
Sbjct: 248 GGMT 251

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 17/268 (6%)
Query: 3   SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL--- 59
           S++   + ++  ITG + GIG +     A  GA +    RN+  L E  Q+    G+   
Sbjct: 19  SHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAE 78
Query: 60  KVTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAE---YMSTLR 116
           K+   V D++    ++ ++ T  + F GK                 +T      Y  T +
Sbjct: 79  KINAVVADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFK 137
Query: 117 STNFESVFHLS-KLAHPLLKASGNGIIVFISS-VAGVTAAPLTPLYGPYNGAMNQLTKHL 174
             NF++V  ++ K    L+K  G   IV +SS VAG  A    P Y     A++Q T+  
Sbjct: 138 -LNFQAVIEMTQKTKEHLIKTKGE--IVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 194
Query: 175 ECEQAKDNIRANSIAPGVIRTSLSDAIR-HDPAKNKIVEGLVSRT---PICRPGEPDEVS 230
             +  +  +R NS++PG + T    A+   + A +K+   + SR    P+   G+P+E++
Sbjct: 195 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 254
Query: 231 SLVAFLCFPA-ASYITGQVICVDGGMTV 257
           +++ FL     +SYI GQ I  DGG T+
Sbjct: 255 NIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 14/248 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG  +    A  GA +   +R+   L     E    G K     CD++  +Q
Sbjct: 36  LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQ 95
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +++ ++    G              +  LD   E    ++ TN   VF  ++ A   
Sbjct: 96  VRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154
Query: 134 LKASG-NGIIVFISSVAG--VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           +   G  G I+  +S++G  +        Y     A+  LTK +  E A   IR NS++P
Sbjct: 155 MVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP 214
Query: 191 GVIRTSLSD--AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           G IRT L +  A  H   + KI        P+ R G P+E++ L  +L   A+SY+TG  
Sbjct: 215 GYIRTELVEPLADYHALWEPKI--------PLGRMGRPEELTGLYLYLASAASSYMTGSD 266
Query: 249 ICVDGGMT 256
           I +DGG T
Sbjct: 267 IVIDGGYT 274

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 19/249 (7%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLS 69
           +   +TG  +GIG   V+ L   GA +   SR Q +L+  ++E    G++    VC DL 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLG 62
Query: 70  SREQREKLMETVS--SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
             E  E+ + +V    +                 KEA D + E        N  +V  +S
Sbjct: 63  DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEV-------NLRAVIQVS 115
Query: 128 KLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++    L A G  G IV +SS     A     +Y    GA++ LTK +  E     IR N
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++ P V+ TS+  A   DP K K    +++R P+ +  E + V + + FL    +   TG
Sbjct: 176 AVNPTVVMTSMGQATWSDPHKAKT---MLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232
Query: 247 QVICVDGGM 255
             + V+GG 
Sbjct: 233 STLPVEGGF 241

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 19/249 (7%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLS 69
           +   +TG  +GIG   V+ L   GA +   SR Q +L+  ++E    G++    VC DL 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLG 62
Query: 70  SREQREKLMETVS--SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLS 127
             E  E+ + +V    +                 KEA D + E        N  +V  +S
Sbjct: 63  DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEV-------NLRAVIQVS 115
Query: 128 KLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++    L A G  G IV +SS     A     +Y    GA++ LTK +  E     IR N
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++ P V+ TS+  A   DP K K    +++R P+ +  E + V + + FL    +   TG
Sbjct: 176 AVNPTVVMTSMGQATWSDPHKAKT---MLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232
Query: 247 QVICVDGGM 255
             + V+GG 
Sbjct: 233 STLPVEGGF 241

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 103/244 (42%), Gaps = 10/244 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG      LA  GA +      +T+L          G      V DL++   
Sbjct: 15  IITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVS 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDT--TAEYMSTLRSTNFESVFHLSKLAH 131
              L++     F G+            P + L T  T +      + N      + K A 
Sbjct: 72  VRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI 130
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P L ++G G IV ISS     A  ++  Y     A+  LT+++  +  +  +R N+IAPG
Sbjct: 131 PRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPG 190
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           ++RT   +     P    IV+   +     R GEP E++ LV FL    A++ITGQVI  
Sbjct: 191 LVRTPRLEVGLPQP----IVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAA 246
Query: 252 DGGM 255
           D G+
Sbjct: 247 DSGL 250

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 11/246 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIH-TCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI  ELA  GA +    + +    +E +      G +      D+S   
Sbjct: 32  LVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQES 91
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           + E L   V   + G+                L    +   ++   N   VF  S+ A  
Sbjct: 92  EVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAK 150
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++    +G I+ I+SV G    P    Y      +  LTK +  E A   I  N++APG 
Sbjct: 151 IMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGF 210
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVICV 251
           I T ++     + A  K++E +    P+ R GE  EV+ +V FL   PAA+YITGQVI +
Sbjct: 211 IATDMT----SELAAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINI 262
Query: 252 DGGMTV 257
           DGG+ +
Sbjct: 263 DGGLVM 268

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N   VF   K   P +K +G G IV ISS AG+    LT  YG     +  L+K    E 
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169
Query: 179 AKDNIRANSIAPGVIRTSLS--DAIRHDPAKNKIVEGLVSRTPICRPG-EPDEVSSLVAF 235
             D IR NS+ PG+  T ++    IR         EG    TP+ R G EP E++  V  
Sbjct: 170 GTDRIRVNSVHPGMTYTPMTAETGIRQG-------EGNYPNTPMGRVGNEPGEIAGAVVK 222
Query: 236 LCFPAASYITGQVICVDGGMT 256
           L    +SY+TG  + VDGG T
Sbjct: 223 LLSDTSSYVTGAELAVDGGWT 243

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 14  FITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           ++TGG  GIG +I + L   GF  ++  C  N     + L++ K  G     S  ++   
Sbjct: 17  YVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW 75
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  ++  + V +   G+                   T E    +  TN  S+F+++K   
Sbjct: 76  DSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +   G G I+ ISSV G         Y      ++  T  L  E A   +  N+++PG
Sbjct: 135 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T +  AIR D     ++E +V+  P+ R G PDE+ S+VA+L    + + TG    +
Sbjct: 195 YIGTDMVKAIRPD-----VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSL 249
Query: 252 DGGM 255
           +GG+
Sbjct: 250 NGGL 253

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 12  NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSS 70
           NY +TGG++GIG A+VE L          ++N T +N  +Q+ +  + LK   +  DL+ 
Sbjct: 6   NYLVTGGSKGIGKAVVELL--------LQNKNHTVINIDIQQSFSAENLKFIKA--DLTK 55
Query: 71  REQREKLMETVSSI-FQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
           ++    +++ + ++ F G                  D   E +  +   N  S  +  K 
Sbjct: 56  QQDITNVLDIIKNVSFDG----IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKG 111
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
               LK   +  IVF  S     A P +  Y    GA+ Q TK L  + AK  IR N++ 
Sbjct: 112 LENNLKVGAS--IVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVC 169
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRT------PICRPGEPDEVSSLVAFLCFPAASY 243
           PG + T L   +    A N  +    ++       P+ R  +P E++ LV FL    + +
Sbjct: 170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF 229
Query: 244 ITGQVICVDGGMT 256
            TG +I +DGG T
Sbjct: 230 XTGGLIPIDGGYT 242

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 8/241 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG   GIG AI    A  GA  H  +  +T+ + E   E    G      V DL+  E 
Sbjct: 36  VTGAGSGIGRAIAHGYARAGA--HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEG 93
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              + E +++  +              P E + +   +   L + N ++ + LS+     
Sbjct: 94  AANVAEELAATRRVDVLVNNAGIIARAPAEEV-SLGRWREVL-TVNLDAAWVLSRSFGTA 151
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           + A G+G IV I+S+           Y     A+  LT+ L  E A   +  N++APG +
Sbjct: 152 MLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYV 211
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T+ + A+R D    +  E + +R P  R   P+++     FL   AASY+ GQV+ VDG
Sbjct: 212 VTANTAALRAD--DERAAE-ITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDG 268
Query: 254 G 254
           G
Sbjct: 269 G 269

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 10  EQN--YFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           EQN    +TG +RG+G A    LA  G+  +I+     +  L E  +E +  G+KV    
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAAL-ETAEEIEKLGVKVLVVK 60
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
            ++    + +++ + +   F G+             +  ++    +     + N +++  
Sbjct: 61  ANVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLF 119
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
            ++ A  L++ +G G IV ISS+  +         G    A+  LT++L  E +   I  
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+++ G I T   DA++H P +  ++E     TP  R  E  ++   V FL    A  I 
Sbjct: 180 NAVSGGAIDT---DALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIR 236
Query: 246 GQVICVDGGMTV 257
           GQ I VDGG ++
Sbjct: 237 GQTIIVDGGRSL 248

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 14/248 (5%)
Query: 15  ITGGTRGIGHAIVEELAGFGAII----HTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +TG +RGIG AI   L   G  +       ++   E++++++ +  + +   G   D+S 
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG---DVSK 62
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
               E +M+T    + G                 +         +   N   VF  ++ A
Sbjct: 63  EADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             ++     G I+ I+SV G+        Y      +   +K    E A  NI  N + P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181
Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVI 249
           G I + ++  +  D  K      ++   P+ R G+P+ V+ LV FL   PAASYITGQ  
Sbjct: 182 GFIASDMTAKLGEDMEKK-----ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAF 236
Query: 250 CVDGGMTV 257
            +DGG+ +
Sbjct: 237 TIDGGIAI 244

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGGT GIG AI  +    GA +    R  +++ E+  +      ++     D S  +  
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITDR-HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGW 69
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
            KL +     F G              K   +TT      L + N + VF  ++L    +
Sbjct: 70  TKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRM 128
Query: 135 KASGNGI-IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRANSIAPG 191
           K  G G  I+ +SS+ G    P    Y    GA+  ++K   L+C     ++R N++ PG
Sbjct: 129 KNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG 188
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I+T L D +   P   + +    ++TP+   GEP++++ +  +L    + + TG    V
Sbjct: 189 YIKTPLVDDL---PGAEEAMS-QRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV 244
Query: 252 DGGMTV 257
           DGG T 
Sbjct: 245 DGGYTA 250

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 17/251 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           ++  +TG ++GIG AI  +LA  GF   +H   R+     E L      G        D+
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHY-HRDAAGAQETLNAIVANGGNGRLLSFDV 85
Query: 69  SSREQ-REKLMETVS--SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
           ++REQ RE L   ++    + G             P  + D        +  TN +S ++
Sbjct: 86  ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDD----WDAVIHTNLDSFYN 141
Query: 126 -LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
            +     P++ A   G I+ +SSV+GV        Y      +   TK L  E AK  I 
Sbjct: 142 VIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKIT 201
Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N IAPG+I T + +       +   ++  +S  P+ R G+ +EV+ L ++L    A Y+
Sbjct: 202 VNCIAPGLIDTGMIEM------EESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYV 255
Query: 245 TGQVICVDGGM 255
           T QVI ++GGM
Sbjct: 256 TRQVISINGGM 266

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGGT GIG AI  +    GA +    R  +++ E+  +      ++     D S  +  
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGW 69
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
            KL +     F G              K   +TT      L + N + VF  ++L    +
Sbjct: 70  TKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRM 128
Query: 135 KASGNGI-IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRANSIAPG 191
           K  G G  I+ +SS+ G    P    Y    GA+  ++K   L+C     ++R N++ PG
Sbjct: 129 KNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG 188
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I+T L D +   P   + +    ++TP+   GEP++++ +  +L    + + TG    V
Sbjct: 189 YIKTPLVDDL---PGAEEAMS-QRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV 244
Query: 252 DGGMTV 257
           DGG T 
Sbjct: 245 DGGYTA 250

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 102/249 (40%), Gaps = 10/249 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG A    LA  G  +    R +TE+ E   E    G +      D+S   Q
Sbjct: 32  LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQ 91
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTA--EYMSTLRSTNFESVFHLSKLAH 131
               +  +   F G                 +D     E+  T+ + N    F    L  
Sbjct: 92  XRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETI-AVNLRGTFLTLHLTV 149
Query: 132 PLLKASGNGIIVFISSVAGVTA--APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           P LK  G G IV +SS+ G      P    Y     A   + + L  E  K +IR N++ 
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209
Query: 190 PGVIRTSLSD--AIRHDPAKNKIVEGLVSRTPIC--RPGEPDEVSSLVAFLCFPAASYIT 245
           PG I T++SD   +RH+      VE    + PI   +PG  ++V+ L+ FL    A ++T
Sbjct: 210 PGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVT 269
Query: 246 GQVICVDGG 254
           G  + +DGG
Sbjct: 270 GSPVWIDGG 278

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 119 NFESVFHLSK-LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
           N +++F  ++  A  LL    +G +V I+S+         P Y      +  LTK L  E
Sbjct: 110 NLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANE 169
Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
            A   I  N+IAPG I T+ ++A+R D A+NK +   + R P  R G  ++++    FL 
Sbjct: 170 WAAKGINVNAIAPGYIETNNTEALRADAARNKAI---LERIPAGRWGHSEDIAGAAVFLS 226
Query: 238 FPAASYITGQVICVDGG 254
             AA Y+ G ++ VDGG
Sbjct: 227 SAAADYVHGAILNVDGG 243

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 13/247 (5%)
Query: 15  ITGGTRGIGHAIVEELAGFGAI--IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG +RGIG AI + LA  GA+  IH  +R + E  E + E +  G        +L S  
Sbjct: 12  VTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLESLH 70
Query: 73  QREKLMETVSSIFQGKXXXXX----XXXXXXXPKEALD-TTAEYMSTLRSTNFESVFHLS 127
             E L  ++ +  Q +                P   ++ TT ++     S N ++ F + 
Sbjct: 71  GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFI- 129
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            +   L +   N  I+ ISS A   + P    Y    GA+N  T  L  +     I  N+
Sbjct: 130 -IQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNA 188
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I PG ++T  +  +  DP   +    +   +   R GE ++++   AFL  P + ++TGQ
Sbjct: 189 ILPGFVKTDXNAELLSDPXXKQYATTI---SAFNRLGEVEDIADTAAFLASPDSRWVTGQ 245
Query: 248 VICVDGG 254
           +I V GG
Sbjct: 246 LIDVSGG 252

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKV-------TGSVC 66
            +TG   GIG A+   LAG GA +  C  ++    E ++     G K             
Sbjct: 11  LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQA 70
Query: 67  DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+S       L+E V + F                +  L  + +    + + N +  F +
Sbjct: 71  DVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLV 130
Query: 127 SKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           ++ A   L ++G  G I+ ISS+ G         Y      +  LT+    E  +  IR 
Sbjct: 131 TQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 190
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           NS+ PG I T ++  +       K+V+ +    P+   G+P++V+ +VAFL    + YIT
Sbjct: 191 NSVLPGFIATPMTQKV-----PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYIT 245
Query: 246 GQVICVDGGM 255
           G  + V GG+
Sbjct: 246 GTSVEVTGGL 255

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 107/244 (43%), Gaps = 28/244 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG AI E LA  GA +I T  S N  +          KGL +  +V D +S 
Sbjct: 9   LVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPASI 66
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    ++E + + F G+                +    E  + +  TN  SVF LSK   
Sbjct: 67  ES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 122
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +    +G I+ I   A   AA    L G         +K L  E A   I  N +APG
Sbjct: 123 RAMMKKRHGRIITIGGQANYAAAK-AGLIG--------FSKSLAREVASRGITVNVVAPG 173
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I TS  D  R          G++++ P  R G   E+++ VAFL    A+YITG+ + V
Sbjct: 174 FIETS--DDQRA---------GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 222
Query: 252 DGGM 255
           +GGM
Sbjct: 223 NGGM 226

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           FITGG  GIG  I E     G   HT   +++         KL G   TG  C   S + 
Sbjct: 31  FITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAG--ATGRRCLPLSMDV 86
Query: 74  RE--KLMETVSSIFQ--GKXXXXXXXXXXXX--PKEALDTTAEYMSTLRSTNFESVFHLS 127
           R    +M  V    +  G+              P  AL   A    T+   +    F++S
Sbjct: 87  RAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNA--FKTVMDIDTSGTFNVS 144
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           ++ +        G+IV I++  G     L    G    A++ +T+HL  E    NIR NS
Sbjct: 145 RVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNS 204
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +APG I  S ++ +R        +   V+ +P+ R G   E++  V +L  P ASY+TG 
Sbjct: 205 LAPGPI--SGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGA 262
Query: 248 VICVDGG 254
           V+  DGG
Sbjct: 263 VLVADGG 269

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 96/247 (38%), Gaps = 8/247 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG A     A  GA +   +RN   L E   E    G +      D+      
Sbjct: 13  VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALH 72
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E L+E     F G               E    + E       TN  S F  +K   P +
Sbjct: 73  EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132
Query: 135 KASGNGIIVFISSVAGVTA--APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            A G G + F SS  G TA  A + P Y      +  L + L  E     IR N++ PG 
Sbjct: 133 AALGGGSLTFTSSFVGHTAGFAGVAP-YAASKAGLIGLVQALAVELGARGIRVNALLPGG 191
Query: 193 IRT--SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
             T  + ++     P     VEGL +   I RP   +E++    +L    AS++TG  + 
Sbjct: 192 TDTPANFANLPGAAPETRGFVEGLHALKRIARP---EEIAEAALYLASDGASFVTGAALL 248
Query: 251 VDGGMTV 257
            DGG +V
Sbjct: 249 ADGGASV 255

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 19/255 (7%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK------VTGSVCD 67
            ITGG  G+G A    LA  GA +     +    +E L+  K   L+      V  +V D
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVS----SEGLEASKAAVLETAPDAEVLTTVAD 72
Query: 68  LSSREQREKLMETVSSIFQGKXX---XXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVF 124
           +S   Q E  +   +  F G+               P E+  T AE+   + S N   VF
Sbjct: 73  VSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESF-TAAEFDKVV-SINLRGVF 129
Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
              +    +++  G+G++V  +SV G+        Y      +  LT++   E  +  IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 185 ANSIAPGVIRTSL-SDAIRH-DPAK-NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
            N+IAPG I T +  ++++  DP    K  E  +   P  R GE  E++++VAFL    A
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249
Query: 242 SYITGQVICVDGGMT 256
           SY+   V+ +DGG +
Sbjct: 250 SYVNATVVPIDGGQS 264

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG    IG A    LA  G  I     N+  L +     + KG++    VCD++S E 
Sbjct: 11  LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA 70
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
               +++V   F                    D  ++  + + + N    FH+ K     
Sbjct: 71  VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQ 130
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +     G IV  +S+AGV   P    YG   GA+  LT+    + A  NIR N+I+PG +
Sbjct: 131 MITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYM 190
Query: 194 RTSL-------------SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
                            S     DP    + + ++   P+ R G+ +E+  +VAFL    
Sbjct: 191 GPGFMWERQVELQAKVGSQYFSTDP--KVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDD 248
Query: 241 ASYITGQVICVDGG 254
           +S++TG  + + GG
Sbjct: 249 SSFMTGVNLPIAGG 262

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAII-----HTCSRNQTELNERLQEWKLKGLKVTGSV 65
           +  F+TGG+RGIG AI + LA  GA +     +   R Q  ++E +++   + + +    
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE-IEQAGGRAVAIRADN 90
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
            D  + EQ   + ETV ++                P E  +TT      + + NF + F 
Sbjct: 91  RDAEAIEQ--AIRETVEALGGLDILVNSAGIWHSAPLE--ETTVADFDEVXAVNFRAPFV 146
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             + A   L   G  II   S++A +   P   LY     A+  LTK L  +     I  
Sbjct: 147 AIRSASRHLGDGGR-IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITV 205
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N + PG   T        +PA     E    R      GEP +++ LVA+L  P   ++T
Sbjct: 206 NIVHPGSTDTDX------NPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVT 259
Query: 246 GQVICVDGG 254
           G  + +DGG
Sbjct: 260 GASLTIDGG 268

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
            IT GT+G+G  + E+L   G  +     + T   E ++E +K    ++     D++ +E
Sbjct: 11  LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKE 70
Query: 73  QREKLMETVSSIFQGKXXXXXXXX--XXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
              K++E   S F GK               K+ +D   +  + +   N  +VFHL KL 
Sbjct: 71  DLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV 129
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANS 187
            P+++    G I+      G  +AP       +  A   +  LTK +  E+A+  I AN 
Sbjct: 130 VPVMRKQNFGRIINYG-FQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANM 188
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           + PG I   + +A   +  + K        TPI R G  ++++  ++FLC   +  ITG 
Sbjct: 189 VCPGDIIGEMKEATIQEARQLK-----EHNTPIGRSGTGEDIARTISFLCEDDSDMITGT 243
Query: 248 VICVDGGMTV 257
           +I V G + V
Sbjct: 244 IIEVTGAVDV 253

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N     ++ K A   +   G G  V ISS+A          YG    A++ L +    E 
Sbjct: 123 NVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADEL 182
Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
               +R NSI PG+IRT L  AI       ++       TP+ R GE ++V+++  FL  
Sbjct: 183 GASWVRVNSIRPGLIRTDLVAAITESA---ELSSDYAMCTPLPRQGEVEDVANMAMFLLS 239
Query: 239 PAASYITGQVICVDGG 254
            AAS++TGQVI VDGG
Sbjct: 240 DAASFVTGQVINVDGG 255

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLSSRE 72
            +TG  +GIG   V+ L   GA +   +R  ++L    +E    G++    VC DL   +
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIE---PVCVDLGDWD 65
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL-AH 131
             EK +  +     G              +  L+ T E      S N  SVF +S++ A 
Sbjct: 66  ATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            ++     G IV +SS+      P    Y    GAM  LTK +  E     IR NS+ P 
Sbjct: 121 DMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPT 180
Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           V+ T +   +  DP   +    L  R P+ +  E ++V + + FL    ++  +G  I V
Sbjct: 181 VVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILV 237
Query: 252 DGG 254
           D G
Sbjct: 238 DAG 240

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 98/251 (39%), Gaps = 11/251 (4%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   +TG T GIG  I + LA  GA I        +    L E    G+K      DLS 
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANI--VLNGFGDPAPALAEIARHGVKAVHHPADLSD 62
Query: 71  REQREKLMETVSSIFQG-KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
             Q E L       F G              P E      E    + + N  +VFH ++L
Sbjct: 63  VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPL--ESWDKIIALNLSAVFHGTRL 120
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A P ++A   G I+ I+SV G+  +     Y      +  LTK +  E A  N+  N+I 
Sbjct: 121 ALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAIC 180
Query: 190 PGVIRTSLSDAIRHDPAKNKIV------EGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           PG + T L      D A N         + L  + P      P+ +  LV FLC  A S 
Sbjct: 181 PGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQ 240
Query: 244 ITGQVICVDGG 254
           + G    VDGG
Sbjct: 241 VRGAAWNVDGG 251

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 24/264 (9%)
Query: 14  FITGGTRGIGHAIVEELAGFGA---IIHTCSRNQT---------ELNERLQEWKLKGLKV 61
           FITG  RG G      LA  GA    I  C +            EL E ++  + +G ++
Sbjct: 50  FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRI 109
Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFE 121
                D+      + +++   + F G               E +  T +  S +  TN  
Sbjct: 110 IARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168
Query: 122 SVFHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
             +H  +   P +++    G ++F+SS  G+  AP    Y      +  L   L  E  +
Sbjct: 169 GAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGR 228
Query: 181 DNIRANSIAPGVIRTSLSDAIR---------HDPAKNKIVEGLVSRTPICRPG-EPDEVS 230
            NIR NS+ PG + T ++   +          +P +    E     T +  P  EP++VS
Sbjct: 229 HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVS 288
Query: 231 SLVAFLCFPAASYITGQVICVDGG 254
           + VA+L    A YI G  I VDGG
Sbjct: 289 NAVAWLASDEARYIHGAAIPVDGG 312

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 107 TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA 166
           T  E    + + N   +F   +   P +   G G+IV I+SVA + A P    Y    GA
Sbjct: 102 TPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA 161
Query: 167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP 226
           + QLTK +  + A   IR N++ PG+I T ++      P   ++ + +++R P    G  
Sbjct: 162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTA 218
Query: 227 DEVSSLVAFLCFPAASYITGQVICVDGGMT 256
            +V+  V FL    A+Y+ G  + +DG  T
Sbjct: 219 AQVADAVMFLAGEDATYVNGAALVMDGAYT 248

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N   VF   +     +K +G G I+ ISS+ G+        Y     A+  LTK    E 
Sbjct: 112 NLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 171
Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
               IR NSI PG+++T ++D +  D          + +T + R  EP EVS+LV +L  
Sbjct: 172 GPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLAS 221
Query: 239 PAASYITGQVICVDGGMTVNGF 260
             +SY TG    VDGG TV G 
Sbjct: 222 DESSYSTGAEFVVDGG-TVAGL 242

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLSSRE 72
           +TG T GIG  I   LA  GA I+     +  E+ + R       G+KV     DLS  E
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 73  QREKLMETVSSIFQ-GKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
               L++  +++ Q G+                 D   E    + + N  +VFH +  A 
Sbjct: 69  AVRGLVD--NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+     Y      +   TK    E A   I AN+I PG
Sbjct: 127 PHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186
Query: 192 VIRTSLSDA-IRHDPAKNKIVEGLVSR------TPICRPGEPDEVSSLVAFLCFPAASYI 244
            +RT L +  I     KN + +   +R       P  +   P+++     FL   AA+ I
Sbjct: 187 WVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQI 246
Query: 245 TGQVICVDGGMT 256
           TG  + VDGG T
Sbjct: 247 TGTTVSVDGGWT 258

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 34  GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKXXXXX 93
           GA +  C ++++    R  E +L G      +CD++  +  + L+      F        
Sbjct: 33  GARVVICDKDES--GGRALEQELPGAVFI--LCDVTQEDDVKTLVSETIRRFGRLDCVVN 88
Query: 94  XXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA 153
                  P+   +T+A+    L   N    + L+KLA P L+ S  G ++ ISS+ G   
Sbjct: 89  NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIG 147
Query: 154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD---AIRHDPAKNKI 210
                 Y    GA+  +TK L  +++   +R N I+PG I T L +   A+  DP +  I
Sbjct: 148 QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP-RASI 206
Query: 211 VEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
            EG++++ P+ R G+P EV +   FL    A++ TG  + V GG
Sbjct: 207 REGMLAQ-PLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 17/248 (6%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T GIG AI       GAI+      + +L E   +        + ++ D  S +Q
Sbjct: 31  LVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ 90
Query: 74  ----REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
                E+ ME +  +                 ++  D  A  ++   +   E       L
Sbjct: 91  LAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRE-------L 143
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
            H +++    G I+ I+S+ GV   P    Y      +   +K L  E A  NI  N IA
Sbjct: 144 IHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIA 202
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG I+++++D +       K  E +++  P+ R G  +E++    +L    A+Y+TGQ +
Sbjct: 203 PGFIKSAMTDKLNE-----KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTL 257
Query: 250 CVDGGMTV 257
            ++GGM +
Sbjct: 258 HINGGMAM 265

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+ GIG A+V+ L  +GA + + S ++         +K+          D+++ E+
Sbjct: 18  IVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI----------DVTNEEE 67
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++ +E  +  + G+                  T  E    +   N    + ++K   P+
Sbjct: 68  VKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG-- 191
           + A G+G I+ I+SV    A      Y     A+  LT+ +  + A   IR N++ PG  
Sbjct: 127 MLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTI 185
Query: 192 ----VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
               VI+ +  +    + A  + +E    + P+ R G P+EV+ +VAFL    +S+ITG 
Sbjct: 186 MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGA 245
Query: 248 VICVDGGMTVNGFNPTCCPNA 268
            + VDGG+      P   PNA
Sbjct: 246 CLTVDGGLLSK--LPISTPNA 264

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 26/261 (9%)
Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERL-------QEWKLKGLKVTGSV 65
           +TGG +GIG  I E+LA  GF   +    + + +  E +       Q+    GL VT   
Sbjct: 7   VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKA 66
Query: 66  -CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVF 124
             D +  E  EKL         G              K  L+ T E +  + S N  SVF
Sbjct: 67  NFDSAIDEAAEKL---------GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVF 117
Query: 125 HLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
              + A       G  G I+  +S+A +   P+   Y     A+  LT+    E A    
Sbjct: 118 FGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGH 177
Query: 184 RANSIAPGVIRTSLSDAIRHDPAK------NKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
             N+ APG++ T + + I  + +K       +  +   S   + RP  P++V+ LV+FL 
Sbjct: 178 TVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA 237
Query: 238 FPAASYITGQVICVDGGMTVN 258
              ++Y+TGQV+ VDGGM  N
Sbjct: 238 SENSNYVTGQVMLVDGGMLYN 258

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG AI E  A  GA I     +     E     +  G +V    CD+S     
Sbjct: 12  ITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDV 69
Query: 75  EKLMETVSSIF-QGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E   + V S F +              P + L  T E        N +S F ++K   P 
Sbjct: 70  EAFGKQVISTFGRCDILVNNAGIYPLIPFDEL--TFEQWKKTFEINVDSGFLMAKAFVPG 127
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K +G G I+ ++S            Y     A    T+ L  +  KD I  N+IAP ++
Sbjct: 128 MKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLV 187
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           RT+ ++A     A   ++  ++   P  R   P +++   AFL    AS+ITGQ + VDG
Sbjct: 188 RTATTEA-SALSAMFDVLPNMLQAIP--RLQVPLDLTGAAAFLASDDASFITGQTLAVDG 244
Query: 254 GM 255
           GM
Sbjct: 245 GM 246

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
            ++   ITG   GIG A +E  A  GA +  C   +  L E  +   +    V   V D 
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE--AVGAHPVVXDVADP 61
Query: 69  SSREQREKLMETVSSI--FQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
           +S E+     E ++ +    G              K  L+   ++   LR  N    F +
Sbjct: 62  ASVER--GFAEALAHLGRLDGVVHYAGITRDNFHWKXPLE---DWELVLR-VNLTGSFLV 115
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRA 185
           +K A    +    G IV  +S   V    L    Y      +  LT+ L  E  +  IR 
Sbjct: 116 AKAASEAXREKNPGSIVLTASR--VYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRV 173
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N++APG I T  +  +       K+ E  ++ TP+ R G+P EV+    FL    +S+IT
Sbjct: 174 NTLAPGFIETRXTAKV-----PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFIT 228
Query: 246 GQVICVDGGMTVN 258
           GQV+ VDGG T+ 
Sbjct: 229 GQVLFVDGGRTIG 241

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLSSRE 72
           +TG T GIG  I   LA  GA I+     +  E+ + R       G+KV     DLS  E
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 73  QREKLMETVSSIFQ-GKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
               L++  +++ Q G+                 D   E    + + N  +VFH +  A 
Sbjct: 69  AVRGLVD--NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+     Y      +   TK    E A   I AN+I PG
Sbjct: 127 PHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186
Query: 192 VIRTSLSDA-IRHDPAKNKIVEGLVSR------TPICRPGEPDEVSSLVAFLCFPAASYI 244
            +R+ L +  I     KN + +   +R       P  +   P+++     FL   AA+ I
Sbjct: 187 WVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQI 246
Query: 245 TGQVICVDGGMT 256
           TG  + VDGG T
Sbjct: 247 TGTTVSVDGGWT 258

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 13/251 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSRE 72
            +TG  RGIG  +  EL   G  +     N TE  E +    K  G        ++   E
Sbjct: 33  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE 92
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              ++ E    IF GK                 D T E    + + N    F +++ A+ 
Sbjct: 93  DIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYK 151
Query: 133 LLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            L+  G   ++ + S+ G   A P   +Y    GA+    + +  + A   I  N +APG
Sbjct: 152 HLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 209
Query: 192 VIRTSLSDAI------RHDPAKNKIVE--GLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
            I+T +  A+        +   N+ V+    V  +P+ R G P +++ +V FL      +
Sbjct: 210 GIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGW 269
Query: 244 ITGQVICVDGG 254
           +TG+VI +DGG
Sbjct: 270 VTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 13/251 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSRE 72
            +TG  RGIG  +  EL   G  +     N TE  E +    K  G        ++   E
Sbjct: 33  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE 92
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              ++ E    IF GK                 D T E    + + N    F +++ A+ 
Sbjct: 93  DIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYK 151
Query: 133 LLKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            L+  G   ++ + S+ G   A P   +Y    GA+    + +  + A   I  N +APG
Sbjct: 152 HLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 209
Query: 192 VIRTSLSDAI------RHDPAKNKIVE--GLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
            I+T +  A+        +   N+ V+    V  +P+ R G P +++ +V FL      +
Sbjct: 210 GIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGW 269
Query: 244 ITGQVICVDGG 254
           +TG+VI +DGG
Sbjct: 270 VTGKVIGIDGG 280

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 12/252 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLSSRE 72
           +TG T GIG  I   LA  GA I+     +  E+ + R       G+KV     DLS  E
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 73  QREKLMETVSSIFQ-GKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
               L++  +++ Q G+                 D   E    + + N  +VFH +  A 
Sbjct: 69  AVRGLVD--NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+     Y      +   TK    E A   I AN+I PG
Sbjct: 127 PHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186
Query: 192 VIRTSLSDA-IRHDPAKNKIVEGLVSR------TPICRPGEPDEVSSLVAFLCFPAASYI 244
            +R  L +  I     KN + +   +R       P  +   P+++     FL   AA+ I
Sbjct: 187 WVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQI 246
Query: 245 TGQVICVDGGMT 256
           TG  + VDGG T
Sbjct: 247 TGTTVSVDGGWT 258

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 104/254 (40%), Gaps = 14/254 (5%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ---EWKLKGLKVTGSVCDLSSR 71
           +TG T GIG A+  ELA  GA +      Q E  ER +   E K  G+K      DLS  
Sbjct: 9   VTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKF-GVKAYYLNADLSDA 67
Query: 72  EQREKLMETVSSIFQG-KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
           +     +   +    G              P E      +  + + + N  +VFH +  A
Sbjct: 68  QATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPV--DKWNAIIALNLSAVFHGTAAA 125
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P+++  G G I+ I+S  G+ A+     Y      +  LTK    E A   I  N+I P
Sbjct: 126 LPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICP 185
Query: 191 GVIRTSLSDAIRHDPAKNKIV-------EGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           G +RT L +      ++ K +       E L  + P  +   P+++     FL   AA  
Sbjct: 186 GWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQ 245
Query: 244 ITGQVICVDGGMTV 257
           +TG  + +DGG T 
Sbjct: 246 MTGTTLSLDGGWTA 259

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           N +   ITG T GIG A  +     GA +    R +  L+  + E    G    G   D 
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADS 84
Query: 69  SSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           ++  + ++L E V +   G+                 + T E        N + V    +
Sbjct: 85  ANLAELDRLYEKVKAE-AGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A PLL A G+ + V   S AG T  P   +Y     A+    ++   +     IR N++
Sbjct: 144 KALPLL-ARGSSV-VLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTL 201
Query: 189 APGVIRTS-LSDAIRHDPAKNK-IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +PG   T+ L +    DP + + ++  L ++ P  R G  +EV++   FL    +S++TG
Sbjct: 202 SPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVTG 261
Query: 247 QVICVDGG 254
             + VDGG
Sbjct: 262 AELFVDGG 269

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 13/248 (5%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   +TG  +GIG AI   LA  GA +     N              G K      D+S 
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS---IGKKARAIAADISD 63
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTA-EYMSTLRSTNFESVFHLSKL 129
               + L   + ++  G             P  A D    ++   +   N    F +++ 
Sbjct: 64  PGSVKALFAEIQALTGG--IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRA 121
Query: 130 AHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
               ++A+G  G ++ I+S       P    Y    G +   T+ L  E  K NI AN++
Sbjct: 122 GTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAV 181
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR-PGEPDEVSSLVAFLCFPAASYITGQ 247
            PG+I    SD ++  P       G V      +  G+P+ ++ +V+FL    A +ITGQ
Sbjct: 182 TPGLIE---SDGVKASPHNEAF--GFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQ 236
Query: 248 VICVDGGM 255
            + VD GM
Sbjct: 237 TLNVDAGM 244

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           K +G G I+ ISS+ G+        Y     A+  LTK    E     IR NSI PG+++
Sbjct: 128 KEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVK 187
Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T  +D +  D          + +T + R  EP EVS+LV +L    +SY TG    VDGG
Sbjct: 188 TPXTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237
Query: 255 MTVNGF 260
            TV G 
Sbjct: 238 -TVAGL 242

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 99/257 (38%), Gaps = 10/257 (3%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN--ERLQEWKLKGLKVTGSVC 66
           +E    +TGG+ GIG A VE L   GA +  C+R+   L   E     +  G ++  SVC
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66
Query: 67  DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+    Q     E       G                  +TT E  S      F SV H 
Sbjct: 67  DVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
            +   P L++  +  IV ++S+      P           +  L + +  E A   +R N
Sbjct: 126 VRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVN 185
Query: 187 SIAPGVIRTS-------LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
            I  G++ +          +    D A+         + P+ R G+P E +  + FL  P
Sbjct: 186 GILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASP 245
Query: 240 AASYITGQVICVDGGMT 256
            ++Y TG  I V GG++
Sbjct: 246 LSAYTTGSHIDVSGGLS 262

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N  S+F  +K A P + A G  I+ F S        P    Y    GA+   T+ L  ++
Sbjct: 118 NLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGL-AKE 175
Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
               IR N++ PG+I T+  D       K ++ E +   T + R G  ++V+ LVAFL  
Sbjct: 176 VGPKIRVNAVCPGMISTTFHDTF----TKPEVRERVAGATSLKREGSSEDVAGLVAFLAS 231
Query: 239 PAASYITGQVICVDGGM 255
             A+Y+TG    ++GG+
Sbjct: 232 DDAAYVTGACYDINGGV 248

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 15/250 (6%)
Query: 15  ITG--GTRGIGHAIVEELAGFGAI--IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +TG  G +G+G       A  GA   I   SR Q       +  K  G+K     C + S
Sbjct: 25  VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDS 84
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            E  EKL++ V + F G+                LD + E  + +   +    FH +K  
Sbjct: 85  YESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAV 143
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN---QLTKHLECEQAKDNIRANS 187
               K  G G +V  +S++G  A         YN A      + + L  E  +D  R NS
Sbjct: 144 GHHFKERGTGSLVITASMSGHIA-NFPQEQTSYNVAKAGCIHMARSLANEW-RDFARVNS 201
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+PG I T LSD +   P + + +    S  P+ R G   E+     +    A++Y TG 
Sbjct: 202 ISPGYIDTGLSDFV---PKETQQL--WHSMIPMGRDGLAKELKGAYVYFASDASTYTTGA 256
Query: 248 VICVDGGMTV 257
            + +DGG T 
Sbjct: 257 DLLIDGGYTT 266

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T G+ G+G A   ELA  GA +   SRN+ +L       ++  L V+G+  D+ + + R
Sbjct: 12  VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS--RIASL-VSGAQVDIVAGDIR 68
Query: 75  E-----KLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
           E     +L E    +  G             P   ++   E           S   + + 
Sbjct: 69  EPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRR 126
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A   +   G G +V+I SV  +       L       +  + + L  E A   +  N++ 
Sbjct: 127 AAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186
Query: 190 PGVIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           P +I T    ++  + A+       + ++ + SR P+ R G+P+E++S+VAFL    AS+
Sbjct: 187 PSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASF 246
Query: 244 ITGQVICVDGG 254
           ITG VI VDGG
Sbjct: 247 ITGAVIPVDGG 257

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 98/253 (38%), Gaps = 10/253 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG AI   L   G  +     N         E    G        D+S R+Q
Sbjct: 6   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 65
Query: 74  REKLMETVSSIFQG-KXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               +E       G              P E++  T E +  + + N + V    + A  
Sbjct: 66  VFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI--TPEIVDKVYNINVKGVIWGIQAAVE 123
Query: 133 LLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             K  G  G I+   S AG    P   +Y     A+  LT+    + A   I  N   PG
Sbjct: 124 AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPG 183
Query: 192 VIRTSLSDAIRH---DPAKNKIVEG---LVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +++T +   I     + A   +  G      R  + R  EP++V++ V++L  P + Y+T
Sbjct: 184 IVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMT 243
Query: 246 GQVICVDGGMTVN 258
           GQ + +DGGM  N
Sbjct: 244 GQSLLIDGGMVFN 256

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 27/254 (10%)
Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG + GIG A+ E  A  GA   I   S    E  E LQ  K  G+      C++S  +
Sbjct: 39  VTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ--KTYGVHSKAYKCNISDPK 96
Query: 73  -------QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
                  Q+EK   T+  +F               P+  +D    + + + S +   V++
Sbjct: 97  SVEETISQQEKDFGTID-VF----VANAGVTWTQGPEIDVDNYDSW-NKIISVDLNGVYY 150
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDN 182
            S     + K +G G ++  SS++G     +  L  PYN    A   L K L  E A   
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISG-KIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP-F 208
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
            R N+I+PG I T ++D    D  K K  +     TP+ R G   E+     +L   A++
Sbjct: 209 ARVNTISPGYIDTDITDFASKD-MKAKWWQ----LTPLGREGLTQELVGGYLYLASNAST 263
Query: 243 YITGQVICVDGGMT 256
           + TG  + +DGG T
Sbjct: 264 FTTGSDVVIDGGYT 277

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 103/254 (40%), Gaps = 16/254 (6%)
Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLS 69
           ITG T GIG AI   LA  GA I+        E+     E  + GL  +G+V     D +
Sbjct: 30  ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDE--VAGLS-SGTVLHHPADXT 86
Query: 70  SREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
              +       V+  F G              K   D   E    + + N  S FH  + 
Sbjct: 87  KPSEIADXXAXVADRFGGADILVNNAGVQFVEK-IEDFPVEQWDRIIAVNLSSSFHTIRG 145
Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A P  K  G G I+ I+S  G+ A+P    Y      +  LTK +  E A+  +  NSI 
Sbjct: 146 AIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSIC 205
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP-------DEVSSLVAFLCFPAAS 242
           PG + T L +    D A+ + +        +   G+P       ++V+SL  +L    A+
Sbjct: 206 PGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYLAGDDAA 265
Query: 243 YITGQVICVDGGMT 256
            ITG  +  DGG T
Sbjct: 266 QITGTHVSXDGGWT 279

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 163 YNGAMNQLTKHLECEQA---KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP 219
           Y G+ N LT  +    A   +  +R N+IAPG   T L  A   DP   + +   V   P
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV--PP 212
Query: 220 ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM 255
           + R  EP E++S++AFL  PAASY+ G  I +DGG+
Sbjct: 213 MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 25/253 (9%)
Query: 20  RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQRE 75
           R +G AI  +L   GA +    +      ERL+    K  +  G       D++  E+ +
Sbjct: 20  RSLGFAIAAKLKEAGAEVALSYQA-----ERLRPEAEKLAEALGGALLFRADVTQDEELD 74
Query: 76  KLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLR-------STNFESVFHLSK 128
            L   V   F G             P+EA++    Y+ T R         +  S+  +++
Sbjct: 75  ALFAGVKEAFGG--LDYLVHAIAFAPREAME--GRYIDTRRQDWLLALEVSAYSLVAVAR 130
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A PLL+  G   IV ++  A     P   +      A+    ++L  E     +R N+I
Sbjct: 131 RAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAI 188
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           + G +RT    A R  P   K+ + +    P+ R    +EV +L  FL  P AS ITG+V
Sbjct: 189 SAGPVRTV---AARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV 245
Query: 249 ICVDGGMTVNGFN 261
           + VD G  + G  
Sbjct: 246 VYVDAGYHIMGME 258

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 19/254 (7%)
Query: 15  ITGGTRGIGHAIVEELAGFGAI---IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           +TGG RGIG A    +A  GA    I+  + +  E+ E++   K  G+K     CD+S+ 
Sbjct: 19  VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG--KEFGVKTKAYQCDVSNT 76
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSK-LA 130
           +   K ++ + +   G              K A + T E  + +   N   VF+  + +A
Sbjct: 77  DIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA 135
Query: 131 HPLLKASGNGIIVFISSVAG-------VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
              L+    G IV  SS++        +  +     Y     A + L K L  E A   I
Sbjct: 136 KLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 195
Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+++PG + T   D   H     KI +   S  P+ R  +P+E++     L    A+Y
Sbjct: 196 RVNALSPGYVNT---DQTAH--MDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY 250
Query: 244 ITGQVICVDGGMTV 257
           +TG    +DGG  +
Sbjct: 251 MTGGEYFIDGGQLI 264

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 18/247 (7%)
Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG +RGIG AI   LA  GF  +I+   +      E   + +  G K   +  D+S   
Sbjct: 32  VTGASRGIGAAIAARLASDGFTVVINYAGK-AAAAEEVAGKIEAAGGKALTAQADVSDPA 90
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYM-STLRSTNFESVFHLSKLAH 131
              +L  T    F G             P   +  T + +   + + N +  F+  + A 
Sbjct: 91  AVRRLFATAEEAFGG--VDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANSI 188
             L+  G  II   +S  G+    L P YG Y  A   +   T  L  E    +I  N++
Sbjct: 149 QRLRVGGR-IINXSTSQVGL----LHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAV 203
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG   T L    + D  +++  +      P+ R G P +++  VAFL  P  +++ GQV
Sbjct: 204 APGPTATDLFLEGKSDEVRDRFAK----LAPLERLGTPQDIAGAVAFLAGPDGAWVNGQV 259
Query: 249 ICVDGGM 255
           +  +GG+
Sbjct: 260 LRANGGI 266

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N    F +++ A  +L+  G+  +V   SVAG+ A  L        G +  L + L  E 
Sbjct: 111 NLTGSFLVARKAGEVLEEGGS--LVLTGSVAGLGAFGLAHYAAGKLGVVG-LARTLALEL 167
Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           A+  +R N + PG+I+T ++  +     + +     V  +P+ R G P+EV+    FL  
Sbjct: 168 ARKGVRVNVLLPGLIQTPMTAGLPPWAWEQE-----VGASPLGRAGRPEEVAQAALFLLS 222
Query: 239 PAASYITGQVICVDGGMTV 257
             ++YITGQ + VDGG ++
Sbjct: 223 EESAYITGQALYVDGGRSI 241

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 10/249 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSRE 72
            +TG  RGIG A+   L   GA +     N T+  E++  E K  G        D+    
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVP 81
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           +  KL +   + F G                  D T E    + S N    F +++ A+ 
Sbjct: 82  EIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR 140
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L   G  I++  S+ +   + P   LY    GA++   +    +     I  N++APG 
Sbjct: 141 HLTEGGR-IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGG 199
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSR-------TPICRPGEPDEVSSLVAFLCFPAASYIT 245
             T +   + H    N        R       +P+ R G P +V+++V FL      ++ 
Sbjct: 200 TVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVN 259
Query: 246 GQVICVDGG 254
           G+V+ +DGG
Sbjct: 260 GKVLTLDGG 268

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 13/247 (5%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           +   +TG  +GIG AI   LA  GA +     N              G K      D+S 
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS---IGKKARAIAADISD 63
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTA-EYMSTLRSTNFESVFHLSKL 129
               + L   + ++  G             P  A D    ++   +   N    F +++ 
Sbjct: 64  PGSVKALFAEIQALTGG--IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRA 121
Query: 130 AHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                +A+G  G ++ I+S       P    Y    G +   T+ L  E  K NI AN++
Sbjct: 122 GTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAV 181
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR-PGEPDEVSSLVAFLCFPAASYITGQ 247
            PG+I    SD ++  P       G V      +  G+P+ ++ +V+FL    A +ITGQ
Sbjct: 182 TPGLIE---SDGVKASPHNEAF--GFVEXLQAXKGKGQPEHIADVVSFLASDDARWITGQ 236
Query: 248 VICVDGG 254
            + VD G
Sbjct: 237 TLNVDAG 243

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 13/251 (5%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIH-----TCSRNQTELNERLQEWKLKGLKVTG 63
            ++   +TGG  GIG A     A  GA +          +  ++   ++E   K + + G
Sbjct: 48  KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG 107
Query: 64  SVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESV 123
              DLS       L+        G               E  D T+E      + N  ++
Sbjct: 108 ---DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL 164
Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
           F +++ A PLL    +  I+  SS+     +P    Y     A+   ++ L  + A+  I
Sbjct: 165 FWITQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGI 222
Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N +APG I T+L   I     ++KI +    +TP+ R G+P E++ +  +L    +SY
Sbjct: 223 RVNIVAPGPIWTALQ--ISGGQTQDKIPQ-FGQQTPMKRAGQPAELAPVYVYLASQESSY 279
Query: 244 ITGQVICVDGG 254
           +T +V  V GG
Sbjct: 280 VTAEVHGVCGG 290

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           K A P++   G+  IV ++ + G    P   + G    +++   K+L  +  K+NIR NS
Sbjct: 131 KAARPMMTEGGS--IVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNS 188
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+ G IRT  +  I      N I++ +  R P+ R   P+EV    AFL    +  ITG+
Sbjct: 189 ISAGPIRTLSAKGISD---FNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGE 245
Query: 248 VICVDGGMTV 257
            + VD G  +
Sbjct: 246 NLHVDSGFHI 255

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 25/251 (9%)
Query: 20  RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQRE 75
           R +G AI  +L   GA +    +      ERL+    K  +  G       D++  E+ +
Sbjct: 20  RSLGFAIAAKLKEAGAEVALSYQA-----ERLRPEAEKLAEALGGALLFRADVTQDEELD 74
Query: 76  KLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLR-------STNFESVFHLSK 128
            L   V   F G             P+EA +    Y+ T R         +  S+  +++
Sbjct: 75  ALFAGVKEAFGG--LDYLVHAIAFAPREAXE--GRYIDTRRQDWLLALEVSAYSLVAVAR 130
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A PLL+  G   IV ++  A     P   +      A+    ++L  E     +R N+I
Sbjct: 131 RAEPLLREGGG--IVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGPKGVRVNAI 188
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           + G +RT    A R  P   K  + +    P+ R    +EV +L  FL  P AS ITG+V
Sbjct: 189 SAGPVRTV---AARSIPGFTKXYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV 245
Query: 249 ICVDGGMTVNG 259
           + VD G  + G
Sbjct: 246 VYVDAGYHIXG 256

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 13/246 (5%)
Query: 14  FITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSS 70
            +TG +RGIG AI E LAG GA  I+H      T  + +R+        ++ G   DLS 
Sbjct: 37  LVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG---DLSE 93
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
                 L+E   +I                   AL  T   ++   + N  S   + + A
Sbjct: 94  AGAGTDLIERAEAIAPVDILVINASAQINATLSAL--TPNDLAFQLAVNLGSTVDMLQSA 151
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P + A   G +V I S+  +    +   Y     A + L +    + A DN+  N++AP
Sbjct: 152 LPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAP 211
Query: 191 GVIRTSL-SDAIRHDP-AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           G++ T   +D    DP   ++ V  L     + R G P+E+     FL   A S++TG+ 
Sbjct: 212 GLVDTDRNADRRAQDPEGWDEYVRTL---NWMGRAGRPEEMVGAALFLASEACSFMTGET 268
Query: 249 ICVDGG 254
           I + GG
Sbjct: 269 IFLTGG 274

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 10/248 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL-QEWKLKGLKVTGSVCDLSSREQ 73
           +TG  RGIG A+   L   GA +     N T+  E++  E K  G        D+    +
Sbjct: 23  VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPE 82
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             KL +   + F G                  D T E    + S N    F +++ A+  
Sbjct: 83  IVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH 141
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L   G  I++  S+ +   + P   L+    GA++   +    +     I  N++APG  
Sbjct: 142 LTEGGR-IVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGT 200
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSR-------TPICRPGEPDEVSSLVAFLCFPAASYITG 246
            T +   + H    N        R       +P+ R G P +V+++V FL      ++ G
Sbjct: 201 VTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNG 260
Query: 247 QVICVDGG 254
           +V+ +DGG
Sbjct: 261 KVLTLDGG 268

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 109/259 (42%), Gaps = 6/259 (2%)
Query: 2   YSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE-RLQEWKLKGLK 60
           Y+ V   + +   ITG T+GIG  I    A  GA +    R+ +EL+  R    +  G  
Sbjct: 12  YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD 71
Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNF 120
           V     DL+  +   +L    +  F G             P+  +DT  +      + N 
Sbjct: 72  VHTVAIDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNL 130
Query: 121 ESVFHL-SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
            +   L S +   ++ A   G I+ ++S A +   P    Y      +   TK L  E  
Sbjct: 131 RAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190
Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
              IRANS+ P V+ T +   +  D AK+     +++R P+ R   P EVS  V +L   
Sbjct: 191 PHGIRANSVCPTVVLTEMGQRVWGDEAKSAP---MIARIPLGRFAVPHEVSDAVVWLASD 247
Query: 240 AASYITGQVICVDGGMTVN 258
           AAS I G  I VDGG T+ 
Sbjct: 248 AASMINGVDIPVDGGYTMG 266

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 120 FESVFHLSKLAHPLLKASG------NGIIVFISSVAGV-TAAPLTPLYGPYNGAMNQLTK 172
           F+ VF+L+      +   G       G I+  SS+A V T  P   LY     A+    +
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCR 182
Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSD--AIRHDPA------KNKIVEGLVSRTPICRPG 224
               +     +  N IAPG ++T + D  +  + P       + KI EGL +  P+ R G
Sbjct: 183 AFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG 242
Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGG 254
            P ++   V+ LC   + +I GQVI + GG
Sbjct: 243 YPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 12/244 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ- 73
           + GGT G G A V  L   GA +    RN++ +    +E+  +   +   + DL+     
Sbjct: 13  VIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVL 72
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLR-STNFESVFHLSKLAHP 132
                +T+ +I                  E  D  +E     + + N +  F   +   P
Sbjct: 73  GAAAGQTLGAI------DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 126
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L++  G+  IVF SSVA     P   +Y     A+      L  E     IR NS++PG 
Sbjct: 127 LIREGGS--IVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGF 184
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSR-TPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           I T          A+    + L    TP  R G  DEV+  V FL F  A++ TG  + V
Sbjct: 185 IDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLAV 243
Query: 252 DGGM 255
           DGG+
Sbjct: 244 DGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 12/244 (4%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ- 73
           + GGT G G A V  L   GA +    RN++ +    +E+  +   +   + DL+     
Sbjct: 12  VIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVL 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLR-STNFESVFHLSKLAHP 132
                +T+ +I                  E  D  +E     + + N +  F   +   P
Sbjct: 72  GAAAGQTLGAI------DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 125
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L++  G+  IVF SSVA     P   +Y     A+      L  E     IR NS++PG 
Sbjct: 126 LIREGGS--IVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGF 183
Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSR-TPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           I T          A+    + L    TP  R G  DEV+  V FL F  A++ TG  + V
Sbjct: 184 IDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLAV 242
Query: 252 DGGM 255
           DGG+
Sbjct: 243 DGGL 246

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGE 225
           A+  L +    + A   +R N +APG + T L  A + DP   +     V+  P+ R  E
Sbjct: 159 AVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA--PLGRGSE 216
Query: 226 PDEVSSLVAFLCFPAASYITGQVICVDGGM 255
           P EV+  +AFL  P AS+I G V+ VDGGM
Sbjct: 217 PREVAEAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           + F   ++   L+KA      + I+++   T +            +  ++K L  E  K 
Sbjct: 139 TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKY 198
Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
            +R N I PG I+T  + + R DP      E ++ R P  R G  +E+++L AFLC   A
Sbjct: 199 GMRFNVIQPGPIKTKGAFS-RLDPTGTFEKE-MIGRIPCGRLGTVEELANLAAFLCSDYA 256
Query: 242 SYITGQVICVDGGMTV 257
           S+I G VI  DGG  V
Sbjct: 257 SWINGAVIKFDGGEEV 272

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 8/244 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG A+   LA  G   H    +           K+ G        D+S  +Q
Sbjct: 33  IVTGAGAGIGLAVARRLADEG--CHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQ 89
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +++   + F G                 +DTT E    + + N    +  +K A P 
Sbjct: 90  IIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR 148
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +   G G IV +SS+AG  A   T  YG     + QL++    E     IR+N++ P  +
Sbjct: 149 MIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFV 208
Query: 194 RTSLSD---AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            T +     A+            +++R    R   P+E++ +V FL    AS ITG    
Sbjct: 209 DTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFLLSDDASMITGTTQI 267
Query: 251 VDGG 254
            DGG
Sbjct: 268 ADGG 271

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 121 ESVFHLSKLAH---PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
            ++ H   +AH   P LKA+  G IV ISS   VT    T  Y    GA   LT+     
Sbjct: 112 RNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVA 170
Query: 178 QAKDNIRANSIAPGVIRTSLSD---AIRHDPAKNKIVEGLVSRTPICRP-GEPDEVSSLV 233
             +  +R N++ P  + T L     A   DP + K+ E + ++ P+ R    PDE++   
Sbjct: 171 LREHGVRVNAVIPAEVMTPLYRNWIATFEDP-EAKLAE-IAAKVPLGRRFTTPDEIADTA 228
Query: 234 AFLCFPAASYITGQVICVDGGMT 256
            FL  P AS+ TG+ + VDGG T
Sbjct: 229 VFLLSPRASHTTGEWLFVDGGYT 251

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 23/261 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            ITGG  G+G A+V+     GA +    ++     ERL+E ++  G    G V D+ S +
Sbjct: 9   LITGGASGLGRALVDRFVAEGARVAVLDKSA----ERLRELEVAHGGNAVGVVGDVRSLQ 64
Query: 73  QREKLME-------TVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
            +++  E        + ++                P++ +D        +   N +   H
Sbjct: 65  DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA---FDDIFHVNVKGYIH 121
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             K   P L +S  G +VF  S AG       PLY     A+  L + +  E A  ++R 
Sbjct: 122 AVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRV 179
Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKI-----VEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           N +APG + T L        ++  I      + L S  PI R    +E +    F     
Sbjct: 180 NGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG 239
Query: 241 ASY-ITGQVICVDGGMTVNGF 260
            S   TG ++  DGGM V GF
Sbjct: 240 DSLPATGALLNYDGGMGVRGF 260

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 21/259 (8%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG AI E     G+ +   S +         E K   ++     CD+++ +Q
Sbjct: 12  IVTGASMGIGRAIAERFVDEGSKVIDLSIHDP------GEAKYDHIE-----CDVTNPDQ 60
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++ +   +                K    +  E+   +   N    ++ SK A P 
Sbjct: 61  VKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRII-DVNLFGYYYASKFAIPY 119
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +  S +  IV ISSV           Y     A+  LTK +  + A   +R N++ P  I
Sbjct: 120 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATI 178
Query: 194 RTSLSDA-----IRHDPAK-NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
            T L        +  DP +  K +       P+ R G+P EV+S VAFL    AS+ITG 
Sbjct: 179 DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGT 238
Query: 248 VICVDGGMTVNGFNPTCCP 266
            + VDGG+++    P   P
Sbjct: 239 CLYVDGGLSIRA--PISTP 255

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 19/249 (7%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG AI E     G+ +   S +         E K   ++     CD+++ +Q 
Sbjct: 20  VTGASMGIGRAIAERFVDEGSKVIDLSIHDP------GEAKYDHIE-----CDVTNPDQV 68
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +  ++ +   +                K    +  E+   +   N    ++ SK A P +
Sbjct: 69  KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRII-DVNLFGYYYASKFAIPYM 127
Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
             S +  IV ISSV           Y     A+  LTK +  + A   +R N++ P  I 
Sbjct: 128 IRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATID 186
Query: 195 TSLSDA-----IRHDPAK-NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           T L        +  DP +  K +       P+ R G+P EV+S VAFL    AS+ITG  
Sbjct: 187 TPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTC 246
Query: 249 ICVDGGMTV 257
           + VDGG+++
Sbjct: 247 LYVDGGLSI 255

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 107 TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA 166
           T A++  +L   N E+ F + + A PL  A+G G IV ++S  G+   P   LY     A
Sbjct: 114 TDADWSLSL-GVNVEAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAA 172
Query: 167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-----NKIVEGLVSRTPIC 221
           +  LT+    + A   IR N++ P  + T     +R   AK     ++ V  L    P+ 
Sbjct: 173 LASLTQCXGXDHAPQGIRINAVCPNEVNTP---XLRTGFAKRGFDPDRAVAELGRTVPLG 229
Query: 222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           R  EP++++ +V FL   AA Y+ G ++ V+GG  V
Sbjct: 230 RIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 104/265 (39%), Gaps = 31/265 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            ITGG  G+G A+V+     GA +    ++     ERL E +   G  V G V D+ S E
Sbjct: 9   LITGGASGLGRALVDRFVAEGAKVAVLDKSA----ERLAELETDHGDNVLGIVGDVRSLE 64
Query: 73  QREKLME-------TVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFH 125
            +++           + ++                P+E+LD        +   N +   H
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAA---FDEVFHINVKGYIH 121
Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             K   P L AS  G ++F  S AG       PLY     A+  L + L  E A   +R 
Sbjct: 122 AVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAP-YVRV 179
Query: 186 NSIAPGVIRTSL---------SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           N +  G I + L         S AI   P    + + L S  PI R  E +E +    F 
Sbjct: 180 NGVGSGGINSDLRGPSSLGMGSKAISTVP----LADMLKSVLPIGRMPEVEEYTGAYVFF 235
Query: 237 CFPA-ASYITGQVICVDGGMTVNGF 260
                A+  TG ++  DGG+ V GF
Sbjct: 236 ATRGDAAPATGALLNYDGGLGVRGF 260

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 139 NGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSL 197
            G IV +SS A +  +    + Y     A++  T  L  E A + IR N++ PG+I T L
Sbjct: 159 GGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218
Query: 198 -SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
            +     D A+           P  R G P+EV+  + +L  P+ASY+TG ++ V GG
Sbjct: 219 HASGGLPDRAREX-----APSVPXQRAGXPEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 11/211 (5%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           N Q   +TG +RGIG  I  +L   GA ++   R+   L    QE +  G +    VCD 
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS 63
Query: 69  SSREQREKLMETVSSIFQGK-------XXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFE 121
           S   +   L E V    QG+                    K   +T A     + +    
Sbjct: 64  SQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123
Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
             +  S     L+  +G G+IV ISS   +      P YG    A ++L      E  + 
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRH 182
Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
            +   S+ PG+++T L   ++   AK ++++
Sbjct: 183 GVSCVSLWPGIVQTEL---LKEHMAKEEVLQ 210

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           + F   ++   L+KA      + I+++   T +            +   +K L  E  K 
Sbjct: 139 TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKY 198
Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
             R N I PG I+T  + + R DP      E  + R P  R G  +E+++L AFLC   A
Sbjct: 199 GXRFNVIQPGPIKTKGAFS-RLDPTGTFEKE-XIGRIPCGRLGTVEELANLAAFLCSDYA 256
Query: 242 SYITGQVICVDGGMTV 257
           S+I G VI  DGG  V
Sbjct: 257 SWINGAVIKFDGGEEV 272

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSR 71
            +TG  RGIG  I E  A  GA  H  + +     E L E      KV G+    D+++ 
Sbjct: 217 IVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAE---TASKVGGTALWLDVTAD 271
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +K+ E +     GK               A  T  + ++ +    +++V  ++ LA 
Sbjct: 272 DAVDKISEHLRDHHGGKADILV--------NNAGITRDKLLANMDDARWDAVLAVNLLA- 322
Query: 132 PLLKASG---------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           PL    G          G ++ +SS+AG+        Y      M  +T+ L    A   
Sbjct: 323 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKG 382
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I T ++ AI   P   + V   ++   + + G+P +V+  +A+   PA++
Sbjct: 383 ITINAVAPGFIETQMTAAI---PLATREVGRRLNS--LLQGGQPVDVAEAIAYFASPASN 437
Query: 243 YITGQVICVDG 253
            +TG VI V G
Sbjct: 438 AVTGNVIRVCG 448

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 117 STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LTPLYGPYNGAMNQLTKHLE 175
           S N  +   L +   P   A G+G++V ++S+  V   P  T  Y     A++  +K   
Sbjct: 109 SLNLFAAVRLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXS 168
Query: 176 CEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN---------KIVEGLVSRTPICRPGEP 226
            E +   +R   ++PG I T  S  +    AK          KI+   +   P+ RP +P
Sbjct: 169 KEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKP 228
Query: 227 DEVSSLVAFLCFPAASYITGQVICVDGG 254
           +EV++L+AFL    A+ ITG    +DGG
Sbjct: 229 EEVANLIAFLASDRAASITGAEYTIDGG 256

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSR 71
            +TG  RGIG  I E  A  GA  H  + +     E L E      KV G+    D+++ 
Sbjct: 201 IVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAE---TASKVGGTALWLDVTAD 255
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +K+ E +     GK               A  T  + ++ +    +++V  ++ LA 
Sbjct: 256 DAVDKISEHLRDHHGGKADILV--------NNAGITRDKLLANMDDARWDAVLAVNLLA- 306
Query: 132 PLLKASG---------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           PL    G          G ++ +SS+AG+        Y      M  +T+ L    A   
Sbjct: 307 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKG 366
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I T ++ AI   P   + V   ++   + + G+P +V+  +A+   PA++
Sbjct: 367 ITINAVAPGFIETQMTAAI---PLATREVGRRLNS--LLQGGQPVDVAEAIAYFASPASN 421
Query: 243 YITGQVICVDG 253
            +TG VI V G
Sbjct: 422 AVTGNVIRVCG 432

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 8/250 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   G G  + +  A  GA +    R++        E     L V     D+S    
Sbjct: 13  LITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA---ADISKEAD 69
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  +E   S F               P+ A     E    +   N   V+ ++    P 
Sbjct: 70  VDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPH 129
Query: 134 LKASGNG----IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
            K +G      +I+ ++S       P    Y    G +  +TK L  E A   IR  ++ 
Sbjct: 130 FKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN 189
Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           P    T L      + ++ +I +      P+ R  +PD+++   AFLC P AS ITG  +
Sbjct: 190 PVAGETPLLTTFMGEDSE-EIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVAL 248
Query: 250 CVDGGMTVNG 259
            VDGG ++ G
Sbjct: 249 DVDGGRSIGG 258

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 107 TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS--VAGVTAAPLTPLYGPYN 164
           T  +Y   L   N    FH+++ A       G+G IV I++  V        + L     
Sbjct: 116 TQEDYDHNL-GVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTK 174
Query: 165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPG 224
           G +N +T+ L  E ++  +R N+++PGVI+T    A  H          L    P+ R G
Sbjct: 175 GGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPAETHST--------LAGLHPVGRXG 226
Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGGM 255
           E  +V   V +L    A +ITG+++ VDGG 
Sbjct: 227 EIRDVVDAVLYLEH--AGFITGEILHVDGGQ 255

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSR 71
            +TG  RGIG  I E  A  GA  H  + +     E L E      KV G+    D+++ 
Sbjct: 225 IVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAE---TASKVGGTALWLDVTAD 279
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +K+ E +     GK               A  T  + ++ +    +++V  ++ LA 
Sbjct: 280 DAVDKISEHLRDHHGGKADILV--------NNAGITRDKLLANMDDARWDAVLAVNLLA- 330
Query: 132 PLLKASG---------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           PL    G          G ++ +SS+AG+        Y      M  +T+ L    A   
Sbjct: 331 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKG 390
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I T ++ AI   P   + V   ++   + + G+P +V+  +A+   PA++
Sbjct: 391 ITINAVAPGFIETQMTAAI---PLATREVGRRLNS--LLQGGQPVDVAEAIAYFASPASN 445
Query: 243 YITGQVICVDG 253
            +TG VI V G
Sbjct: 446 AVTGNVIRVCG 456

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 30/249 (12%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSR 71
            +TG  RGIG  I E  A  GA  H  + +     E L E      KV G+    D+++ 
Sbjct: 209 IVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAE---TASKVGGTALWLDVTAD 263
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +K+ E +     GK               A  T  + ++ +    +++V  ++ LA 
Sbjct: 264 DAVDKISEHLRDHHGGKADILV--------NNAGITRDKLLANMDDARWDAVLAVNLLA- 314
Query: 132 PLLKASG---------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           PL    G          G ++ +SS+AG+        Y      M  +T+ L    A   
Sbjct: 315 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKG 374
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I T ++ AI   P   + V   ++   + + G+P +V+  +A+   PA++
Sbjct: 375 ITINAVAPGFIETQMTAAI---PLATREVGRRLNS--LLQGGQPVDVAEAIAYFASPASN 429
Query: 243 YITGQVICV 251
            +TG VI V
Sbjct: 430 AVTGNVIRV 438

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLSSR 71
            +TG  RGIG  I E  A  GA  H  + +     E L E      KV G+    D+++ 
Sbjct: 238 IVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAE---TASKVGGTALWLDVTAD 292
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  +K+ E +     GK               A  T  + ++ +    +++V  ++ LA 
Sbjct: 293 DAVDKISEHLRDHHGGKADILV--------NNAGITRDKLLANMDDARWDAVLAVNLLA- 343
Query: 132 PLLKASG---------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
           PL    G          G ++ +SS+AG+        Y      M  +T+ L    A   
Sbjct: 344 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKG 403
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I T ++ AI   P   + V   ++   + + G+P +V+  +A+   PA++
Sbjct: 404 ITINAVAPGFIETQMTAAI---PLATREVGRRLNS--LLQGGQPVDVAEAIAYFASPASN 458
Query: 243 YITGQVICVDG 253
            +TG VI V G
Sbjct: 459 AVTGNVIRVCG 469

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 24/245 (9%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RGIG  I E  A  GA +     +    + +    K+ G  +T    D+++ +  
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALT---LDVTADDAV 274
Query: 75  EKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +K+   V+    GK               A  T  + ++ +    +++V  ++ LA   L
Sbjct: 275 DKITAHVTEHHGGKVDILV--------NNAGITRDKLLANMDEKRWDAVIAVNLLAPQRL 326
Query: 135 KAS--GNGII------VFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
                GNG I      + +SS+AG+        Y      M  L + L    A   I  N
Sbjct: 327 TEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITIN 386
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++APG I T +++AI   P   + V   ++   + + G+P +V+ L+A+   PA++ +TG
Sbjct: 387 AVAPGFIETKMTEAI---PLATREVGRRLNS--LFQGGQPVDVAELIAYFASPASNAVTG 441
Query: 247 QVICV 251
             I V
Sbjct: 442 NTIRV 446

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 13/254 (5%)
Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           + +   ITG  RGIG A  E     GA +     N         E       +   V D 
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQ 63
Query: 69  SSREQ-REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFE-SVFHL 126
           +S ++   +L++   SI                P   ++ T E    L + N   ++F +
Sbjct: 64  ASIDRCVAELLDRWGSI---DILVNNAALFDLAP--IVEITRESYDRLFAINVSGTLFMM 118
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
             +A  ++     G I+ ++S AG     L  +Y     A+  LT+       +  I  N
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178
Query: 187 SIAPGVIRTSLSDAIRHDPA------KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           +IAPGV+     D +    A      + +    + +  P  R G  ++++ +  FL  P 
Sbjct: 179 AIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238
Query: 241 ASYITGQVICVDGG 254
           A YI  Q   VDGG
Sbjct: 239 ADYIVAQTYNVDGG 252

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 9/234 (3%)
Query: 21  GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLM- 78
           GIG          GA +     ++  L E   +    GL +V   VCD++S E  + L+ 
Sbjct: 34  GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT 93
Query: 79  ETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-S 137
           +TV     G+                +D T E    + +    SV   ++ A    +   
Sbjct: 94  QTVEK--AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD 151
Query: 138 GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSL 197
             G+IV  +SV G  A      Y      +  LT+    E  +  +R N+++P + R   
Sbjct: 152 HGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211
Query: 198 SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            +      + +++++ L S     R  EP EV++ +AFL    +SY+TG+V+ V
Sbjct: 212 LE----KTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSV 261

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+A+G   ++FI+S  G       PLYGP   A   L +      ++D I   +I P   
Sbjct: 121 LRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFF 180
Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
                          ++ E +    P+ R G PDE+ +L+ FL    A+ I GQ     G
Sbjct: 181 NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTG 240
Query: 254 G 254
           G
Sbjct: 241 G 241

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 17/241 (7%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS 70
           Q   +TG +RGIG AI  +L   GA +   +R+  +L    +E    G +     CDLS 
Sbjct: 30  QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH 89
Query: 71  REQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTT--AEYMSTLRSTNFESVFHLSK 128
            +        V +   G+                L T   AE+   L + N ++ + L +
Sbjct: 90  SDAIAAFATGVLAA-HGRCDVLVNNAGVGWFGGPLHTMKPAEW-DALIAVNLKAPYLLLR 147
Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
              P + A+  G I+ ISS+AG         Y      +N L      E  +  +R + +
Sbjct: 148 AFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLV 207
Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG +RT                 GL ++       EPD+++ +VA L   A      +V
Sbjct: 208 APGSVRTEFG-------------VGLSAKKSALGAIEPDDIADVVALLATQADQSFISEV 254
Query: 249 I 249
           +
Sbjct: 255 L 255

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 99/259 (38%), Gaps = 19/259 (7%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCS-------------RNQTELNERLQEWKLKGLK 60
           FITG  RG G +    LA  GA I  C               +  +L+E  +  + +G K
Sbjct: 19  FITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK 78
Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNF 120
               V D+       +L+      F G+                 + T E   T+   N 
Sbjct: 79  ALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNL 137
Query: 121 ESVFHLSKLAHPLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
              +   +   P +  +GNG  IV +SS AG+ A P    Y      +  LT  L  E  
Sbjct: 138 TGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG 197
Query: 180 KDNIRANSIAPGVIRTSL--SDAIRHDPAKNKIVEGLVSRTPICRPG--EPDEVSSLVAF 235
           +  IR NSI P  + T +   +A+    A++          P+   G    DEV+ +VA+
Sbjct: 198 EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAW 257
Query: 236 LCFPAASYITGQVICVDGG 254
           L    +  +TG  I VD G
Sbjct: 258 LAGDGSGTLTGTQIPVDKG 276

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 13/248 (5%)
Query: 14  FITGGTRGIG--HAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            ITGG+RGIG   A++    G+   ++  S N    +E +++ +  G +      D++  
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYAS-NSAAADEVVRQIREAGGQALAVQADVAKE 87
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDT-TAEYMSTLRSTNFESVFHLSKLA 130
            +     ETV +   G+                +D  T E +      N    F  ++ A
Sbjct: 88  REVLAXFETVDAQL-GRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREA 146
Query: 131 ---HPLLKASGNGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTKHLECEQAKDNIRAN 186
                       G IV +SS A    +P   + Y    GA++  T  L  E A + IR N
Sbjct: 147 VKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVN 206
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++ PG+I T +  A    P + + V     + P  R G   EV+  + +L    ASY TG
Sbjct: 207 AVRPGIIETDIH-ASGGLPNRARDV---APQVPXQRAGTAREVAEAIVWLLGDQASYTTG 262
Query: 247 QVICVDGG 254
            ++ V GG
Sbjct: 263 ALLDVTGG 270

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 33/248 (13%)
Query: 8   SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
           S++  Y + GGT GIG  + ++L     I+H  SR QT L                   D
Sbjct: 4   SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR-QTGL-------------------D 43
Query: 68  LSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPK-EALDTTAEYMSTLRSTNFESVFHL 126
           +S  +      ET+     G             P  + +D           T F      
Sbjct: 44  ISDEKSVYHYFETI-----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLA 98
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K     LK  G+  I   S +        T +    N A+   TK L  E A   IR N
Sbjct: 99  AKHGARYLKQGGS--ITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVN 154
Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+PG+ +T     +  D  ++ + +   S  P+ + GE  +++  +A+L     SY+TG
Sbjct: 155 AISPGLTKTEAYKGMNADD-RDAMYQRTQSHLPVGKVGEASDIA--MAYLFAIQNSYMTG 211
Query: 247 QVICVDGG 254
            VI VDGG
Sbjct: 212 TVIDVDGG 219

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 101 PKE-----ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP 155
           PKE      +DT+ E        +  S+  L++   PL++   NG IV +S        P
Sbjct: 111 PKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVP 169
Query: 156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV 215
              + G    A+    ++L  + AK   R N+I+ G ++T  + +I      + ++E   
Sbjct: 170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI---TGFHLLMEHTT 226
Query: 216 SRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
              P  +P   ++V     FLC   A  ITG+V+ VD G  + G
Sbjct: 227 KVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIMG 270

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 105/268 (39%), Gaps = 32/268 (11%)
Query: 14  FITGGTRGIGHAIVEELAGFGAII---------HTC----SRNQTELNERLQEWKLKGLK 60
           FITG  RG G A    +A  GA I          +C      +  +L+E ++  +    +
Sbjct: 15  FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR 74
Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNF 120
           +  +V D    ++  K+++   +   G+            P+   D T E    +   N 
Sbjct: 75  IVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINV 133
Query: 121 ESVFHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
              ++      P +++    G I+ ISS AG+   P    Y     A+  L +    E  
Sbjct: 134 TGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG 193
Query: 180 KDNIRANSIAPGVIR---------TSLSDAIRHDPAKNKIVEGLVSRTPICRP--GEPDE 228
           K +IR NS+ PG +          T++  A+  +P  + ++      TP       EP++
Sbjct: 194 KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL------TPFLPDWVAEPED 247
Query: 229 VSSLVAFLCFPAASYITGQVICVDGGMT 256
           ++  V +L    +  +T   I VD G T
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 117 STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
           + N    F+L +      +    G IV ++S A  T       YG    A+  L   +  
Sbjct: 103 AVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL 162
Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIR-HDPAKNKIVEGLVSR----TPICRPGEPDEVSS 231
           E A   +R N ++PG   T +   +   D A+ + + G   +     P+ +   P E+++
Sbjct: 163 ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIAN 222
Query: 232 LVAFLCFPAASYITGQVICVDGGMTVN 258
            + FL    AS+IT Q I VDGG T+ 
Sbjct: 223 TILFLASDLASHITLQDIVVDGGSTLG 249

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 110 EYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ 169
           E    + S   ++ + LS+L    L     G I+ I+S     + P +  Y    G +  
Sbjct: 97  EEFDYILSVGLKAPYELSRLCRDEL-IKNKGRIINIASTRAFQSEPDSEAYASAKGGIVA 155
Query: 170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEV 229
           LT  L      D +  N IAPG I  +          + +  +   +  P  + G P ++
Sbjct: 156 LTHALAMSLGPD-VLVNCIAPGWINVT---------EQQEFTQEDCAAIPAGKVGTPKDI 205
Query: 230 SSLVAFLCFPAASYITGQVICVDGGMT 256
           S++V FLC     +ITG+ I VDGGM+
Sbjct: 206 SNMVLFLC--QQDFITGETIIVDGGMS 230

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP-LYGPYNGAMNQLTKHLECE 177
           N  S++ + K   P + A  +G I+ +SSVA      +   +Y     A+  LTK +  +
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD 164
Query: 178 QAKDNIRANSIAPGVIRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
             +  IR N + PG + T SL + I+      +     + R    R    +E++ L  +L
Sbjct: 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224
Query: 237 CFPAASYITGQVICVDGGMTV 257
               ++Y+TG  + +DGG ++
Sbjct: 225 ASDESAYVTGNPVIIDGGWSL 245

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 14  FITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG +RGIG +IV+ L       +++  +R++  L +  +++  +   V G + + S  
Sbjct: 6   LVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVL 65
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEAL-DTTAEYMSTLRSTNFESVFHLSKLA 130
           +Q    +   +    GK            P + + +        L   NF S+  L  +A
Sbjct: 66  KQ----LVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIA 121
Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P LK + NG +VF+SS A          YG    A+N     L  E+ +  ++A ++AP
Sbjct: 122 LPELKKT-NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEERQ--VKAIAVAP 178
Query: 191 GVIRTSLSDAIRHD 204
           G++ T +   IR +
Sbjct: 179 GIVDTDMQVNIREN 192

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 145 ISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR 202
           ++ V  +T+ PL    +Y     A+  LT+    E A   IR N ++PG+       ++ 
Sbjct: 178 VNMVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGL-------SVL 230
Query: 203 HDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
            D     + E    + P+  R    +EVS +V FLC P A YITG  I VDGG ++
Sbjct: 231 PDDMPFSVQEDYRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 144 FISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG--VIRTSLSD 199
            ++ V  +T+ PL    +Y    GA+  LT+    E A   IR N + PG  V+   +  
Sbjct: 176 IVNMVDAMTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPP 235
Query: 200 AIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           A+R D           S+ P+  R     EVS +V FLC   A Y+TG  + VDGG ++
Sbjct: 236 AVRED---------YRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSL 285

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 17/250 (6%)
Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG ++GIG A     A  GA +    R     ++E +   +  G        DL++ E 
Sbjct: 12  ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEA 71
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++L++   + F G              K   +    +   +   N  SV   +K A P 
Sbjct: 72  CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPH 131
Query: 134 L----KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGA-MNQLTKHLECEQAKDNIRANS 187
           L    KASG    ++   S+AG T             A ++ + K+      KD +R N 
Sbjct: 132 LAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNI 191
Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP---AASYI 244
           ++PG + T+   A +    +++I  G+    P+ R G  +E++   AFL F    A+ YI
Sbjct: 192 VSPGTVDTAFH-ADKTQDVRDRISNGI----PMGRFGTAEEMAP--AFLFFASHLASGYI 244
Query: 245 TGQVICVDGG 254
           TGQV+ ++GG
Sbjct: 245 TGQVLDINGG 254

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 144 FISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI 201
            I+ V  +T  PL    +Y    GA+  LT+    E A   IR N + PG+       ++
Sbjct: 195 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-------SV 247
Query: 202 RHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
             D     + EG  S+ P+  R     EVS +V FLC   A YITG  + VDGG ++
Sbjct: 248 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 304

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 144 FISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI 201
            I+ V  +T  PL    +Y    GA+  LT+    E A   IR N + PG+       ++
Sbjct: 179 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-------SV 231
Query: 202 RHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
             D     + EG  S+ P+  R     EVS +V FLC   A YITG  + VDGG ++
Sbjct: 232 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 144 FISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI 201
            I+ V  +T  PL    +Y    GA+  LT+    E A   IR N + PG+       ++
Sbjct: 176 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-------SV 228
Query: 202 RHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
             D     + EG  S+ P+  R     EVS +V FLC   A YITG  + VDGG ++
Sbjct: 229 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 285

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 144 FISSVAGVTAAPL--TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI 201
            I+ V  +T  PL    +Y    GA+  LT+    E A   IR N + PG+       ++
Sbjct: 216 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-------SV 268
Query: 202 RHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
             D     + EG  S+ P+  R     EVS +V FLC   A YITG  + VDGG ++
Sbjct: 269 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 3/191 (1%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG  I  EL   GA I   +R Q  +     E +  G      V D++ R  
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS 67
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
                +     + G+                     +    +   N + V        P+
Sbjct: 68  VAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++A  +G I+ I S+  ++  P   +Y     A+  ++  L   Q   NIR   + PGV+
Sbjct: 127 MEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGL--RQESTNIRVTCVNPGVV 184
Query: 194 RTSLSDAIRHD 204
            + L+  I H+
Sbjct: 185 ESELAGTITHE 195

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 105 LDTTAEYMSTLRSTNFE-SVFHLSKLAHPLL--KASGNGIIVFISSVAGVTAAPLTPLYG 161
           LD   E   T+   N   +VF    +    L   A  +  I+ I+SV+ V  +P    Y 
Sbjct: 126 LDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYC 185
Query: 162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI--RHDPAKNKIVEGLVSRTP 219
                +   ++ L    A+  I    + PG+IR+  + A+  ++D     I  GLV   P
Sbjct: 186 XSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYD---GLIESGLV---P 239
Query: 220 ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN 258
             R GEP+++ ++VA L      + TG VI  DGG+++ 
Sbjct: 240 XRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG 278

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 111 YMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL 170
           Y++ + ++++  V  LS    P++   G  I     S+  + +  + P YG   G M+  
Sbjct: 155 YLAAISASSYSFVSLLSHF-LPIMNPGGASI-----SLTYIASERIIPGYG---GGMSSA 205
Query: 171 TKHLECEQA--------KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR 222
              LE +          K NIR N+I+ G + +  + AI      + ++E   +  PI +
Sbjct: 206 KAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYSYNNAPIQK 262
Query: 223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
               DEV +  AFL  P AS ITG  I VD G+   G
Sbjct: 263 TLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 299

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 111 YMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL 170
           Y++ + ++++  V  LS    P++   G  I     S+  + +  + P YG   G M+  
Sbjct: 144 YLAAISASSYSFVSLLSHF-LPIMNPGGASI-----SLTYIASERIIPGYG---GGMSSA 194
Query: 171 TKHLECEQA--------KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR 222
              LE +          K NIR N+I+ G + +  + AI      + ++E   +  PI +
Sbjct: 195 KAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYSYNNAPIQK 251
Query: 223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
               DEV +  AFL  P AS ITG  I VD G+   G
Sbjct: 252 TLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 288

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 111 YMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL 170
           Y++ + ++++  V  LS    P++   G  I     S+  + +  + P YG   G M+  
Sbjct: 145 YLAAISASSYSFVSLLSHF-LPIMNPGGASI-----SLTYIASERIIPGYG---GGMSSA 195
Query: 171 TKHLECEQA--------KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR 222
              LE +          K NIR N+I+ G + +  + AI      + ++E   +  PI +
Sbjct: 196 KAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYSYNNAPIQK 252
Query: 223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
               DEV +  AFL  P AS ITG  I VD G+   G
Sbjct: 253 TLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 8/198 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           FITG T G G A     A  G  +    R +  L     E   K  +V     D+  R  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAA 83
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
               ++ +   F                  A     +   T   TN + + + ++L  P 
Sbjct: 84  XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPR 143
Query: 134 LKASGNGI-IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L A G G  IV + SVAG    P + +YG     + Q + +L C+     +R  ++ PG+
Sbjct: 144 LIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGL 203
Query: 193 IRTSLS------DAIRHD 204
             +  S      D  R+D
Sbjct: 204 CESEFSLVRFGGDQARYD 221

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 101/271 (37%), Gaps = 29/271 (10%)
Query: 11  QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR------------NQTELNERLQEWKLKG 58
           +   ITGG RG+G +    LA  GA I  C R               +L E +   +  G
Sbjct: 11  KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG 70
Query: 59  LKVTGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRST 118
            +   +  D+  R   E  +        G                    +A++   +  T
Sbjct: 71  RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI-GT 129
Query: 119 NFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
           N    F+      P +     G IV +SS+ G +A      Y      +  LTK    + 
Sbjct: 130 NLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDL 189
Query: 179 AKDNIRANSIAPGVIRTSLS------DAIRHDPAKN--KIVEGLVSR-----TPICRPGE 225
               I  N++APG I T ++        +R D  K   K VE + +       P  +P  
Sbjct: 190 VGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKP-- 247
Query: 226 PDEVSSLVAFLCFPAASYITGQVICVDGGMT 256
            +EV+  V FL   A+S+ITG V+ +D G T
Sbjct: 248 -EEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT--GSVCDLSSR 71
            +TG + GIG A+   L   G  +  C+R    + E   E K  G   T     CDLS+ 
Sbjct: 36  LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    +   + S   G             P   L  +      + + N  ++   ++ A+
Sbjct: 96  EDILSMFSAIRSQHSG-VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 154
Query: 132 PLLKASG--NGIIVFISSVAGVTAAPL--TPLYGPYNGAMNQLTKHL--ECEQAKDNIRA 185
             +K     +G I+ I+S++G    PL  T  Y     A+  LT+ L  E  +A+ +IRA
Sbjct: 155 QSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRA 214
Query: 186 NSIAPGVIRTSLSDAIRH-DPAK 207
             I+PGV+ T  +  +   DP K
Sbjct: 215 TCISPGVVETQFAFKLHDKDPEK 237

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 10  EQNYFITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQ---EWKLKGLKVTGS 64
           ++   ITG + GIG A   E   A  G +    +  + E  E L+   + +    KV  +
Sbjct: 33  KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA 92
Query: 65  VCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVF 124
             D++  E+ +  +E +   F+                       E +  +  TN  ++ 
Sbjct: 93  QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
           ++++   P+ +A  +G IV + S+AG  A P   +Y     A+   T  L  E     IR
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212
Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
              IAPG++ T  S  +R+   + +        TP+      D+V+ L+ +
Sbjct: 213 VILIAPGLVETEFS-LVRYRGNEEQAKNVYKDTTPLM----ADDVADLIVY 258

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 15/216 (6%)
Query: 49  ERLQEWKLKGLKVTGSVC----DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEA 104
           E+L+E KL+  +  G +     D+ + +  +K +E +   F G+               A
Sbjct: 41  EKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKF-GRIDILINNAAGNFICPA 99
Query: 105 LDTTAEYMSTLRSTNFESVFHLSK-LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY 163
            D +    +++ +      F+ S+ +    ++    G I+   +     A P        
Sbjct: 100 EDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAA 159
Query: 164 NGAMNQLTKHLECEQA-KDNIRANSIAPGVI-RTSLSDA--IRHDPAKNKIVEGLVSRTP 219
              +   TK L  E   K  IR N+IAPG I RT  +D   I  + AK  I        P
Sbjct: 160 KAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKRTI-----QSVP 214
Query: 220 ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM 255
           + R G P+E++ L  +LC   A+YI G     DGG 
Sbjct: 215 LGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGGQ 250

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 122 SVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
           S + L+ +AH   K     G IV  + + G  A     + G    ++    K+L  +   
Sbjct: 121 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 180
Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           DNIR N+I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    
Sbjct: 181 DNIRVNAISAGPIRTLSAKGV---GGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDL 237
Query: 241 ASYITGQVICVDGGM 255
           +S +TG+ I VD G 
Sbjct: 238 SSGVTGENIHVDSGF 252

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 122 SVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
           S + L+ +AH   K     G IV  + + G  A     + G    ++    K+L  +   
Sbjct: 142 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 201
Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           DNIR N+I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    
Sbjct: 202 DNIRVNAISAGPIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDL 258
Query: 241 ASYITGQVICVDGGM 255
           +S +TG+ I VD G 
Sbjct: 259 SSGVTGENIHVDSGF 273

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 122 SVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
           S + L+ +AH   K     G IV  + + G  A     + G    ++    K+L  +   
Sbjct: 121 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 180
Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           DNIR N+I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    
Sbjct: 181 DNIRVNAISAGPIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDL 237
Query: 241 ASYITGQVICVDGGM 255
           +S +TG+ I VD G 
Sbjct: 238 SSGVTGENIHVDSGF 252

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 122 SVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
           S + L+ +AH   K     G IV  + + G  A     + G    ++    K+L  +   
Sbjct: 125 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 184
Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           DNIR N+I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    
Sbjct: 185 DNIRVNAISAGPIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDL 241
Query: 241 ASYITGQVICVDGGM 255
           +S +TG+ I VD G 
Sbjct: 242 SSGVTGENIHVDSGF 256

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 122 SVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
           S + L+ +AH   K     G IV  + + G  A     + G    ++    K+L  +   
Sbjct: 147 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 206
Query: 181 DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           DNIR N+I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    
Sbjct: 207 DNIRVNAISAGPIRTLSAKGV---GGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDL 263
Query: 241 ASYITGQVICVDGGM 255
           +S +TG+ I VD G 
Sbjct: 264 SSGVTGENIHVDSGF 278

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 17/259 (6%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSR 71
            +TG T GIG AI   L   GA +    R +  +NE ++E + +     +   V DL + 
Sbjct: 14  LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  + ++E        K            P E  D   E    L   N  S   L++   
Sbjct: 74  QGCQDVIEKYP-----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYL 128
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
                   G ++FI+S A +  +     Y         L++ L       N+  N+I PG
Sbjct: 129 KKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPG 188
Query: 192 V-----IRTSLS-----DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
                 + T L+     + +  + A+ +  +     + I R   P+E++ LV FL  P +
Sbjct: 189 STLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLSSPLS 248
Query: 242 SYITGQVICVDGGMTVNGF 260
           S I G  + +DGG+  + F
Sbjct: 249 SAINGSALRIDGGLVRSVF 267

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 9/245 (3%)
Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLM 78
           R I   I   L   GA +I T +  + E N R     L+G +     CD+++ E+     
Sbjct: 18  RSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACF 77
Query: 79  ETVS---SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK 135
           ET+        G               E +DT+ +     ++ +  S+  +++ A  ++ 
Sbjct: 78  ETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSLTAVAREAKKVMT 137
Query: 136 ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT 195
             GN  I+ ++ + G        + G    ++    K+L  +  +  IR N+I+ G IRT
Sbjct: 138 EGGN--ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRT 195
Query: 196 SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM 255
             +  +      N I+  +  R P+ R    +EV     FL    A  +TG+ I VD G 
Sbjct: 196 LSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252
Query: 256 TVNGF 260
            + G 
Sbjct: 253 HILGL 257

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 103 EALDTTAEYMST-LRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLY 160
           + LD T+E   T +   N   V+   K   P + A G  G I+  SSV G+ A P T  Y
Sbjct: 119 DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHY 178
Query: 161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE------GL 214
                 +  L +    E  +  IR NS+ P  ++T +     H+    K+        G 
Sbjct: 179 VAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM----LHNEGTFKMFRPDLENPGP 234
Query: 215 VSRTPICR-------PG-EPDEVSSLVAFLCFPAASYITGQVICVDGG 254
               PIC+       P  EP ++S+ V F     A YITG  + +D G
Sbjct: 235 DDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 9/244 (3%)
Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLM 78
           R I   I   L   GA +I T +  + E N R     L+G +     CD+++ E+     
Sbjct: 18  RSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACF 77
Query: 79  ETVS---SIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK 135
           ET+        G               E +DT+ +     ++ +  S+  +++ A  ++ 
Sbjct: 78  ETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSLTAVAREAKKVMT 137
Query: 136 ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT 195
             GN  I+ ++ + G        + G    ++    K+L  +  +  IR N+I+ G IRT
Sbjct: 138 EGGN--ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRT 195
Query: 196 SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM 255
             +  +      N I+  +  R P+ R    +EV     FL    A  +TG+ I VD G 
Sbjct: 196 LSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252
Query: 256 TVNG 259
            + G
Sbjct: 253 HILG 256

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALD------TTAEYMSTLRSTN 119
           CD+ S ++ + L   +  ++ G             P++ L+       T E  S     +
Sbjct: 62  CDVISDQEIKDLFVELGKVWDG--LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS 119
Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
             S   L+K    ++K + N  +V ++ +    A P     G    ++    ++      
Sbjct: 120 AYSFAALAKEGRSMMK-NRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALG 178
Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
           +D I+ N+++ G I+T  +  I +     K+++     +P+ +  +  EV + VAFLC  
Sbjct: 179 EDGIKVNAVSAGPIKTLAASGISN---FKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 235
Query: 240 AASYITGQVICVDGG 254
            A+ ITG+V+ VD G
Sbjct: 236 MATGITGEVVHVDAG 250

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALD------TTAEYMSTLRSTN 119
           CD+ S ++ + L   +  ++ G             P++ L+       T E  S     +
Sbjct: 82  CDVISDQEIKDLFVELGKVWDG--LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS 139
Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
             S   L+K    ++K + N  +V ++ +    A P     G    ++    ++      
Sbjct: 140 AYSFAALAKEGRSMMK-NRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALG 198
Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
           +D I+ N+++ G I+T  +  I +     K+++     +P+ +  +  EV + VAFLC  
Sbjct: 199 EDGIKVNAVSAGPIKTLAASGISN---FKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 255
Query: 240 AASYITGQVICVDGG 254
            A+ ITG+V+ VD G
Sbjct: 256 MATGITGEVVHVDAG 270

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 66  CDLSSREQREKLMETVSSIFQGKXXXX--XXXXXXXXPKEALDTTAEYMSTLRSTNFESV 123
           CD++  E    L++T  +   GK              P   L+   E    +   N    
Sbjct: 71  CDVTKDEDVRNLVDTTIAK-HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LTPLYGPYNGAMNQLTKHLECEQAKDN 182
           F ++K A  ++  +  G IVF +S++  TA   ++ +Y     A+  LT  L  E  +  
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 183 IRANSIAPGVIRTSL-SDAIRHDPAKNKIVEGLVSRTPICRPG--EPDEVSSLVAFLCFP 239
           IR N ++P ++ + L +D    D ++   VE L  +    +      ++V+  VA+L   
Sbjct: 190 IRVNCVSPYIVASPLLTDVFGVDSSR---VEELAHQAANLKGTLLRAEDVADAVAYLAGD 246
Query: 240 AASYITGQVICVDGGMTVNGFNPTCCPNAIDH 271
            + Y++G  + +DGG T    NP   P A+ H
Sbjct: 247 ESKYVSGLNLVIDGGYTRT--NP-AFPTALKH 275

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 8/191 (4%)
Query: 14  FITGGTRGIGHAIVEELA-------GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC 66
            ITG  +GIG AI  E A        F  ++   SR   +L +   E + +G        
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITA 65
Query: 67  DLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+S      +L   +   + G                  D T E      +TN +  F L
Sbjct: 66  DISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124
Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++    L++   +G I FI+SVA   A   + +Y         L + +     K N+R  
Sbjct: 125 TQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 184
Query: 187 SIAPGVIRTSL 197
            + PG + T +
Sbjct: 185 DVQPGAVYTPM 195

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 151 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 207
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 208 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 256

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 208
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 155 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 211
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 212 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 260

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 208
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 101 PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL-KA-----SGNGIIVFISSVAGVTAA 154
           P+EA+    +++  L   NF     +S  + P L KA     S +  ++ +S +    A 
Sbjct: 104 PREAI--AGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI 161
Query: 155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGL 214
           P     G    A+    ++L        +R N+I+ G I+T  +  I+   +  KI++ +
Sbjct: 162 PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK---SFGKILDFV 218
Query: 215 VSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
            S +P+ R    ++V +  AFL    AS +T +V+ VD G   
Sbjct: 219 ESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA 261

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 208
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE 212
           A P   + G    ++    +++      + +R N+I+ G IRT  +  I+      K++ 
Sbjct: 152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLA 208
Query: 213 GLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFN 261
              + TPI R    ++V +  AFLC   ++ I+G+V+ VDGG ++   N
Sbjct: 209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 95/251 (37%), Gaps = 27/251 (10%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  G+G  +V+ L G GA +     N+    +   E   + + V     D+SS   
Sbjct: 10  LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR---HDVSSEAD 66
Query: 74  REKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +M  V     G             P +      E  S L   N ESVF   +     
Sbjct: 67  WTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125
Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTK--HLECEQAKDNIRANSIAPG 191
           +K +G G I+ ++SV+          Y     A++ LT+   L C +    IR NSI P 
Sbjct: 126 MKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD 184
Query: 192 VIRTSLSDA----------IRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
            I T +  A          + HDP  N+            R   P+ ++ LV FL    +
Sbjct: 185 GIYTPMMQASLPKGVSKEMVLHDPKLNR----------AGRAYMPERIAQLVLFLASDES 234
Query: 242 SYITGQVICVD 252
           S ++G  +  D
Sbjct: 235 SVMSGSELHAD 245

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 119 NFESVFHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE 177
           N    +  +++A P ++     G IVF SS+ G+  A     Y      ++ L + +  E
Sbjct: 149 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 208
Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPA--------KNKIVEG--LVSRTPICRP---G 224
               NIR N + P  + T +   + ++P         +N  VE   + SR     P    
Sbjct: 209 LGPRNIRVNIVCPSSVATPM---LLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYV 265
Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           EP ++S+ + FL    A YITG  + VDGG
Sbjct: 266 EPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 101/263 (38%), Gaps = 27/263 (10%)
Query: 14  FITGGTRGIGHAIVEELAGFGA---IIHTCSR---------NQTELNERLQEWKLKGLKV 61
           FITG  RG G A    LA  GA    +  C +            EL   ++  +  G ++
Sbjct: 17  FITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRI 76
Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFE 121
                D+  RE     ++  + + +              P  A D   +    +   N  
Sbjct: 77  VARQADVRDRESLSAALQ--AGLDELGRLDIVVANAGIAPMSAGD---DGWHDVIDVNLT 131
Query: 122 SVFHLSKLAHP-LLKASGNGIIVFISSVAGV----TAAPLTPLYGPYNGAMNQLTKHLEC 176
            V+H  K+A P L+K    G IV ISS AG+    +A P +  Y      +  L +    
Sbjct: 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYAN 191
Query: 177 EQAKDNIRANSIAPGVIRTSL--SDAIRHDPAKNKIVEGLVSRTPICRPGE---PDEVSS 231
             A   IR NSI P  + T +  ++  R   AK               P E   P++V++
Sbjct: 192 LLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVAN 251
Query: 232 LVAFLCFPAASYITGQVICVDGG 254
            VA+L    A YITG  + VD G
Sbjct: 252 AVAWLVSDQARYITGVTLPVDAG 274

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 8/210 (3%)
Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            +TG T G G  I       G  +    R Q    ERLQE K + G  +  +  D+ +R 
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRNRA 59
Query: 73  QREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E+++ ++ + +                + A   + E   T+  TN + + ++++   P
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119
Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +    +G I+ I S AG        +YG     + Q + +L  +     +R   I PG+
Sbjct: 120 GMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179
Query: 193 IRTSLSDAIR---HDPAKNKIVEGLVSRTP 219
           +  +    +R    D    K  +  V+ TP
Sbjct: 180 VGGTEFSNVRFKGDDGKAEKTYQNTVALTP 209

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 12/125 (9%)
Query: 139 NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS 198
            G I+  +S AG     L  +Y     A+  LT+    +  K  I  N+IAPGV+     
Sbjct: 134 GGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW 193
Query: 199 DAI---------RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           D +         R    K ++V   V   P  R G  ++++    FL    + YI  Q  
Sbjct: 194 DGVDALFARYENRPRGEKKRLVGEAV---PFGRXGTAEDLTGXAIFLASAESDYIVSQTY 250
Query: 250 CVDGG 254
            VDGG
Sbjct: 251 NVDGG 255

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 21/251 (8%)
Query: 15  ITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQ-EWKLKGLKVTGSVCDLSSR 71
           I GG + +G    +  A      ++H      ++   +L+ E + +G KV     DLS+ 
Sbjct: 16  IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNE 75
Query: 72  EQREKLMETVSSIFQGKXXXXXXXXXXXXPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E+  KL +     F GK             K  ++T+      + + N +  +   K A 
Sbjct: 76  EEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAA 134
Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANSI 188
             +  +G+ I +  S +A  T       Y  Y G    +   T+    E  K  I  N+I
Sbjct: 135 KHMNPNGHIITIATSLLAAYTG-----FYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189
Query: 189 APGVIRTSL--SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           APG + TS       +   A +K      S+    +  + ++++ ++ FL      +I G
Sbjct: 190 APGPMDTSFFYGQETKESTAFHK------SQAMGNQLTKIEDIAPIIKFLT-TDGWWING 242
Query: 247 QVICVDGGMTV 257
           Q I  +GG T 
Sbjct: 243 QTIFANGGYTT 253

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
           F L+      +K   +G I+FI+S A          Y       + L   L  E  + NI
Sbjct: 109 FALANAVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNI 168
Query: 184 RANSIAPGVIRTSLSDAIR-HDPAKN--KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
              +IAP  + +  S      +P K   + V  +   T + R G   E+  LV FL   +
Sbjct: 169 PVFAIAPNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGS 228
Query: 241 ASYITGQVICVDGGMTV 257
             Y+TGQV  + GG  V
Sbjct: 229 CDYLTGQVFWLAGGFPV 245

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDN 182
            F ++K A P  +    G IV  SS AG+        Y     A+    + L  E AK N
Sbjct: 126 AFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYN 185
Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I+AN+IAP + R+ ++++I   P   K+               P++V+ LV +L   A +
Sbjct: 186 IKANAIAP-LARSRMTESIMPPPMLEKL--------------GPEKVAPLVLYLS-SAEN 229
Query: 243 YITGQVICVDGGM 255
            +TGQ   V  G 
Sbjct: 230 ELTGQFFEVAAGF 242

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 245
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 246 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 173 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 225
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 226 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 173 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 225
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 226 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 245
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 246 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 245
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 246 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 173 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 225
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 226 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
           LY     A+  LT+    E A   IR N +APGV   SL      +  K+K       + 
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEEEKDK----WRRKV 245
Query: 219 PICR-PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P+ R     ++++  V FL   +A YITG +I VDGG+++
Sbjct: 246 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	367
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-122
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-121
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-119
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-75
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-71
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	7e-69
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-68
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-68
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-68
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-68
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-67
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-67
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	8e-66
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-65
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-65
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-65
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-65
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-65
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	8e-65
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-64
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-64
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-63
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-63
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-63
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-63
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-63
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-63
1xhl_A	297	Short-chain dehydrogenase/reductase family member	5e-63
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-63
4e4y_A	244	Short chain dehydrogenase family protein; structur	8e-63
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	9e-63
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-62
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-62
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-62
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-62
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-62
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	7e-62
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	8e-62
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-61
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-61
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-61
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-61
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-61
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	7e-61
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	7e-61
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-60
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-60
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-60
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-60
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-60
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-60
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-60
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-60
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-60
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-60
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	9e-60
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-59
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-59
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-59
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-59
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-59
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-59
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-59
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-58
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-58
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	8e-58
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	8e-58
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-58
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-57
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-57
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-56
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-56
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-56
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-56
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-56
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	8e-56
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-55
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-55
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-54
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-54
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-54
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-54
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-54
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-54
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-53
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-53
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-53
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-53
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-53
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-53
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-52
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-52
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-52
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-52
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	9e-52
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-51
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-51
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-51
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-51
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-51
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-51
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-51
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-51
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-50
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-50
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-50
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-50
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-49
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-49
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-49
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-49
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-49
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-49
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-49
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-49
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	7e-49
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-48
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-48
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-48
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-48
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-48
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-48
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-47
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-47
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-47
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-47
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-47
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-47
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-46
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-46
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-46
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-46
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-46
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-45
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-45
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-45
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-45
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-45
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	7e-45
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-43
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-43
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-41
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-41
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-40
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-40
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-38
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-38
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-38
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-35
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-34
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-34
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-34
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-34
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-33
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-32
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-32
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	6e-32
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-31
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-30
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-30
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-29
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-29
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	5e-29
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-28
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-27
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-27
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-25
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-25
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-22
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	7e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-22
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	3e-19
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-19
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-19
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-19
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	8e-19
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-18
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-18
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-18
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-18
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-18
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	9e-18
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	9e-18
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	6e-15
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	9e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	6e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-09
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	7e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-07
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-05
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	2e-04

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  351 bits (904), Expect = e-122
 Identities = 140/247 (56%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG++GIG+AIVEELAG GA ++TCSRN+ EL+E L+ W+ KGL V GSVCDL SR +R
Sbjct: 26  VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTER 85

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +KLM+TV+ +F GKLN+LVNNA V + KEA D T +  + +  TNFE+ +HLS++A+PLL
Sbjct: 86  DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLL 145

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           KAS NG ++F+SS+AG +A P   LY    GA+NQ+TK L CE AKDNIR NS+APGVI 
Sbjct: 146 KASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVIL 205

Query: 195 TSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T L +      P + + ++  + +TP+ R G+P EVS+L+AFLCFPAASYITGQ+I  DG
Sbjct: 206 TPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADG 265

Query: 254 GMTVNGF 260
           G T NG 
Sbjct: 266 GFTANGG 272

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  350 bits (900), Expect = e-121
 Identities = 140/247 (56%), Positives = 178/247 (72%), Gaps = 1/247 (0%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG+RGIG+ IVEELA  GA ++TCSRNQ ELN+ L +W+ KG KV  SVCDLSSR +R
Sbjct: 14  VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSER 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           ++LM TV++ F GKLN+LVNNA + + KEA D T E  S + S NFE+ +HLS LAHP L
Sbjct: 74  QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 133

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           KAS  G +VFISSV+G  A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI 
Sbjct: 134 KASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA 193

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           TSL +    DP + + +  L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDGG
Sbjct: 194 TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253

Query: 255 MTVN-GF 260
           +  N GF
Sbjct: 254 LMANCGF 260

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  344 bits (885), Expect = e-119
 Identities = 152/246 (61%), Positives = 188/246 (76%), Gaps = 4/246 (1%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGGT+GIGHAIVEE AGFGA+IHTC+RN+ ELNE L +W+ KG +VTGSVCD S R +R
Sbjct: 19  VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPER 78

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           EKLM+TVSS+F GKL++L+NN      K  LD TAE  S   STN ES +HLS+LAHPLL
Sbjct: 79  EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 138

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           KASG G I+F+SS+AGV +A +  +Y    GA+NQL ++L CE A D IRAN++AP VI 
Sbjct: 139 KASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIA 198

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T L++A+  D  K    + ++SR P+ R GEP+EVSSLVAFLC PAASYITGQ ICVDGG
Sbjct: 199 TPLAEAVYDDEFK----KVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254

Query: 255 MTVNGF 260
           +TVNGF
Sbjct: 255 LTVNGF 260

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  231 bits (593), Expect = 4e-75
 Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 5/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T  T GIG AI   LA  GA +   SR Q  ++  +   + +GL VTG+VC +   E R
Sbjct: 19  VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDR 78

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E+L+    ++  G +++LV+NAAV       +D T E    +   N ++   ++K   P 
Sbjct: 79  ERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPE 137

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G G ++ +SSV      P    Y     A+  LTK+L  E A  NIR N +APG+I
Sbjct: 138 MEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLI 197

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T+ S  +  D       E +     I R G P++ + +V+FLC   ASYITG+ + V G
Sbjct: 198 KTNFSQVLWMDK---ARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGG 254

Query: 254 GMT 256
           G  
Sbjct: 255 GTA 257

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  222 bits (568), Expect = 5e-71
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE---RLQEWKLKGLKVTGSVCDLSS 70
            +TGG  GIG  +   L   GA +    RN  +L      L+     G  +     D+++
Sbjct: 15  LVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
            ++  + ++ V++   G+L+ +V+ A  +          +E        N     ++ K 
Sbjct: 75  EDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKH 133

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A   +   G G  V ISS+A          YG    A++ L +    E     +R NSI 
Sbjct: 134 AAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIR 193

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+IRT L  AI       ++       TP+ R GE ++V+++  FL   AAS++TGQVI
Sbjct: 194 PGLIRTDLVAAITESA---ELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVI 250

Query: 250 CVDGGMTVNG 259
            VDGG  +  
Sbjct: 251 NVDGGQMLRR 260

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  215 bits (550), Expect = 7e-69
 Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 13/245 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG   V+ L   GA +   +R  ++L    +E       +     DL   +  
Sbjct: 12  VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCVDLGDWDAT 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           EK +  +     G ++LLVNNAA+ + +  L+ T E      S N  SVF +S++    +
Sbjct: 68  EKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDM 122

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
              G  G IV +SS+      P    Y    GAM  LTK +  E     IR NS+ P V+
Sbjct: 123 INRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVV 182

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T +   +  DP   +    L  R P+ +  E ++V + + FL    ++  +G  I VD 
Sbjct: 183 LTDMGKKVSADPEFAR---KLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDA 239

Query: 254 GMTVN 258
           G   +
Sbjct: 240 GYLAS 244

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  215 bits (549), Expect = 1e-68
 Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 13/243 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG   V+ L   GA +   SR Q +L+  ++E       +     DL   E  
Sbjct: 12  VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVDLGDWEAT 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E+ + +V     G ++LLVNNAAVA+ +  L+ T E        N  +V  +S++    L
Sbjct: 68  ERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            A G  G IV +SS     A     +Y    GA++ LTK +  E     IR N++ P V+
Sbjct: 123 IARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVV 182

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TS+  A   DP K K    +++R P+ +  E + V + + FL    +   TG  + V+G
Sbjct: 183 MTSMGQATWSDPHKAK---TMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG 239

Query: 254 GMT 256
           G  
Sbjct: 240 GFW 242

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  215 bits (549), Expect = 2e-68
 Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 9/250 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           ITG + GIG AI E  A  GA I   +R    L+E  +  K K G++V     D+++ E 
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + ++E+V S F G  ++LVNNA     +  ++   E           +   L++   P 
Sbjct: 72  VDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++A G G I+  +S+  V      P+Y     A+   +K L  E  KDNIR N I PG+I
Sbjct: 131 MRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLI 190

Query: 194 RTSLSDAIRHDPAKNK-------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
            T        +  K+        +        PI R   P+E+++   FLC   A+Y  G
Sbjct: 191 LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVG 250

Query: 247 QVICVDGGMT 256
               VDGGM 
Sbjct: 251 SAYFVDGGML 260

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  214 bits (547), Expect = 3e-68
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG + IG A V  LA  GA +     ++    + +++ +++G  V+  V D+++ E 
Sbjct: 17  IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTES 76

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
            +  + +V     G++++LV  A + + + +A D T          N   +F   +    
Sbjct: 77  VQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
           ++     G+IV I S++G+           YN     ++Q  + L  E A   IRAN++A
Sbjct: 136 IMLEQKQGVIVAIGSMSGLIVNRPQQQA-AYNASKAGVHQYIRSLAAEWAPHGIRANAVA 194

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           P  I T+L+      P    + +  ++ TP+ R G+PDEV+S+V FL   AAS +TG ++
Sbjct: 195 PTYIETTLTRFGMEKPE---LYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIV 251

Query: 250 CVDGGMTV 257
            VD G TV
Sbjct: 252 NVDAGFTV 259

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  213 bits (545), Expect = 7e-68
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 11/247 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG  I    A  GA +    R    L+   QE  L        V D++  E 
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVADVTDAEA 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
                    ++    +++LVN+A +A   +AL+T       + + N + +F  S+     
Sbjct: 73  MTAAAAEAEAV--APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRA 130

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           + A G G IV + S++G            Y    GA++QLT+ L  E A   +R N++AP
Sbjct: 131 MVARGAGAIVNLGSMSGTIVNRPQFAS-SYMASKGAVHQLTRALAAEWAGRGVRVNALAP 189

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G + T ++  +R  P      E  +  TP+ R GEP E+++   FL  PAASY+TG ++ 
Sbjct: 190 GYVATEMTLKMRERPELF---ETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILA 246

Query: 251 VDGGMTV 257
           VDGG TV
Sbjct: 247 VDGGYTV 253

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  212 bits (543), Expect = 2e-67
 Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 6/245 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSREQ 73
           ITG T+GIG  I    A  GA +    R+ +EL+   +   +  G  V     DL+  + 
Sbjct: 25  ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDA 84

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L    +  F G L++LVNNA ++ P+  +DT  +      + N  +   L+      
Sbjct: 85  PAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKA 143

Query: 134 LKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A+G  G I+ ++S A +   P    Y      +   TK L  E     IRANS+ P V
Sbjct: 144 MVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTV 203

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T +   +  D AK+     +++R P+ R   P EVS  V +L   AAS I G  I VD
Sbjct: 204 VLTEMGQRVWGDEAKS---APMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVD 260

Query: 253 GGMTV 257
           GG T+
Sbjct: 261 GGYTM 265

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  210 bits (538), Expect = 8e-67
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 6/242 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG  I    A  GA +     N    N  + E +  G +     CD++S ++ 
Sbjct: 16  ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL 75

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L +   S   GK+++LVNNA    PK   D            N  S FHLS+L  P +
Sbjct: 76  SALADFAISKL-GKVDILVNNAGGGGPK-PFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           + +G G+I+ I+S+A          Y     A + L +++  +  + NIR N IAPG I 
Sbjct: 134 EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAIL 193

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T    ++       +I + ++  TPI R G+P ++++   FLC PAAS+++GQ++ V GG
Sbjct: 194 TDALKSVITP----EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

Query: 255 MT 256
             
Sbjct: 250 GV 251

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  209 bits (533), Expect = 8e-66
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 4/249 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
           FITGG  GIG  I E     G      SR+   +    ++     G +      D+ +  
Sbjct: 31  FITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPP 90

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
                ++     F G++++L+N AA      A   +     T+   +    F++S++ + 
Sbjct: 91  AVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYE 149

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
                  G+IV I++  G     L    G    A++ +T+HL  E    NIR NS+APG 
Sbjct: 150 KFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGP 209

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I    ++ +R        +   V+ +P+ R G   E++  V +L  P ASY+TG V+  D
Sbjct: 210 ISG--TEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVAD 267

Query: 253 GGMTVNGFN 261
           GG  +   N
Sbjct: 268 GGAWLTFPN 276

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  207 bits (530), Expect = 2e-65
 Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG AI    A  GA +    R    + E   E    G      V DL+  E  
Sbjct: 36  VTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGA 94

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             + E +++    ++++LVNNA +     A + +      + + N ++ + LS+     +
Sbjct: 95  ANVAEELAAT--RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAM 152

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
            A G+G IV I+S+           Y     A+  LT+ L  E A   +  N++APG + 
Sbjct: 153 LAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVV 212

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T+ + A+R D  +      + +R P  R   P+++     FL   AASY+ GQV+ VDGG
Sbjct: 213 TANTAALRADDERA---AEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG 269

Query: 255 MTVN 258
              +
Sbjct: 270 WLAS 273

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  207 bits (530), Expect = 4e-65
 Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 5/248 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
           FITGG  G+G  +   L+  GA     SR    L    ++   + G KV    CD+   +
Sbjct: 30  FITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD 89

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK-LAH 131
             +  +  +  +  G  N+++NNAA          +     T+          ++  +  
Sbjct: 90  MVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK 148

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            L+KA      + I+++   T +            +  ++K L  E  K  +R N I PG
Sbjct: 149 QLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPG 208

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I+T  + +           + ++ R P  R G  +E+++L AFLC   AS+I G VI  
Sbjct: 209 PIKTKGAFSRLDPTGT--FEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKF 266

Query: 252 DGGMTVNG 259
           DGG  V  
Sbjct: 267 DGGEEVLI 274

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  206 bits (527), Expect = 4e-65
 Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 10/254 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVCDLSSRE 72
           +TGG+ GIG A VE L   GA +  C+R+   L         +  G ++  SVCD+    
Sbjct: 13  VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDAL 72

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           Q     E       G  ++LVNNA         +TT E  S      F SV H  +   P
Sbjct: 73  QVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLP 131

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L++  +  IV ++S+      P           +  L + +  E A   +R N I  G+
Sbjct: 132 QLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGL 191

Query: 193 IRTSLSDAIRHDPAKN-------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           + +           +                + P+ R G+P E +  + FL  P ++Y T
Sbjct: 192 VESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTT 251

Query: 246 GQVICVDGGMTVNG 259
           G  I V GG++ + 
Sbjct: 252 GSHIDVSGGLSRHA 265

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  206 bits (526), Expect = 6e-65
 Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 9/249 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           I+G    +G  +    A  GA +   +R    L +  ++    G +      D++   Q 
Sbjct: 16  ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQV 75

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             L++     + G++++++NNA      K   +TT E+M             L +   P 
Sbjct: 76  AHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPA 134

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+ S  G +V ++S+    +      Y     A+  +++ L  E  +  IR NS+ PG I
Sbjct: 135 LEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYI 193

Query: 194 RTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
                 +     A         I     + + + R    DEV+S + F+    AS ITGQ
Sbjct: 194 WGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQ 253

Query: 248 VICVDGGMT 256
            + V+ G  
Sbjct: 254 ALDVNCGEY 262

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  205 bits (525), Expect = 7e-65
 Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 5/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RG+G A  E LA  GA +       T L E +     KG    G   D++     
Sbjct: 14  VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAI 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E     + +     +++L+NNA +   K  ++   E    +  TN  S F +S+ A   +
Sbjct: 74  EAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRM 132

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            A  + G I+ I S+    A P    Y    G +  LT  +  E A+ NI+ N+I PG I
Sbjct: 133 IARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYI 192

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T ++ A+  D   +     + S TP  R G P+E+     FL   A+ YI GQ+I VDG
Sbjct: 193 LTDMNTALIEDKQFD---SWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDG 249

Query: 254 GMT 256
           G  
Sbjct: 250 GWL 252

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  206 bits (526), Expect = 8e-65
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 10/248 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG+RGIG  I + L   GA +  C+R+     +        G        DLSS    
Sbjct: 34  VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGA 92

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
            +L + +  +   +L++LVNNA  +               +   N  SVF   +   PLL
Sbjct: 93  RRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL 151

Query: 135 KASGN----GIIVFISSVAGVTAAPL-TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           + S +      ++ I SVAG++A       YGP   A++QL++ L  E   ++I  N IA
Sbjct: 152 RRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIA 211

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG   + ++  I +DP      E   +  P+ R G P+E+++L   L   A +Y+TG VI
Sbjct: 212 PGRFPSRMTRHIANDPQAL---EADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVI 268

Query: 250 CVDGGMTV 257
            +DGG  +
Sbjct: 269 PIDGGFHL 276

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  205 bits (524), Expect = 1e-64
 Identities = 83/248 (33%), Positives = 126/248 (50%), Gaps = 10/248 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           +TGG+RG+G  I + LA  G  +   SRN  E +E  Q+   K G++     CD+S+ E+
Sbjct: 26  VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE 85

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +KL+E V   F GKL+ +VN A +     A +   +    +   N    +++ + A  L
Sbjct: 86  VKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           L+ S N  I+ I S+         P    Y    G +  LTK L  E  +  IR N IAP
Sbjct: 145 LRESDNPSIINIGSLTVEEVTM--PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP 202

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G  RT +++A+  DP K    + ++ R P+ R G P+++  +  FL    A Y+TGQ+I 
Sbjct: 203 GWYRTKMTEAVFSDPEKL---DYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIF 259

Query: 251 VDGGMTVN 258
           VDGG T N
Sbjct: 260 VDGGWTAN 267

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  205 bits (523), Expect = 1e-64
 Identities = 60/245 (24%), Positives = 118/245 (48%), Gaps = 3/245 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG AI ++ A   +I+      +  LN+ +QE +  G +V G   D+S ++ 
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKD 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHP 132
            E+ +      +  ++++L NNA +      + + + E    + + N  S F+ S+   P
Sbjct: 71  VEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP 129

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++   G G+IV  +S+AG+        Y      +  LT+ +        IRA ++ PG 
Sbjct: 130 IMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGT 189

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           ++T++       P++  +       +   R  EP+++++++ FL    AS++ G  + VD
Sbjct: 190 VKTNIGLGSS-KPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVD 248

Query: 253 GGMTV 257
           GG+TV
Sbjct: 249 GGLTV 253

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  203 bits (518), Expect = 5e-64
 Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 17/245 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG+RGIG AI E L   G  +   SRN  E  +         L       DL  ++  
Sbjct: 7   VTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--------SLGAVPLPTDLE-KDDP 57

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           + L++       G L++LV+ AAV V K AL+ + E    +   + +  F L++ A P +
Sbjct: 58  KGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHM 116

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAPG 191
             +G G ++FI SV   TA         Y     A+  LT+ L  E A+  IR N + PG
Sbjct: 117 AEAGWGRVLFIGSVTTFTAGG-PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPG 175

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            + T  +  +R +P      E + +R P+ R   P+E++ + A LC   A Y+TGQ + V
Sbjct: 176 YVETEFTLPLRQNPELY---EPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV 232

Query: 252 DGGMT 256
           DGG  
Sbjct: 233 DGGFL 237

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  202 bits (517), Expect = 1e-63
 Identities = 75/249 (30%), Positives = 111/249 (44%), Gaps = 8/249 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG RGIG AI +  A  GA++  C                + +       DL    +R
Sbjct: 11  VTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV------AEAIGGAFFQVDLEDERER 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
            + +E  +    G++++LVNNAA+A P  AL         +   N  +  HLS LA   +
Sbjct: 65  VRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREM 123

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           +  G G IV ++SV G+ A      Y    G +  LT+ L  + A   IR N++APG I 
Sbjct: 124 RKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA 183

Query: 195 TSLSDAIRHDPAKN-KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T              +          + R G+P+EV+  V FL    AS+ITG ++ VDG
Sbjct: 184 TEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG 243

Query: 254 GMTVNGFNP 262
           GMT +    
Sbjct: 244 GMTASFMMA 252

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  202 bits (517), Expect = 2e-63
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 14/245 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A+V  L   GA +    R    +   L               DL      
Sbjct: 33  VTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGDLREAAYA 81

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           + L   V++   G+L+++VNNA V       +TT    S     N E+ F + + A PL+
Sbjct: 82  DGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLM 140

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
            A+G G IV ++S  G+   P   LY     A+  LT+ +  + A   IR N++ P  + 
Sbjct: 141 AAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVN 200

Query: 195 TSLSDAIRHDPAKN--KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           T +          +  + V  L    P+ R  EP++++ +V FL   AA Y+ G ++ V+
Sbjct: 201 TPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVN 260

Query: 253 GGMTV 257
           GG  V
Sbjct: 261 GGKAV 265

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  201 bits (515), Expect = 2e-63
 Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 8/247 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
            +TG + G G AI       G  +     +   L E  +  W     KV     D++   
Sbjct: 6   IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG 65

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEA---LDTTAEYMSTLRSTNFESVFHLSKL 129
                +      F G +++LVNNA +    EA     T  E    + + N   +F   + 
Sbjct: 66  DVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA 124

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P +   G G+IV I+SVA + A P    Y    GA+ QLTK +  + A   IR N++ 
Sbjct: 125 VLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVC 184

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I T ++      P    + + +++R P    G   +V+  V FL    A+Y+ G  +
Sbjct: 185 PGMIETPMTQWRLDQPE---LRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAAL 241

Query: 250 CVDGGMT 256
            +DG  T
Sbjct: 242 VMDGAYT 248

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  202 bits (517), Expect = 2e-63
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG      LA  GA +      +T+L          G      V DL++    
Sbjct: 16  ITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVDLTNEVSV 72

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSKLAHP 132
             L++     F G+L+++ NNAA + P + L    T +      + N      + K A P
Sbjct: 73  RALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIP 131

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L ++G G IV ISS     A  ++  Y     A+  LT+++  +  +  +R N+IAPG+
Sbjct: 132 RLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGL 191

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           +RT   +     P      +   +     R GEP E++ LV FL    A++ITGQVI  D
Sbjct: 192 VRTPRLEVGLPQPIV----DIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAAD 247

Query: 253 GGMT 256
            G+ 
Sbjct: 248 SGLL 251

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  201 bits (515), Expect = 2e-63
 Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 6/242 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG AI    A  GA +                 +  G K  G  C+++  + R
Sbjct: 17  VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHR 76

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E +++     F GK+ +LVNNA    PK   D            N  S+F LS+LA P +
Sbjct: 77  EAVIKAALDQF-GKITVLVNNAGGGGPK-PFDMPMSDFEWAFKLNLFSLFRLSQLAAPHM 134

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           + +G G I+ ISS+AG         YG    A+N LT+++  +     IR N+IAPG I+
Sbjct: 135 QKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIK 194

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T     +       +I   ++  TP+ R GE  ++++   FLC PAA++I+GQV+ V GG
Sbjct: 195 TDALATVLTP----EIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

Query: 255 MT 256
             
Sbjct: 251 GV 252

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  201 bits (513), Expect = 4e-63
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 5/249 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG+ G+G  +    A  GA +    R + +L E   E +    ++     D+ + + 
Sbjct: 10  IITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDD 69

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP- 132
            +K++E +   F G++++L+NNAA      A D +    +++ +      F+ S+     
Sbjct: 70  IQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA-KDNIRANSIAPG 191
            ++    G I+ + +     A P           +  +TK L  E   K  IR N+IAPG
Sbjct: 129 WIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG 188

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I  +          +    +  +   P+ R G P+E++ L  +LC   A+YI G  + +
Sbjct: 189 PIERTGGADKLWISEEMA--KRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTM 246

Query: 252 DGGMTVNGF 260
           DGG  ++ +
Sbjct: 247 DGGQHLHQY 255

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  202 bits (516), Expect = 5e-63
 Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 16/260 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK---VTGSVCDLSSR 71
           ITG + GIG +     A  GA +    RN+  L E  Q+    G+    +   V D++  
Sbjct: 31  ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA 90

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD---TTAEYMSTLRSTNFESVFHLSK 128
             ++ ++ T  + F GK+++LVNNA   +     +       Y  T +  NF++V  +++
Sbjct: 91  SGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFK-LNFQAVIEMTQ 148

Query: 129 LAHPLLKASGNGIIVFISS-VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
                L  +  G IV +SS VAG  A    P Y     A++Q T+    +  +  +R NS
Sbjct: 149 KTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNS 207

Query: 188 IAPGVIRTSLSDAIRHDPAKN----KIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAAS 242
           ++PG + T    A+      +      +       P+   G+P+E+++++ FL     +S
Sbjct: 208 VSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSS 267

Query: 243 YITGQVICVDGGMT-VNGFN 261
           YI GQ I  DGG T V G  
Sbjct: 268 YIIGQSIVADGGSTLVMGMQ 287

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  201 bits (514), Expect = 5e-63
 Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 5/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  GIG A  E  A  GA +     N+        E    G K  G   D+SS +  
Sbjct: 32  VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKDA 88

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E ++E  ++ + G++++LVNNA        +    E    + S N + +F  SK   P++
Sbjct: 89  ESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVM 147

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           + +G G I+  +S    +A      Y    GA++ LT+ +  + AK+ IR N++APG I 
Sbjct: 148 RRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTID 207

Query: 195 TSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +     I        K+     +R  + R G  +E++  + FL    + + TG ++ VDG
Sbjct: 208 SPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG 267

Query: 254 GMTV 257
           G ++
Sbjct: 268 GSSI 271

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  200 bits (510), Expect = 8e-63
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 22/250 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TGG++GIG A+VE L       +      Q+   E L+  K           DL+ ++
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIK----------ADLTKQQ 57

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               +++ +        + +  NA + +     D   E +  +   N  S  +  K    
Sbjct: 58  DITNVLDIIK---NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLEN 114

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            LK   +  IVF  S     A P +  Y    GA+ Q+TK L  + AK  IR N++ PG 
Sbjct: 115 NLKVGAS--IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGT 172

Query: 193 IRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           + T L   +    A N      +  +      P+ R  +P E++ LV FL    + ++TG
Sbjct: 173 VDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTG 232

Query: 247 QVICVDGGMT 256
            +I +DGG T
Sbjct: 233 GLIPIDGGYT 242

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  201 bits (514), Expect = 9e-63
 Identities = 80/253 (31%), Positives = 113/253 (44%), Gaps = 8/253 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-----WKLKGLKVTGSVCDL 68
            +TGG  GIG AIV+EL   G+ +   SR    L     E        K  +V    C++
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
            + E+   L+++    F GK+N LVNN        A   +++    +  TN    F++ K
Sbjct: 82  RNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 140

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
             +        G IV I         PL    G     +  LTK L  E A   IR N +
Sbjct: 141 AVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCV 199

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APGVI +  +    +        EG   + P  R G P+EVSS+V FL  PAAS+ITGQ 
Sbjct: 200 APGVIYSQTAVE-NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQS 258

Query: 249 ICVDGGMTVNGFN 261
           + VDGG ++   +
Sbjct: 259 VDVDGGRSLYTHS 271

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  200 bits (511), Expect = 2e-62
 Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 16/260 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSR 71
           ITG + GIG       A  GA +    R+   L E  Q     G+   +V   V D+++ 
Sbjct: 11  ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMST----LRSTNFESVFHLS 127
           + +++++ +    F GK+++LVNNA  A+P     T  +            N ++V  ++
Sbjct: 71  DGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT 129

Query: 128 KLAHPLLKASGNGIIVFISS-VAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           K   P L AS  G IV +SS VAG  A P    Y     A++Q T+    + AK  IR N
Sbjct: 130 KKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVN 188

Query: 187 SIAPGVIRTSLSDAIRHDPAKNK----IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           S++PG++ T  ++A+      ++     +       PI   G+P+ +++++ FL     S
Sbjct: 189 SVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLS 248

Query: 243 -YITGQVICVDGGMT-VNGF 260
            YI GQ I  DGG + V G 
Sbjct: 249 FYILGQSIVADGGTSLVMGT 268

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  199 bits (509), Expect = 3e-62
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 18/262 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE---RLQEWKLKGLKVTGSVCDLSSR 71
           ITG + GIG A     A  GA +    R+   L E   ++    +    V   V D+++ 
Sbjct: 11  ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHL 126
             +++++ T    F GKL++LVNNA  A+P ++   T    S        + N  SV  L
Sbjct: 71  AGQDEILSTTLGKF-GKLDILVNNAGAAIP-DSQSKTGTAQSIESYDATLNLNLRSVIAL 128

Query: 127 SKLAHPLLKASGNGIIVFISSVA-GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           +K A P L ++  G IV ISS+A G+ A P  P Y     A++Q T++   +  +  IR 
Sbjct: 129 TKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRV 187

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNK----IVEGLVSRTPICRPGEPDEVSSLVAFLC-FPA 240
           NSI+PG++ T    A+      +K     +  +    P    G+P +++ ++AFL     
Sbjct: 188 NSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKT 247

Query: 241 ASYITGQVICVDGGMT-VNGFN 261
           +SYI G  + VDGG + + G +
Sbjct: 248 SSYIIGHQLVVDGGSSLIMGLH 269

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  198 bits (506), Expect = 5e-62
 Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TGG +GIG  I E+LA  G    +    + + +  E ++  +    K      D++ +
Sbjct: 6   MVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK 65

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
              +  ++  +    G  ++LVNNA +A  K  L+ T E +  + S N  SVF   + A 
Sbjct: 66  ANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAAS 124

Query: 132 PLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
                 G  G I+  +S+A +   P+   Y     A+  LT+    E A      N+ AP
Sbjct: 125 RKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAP 184

Query: 191 GVIRTSLSDAIRHDPAKNK------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           G++ T + + I  + +K          +   S   + RP  P++V+ LV+FL    ++Y+
Sbjct: 185 GIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYV 244

Query: 245 TGQVICVDGGMTVN 258
           TGQV+ VDGGM  N
Sbjct: 245 TGQVMLVDGGMLYN 258

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  198 bits (505), Expect = 6e-62
 Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 9/246 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGGT GIG AI  +    GA +    R+     +  +       ++     D S  + 
Sbjct: 10  IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDG 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             KL +     F G ++ LVNNA +AV K   +TT      L + N + VF  ++L    
Sbjct: 69  WTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127

Query: 134 LKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRANSIAP 190
           +K  G G  I+ +SS+ G    P    Y    GA+  ++K   L+C     ++R N++ P
Sbjct: 128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I+T L D +              ++TP+   GEP++++ +  +L    + + TG    
Sbjct: 188 GYIKTPLVDDLPGAEEA----MSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFV 243

Query: 251 VDGGMT 256
           VDGG T
Sbjct: 244 VDGGYT 249

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  198 bits (505), Expect = 7e-62
 Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 11/251 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG  RGIG A  E     GA +     +     +   E    G        D++ ++  
Sbjct: 13  ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMDVTRQDSI 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           +  +        G L++LVNNAA+      ++ T E    L + N        + A   +
Sbjct: 70  DAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQM 128

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            A G  G I+ ++S AG     L  +Y     A+  LT+    +  K  I  N+IAPGV+
Sbjct: 129 IAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVV 188

Query: 194 RTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
                D +    A+       +    +    P  R G  ++++ +  FL    + YI  Q
Sbjct: 189 DGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQ 248

Query: 248 VICVDGGMTVN 258
              VDGG  ++
Sbjct: 249 TYNVDGGNWMS 259

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  198 bits (506), Expect = 8e-62
 Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 6/244 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A+   LA  G  +     +    +    +    G        D+S  +Q 
Sbjct: 34  VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQI 90

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             +++   + F G ++ LV NA V      +DTT E    + + N    +  +K A P +
Sbjct: 91  IAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRM 149

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
              G G IV +SS+AG  A   T  YG     + QL++    E     IR+N++ P  + 
Sbjct: 150 IERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVD 209

Query: 195 TSLSDAI--RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           T +        D A        +      R   P+E++ +V FL    AS ITG     D
Sbjct: 210 TPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIAD 269

Query: 253 GGMT 256
           GG  
Sbjct: 270 GGTI 273

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  197 bits (504), Expect = 1e-61
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 12/247 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG  +    A  GA +   +R+   L     E    G K     CD++  +Q
Sbjct: 36  LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQ 95

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +++ ++    G +++ V NA +   +  LD   E    ++ TN   VF  ++ A   
Sbjct: 96  VRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154

Query: 134 LKASGN-GIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
           +   G  G I+  +S++G        +   Y     A+  LTK +  E A   IR NS++
Sbjct: 155 MVDQGLGGTIITTASMSGHIINIPQQV-SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVS 213

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG IRT L + +    A          + P+ R G P+E++ L  +L   A+SY+TG  I
Sbjct: 214 PGYIRTELVEPLADYHAL------WEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDI 267

Query: 250 CVDGGMT 256
            +DGG T
Sbjct: 268 VIDGGYT 274

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  197 bits (503), Expect = 1e-61
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RG+G A    LA  G  I+   +R++    E  +E +  G+KV     ++    +
Sbjct: 9   VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAK 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +++ + +   F G+L++ VNNAA  V +  ++    +     + N +++   ++ A  L
Sbjct: 69  IKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++ +G G IV ISS+  +         G    A+  LT++L  E +   I  N+++ G I
Sbjct: 128 MEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAI 187

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T       +      ++E     TP  R  E  ++   V FL    A  I GQ I VDG
Sbjct: 188 DTDALKHFPNRE---DLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDG 244

Query: 254 GMT 256
           G +
Sbjct: 245 GRS 247

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  197 bits (502), Expect = 2e-61
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 11/252 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG++GIG AI   L   GA +     +       +   +  G  V     D++ R  
Sbjct: 16  IVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVDVTKRAS 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP- 132
            +  M+       G  +LL  NA V+  + A+D T E        N   VF  +++A   
Sbjct: 73  VDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRH 131

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L ++  G+IV  +S+A    APL   Y     A+   T+ L  E A  NIR N + PG 
Sbjct: 132 FLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGF 191

Query: 193 IRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++T++ +      A+        +    VS TP+ R  EP++V+ +V FL   AA ++TG
Sbjct: 192 VKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTG 251

Query: 247 QVICVDGGMTVN 258
           Q I V GG+ ++
Sbjct: 252 QGINVTGGVRMD 263

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  196 bits (501), Expect = 4e-61
 Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 8/244 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG T GIG A  +     GA +    R +  L+  + E    G    G   D ++  + 
Sbjct: 34  ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQADSANLAEL 90

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           ++L E V +   G++++L  NA         + T E        N + V    + A PLL
Sbjct: 91  DRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLL 149

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
               +  +V   S AG T  P   +Y     A+    ++   +     IR N+++PG   
Sbjct: 150 ARGSS--VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTE 207

Query: 195 TSLSDAIRHDPAKN--KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           T+    +          ++  L ++ P+ R G  +EV++   FL    +S++TG  + VD
Sbjct: 208 TTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVD 267

Query: 253 GGMT 256
           GG  
Sbjct: 268 GGSA 271

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  196 bits (500), Expect = 4e-61
 Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 6/245 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG + G+G ++    A   A ++      + E N  L+E K  G +      D++    
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESD 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP- 132
              L+++    F GKL++++NNA +  P  + + +    + +  TN    F  S+ A   
Sbjct: 72  VINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            ++    G ++ +SSV      PL   Y    G M  +T+ L  E A   IR N+I PG 
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I T ++     DP   +    + S  P+   GEP+E++++ A+L    ASY+TG  +  D
Sbjct: 191 INTPINAEKFADP---EQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247

Query: 253 GGMTV 257
           GGMT+
Sbjct: 248 GGMTL 252

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  196 bits (500), Expect = 4e-61
 Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 12/252 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK--LKGLKVTGSVCDLSSRE 72
           +T G+ G+G A   ELA  GA +   SRN+ +L          + G +V     D+    
Sbjct: 12  VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPG 71

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE-YMSTLRSTNFESVFHLSKLAH 131
             ++L E    +  G  ++LV +     P   ++   E +  + R     S   + + A 
Sbjct: 72  DIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYR-LLARSAVWVGRRAA 128

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +   G G +V+I SV  +       L       +  + + L  E A   +  N++ P 
Sbjct: 129 EQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPS 188

Query: 192 VIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           +I T    ++  + A+       + ++ + SR P+ R G+P+E++S+VAFL    AS+IT
Sbjct: 189 LILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFIT 248

Query: 246 GQVICVDGGMTV 257
           G VI VDGG  +
Sbjct: 249 GAVIPVDGGAHI 260

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  196 bits (500), Expect = 7e-61
 Identities = 67/250 (26%), Positives = 97/250 (38%), Gaps = 10/250 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG A     A  GA +   +RN   L E   E    G +      D+     
Sbjct: 12  IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEAL 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
            E L+E     F G L+   NNA        +   +   +  TL  TN  S F  +K   
Sbjct: 72  HEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETL-DTNLTSAFLAAKYQV 129

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSI 188
           P + A G G + F SS  G TA        PY      +  L + L  E     IR N++
Sbjct: 130 PAIAALGGGSLTFTSSFVGHTAG--FAGVAPYAASKAGLIGLVQALAVELGARGIRVNAL 187

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG   T  + A     A  +    +     + R   P+E++    +L    AS++TG  
Sbjct: 188 LPGGTDTPANFA-NLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAA 246

Query: 249 ICVDGGMTVN 258
           +  DGG +V 
Sbjct: 247 LLADGGASVT 256

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  195 bits (498), Expect = 7e-61
 Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 8/251 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG AI   L   G  +     N         E    G        D+S R+Q 
Sbjct: 7   VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQV 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              +E       G  +++VNNA VA        T E +  + + N + V    + A    
Sbjct: 67  FAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAF 125

Query: 135 KASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           K  G+ G I+   S AG    P   +Y     A+  LT+    + A   I  N   PG++
Sbjct: 126 KKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIV 185

Query: 194 RTSLSDAIRHDPAKNK------IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           +T +   I    ++               R  + R  EP++V++ V++L  P + Y+TGQ
Sbjct: 186 KTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQ 245

Query: 248 VICVDGGMTVN 258
            + +DGGM  N
Sbjct: 246 SLLIDGGMVFN 256

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  194 bits (496), Expect = 1e-60
 Identities = 52/244 (21%), Positives = 90/244 (36%), Gaps = 10/244 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T      G A VE L   G  +     +  +  ER +       +         + ++ 
Sbjct: 6   VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF------ESENPGTIALAEQKP 59

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL---DTTAEYMSTLRSTNFESVFHLSKLAH 131
           E+L++         ++ +V+N  +  P   L    T+   +  +          L + A 
Sbjct: 60  ERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             L+A+G   ++FI+S  G       PLYGP   A   L +      ++D I   +I P 
Sbjct: 119 APLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPN 178

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
                            ++ E +    P+ R G PDE+ +L+ FL    A+ I GQ    
Sbjct: 179 FFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAF 238

Query: 252 DGGM 255
            GG 
Sbjct: 239 TGGY 242

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  195 bits (497), Expect = 1e-60
 Identities = 72/244 (29%), Positives = 104/244 (42%), Gaps = 10/244 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG RG+G     +    GA +        E     +E    G        D++  E  
Sbjct: 10  ITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLDVTIEEDW 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           ++++      F G ++ LVNNA ++        + E    +   N   VF   K   P +
Sbjct: 67  QRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAM 125

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           K +G G IV ISS AG+    LT  YG     +  L+K    E   D IR NS+ PG+  
Sbjct: 126 KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY 185

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPG-EPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T ++          +  EG    TP+ R G EP E++  V  L    +SY+TG  + VDG
Sbjct: 186 TPMTAETG-----IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG 240

Query: 254 GMTV 257
           G T 
Sbjct: 241 GWTT 244

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  194 bits (496), Expect = 2e-60
 Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 18/249 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+ GIG A+V+ L  +GA + + S ++         +K           D+++ E+
Sbjct: 18  IVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------IDVTNEEE 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++ +E  +  + G++++LVNNA +        T  E    +   N    + ++K   P+
Sbjct: 68  VKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           + A G+G I+ I+SV    A      Y     A+  LT+ +  + A   IR N++ PG I
Sbjct: 127 MLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTI 185

Query: 194 RTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
            T +                 + +E    + P+ R G P+EV+ +VAFL    +S+ITG 
Sbjct: 186 MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGA 245

Query: 248 VICVDGGMT 256
            + VDGG+ 
Sbjct: 246 CLTVDGGLL 254

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  193 bits (494), Expect = 2e-60
 Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 8/243 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GGT G+G A V  L   GA +    RN++ +    +E    G +V     D++   + 
Sbjct: 13  VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSDIADLNEI 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             L         G ++LL  NA V+  +     +        + N +  F   +   PL+
Sbjct: 70  AVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI 128

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           +  G+  IVF SSVA     P   +Y     A+      L  E     IR NS++PG I 
Sbjct: 129 REGGS--IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFID 186

Query: 195 TSLSDAIRHDPAKN-KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           T          A+  +      + TP+ R G  DEV+  V FL F  A++ TG  + VDG
Sbjct: 187 TPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDG 245

Query: 254 GMT 256
           G+ 
Sbjct: 246 GLG 248

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  194 bits (495), Expect = 3e-60
 Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 7/249 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSR 71
            ITGG  G+G A    LA  GA +     +   L              +V  +V D+S  
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLA 130
            Q E  +   +  F G+++   NNA +   +      TA     + S N   VF   +  
Sbjct: 77  AQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV 135

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             +++  G+G++V  +SV G+        Y      +  LT++   E  +  IR N+IAP
Sbjct: 136 LKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP 195

Query: 191 GVIRTSLSDAI---RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           G I T + +            K  E  +   P  R GE  E++++VAFL    ASY+   
Sbjct: 196 GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNAT 255

Query: 248 VICVDGGMT 256
           V+ +DGG +
Sbjct: 256 VVPIDGGQS 264

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  193 bits (493), Expect = 3e-60
 Identities = 75/249 (30%), Positives = 103/249 (41%), Gaps = 9/249 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T GIG  I + LA  GA I             L E    G+K      DLS   Q
Sbjct: 8   LVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPADLSDVAQ 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L       F G +++LVNNA +           E    + + N  +VFH ++LA P 
Sbjct: 66  IEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++A   G I+ I+SV G+  +     Y      +  LTK +  E A  N+  N+I PG +
Sbjct: 125 MRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWV 184

Query: 194 RTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
            T L      D A N         + L  + P      P+ +  LV FLC  A S + G 
Sbjct: 185 LTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGA 244

Query: 248 VICVDGGMT 256
              VDGG  
Sbjct: 245 AWNVDGGWL 253

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  193 bits (494), Expect = 4e-60
 Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 15/253 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
            +TGG RGIG A    +A  GA +    R+  +  E  ++  K  G+K     CD+S+ +
Sbjct: 18  IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD 77

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK-LAH 131
              K ++ + +   G ++ L+ NA V+V K A + T E  + +   N   VF+  + +A 
Sbjct: 78  IVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 136

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGP----YN---GAMNQLTKHLECEQAKDNIR 184
             L+    G IV  SS++       +         YN    A + L K L  E A   IR
Sbjct: 137 LWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 196

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N+++PG + T  +  +        I +   S  P+ R  +P+E++     L    A+Y+
Sbjct: 197 VNALSPGYVNTDQTAHMDKK-----IRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYM 251

Query: 245 TGQVICVDGGMTV 257
           TG    +DGG  +
Sbjct: 252 TGGEYFIDGGQLI 264

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  193 bits (492), Expect = 4e-60
 Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T   +GIG A     A  GA +     N+     +LQE + K   +   V D++ ++Q
Sbjct: 10  ILTAAAQGIGQAAALAFAREGAKVIATDINE----SKLQELE-KYPGIQTRVLDVTKKKQ 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++    V      +L++L N A        LD   +      + N  S++ + K   P 
Sbjct: 65  IDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPK 119

Query: 134 LKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A  +G I+ +SSVA  V       +Y     A+  LTK +  +  +  IR N + PG 
Sbjct: 120 MLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGT 179

Query: 193 IRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           + T SL + I+      +     + R    R    +E++ L  +L    ++Y+TG  + +
Sbjct: 180 VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVII 239

Query: 252 DGGMTV 257
           DGG ++
Sbjct: 240 DGGWSL 245

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  192 bits (491), Expect = 7e-60
 Identities = 64/272 (23%), Positives = 93/272 (34%), Gaps = 54/272 (19%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
             I+G   GIG A  + L   G  I        E+                 + DLS+ E
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
            R++ +  V +     ++ LV  A +    + L             N+     L     P
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVS-------VNYFGATELMDAFLP 99

Query: 133 LLKASGNGIIVFISSVAGVTAAPL-------------------------TPLYGPYN--- 164
            LK       V ISSVA    A                                 Y    
Sbjct: 100 ALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK 159

Query: 165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPG 224
            A+    +       +  +R N+IAPG   T L  A   DP   + +       P+ R  
Sbjct: 160 NALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI--AKFVPPMGRRA 217

Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMT 256
           EP E++S++AFL  PAASY+ G  I +DGG+ 
Sbjct: 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  193 bits (492), Expect = 7e-60
 Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 12/251 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   G G  + +  A  GA +    R++        E    G        D+S     
Sbjct: 14  ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADV 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           +  +E   S F GK+++LVNNA +    + A     E    +   N   V+ ++    P 
Sbjct: 71  DAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPH 129

Query: 134 LKASGNG----IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
            K +G      +I+ ++S       P    Y    G +  +TK L  E A   IR  ++ 
Sbjct: 130 FKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN 189

Query: 190 PGVIRTSL-SDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           P    T L +  +  D  + +  +      P+ R  +PD+++   AFLC P AS ITG  
Sbjct: 190 PVAGETPLLTTFMGEDSEEIR--KKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVA 247

Query: 249 ICVDGGMTVNG 259
           + VDGG ++ G
Sbjct: 248 LDVDGGRSIGG 258

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  192 bits (491), Expect = 9e-60
 Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 13/253 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG    IG A    LA  G  I     N+  L +     + KG++    VCD++S E 
Sbjct: 11  LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               +++V   F GK++ L NNA          D  ++  + + + N    FH+ K    
Sbjct: 71  VIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 129

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +     G IV  +S+AGV   P    YG   GA+  LT+    + A  NIR N+I+PG 
Sbjct: 130 QMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY 189

Query: 193 IRTSLSDAIRHDPAKN-----------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           +        + +                + + ++   P+ R G+ +E+  +VAFL    +
Sbjct: 190 MGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDS 249

Query: 242 SYITGQVICVDGG 254
           S++TG  + + GG
Sbjct: 250 SFMTGVNLPIAGG 262

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  193 bits (492), Expect = 1e-59
 Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 10/252 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVCDLSSR 71
            ITG T GIG AI   LA  GA I        +    + +    L    V     D++  
Sbjct: 29  VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP 88

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
            +   +M  V+  F G  ++LVNNA V   ++  D   E    + + N  S FH  + A 
Sbjct: 89  SEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAI 147

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+P    Y      +  LTK +  E A+  +  NSI PG
Sbjct: 148 PPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPG 207

Query: 192 VIRTSLSDAIRHDPAKN-------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            + T L +    D A+         I E ++   P  +    ++V+SL  +L    A+ I
Sbjct: 208 YVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQI 267

Query: 245 TGQVICVDGGMT 256
           TG  + +DGG T
Sbjct: 268 TGTHVSMDGGWT 279

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  193 bits (492), Expect = 1e-59
 Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 12/254 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG A    LA  G  +    R +TE+ E   E    G +      D+S   Q
Sbjct: 32  LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQ 91

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
               +  +   F G L+++V NA +      +D     E+  T+ + N    F    L  
Sbjct: 92  MRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETI-AVNLRGTFLTLHLTV 149

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSI 188
           P LK  G G IV +SS+ G      TP    Y     A   + + L  E  K +IR N++
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFT-TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208

Query: 189 APGVIRTSLSDAI--RHDPAKNKIVEGLVSRTPIC--RPGEPDEVSSLVAFLCFPAASYI 244
            PG I T++SD    RH+      VE    + PI   +PG  ++V+ L+ FL    A ++
Sbjct: 209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHV 268

Query: 245 TGQVICVDGGMTVN 258
           TG  + +DGG  + 
Sbjct: 269 TGSPVWIDGGQGLL 282

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  192 bits (489), Expect = 2e-59
 Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 19/250 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG + GIG AI E     G+ +   S +                K     CD+++ +Q
Sbjct: 12  IVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQ 60

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++ +   + G +++LVNNA +    +    +      +   N    ++ SK A P 
Sbjct: 61  VKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +  S +  IV ISSV           Y     A+  LTK +  + A   +R N++ P  I
Sbjct: 120 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATI 178

Query: 194 RTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
            T L          +      K +       P+ R G+P EV+S VAFL    AS+ITG 
Sbjct: 179 DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGT 238

Query: 248 VICVDGGMTV 257
            + VDGG+++
Sbjct: 239 CLYVDGGLSI 248

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  192 bits (490), Expect = 2e-59
 Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 13/247 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG A+ E  A  GA +     +     +     K  G+      C++S  +  
Sbjct: 39  VTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSV 98

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL--DTTAEYMSTLRSTNFESVFHLSKLAHP 132
           E+ +      F G +++ V NA V   +         +  + + S +   V++ S     
Sbjct: 99  EETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGK 157

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
           + K +G G ++  SS++G           PYN    A   L K L  E A    R N+I+
Sbjct: 158 IFKKNGKGSLIITSSISGKIVNIPQLQ-APYNTAKAACTHLAKSLAIEWAP-FARVNTIS 215

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG I T ++D    D     +       TP+ R G   E+     +L   A+++ TG  +
Sbjct: 216 PGYIDTDITDFASKD-----MKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDV 270

Query: 250 CVDGGMT 256
            +DGG T
Sbjct: 271 VIDGGYT 277

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  191 bits (488), Expect = 2e-59
 Identities = 72/246 (29%), Positives = 105/246 (42%), Gaps = 11/246 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A  E LA  GA +     N        ++    G        D+S  E  
Sbjct: 14  VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESA 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP---KEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           + + +   + F G ++ LVNNAA+         L    EY     S N +     ++  +
Sbjct: 74  KAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVY 132

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +   G G IV  SS A    +     YG     +N LT+ L  E    NIR N+IAPG
Sbjct: 133 KKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSRELGGRNIRINAIAPG 189

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T  +          ++V+ +V   P+ R G PD++  +  FL    AS+ITGQ+  V
Sbjct: 190 PIDTEANRTTTPK----EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNV 245

Query: 252 DGGMTV 257
           DGG  +
Sbjct: 246 DGGQII 251

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  190 bits (486), Expect = 4e-59
 Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 18/257 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TG +RGIG +IV+ L       +++  +R++  L +  +++   G +    V D++   
Sbjct: 7   VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDS 63

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLA 130
             ++L+        GK++ LV NA V  P + ++      +       NF S+  L  +A
Sbjct: 64  VLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYD-INFFSIVSLVGIA 121

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            P LK +  G +VF+SS A          YG    A+N     L  E  +  ++A ++AP
Sbjct: 122 LPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAP 178

Query: 191 GVIRTSLSDAIRHDPAKNKI----VEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYIT 245
           G++ T +   IR +   + +    ++         +  +    +++ A L        + 
Sbjct: 179 GIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVN 238

Query: 246 GQVICVDGGMTVNGFNP 262
           GQ +  +    +  F P
Sbjct: 239 GQYLSYNDPA-LADFMP 254

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  191 bits (487), Expect = 4e-59
 Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 19/256 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK--VTGSVCDLSSR 71
            +TG T GIG AI   L   GA +    R +  +NE ++E + +     +   V DL + 
Sbjct: 14  LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEYMSTLRSTNFESVFHLSKLA 130
           +  + ++E        K+++L+NN  +  P E  D    ++       N  S   L++  
Sbjct: 74  QGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFE-VNIMSGVRLTRSY 127

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
              +     G ++FI+S A +  +     Y         L++ L       N+  N+I P
Sbjct: 128 LKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMP 187

Query: 191 GVIRTSLSDAIRHDPAKN----------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           G   T   + + +    N          + ++     + I R   P+E++ LV FL  P 
Sbjct: 188 GSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPL 247

Query: 241 ASYITGQVICVDGGMT 256
           +S I G  + +DGG+ 
Sbjct: 248 SSAINGSALRIDGGLV 263

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  190 bits (484), Expect = 8e-59
 Identities = 74/252 (29%), Positives = 107/252 (42%), Gaps = 10/252 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVCDLSSR 71
            +TG T GIG  I   LA  GA I           E+++       G+KV     DLS  
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    L++       G++++LVNNA +       D   E    + + N  +VFH +  A 
Sbjct: 68  EAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+     Y      +   TK    E A   I AN+I PG
Sbjct: 127 PHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186

Query: 192 VIRTSLSDAIRHDPAKN-------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            +RT L +      A+           E L  + P  +   P+++     FL   AA+ I
Sbjct: 187 WVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQI 246

Query: 245 TGQVICVDGGMT 256
           TG  + VDGG T
Sbjct: 247 TGTTVSVDGGWT 258

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  190 bits (485), Expect = 1e-58
 Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 17/261 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  G+G A+V+     GA +    ++   L E        G    G V D+ S + +
Sbjct: 10  ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSLQDQ 66

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----STNFESVFHLSKL 129
           ++  E   + F GK++ L+ NA +     AL    E             N +   H  K 
Sbjct: 67  KRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKA 125

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P L +S  G +VF  S AG       PLY     A+  L + +  E A  ++R N +A
Sbjct: 126 CLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVNGVA 183

Query: 190 PGVIRTSLSDAI-----RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS-Y 243
           PG + T L             +   + + L S  PI R    +E +    F      S  
Sbjct: 184 PGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLP 243

Query: 244 ITGQVICVDGGMTVNGFNPTC 264
            TG ++  DGGM V GF    
Sbjct: 244 ATGALLNYDGGMGVRGFLTAA 264

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  188 bits (479), Expect = 4e-58
 Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 13/254 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T      G      L+  G  +     +  + +E      L+    T       S ++ 
Sbjct: 6   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSEQEP 59

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAHP 132
            +L+E V+S + G++++LV+N   A   + +D     +Y   +        F L      
Sbjct: 60  AELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAV-EALQIRPFALVNAVAS 117

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            +K   +G I+FI+S            Y         L   L  E  + NI   +I P  
Sbjct: 118 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 177

Query: 193 IRTSLSDAIRHDPAKN---KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           + +  S             + V  +   T + R G   E+  LVAFL   +  Y+TGQV 
Sbjct: 178 LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVF 237

Query: 250 CVDGGMTVNGFNPT 263
            + GG  +    P 
Sbjct: 238 WLAGGFPMIERWPG 251

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  188 bits (479), Expect = 8e-58
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 9/245 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG RGIG  IV      GA +  C ++++      QE           +CD++  +  
Sbjct: 14  VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCDVTQEDDV 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           + L+      F G+L+ +VNNA    P +   +T+A+    L   N    + L+KLA P 
Sbjct: 70  KTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY 128

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+ S  G ++ ISS+ G         Y    GA+  +TK L  +++   +R N I+PG I
Sbjct: 129 LRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNI 187

Query: 194 RTSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T L + +    P     +   +   P+ R G+P EV +   FL    A++ TG  + V 
Sbjct: 188 WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVT 246

Query: 253 GGMTV 257
           GG  +
Sbjct: 247 GGAEL 251

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  187 bits (478), Expect = 8e-58
 Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 21/247 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           ITG ++ +G      L   G   II         + E      L+         D S   
Sbjct: 32  ITGASQRVGLHCALRLLEHGHRVIIS-YRTEHASVTE------LRQAGAVALYGDFSCET 84

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
                ++ + +     L  +V+NA+  + +   +    +       +  + + ++    P
Sbjct: 85  GIMAFIDLLKTQT-SSLRAVVHNASEWLAETPGEEADNFTRMFS-VHMLAPYLINLHCEP 142

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           LL AS    IV IS       +     Y      +  LT       A   ++ N IAP +
Sbjct: 143 LLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-PLVKVNGIAPAL 201

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           +          D A  +     ++++ +      + +   + +L    ++Y+TG  + V+
Sbjct: 202 LMFQP-----KDDAAYR--ANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTVN 252

Query: 253 GGMTVNG 259
           GG  V G
Sbjct: 253 GGRHVKG 259

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  187 bits (478), Expect = 8e-58
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG ++GIG  +V         +   SR+                 +     D+S  E  
Sbjct: 33  ITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS---------ADPDIHTVAGDISKPETA 83

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           ++++      F G+++ LVNNA V + K  ++ T E        N    FH+++ A   +
Sbjct: 84  DRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEM 142

Query: 135 KASGNGIIVFISSVAGVTAAPLTP--LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
              G+G IV I++          P  L     G +N +T+ L  E ++  +R N+++PGV
Sbjct: 143 LKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGV 202

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           I+T +  A        +    L    P+ R GE  +V   V +L    A +ITG+++ VD
Sbjct: 203 IKTPMHPA--------ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVD 252

Query: 253 GGMTVNGF 260
           GG     +
Sbjct: 253 GGQNAGRW 260

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  187 bits (477), Expect = 1e-57
 Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 7/248 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  G+G  +V+ L G GA +     N+    +   E    G +      D+SS   
Sbjct: 10  LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEAD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +M  V     G LN+LVNNA + +P +      E  S L   N ESVF   +     
Sbjct: 67  WTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRANSIAPG 191
           +K +G G I+ ++SV+          Y     A++ LT+   L C +    IR NSI P 
Sbjct: 126 MKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD 184

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T +  A        ++V          R   P+ ++ LV FL    +S ++G  +  
Sbjct: 185 GIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHA 244

Query: 252 DGGMTVNG 259
           D  +   G
Sbjct: 245 DNSILGMG 252

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  187 bits (477), Expect = 1e-57
 Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 14/243 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ++GG RG+G + V  +   GA +        E      E             D++   Q
Sbjct: 11  LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQ 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++T  + F G L++LVNNA +       D        +   N   VF   +     
Sbjct: 68  WKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K +G G I+ ISS+ G+        Y     A+  LTK    E     IR NSI PG++
Sbjct: 127 MKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T ++D +  D          + +T + R  EP EVS+LV +L    +SY TG    VDG
Sbjct: 187 KTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG 236

Query: 254 GMT 256
           G  
Sbjct: 237 GTV 239

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  185 bits (471), Expect = 1e-56
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 8/244 (3%)

Query: 15  ITGGT-RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSRE 72
           +T     GIG          GA +     ++  L E   +    GL +V   VCD++S E
Sbjct: 27  VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTE 86

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             + L+        G+L++LVNNA +      +D T E    + +    SV   ++ A  
Sbjct: 87  AVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALR 145

Query: 133 -LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
                   G+IV  +SV G  A      Y      +  LT+    E  +  +R N+++P 
Sbjct: 146 YFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPS 205

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           + R    +         ++++ L S     R  EP EV++ +AFL    +SY+TG+V+ V
Sbjct: 206 IARHKFLEKTSSS----ELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSV 261

Query: 252 DGGM 255
               
Sbjct: 262 SSQR 265

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  183 bits (466), Expect = 3e-56
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 18/251 (7%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG+A        GA +    +  T+          +       V D++   Q 
Sbjct: 12  VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVMDVADAAQV 61

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEYMSTLRSTNFESVFHLSKLAHPL 133
            ++ + + +    +L+ LVN A +         +  ++  T  + N    F+L +     
Sbjct: 62  AQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTF-AVNVGGAFNLFQQTMNQ 119

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            +    G IV ++S A  T       YG    A+  L   +  E A   +R N ++PG  
Sbjct: 120 FRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGST 179

Query: 194 RTSLSDAIRHDPAK-----NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            T +   +               E      P+ +   P E+++ + FL    AS+IT Q 
Sbjct: 180 DTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQD 239

Query: 249 ICVDGGMTVNG 259
           I VDGG T+  
Sbjct: 240 IVVDGGSTLGA 250

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  182 bits (465), Expect = 6e-56
 Identities = 73/242 (30%), Positives = 105/242 (43%), Gaps = 6/242 (2%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG AI E  A  GA I           E     +  G +V    CD+S     
Sbjct: 12  ITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDV 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E   + V S F G+ ++LVNNA +       + T E        N +S F ++K   P +
Sbjct: 70  EAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGM 128

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           K +G G I+ ++S            Y     A    T+ L  +  KD I  N+IAP ++R
Sbjct: 129 KRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVR 188

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T+ ++A       + +         I R   P +++   AFL    AS+ITGQ + VDGG
Sbjct: 189 TATTEASALSAMFDVLPN---MLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245

Query: 255 MT 256
           M 
Sbjct: 246 MV 247

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  182 bits (465), Expect = 6e-56
 Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 15/253 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           + G  R IG A     A  GA ++ T +         + E +  G        DL++  +
Sbjct: 13  VAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAE 72

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHP 132
            E  +   +  F G+++ LV+ A   + ++ + +    +   +   N  S+F  +K A P
Sbjct: 73  VEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALP 131

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
            +   G   IV  SS AG       P    Y    GA+   T+ L  E     IR N++ 
Sbjct: 132 KMAKGGA--IVTFSSQAGRDGGG--PGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVC 186

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+I T+  D       K ++ E +   T + R G  ++V+ LVAFL    A+Y+TG   
Sbjct: 187 PGMISTTFHDTF----TKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACY 242

Query: 250 CVDGGMTVNGFNP 262
            ++GG+  +  + 
Sbjct: 243 DINGGVLFSEGHH 255

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  182 bits (465), Expect = 7e-56
 Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 11/247 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI + LA  GA +       + E  E + E +  G        +L S   
Sbjct: 12  VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHG 71

Query: 74  REKLMETVSSIFQ-----GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
            E L  ++ +  Q      K ++L+NNA +       +TT ++   + S N ++ F + +
Sbjct: 72  VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ 131

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A   L+ +    I+ ISS A   + P    Y    GA+N +T  L  +     I  N+I
Sbjct: 132 QALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAI 189

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG ++T ++  +  DP    + +   + +   R GE ++++   AFL  P + ++TGQ+
Sbjct: 190 LPGFVKTDMNAELLSDP---MMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQL 246

Query: 249 ICVDGGM 255
           I V GG 
Sbjct: 247 IDVSGGS 253

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  182 bits (464), Expect = 8e-56
 Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 17/252 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG ++GIG A     A  GA +     +    ++E +   +  G        DL++ E 
Sbjct: 12  ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEA 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
            ++L++   + F G +++L+NNA   V ++ L       Y + +   N  SV   +K A 
Sbjct: 72  CQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD-ANIRSVVMTTKFAL 129

Query: 132 PLLKASGN-----GIIVFISSVAGVTA-APLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           P L A+         ++   S+AG T   P   LYG     ++ + K+      KD +R 
Sbjct: 130 PHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRF 189

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS-YI 244
           N ++PG + T+             + + + +  P+ R G  +E++    F     AS YI
Sbjct: 190 NIVSPGTVDTAFHADK-----TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYI 244

Query: 245 TGQVICVDGGMT 256
           TGQV+ ++GG  
Sbjct: 245 TGQVLDINGGQY 256

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  181 bits (462), Expect = 2e-55
 Identities = 69/267 (25%), Positives = 97/267 (36%), Gaps = 46/267 (17%)

Query: 13  YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
             ITG   GIG A+ E LA  G  +    R Q ++                   DLS+  
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTPG 46

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKE---------------ALDTTAEYMSTLR- 116
            RE  +  V     G L+ LV  A V V                   LD  AE +S  + 
Sbjct: 47  GRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQ 106

Query: 117 ----STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQ 169
                    +         P+++A   G       +A          +  Y     A+  
Sbjct: 107 PAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT----HLAYAGSKYAVTC 162

Query: 170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEV 229
           L +    + A   +R N +APG + T L  A + DP   +         P+ R  EP EV
Sbjct: 163 LARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGE--STRRFVAPLGRGSEPREV 220

Query: 230 SSLVAFLCFPAASYITGQVICVDGGMT 256
           +  +AFL  P AS+I G V+ VDGGM 
Sbjct: 221 AEAIAFLLGPQASFIHGSVLFVDGGMD 247

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  181 bits (462), Expect = 2e-55
 Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 15/249 (6%)

Query: 15  ITG--GTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSS 70
           +TG  G +G+G       A  GA +  T +       E ++E  K  G+K     C + S
Sbjct: 25  VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDS 84

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            E  EKL++ V + F G+++  + NA        LD + E  + +   +    FH +K  
Sbjct: 85  YESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAV 143

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANS 187
               K  G G +V  +S++G  A         YN        + + L  E      R NS
Sbjct: 144 GHHFKERGTGSLVITASMSGHIA-NFPQEQTSYNVAKAGCIHMARSLANEWRD-FARVNS 201

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+PG I T LSD +       +  +   S  P+ R G   E+     +    A++Y TG 
Sbjct: 202 ISPGYIDTGLSDFV-----PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGA 256

Query: 248 VICVDGGMT 256
            + +DGG T
Sbjct: 257 DLLIDGGYT 265

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  180 bits (458), Expect = 1e-54
 Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 8/242 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI   LA  G  ++   +       E   + +  G K   +  D+S    
Sbjct: 32  VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAA 91

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L  T    F G +++LVNNA +       +T       + + N +  F+  + A   
Sbjct: 92  VRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR 150

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+  G   I+ +S+       P   +Y      +  +T  L  E    +I  N++APG  
Sbjct: 151 LRVGGR--IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPT 208

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T L    + D    ++ +      P+ R G P +++  VAFL  P  +++ GQV+  +G
Sbjct: 209 ATDLFLEGKSD----EVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG 264

Query: 254 GM 255
           G+
Sbjct: 265 GI 266

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  179 bits (457), Expect = 2e-54
 Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 11/250 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TGG RGIG  I   LA  G  I  T   +   +   + E    G +V     DL+   
Sbjct: 33  IVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS 92

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEA--LDTTAEYMSTLRSTNFESVFHLSKLA 130
             +  ++ V + F G+++ LVNNA +A       LD   E   T+   N       ++  
Sbjct: 93  SHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAV 151

Query: 131 -HPLLKAS--GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
              +L +    +  I+ I+SV+ V  +P    Y      +   ++ L    A+  I    
Sbjct: 152 LKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFE 211

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           + PG+IR+ ++ A+        I  GLV   P+ R GEP+++ ++VA L      + TG 
Sbjct: 212 VRPGIIRSDMTAAVS-GKYDGLIESGLV---PMRRWGEPEDIGNIVAGLAGGQFGFATGS 267

Query: 248 VICVDGGMTV 257
           VI  DGG+++
Sbjct: 268 VIQADGGLSI 277

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  178 bits (455), Expect = 2e-54
 Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 12/245 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   GIG A ++  A  GA +    R +  L E +        +    V D+S  +  
Sbjct: 11  VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAV 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
           E +       F G+L+ + + A VA    + +   E    +   N    F +++ A  +L
Sbjct: 68  EAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL 126

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           +  G+  +V   SVAG+ A  L   Y      +  L + L  E A+  +R N + PG+I+
Sbjct: 127 EEGGS--LVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQ 183

Query: 195 TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
           T ++  +          E  V  +P+ R G P+EV+    FL    ++YITGQ + VDGG
Sbjct: 184 TPMTAGL-----PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 238

Query: 255 MTVNG 259
            ++ G
Sbjct: 239 RSIVG 243

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  178 bits (455), Expect = 3e-54
 Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 12/263 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  GIG    +    +GA +           +           ++   CD++  E  
Sbjct: 21  ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDV 79

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             L++T  +   GKL+++  N  V    P   L+   E    +   N    F ++K A  
Sbjct: 80  RNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR 138

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
           ++  +  G IVF +S++  TA         Y     A+  LT  L  E  +  IR N ++
Sbjct: 139 VMIPAKKGSIVFTASISSFTAGEGVSH--VYTATKHAVLGLTTSLCTELGEYGIRVNCVS 196

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           P ++ + L   +    +         +          ++V+  VA+L    + Y++G  +
Sbjct: 197 PYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNL 256

Query: 250 CVDGGMTVNGFNPTCCPNAIDHL 272
            +DGG T    NP   P A+ H 
Sbjct: 257 VIDGGYTRT--NPA-FPTALKHG 276

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  178 bits (454), Expect = 4e-54
 Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 17/253 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + GIG A+   LA  G  ++ C+R+   ++  +   +  G  V GS CD++S ++ 
Sbjct: 29  VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEV 88

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL- 133
              +      F G + +LVN+A      E  D      + +  TN   VF +++      
Sbjct: 89  HAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAG 147

Query: 134 --LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANSI 188
              +A G G IV I+S  G           PY  +   +   TK +  E AK  I  N++
Sbjct: 148 GMREA-GWGRIVNIASTGGKQG---VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAV 203

Query: 189 APGVIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
            PG + T +++ +R   A++      ++ E   ++ P+ R   P+EV+ LV +L   AA+
Sbjct: 204 CPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAA 263

Query: 243 YITGQVICVDGGM 255
            IT Q + V GG+
Sbjct: 264 SITAQALNVCGGL 276

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  178 bits (453), Expect = 8e-54
 Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 20/262 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII-------------HTCSRNQTELNERLQEWKLKGLK 60
           FITG  RG G A    +A  GA I                  +  +L+E ++  +    +
Sbjct: 15  FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR 74

Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNF 120
           +  +V D    ++  K+++   +   G+L+++V NA VA P+   D T E    +   N 
Sbjct: 75  IVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINV 133

Query: 121 ESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
              ++      P +   G  G I+ ISS AG+   P    Y     A+  L +    E  
Sbjct: 134 TGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG 193

Query: 180 KDNIRANSIAPGVIRT-----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA 234
           K +IR NS+ PG + T      +  A+      N  +  +++        EP++++  V 
Sbjct: 194 KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVC 253

Query: 235 FLCFPAASYITGQVICVDGGMT 256
           +L    +  +T   I VD G T
Sbjct: 254 WLASDESRKVTAAQIPVDQGST 275

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  175 bits (447), Expect = 3e-53
 Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 17/249 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIH-TCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
           I GG + +G    +  A      ++H   +++    N+   E + +G KV     DLS+ 
Sbjct: 16  IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNE 75

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E+  KL +     F GK+++ +N     + K  ++T+      + + N +  +   K A 
Sbjct: 76  EEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAA 134

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSI 188
             +  +G+  I+ I++         T  Y  Y      +   T+    E  K  I  N+I
Sbjct: 135 KHMNPNGH--IITIATSLLAAY---TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APG + TS            +      S+    +  + ++++ ++ FL      +I GQ 
Sbjct: 190 APGPMDTSFFYGQETK----ESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWINGQT 244

Query: 249 ICVDGGMTV 257
           I  +GG T 
Sbjct: 245 IFANGGYTT 253

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  175 bits (447), Expect = 4e-53
 Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 17/253 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            TG  RGIG  I  EL   GA ++     +     E + E K  G +      D+S   +
Sbjct: 26  TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSE 85

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L +   S F G L+ +++N+ + V  + L+ T E    + + N    F +++     
Sbjct: 86  VVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
            +  G   I+  SS+A V      P +  Y     A+    +    +     +  N IAP
Sbjct: 145 CRRGGR--IILTSSIAAVMTGI--PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 200

Query: 191 GVIRTSLSDAIRHDPAKN--------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           G ++T + D      A          KI EGL +  P+ R G P ++   V+ LC   + 
Sbjct: 201 GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESE 260

Query: 243 YITGQVICVDGGM 255
           +I GQVI + GG 
Sbjct: 261 WINGQVIKLTGGG 273

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  175 bits (447), Expect = 5e-53
 Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 17/253 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  G  CD+ S  + 
Sbjct: 27  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEI 86

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA---H 131
           E L+  V   + G +++LVNNA         +   E    +  TN   VF ++K      
Sbjct: 87  EALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAG 145

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQAKDNIRANSI 188
            +L+  G G IV I+S  G           PY+ +   +   TK L  E A+  I  N++
Sbjct: 146 GMLER-GTGRIVNIASTGGKQG---VVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 201

Query: 189 APGVIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
            PG + T ++ ++R   +        +  + + +R PI R  +P EV+ +VA+L  P A+
Sbjct: 202 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 261

Query: 243 YITGQVICVDGGM 255
            +T Q + V GG+
Sbjct: 262 AVTAQALNVCGGL 274

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  175 bits (446), Expect = 5e-53
 Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 9/244 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           F+TGG+RGIG AI + LA  GA +  T           + E +  G +      D    E
Sbjct: 35  FVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAE 94

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E+ +        G L++LVN+A +       +TT      + + NF + F   + A  
Sbjct: 95  AIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASR 153

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L   G  II   S++A +   P   LY     A+  LTK L  +     I  N + PG 
Sbjct: 154 HLGDGGR-IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGS 212

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
             T ++ A   D       E    R      GEP +++ LVA+L  P   ++TG  + +D
Sbjct: 213 TDTDMNPA---DGDH---AEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTID 266

Query: 253 GGMT 256
           GG  
Sbjct: 267 GGAN 270

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  175 bits (445), Expect = 6e-53
 Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 27/256 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           IT GT+G+G  + E+L   G  +  T   + T +    + +K    ++     D++ +E 
Sbjct: 12  ITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKED 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
             K++E   S F GK++ L+NNA   V +                 +   N  +VFHL K
Sbjct: 72  LHKIVEEAMSHF-GKIDFLINNAGPYVFE---RKKLVDYEEDEWNEMIQGNLTAVFHLLK 127

Query: 129 LAHPLLKASGNGIIVFIS--SVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKD 181
           L  P+++    G I+                              +  LTK +  E+A+ 
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWI-----YRSAFAAAKVGLVSLTKTVAYEEAEY 182

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
            I AN + PG I   + +A        +  +     TPI R G  ++++  ++FLC   +
Sbjct: 183 GITANMVCPGDIIGEMKEAT-----IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237

Query: 242 SYITGQVICVDGGMTV 257
             ITG +I V G + V
Sbjct: 238 DMITGTIIEVTGAVDV 253

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  173 bits (440), Expect = 4e-52
 Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSR 71
            +TG  +GIG A  E L   GA +     N     +       +    K     CD++ +
Sbjct: 11  LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +Q       V   F G+L++LVNNA V            +  TL   N  SV   + L  
Sbjct: 71  QQLRDTFRKVVDHF-GRLDILVNNAGVN-------NEKNWEKTL-QINLVSVISGTYLGL 121

Query: 132 PLLKASGNG---IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTK--HLECEQAKDNIRAN 186
             +     G   II+ +SS+AG+      P+Y      +   T+   L        +R N
Sbjct: 122 DYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLN 181

Query: 187 SIAPGVIRTSLSDAIRHDPAKNK---IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           +I PG + T++ ++I  +    +     + +          +P  +++ +  L    A  
Sbjct: 182 AICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA-- 239

Query: 244 ITGQVICVDGGMTV 257
           + G ++ +     +
Sbjct: 240 LNGAIMKITTSKGI 253

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  172 bits (439), Expect = 4e-52
 Identities = 48/249 (19%), Positives = 90/249 (36%), Gaps = 25/249 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV---CDLSSR 71
           +TG + GIG       A +GA +    RN+ +L +       +  +            + 
Sbjct: 17  VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTS 76

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKL 129
           E  ++L + ++  +  +L+ +++NA +      +       +   ++  N  + F L++ 
Sbjct: 77  ENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQ-VNVNATFMLTQA 134

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             PLL  S  G +VF SS  G         Y     A   + + L  E  +  +R N I 
Sbjct: 135 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNCIN 193

Query: 190 PGVIRTSLSDAI--RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           PG  RT++  +     DP                +   P ++  L  +L    +   TG 
Sbjct: 194 PGGTRTAMRASAFPTEDPQ---------------KLKTPADIMPLYLWLMGDDSRRKTGM 238

Query: 248 VICVDGGMT 256
                 G  
Sbjct: 239 TFDAQPGRK 247

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  172 bits (438), Expect = 5e-52
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 28/252 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG  +   LA  GA +   + +Q    +     K KG K  G V ++S  E  
Sbjct: 10  VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESI 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           +     + +     +++LVNNA +       D     MS     ++ +TN  S+F +SK 
Sbjct: 70  QNFFAEIKAEN-LAIDILVNNAGI-----TRDNLMMRMSEDEWQSVINTNLSSIFRMSKE 123

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNI 183
               ++K    G I+ I SV G    P     G  N       +   +K L  E A  NI
Sbjct: 124 CVRGMMKKR-WGRIISIGSVVGSAGNP-----GQTNYCAAKAGVIGFSKSLAYEVASRNI 177

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N +APG I T ++D +      ++    + ++ P  + GEP ++++ VAFL    A Y
Sbjct: 178 TVNVVAPGFIATDMTDKL-----TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKY 232

Query: 244 ITGQVICVDGGM 255
           ITGQ + V+GGM
Sbjct: 233 ITGQTLHVNGGM 244

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  172 bits (438), Expect = 7e-52
 Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 26/253 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSREQ 73
           +TGGT+GIG  I    A  GA +    R+  +++  + +  +L   KV G   D+S R Q
Sbjct: 15  VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQ 74

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + L       F G ++++  NA V         T E ++ + + N    F+  +     
Sbjct: 75  CDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN----------GAMNQLTKHLECEQAKDNI 183
           L ASG+G +V  SS+ G       P+ G              A     +    E A   I
Sbjct: 134 LIASGSGRVVLTSSITG-------PITG--YPGWSHYGATKAAQLGFMRTAAIELAPHKI 184

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N+I PG I T             + +  +    P    G P+++  L AFL    A Y
Sbjct: 185 TVNAIMPGNIMTEGLLEN-----GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGY 239

Query: 244 ITGQVICVDGGMT 256
           ITGQ I VDGG  
Sbjct: 240 ITGQAIAVDGGQV 252

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  172 bits (439), Expect = 9e-52
 Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 28/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RGIG  I + LA   + +   SR Q   +  + E K  G + +G   D+S +E+ 
Sbjct: 49  VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEI 108

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
            +++  + +     +++LVNNA +       D     M       +  TN  S+F++++ 
Sbjct: 109 SEVINKILTEH-KNVDILVNNAGITR-----DNLFLRMKNDEWEDVLRTNLNSLFYITQP 162

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDNI 183
               ++     G I+ ISS+ G+T        G  N       +   TK L  E A  NI
Sbjct: 163 ISKRMINN-RYGRIINISSIVGLTGNV-----GQANYSSSKAGVIGFTKSLAKELASRNI 216

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N+IAPG I + ++D I       +I + ++S  P  R G P+EV++L  FL    + Y
Sbjct: 217 TVNAIAPGFISSDMTDKI-----SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 271

Query: 244 ITGQVICVDGGMT 256
           I G+V  +DGG++
Sbjct: 272 INGRVFVIDGGLS 284

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  171 bits (436), Expect = 2e-51
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 28/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG  G+G AI   L   G  +  + S     ++  L   +  G        D++  E 
Sbjct: 30  VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFES 89

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            E+  E V + F GK+++L+NNA +       D T   M+      +  T+ +++F+++K
Sbjct: 90  CERCAEKVLADF-GKVDVLINNAGITR-----DATFMKMTKGDWDAVMRTDLDAMFNVTK 143

Query: 129 -LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDN 182
                +++    G IV I SV G   A      G  N A     ++  TK L  E AK  
Sbjct: 144 QFIAGMVER-RFGRIVNIGSVNGSRGAF-----GQANYASAKAGIHGFTKTLALETAKRG 197

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N+++PG + T++ +A+  D  + KI+     + P+ R G PDEV++L+AFLC   A 
Sbjct: 198 ITVNTVSPGYLATAMVEAVPQDVLEAKIL----PQIPVGRLGRPDEVAALIAFLCSDDAG 253

Query: 243 YITGQVICVDGGM 255
           ++TG  + ++GGM
Sbjct: 254 FVTGADLAINGGM 266

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  171 bits (436), Expect = 2e-51
 Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 10/249 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG  RGIG A+   L   GA ++   + +  +  + + E K  G        D+    +
Sbjct: 23  VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPE 82

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             KL +   + F G L++ V+N+ V       D T E    + S N    F +++ A+  
Sbjct: 83  IVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH 141

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L   G  I++  S+ +   + P   LY    GA++   +    +     I  N++APG  
Sbjct: 142 LTEGG-RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGT 200

Query: 194 RTSLSDAIRHDPAKN-------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
            T +   + H    N       +  +     +P+ R G P +V+++V FL      ++ G
Sbjct: 201 VTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNG 260

Query: 247 QVICVDGGM 255
           +V+ +DGG 
Sbjct: 261 KVLTLDGGA 269

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  170 bits (434), Expect = 2e-51
 Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 29/254 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RG+G AI  +L   GA I+   S   T L+   +E+K  G+ V  +  D+ + E 
Sbjct: 10  VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPED 69

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            E +++T    F G++++LVNNA +       DT    MS      + +TN +S +  +K
Sbjct: 70  VENMVKTAMDAF-GRIDILVNNAGITR-----DTLMLKMSEKDWDDVLNTNLKSAYLCTK 123

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDN 182
                +LK   +G I+ I+S+AG+         G  N       +   TK +  E A   
Sbjct: 124 AVSKIMLKQ-KSGKIINITSIAGIIGNA-----GQANYAASKAGLIGFTKSIAKEFAAKG 177

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG+I+T ++D +      +K+ E  ++  P+ R G P+EV+++V FL    ++
Sbjct: 178 IYCNAVAPGIIKTDMTDVL-----PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSN 232

Query: 243 YITGQVICVDGGMT 256
           YITGQVI +DGG+ 
Sbjct: 233 YITGQVINIDGGLV 246

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  170 bits (434), Expect = 2e-51
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 29/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG  GIG +I + L   G  ++  C  N     + L++ K  G     S  ++   + 
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDS 77

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            ++  + V +   G++++LVNNA +       D     M+      +  TN  S+F+++K
Sbjct: 78  TKQAFDKVKAEV-GEIDVLVNNAGITR-----DVVFRKMTREDWQAVIDTNLTSLFNVTK 131

Query: 129 -LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDN 182
            +   +++  G G I+ ISSV G          G  N +     ++  T  L  E A   
Sbjct: 132 QVIDGMVER-GWGRIINISSVNGQKGQF-----GQTNYSTAKAGIHGFTMSLAQEVATKG 185

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           +  N+++PG I T +  AIR D     ++E +V+  P+ R G PDE+ S+VA+L    + 
Sbjct: 186 VTVNTVSPGYIGTDMVKAIRPD-----VLEKIVATIPVRRLGSPDEIGSIVAWLASEESG 240

Query: 243 YITGQVICVDGGM 255
           + TG    ++GG+
Sbjct: 241 FSTGADFSLNGGL 253

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  171 bits (436), Expect = 2e-51
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 17/254 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG  RGIG  +  EL   G  +I   + +     E +   K  G        ++   E 
Sbjct: 34  VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVED 93

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             ++ E    IF GKL+++ +N+ V       D T E    + + N    F +++ A+  
Sbjct: 94  IVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIAP 190
           L+  G   ++ + S+ G   A   P +  Y+   GA+    + +  + A   I  N +AP
Sbjct: 153 LEIGGR--LILMGSITGQAKA--VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP 208

Query: 191 GVIRTSLSDAIRHDPAKN--------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           G I+T +  A+  +   N              V  +P+ R G P +++ +V FL      
Sbjct: 209 GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 268

Query: 243 YITGQVICVDGGMT 256
           ++TG+VI +DGG  
Sbjct: 269 WVTGKVIGIDGGAC 282

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  170 bits (434), Expect = 4e-51
 Identities = 51/258 (19%), Positives = 92/258 (35%), Gaps = 27/258 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVC 66
           FITG +RGIG AI    A  GA +   +++          ++         G +     C
Sbjct: 10  FITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC 69

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+   +Q    +      F G +++LVNNA+    +  LDT  +    ++  N    F  
Sbjct: 70  DIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVC 128

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNI 183
           ++   P L  + N  I+ ++    +  A     +  Y      M+ +T  L  E     +
Sbjct: 129 AQACLPHLLQAPNPHILTLAPPPSLNPAWWGA-HTGYTLAKMGMSLVTLGLAAEFGPQGV 187

Query: 184 RANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
             N++ P  VI T   + +    A                   P+ ++     +    A+
Sbjct: 188 AINALWPRTVIATDAINMLPGVDAA--------------ACRRPEIMADAAHAVLTREAA 233

Query: 243 YITGQVICVDGGMTVNGF 260
              GQ +  D  +   G 
Sbjct: 234 GFHGQFLIDDEVLAQAGI 251

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  170 bits (434), Expect = 4e-51
 Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 28/255 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG AI  ELA  GA++   +  +         +K  GL+  G+V +++     
Sbjct: 33  VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAV 92

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           + L+E+    F G LN+LVNNA +       D  A  M       +  TN ++VF LS+ 
Sbjct: 93  DALVESTLKEF-GALNVLVNNAGIT-----QDQLAMRMKDDEWDAVIDTNLKAVFRLSRA 146

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDNI 183
              P++KA G G IV I+SV G    P     G  N       +  +T+ L  E     I
Sbjct: 147 VLRPMMKARG-GRIVNITSVVGSAGNP-----GQVNYAAAKAGVAGMTRALAREIGSRGI 200

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N +APG I T ++  +       +    L ++ P+ R G P++++  VAFL  P A Y
Sbjct: 201 TVNCVAPGFIDTDMTKGL-----PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGY 255

Query: 244 ITGQVICVDGGMTVN 258
           ITG  + V+GGM ++
Sbjct: 256 ITGTTLHVNGGMFMS 270

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  169 bits (431), Expect = 6e-51
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 9/243 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  +GIG AI   LA  GA +     N              G K      D+S     
Sbjct: 11  VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSV 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA-HPL 133
           + L   + ++  G +++LVNNA++       D   ++   +   N    F +++     +
Sbjct: 68  KALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQM 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
             A   G ++ I+S       P    Y    G +   T+ L  E  K NI AN++ PG+I
Sbjct: 127 RAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLI 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            +    A          VE       +   G+P+ ++ +V+FL    A +ITGQ + VD 
Sbjct: 187 ESDGVKAS-PHNEAFGFVE---MLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDA 242

Query: 254 GMT 256
           GM 
Sbjct: 243 GMV 245

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  169 bits (430), Expect = 8e-51
 Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 16/248 (6%)

Query: 15  ITGGTRGIGHAIVEELAGF---GAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVCDLS 69
           +TG +RG G A+  +LA     G+++   +R+++ L +  +E   +   LKV  +  DL 
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70

Query: 70  SREQREKLMETVSSIFQ---GKLNLLVNNAAVAVPKEA---LDTTAEYMSTLRSTNFESV 123
           +    ++L+  V  + +    +  LL+NNAA                 ++   + N  S+
Sbjct: 71  TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM 130

Query: 124 FHLSKLAHPLLKASGN--GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
             L+       + S      +V ISS+  +       LY     A + L + L  E+   
Sbjct: 131 LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-- 188

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           ++R  S APG +   +    R      ++   L          +    +  +  L     
Sbjct: 189 SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL-QKD 247

Query: 242 SYITGQVI 249
           ++ +G  +
Sbjct: 248 TFQSGAHV 255

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  170 bits (432), Expect = 1e-50
 Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 37/268 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
           +TG  + IG AI  +L   G  ++     +         E  K +         DL++  
Sbjct: 28  VTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSN 87

Query: 73  QR----EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS----------T 118
                 E+++ +    F G+ ++LVNNA+   P   +    E  S  ++          T
Sbjct: 88  VLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGT 146

Query: 119 NFESVFHLSKLA-------HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT 171
           N  + F L+          +P   +S    IV +             LY     A+  LT
Sbjct: 147 NAIAPFLLTMSFAQRQKGTNPNCTSSN-LSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 205

Query: 172 KHLECEQAKDNIRANSIAPGVIRT--SLSDAIRHDPAKNKIVEGLVSRTPICR-PGEPDE 228
           +    E A   IR N +APGV     ++ +  +         +    + P+ R     ++
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVAMGEEEK---------DKWRRKVPLGRREASAEQ 256

Query: 229 VSSLVAFLCFPAASYITGQVICVDGGMT 256
           ++  V FL   +A YITG +I VDGG++
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVDGGLS 284

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  168 bits (427), Expect = 2e-50
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 37/257 (14%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI  +LA  GA ++   + N+ + NE + E K  G        D+++ E 
Sbjct: 9   VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAED 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
              +++    +F G++++LVNNA V       D     M      T+ +TN + VF  +K
Sbjct: 69  VTNMVKQTVDVF-GQVDILVNNAGVTK-----DNLLMRMKEEEWDTVINTNLKGVFLCTK 122

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDN 182
                +++   +G IV I+SV GVT  P     G  N       +  LTK    E A  N
Sbjct: 123 AVSRFMMRQ-RHGRIVNIASVVGVTGNP-----GQANYVAAKAGVIGLTKTSAKELASRN 176

Query: 183 IRANSIAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           I  N+IAPG I T     L + I+           ++   P  + GE  ++++ V F   
Sbjct: 177 ITVNAIAPGFIATDMTDVLDENIK---------AEMLKLIPAAQFGEAQDIANAVTFFAS 227

Query: 239 PAASYITGQVICVDGGM 255
             + YITGQ + VDGGM
Sbjct: 228 DQSKYITGQTLNVDGGM 244

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  168 bits (429), Expect = 3e-50
 Identities = 69/266 (25%), Positives = 104/266 (39%), Gaps = 29/266 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII-------------HTCSRNQTELNERLQEWKLKGLK 60
           FITG  RG G +    LA  GA I                  +  +L+E  +  + +G K
Sbjct: 19  FITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK 78

Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNF 120
               V D+       +L+      F G+L+++V NA V       + T E   T+   N 
Sbjct: 79  ALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNL 137

Query: 121 ESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLEC 176
              +   +   P +  +GN G IV +SS AG+ A   TP  G Y+     +  LT  L  
Sbjct: 138 TGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---TPGNGHYSASKHGLTALTNTLAI 194

Query: 177 EQAKDNIRANSIAPGVIRT------SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS 230
           E  +  IR NSI P  + T      ++ +     P+                    DEV+
Sbjct: 195 ELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVH--SFPPMPVQPNGFMTADEVA 252

Query: 231 SLVAFLCFPAASYITGQVICVDGGMT 256
            +VA+L    +  +TG  I VD G  
Sbjct: 253 DVVAWLAGDGSGTLTGTQIPVDKGAL 278

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  166 bits (424), Expect = 6e-50
 Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 29/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG +I  +LA  G  +    + ++ +    ++E K KG+       +++  ++
Sbjct: 9   VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            + +++ V S F G L++LVNNA +       D     M       +  TN + VF+  +
Sbjct: 69  VKAMIKEVVSQF-GSLDVLVNNAGITR-----DNLLMRMKEQEWDDVIDTNLKGVFNCIQ 122

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDN 182
            A   +L+    G I+ +SSV G    P     G  N       +  LTK    E A   
Sbjct: 123 KATPQMLRQRS-GAIINLSSVVGAVGNP-----GQANYVATKAGVIGLTKSAARELASRG 176

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           I  N++APG I + ++DA+      +++ E ++++ P+ R G+  ++++ VAFL    A 
Sbjct: 177 ITVNAVAPGFIVSDMTDAL-----SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK 231

Query: 243 YITGQVICVDGGM 255
           YITGQ I V+GGM
Sbjct: 232 YITGQTIHVNGGM 244

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  166 bits (422), Expect = 1e-49
 Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 38/259 (14%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI   L   G  ++   +R+     E  ++ +  G +      D+S    
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEAD 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            E +M+T    + G ++++VNNA +       DT    M       +   N   VF  ++
Sbjct: 66  VEAMMKTAIDAW-GTIDVVVNNAGITR-----DTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDN 182
            A   ++K    G I+ I+SV G+         G  N       +   +K    E A  N
Sbjct: 120 AATKIMMKK-RKGRIINIASVVGLIGNI-----GQANYAAAKAGVIGFSKTAAREGASRN 173

Query: 183 IRANSIAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           I  N + PG I +     L + +          + ++   P+ R G+P+ V+ LV FL  
Sbjct: 174 INVNVVCPGFIASDMTAKLGEDME---------KKILGTIPLGRTGQPENVAGLVEFLAL 224

Query: 239 -PAASYITGQVICVDGGMT 256
            PAASYITGQ   +DGG+ 
Sbjct: 225 SPAASYITGQAFTIDGGIA 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  165 bits (421), Expect = 2e-49
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 29/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG TRGIG AI E+LA  G+ +I T +  +       +     G+K  G   +L S E 
Sbjct: 12  VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEES 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
             K  E + ++    +++LVNNA +       D     MS      +   N    F +++
Sbjct: 72  INKAFEEIYNLV-DGIDILVNNAGITR-----DKLFLRMSLLDWEEVLKVNLTGTFLVTQ 125

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDN 182
            +   ++K    G IV ISSV G T        G  N +     +   TK L  E A  N
Sbjct: 126 NSLRKMIKQRW-GRIVNISSVVGFTGNV-----GQVNYSTTKAGLIGFTKSLAKELAPRN 179

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           +  N++APG I T ++  +       +I +    + P+ R G P+EV+++V FLC   AS
Sbjct: 180 VLVNAVAPGFIETDMTAVL-----SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS 234

Query: 243 YITGQVICVDGGM 255
           YITG+VI V+GGM
Sbjct: 235 YITGEVIHVNGGM 247

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  165 bits (420), Expect = 2e-49
 Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 31/252 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG AI E LA  GA +   + +++            G    G   ++++ E  
Sbjct: 14  VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALNVTNPESI 70

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           E +++ ++  F G +++LVNNA +       D     M       +  TN  S+F LSK 
Sbjct: 71  EAVLKAITDEF-GGVDILVNNAGIT-----RDNLLMRMKEEEWSDIMETNLTSIFRLSKA 124

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDNI 183
               ++K    G I+ + SV G          G  N       +   TK +  E A   +
Sbjct: 125 VLRGMMKKRQ-GRIINVGSVVGTMGNA-----GQANYAAAKAGVIGFTKSMAREVASRGV 178

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N++APG I T ++ A+      ++     +++ P  R G+P E++S VAFL  P A+Y
Sbjct: 179 TVNTVAPGFIETDMTKAL-----NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAY 233

Query: 244 ITGQVICVDGGM 255
           ITG+ + V+GGM
Sbjct: 234 ITGETLHVNGGM 245

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  166 bits (423), Expect = 3e-49
 Identities = 67/258 (25%), Positives = 100/258 (38%), Gaps = 36/258 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSREQ 73
           +TGGT+GIG  I    A  GA +   +R+  EL+    E  +L    V G   D+S    
Sbjct: 46  VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGS 105

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
                 TV   F G L+++  NA +       +   + M+      +   N +   +  +
Sbjct: 106 CADAARTVVDAF-GALDVVCANAGIFP-----EARLDTMTPEQLSEVLDVNVKGTVYTVQ 159

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN----------GAMNQLTKHLECEQ 178
                L ASG G ++  SS+ G       P+ G              A     +    E 
Sbjct: 160 ACLAPLTASGRGRVILTSSITG-------PVTG--YPGWSHYGASKAAQLGFMRTAAIEL 210

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
           A   +  N+I PG I T     +       + + G+    P+   G P ++  L AFL  
Sbjct: 211 APRGVTVNAILPGNILTEGLVDM-----GEEYISGMARSIPMGMLGSPVDIGHLAAFLAT 265

Query: 239 PAASYITGQVICVDGGMT 256
             A YITGQ I VDGG  
Sbjct: 266 DEAGYITGQAIVVDGGQV 283

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  166 bits (422), Expect = 3e-49
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITGG  GIG A+    A  GA I       + + NE  Q  + +G+K      DLS  + 
Sbjct: 52  ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQH 111

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
            + +++       G LN+LVNN A   P++ L+  T  +   T R  N  S FH++K A 
Sbjct: 112 CKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFR-INIFSYFHVTKAAL 169

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             LK      I+  +S+           Y    GA+   T+ L     +  IR N +APG
Sbjct: 170 SHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPG 227

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T L  +      K   V    S  P+ RPG+P E++    +L    +SY+TGQ+I V
Sbjct: 228 PIWTPLIPSSF--DEKK--VSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHV 283

Query: 252 DGGMTVNG 259
           +GG+ VNG
Sbjct: 284 NGGVIVNG 291

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  165 bits (420), Expect = 3e-49
 Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 31/252 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG T GIG AI       GAI+      + +L E   +    G  V     +LS R+  
Sbjct: 32  VTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSANLSDRKSI 88

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           ++L E         +++LVNNA +       D     M       + + N  +   L++ 
Sbjct: 89  KQLAEVAEREM-EGIDILVNNAGI-----TRDGLFVRMQDQDWDDVLAVNLTAASTLTRE 142

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNI 183
             H +++    G I+ I+S+ GV   P     G  N       +   +K L  E A  NI
Sbjct: 143 LIHSMMRRR-YGRIINITSIVGVVGNP-----GQTNYCAAKAGLIGFSKALAQEIASRNI 196

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N IAPG I+++++D +       K  E +++  P+ R G  +E++    +L    A+Y
Sbjct: 197 TVNCIAPGFIKSAMTDKL-----NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAY 251

Query: 244 ITGQVICVDGGM 255
           +TGQ + ++GGM
Sbjct: 252 LTGQTLHINGGM 263

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  165 bits (420), Expect = 5e-49
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 15/248 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG+RGIG A+    A  G  +    + N+   +  +      G +      D+ +   
Sbjct: 31  VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAAD 90

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLA-H 131
              +   V   F G+L+ LVNNA +    + + + + E +  +   N       +  A  
Sbjct: 91  IAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149

Query: 132 PLLKASGN--GIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRAN 186
            + +      G IV +SS+A +  +     Y  Y     A++  T  L  E A + IR N
Sbjct: 150 RMSRLYSGQGGAIVNVSSMAAILGSA--TQYVDYAASKAAIDTFTIGLAREVAAEGIRVN 207

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++ PG+I T L  +    P +      +    P+ R G P+EV+  + +L  P+ASY+TG
Sbjct: 208 AVRPGIIETDLHASGG-LPDR---AREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTG 263

Query: 247 QVICVDGG 254
            ++ V GG
Sbjct: 264 SILNVSGG 271

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  164 bits (418), Expect = 5e-49
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 22/243 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +   +RGIG A+ + L+  GA +  C+RN+  L      +          VCDL      
Sbjct: 24  VLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VCDLR----- 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-AEYMSTLRSTNFESVFHLSKLAHPL 133
            K ++ +      ++++LV NA         + T  ++   +  + F ++  + +   P 
Sbjct: 70  -KDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAID-SLFLNMIKIVRNYLPA 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K  G G IV I+S + ++             A+    K L  E A   I  N +APG  
Sbjct: 127 MKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWT 186

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T     +  +  K    + + S+ P+ R  +P+E++S+VAFLC   ASY+TGQ I VDG
Sbjct: 187 ETERVKELLSEEKK----KQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG 242

Query: 254 GMT 256
           G++
Sbjct: 243 GLS 245

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  164 bits (417), Expect = 7e-49
 Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 21/241 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSV---CDLSSR 71
           +TG  RGIG A     A  GA +    R +  L E   + K  G      +    + ++ 
Sbjct: 19  VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATA 78

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKL 129
           +Q  +L   V   F G+L+ L++NA++  P+  L+     ++M  +   N  + F L++ 
Sbjct: 79  QQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMH-VNVNATFMLTRA 136

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE-QAKDNIRANSI 188
             PLLK S +  I F SS  G         YG    A   L + L  E +    +RANSI
Sbjct: 137 LLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSI 196

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG  RT +              +      P+  P  P+++  +  +L  P ++ I GQ 
Sbjct: 197 NPGATRTGMR------------AQAYPDENPLNNPA-PEDIMPVYLYLMGPDSTGINGQA 243

Query: 249 I 249
           +
Sbjct: 244 L 244

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  163 bits (415), Expect = 1e-48
 Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 32/255 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG A +E  A  GA +  C   +  L E  +      +     V D++     
Sbjct: 10  ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMDVADPASV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           E+      +   G+L+ +V+ A +       D     M       +   N    F ++K 
Sbjct: 65  ERGFAEALAHL-GRLDGVVHYAGITR-----DNFHWKMPLEDWELVLRVNLTGSFLVAKA 118

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNIR 184
           A   ++    G IV  +S   +         G  N A     +  LT+ L  E  +  IR
Sbjct: 119 ASEAMREKNPGSIVLTASRVYLGNL------GQANYAASMAGVVGLTRTLALELGRWGIR 172

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N++APG I T ++  +       K+ E  ++ TP+ R G+P EV+    FL    +S+I
Sbjct: 173 VNTLAPGFIETRMTAKV-----PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFI 227

Query: 245 TGQVICVDGGMTVNG 259
           TGQV+ VDGG T+  
Sbjct: 228 TGQVLFVDGGRTIGA 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  163 bits (414), Expect = 2e-48
 Identities = 80/261 (30%), Positives = 117/261 (44%), Gaps = 38/261 (14%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLK-VTGSVCDLSSRE 72
           ITG +RGIG AI   LA  G  +     +N+ +  E  +E + +G   V     +L   E
Sbjct: 6   ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAE 65

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLS 127
               L+   + +  G L+ LVNNA +       DT    M       +   N  +VF  +
Sbjct: 66  AATALVHQAAEVL-GGLDTLVNNAGITR-----DTLLVRMKDEDWEAVLEANLSAVFRTT 119

Query: 128 KLA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKD 181
           + A   ++KA   G IV I+SV G+   P     G  N       +   T+ +  E A+ 
Sbjct: 120 REAVKLMMKARF-GRIVNITSVVGILGNP-----GQANYVASKAGLIGFTRAVAKEYAQR 173

Query: 182 NIRANSIAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
            I  N++APG I T     L   ++         E  + + P  R G P+EV+  VAFL 
Sbjct: 174 GITVNAVAPGFIETEMTERLPQEVK---------EAYLKQIPAGRFGRPEEVAEAVAFLV 224

Query: 238 FPAASYITGQVICVDGGMTVN 258
              A YITGQ +CVDGG+T +
Sbjct: 225 SEKAGYITGQTLCVDGGLTPH 245

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  162 bits (413), Expect = 4e-48
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 33/260 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVT-------GSVCD 67
           +TG   GIG A+   LAG GA +  C  ++    E ++     G K             D
Sbjct: 12  VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQAD 71

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFES 122
           +S       L+E V + F    +++V+ A +       D    +MS      + + N + 
Sbjct: 72  VSEARAARCLLEQVQACFSRPPSVVVSCAGITQ-----DEFLLHMSEDDWDKVIAVNLKG 126

Query: 123 VFHLSKLA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLEC 176
            F +++ A   L+     G I+ ISS+ G          G  N       +  LT+    
Sbjct: 127 TFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV-----GQTNYAASKAGVIGLTQTAAR 181

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL 236
           E  +  IR NS+ PG I T ++  +       K+V+ +    P+   G+P++V+ +VAFL
Sbjct: 182 ELGRHGIRCNSVLPGFIATPMTQKV-----PQKVVDKITEMIPMGHLGDPEDVADVVAFL 236

Query: 237 CFPAASYITGQVICVDGGMT 256
               + YITG  + V GG+ 
Sbjct: 237 ASEDSGYITGTSVEVTGGLF 256

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  162 bits (413), Expect = 5e-48
 Identities = 57/268 (21%), Positives = 97/268 (36%), Gaps = 35/268 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQE-WKLKGLKVTGSVCDLSSRE 72
           ITGG R IGH+I   L   G  ++     ++      + E    +         DLS   
Sbjct: 16  ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS 75

Query: 73  Q----REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----------S 117
                 E +++     F G+ ++LVNNA+   P   L       +               
Sbjct: 76  SLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 134

Query: 118 TNFESVFHLSKLAHPLLKASG-----NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTK 172
           +N  +   L +         G     N  +V +         P   +Y     A+  LT+
Sbjct: 135 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTR 194

Query: 173 HLECEQAKDNIRANSIAPGVIRT--SLSDAIRHDPAKNKIVEGLVSRTPICRP-GEPDEV 229
               E A  +IR N++APG+     ++    +         E    + P+ +      ++
Sbjct: 195 AAALELAPRHIRVNAVAPGLSLLPPAMPQETQ---------EEYRRKVPLGQSEASAAQI 245

Query: 230 SSLVAFLCFPAASYITGQVICVDGGMTV 257
           +  +AFL    A YITG  + VDGG+ +
Sbjct: 246 ADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  162 bits (412), Expect = 5e-48
 Identities = 81/255 (31%), Positives = 117/255 (45%), Gaps = 33/255 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TG +RGIG AI  ELA  GA +    + +    +E +      G +      D+S   +
Sbjct: 33  VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESE 92

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSK 128
            E L   V   + G+L++LVNNA +       DT    M      ++   N   VF  S+
Sbjct: 93  VEALFAAVIERW-GRLDVLVNNAGITR-----DTLLLRMKRDDWQSVLDLNLGGVFLCSR 146

Query: 129 LA-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDN 182
            A   +LK   +G I+ I+SV G    P     G  N       +  LTK +  E A   
Sbjct: 147 AAAKIMLKQ-RSGRIINIASVVGEMGNP-----GQANYSAAKAGVIGLTKTVAKELASRG 200

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAA 241
           I  N++APG I T ++  +  +     I        P+ R GE  EV+ +V FL   PAA
Sbjct: 201 ITVNAVAPGFIATDMTSELAAEKLLEVI--------PLGRYGEAAEVAGVVRFLAADPAA 252

Query: 242 SYITGQVICVDGGMT 256
           +YITGQVI +DGG+ 
Sbjct: 253 AYITGQVINIDGGLV 267

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  162 bits (412), Expect = 8e-48
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 14/249 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQ 73
           +TGG  G+G  I + L+  G  +    R    L+    E   + G  V   VCD+   +Q
Sbjct: 38  VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQ 97

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAH 131
              L   V + F  +L+LLVNNA   VP   L+  T  ++   + + N    F  ++ A 
Sbjct: 98  VAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIV-AANLTGAFLCTQHAF 155

Query: 132 PLLKASGN--GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
            ++KA     G I+   S++  T  P +  Y     A+  LTK    +    +I    I 
Sbjct: 156 RMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQID 215

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQV 248
            G   T ++  +         V               + ++  V ++   P ++ +    
Sbjct: 216 IGNAATDMTARMSTG------VLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMT 269

Query: 249 ICVDGGMTV 257
           +       V
Sbjct: 270 VMATRMPLV 278

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  162 bits (413), Expect = 9e-48
 Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 11/247 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
           +TGG  GIG A     A  GA   I+     + +  +     +  G K      DLS   
Sbjct: 54  VTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDES 113

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLA 130
               L+        G L++L   A        +   T+ ++  T    N  ++F +++ A
Sbjct: 114 FARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFA-VNVFALFWITQEA 171

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            PLL    +  I+  SS+     +P    Y     A+   ++ L  + A+  IR N +AP
Sbjct: 172 IPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP 229

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I T+L  +      K   +     +TP+ R G+P E++ +  +L    +SY+T +V  
Sbjct: 230 GPIWTALQISGGQTQDK---IPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHG 286

Query: 251 VDGGMTV 257
           V GG  +
Sbjct: 287 VCGGEHL 293

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  162 bits (412), Expect = 1e-47
 Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 29/269 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGA---IIHTCSRNQT---------ELNERLQEWKLKGLKV 61
            ITGG RG+G +    LA  GA   I   C  +           +L E +   +  G + 
Sbjct: 14  LITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRC 73

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
             +  D+  R   E  +        G +++ + NA ++      +  +     +  TN  
Sbjct: 74  ISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLT 132

Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA---MNQLTKHLECEQ 178
             F+      P +     G IV +SS+ G +A         Y  +   +  LTK    + 
Sbjct: 133 GTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA---NFAQASYVSSKWGVIGLTKCAAHDL 189

Query: 179 AKDNIRANSIAPGVIRT----------SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDE 228
               I  N++APG I T          ++   +     K+                +P+E
Sbjct: 190 VGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEE 249

Query: 229 VSSLVAFLCFPAASYITGQVICVDGGMTV 257
           V+  V FL   A+S+ITG V+ +D G T 
Sbjct: 250 VTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  161 bits (411), Expect = 1e-47
 Identities = 67/267 (25%), Positives = 100/267 (37%), Gaps = 29/267 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII------------HTCSRNQTELNERLQEWKLKGLKV 61
           FITG  RG G A    LA  GA I                    EL   ++  +  G ++
Sbjct: 17  FITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRI 76

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
                D+  RE     ++       G+L+++V NA +A     +    +    +   N  
Sbjct: 77  VARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIA----PMSAGDDGWHDVIDVNLT 131

Query: 122 SVFHLSKLAHPLLKASGN-GIIVFISSVAGVT-AAPLTPLYGPYN---GAMNQLTKHLEC 176
            V+H  K+A P L   G  G IV ISS AG+       P    Y      +  L +    
Sbjct: 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYAN 191

Query: 177 EQAKDNIRANSIAPGVIRT------SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS 230
             A   IR NSI P  + T         + +    A       + +  P+     P++V+
Sbjct: 192 LLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV-EVLAPEDVA 250

Query: 231 SLVAFLCFPAASYITGQVICVDGGMTV 257
           + VA+L    A YITG  + VD G   
Sbjct: 251 NAVAWLVSDQARYITGVTLPVDAGFLN 277

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  161 bits (411), Expect = 1e-47
 Identities = 63/276 (22%), Positives = 104/276 (37%), Gaps = 37/276 (13%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII----------------HTCSRNQTELNERLQEWKLK 57
           F+TG  RG G +    LA  GA I                   +    +L E     K  
Sbjct: 15  FVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH 74

Query: 58  GLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLR 116
             ++  +  D+   +  +  +++      G+L+++V NA +    + L  T+ E  + + 
Sbjct: 75  NRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMI 133

Query: 117 STNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTK 172
             N   V+   K   P + A G  G I+  SSV G+ A    P  G Y      +  L +
Sbjct: 134 DINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA---YPHTGHYVAAKHGVVGLMR 190

Query: 173 HLECEQAKDNIRANSIAPGVIRTSL-----------SDAIRHDPAKNKIVEGLVSRTPIC 221
               E  +  IR NS+ P  ++T +            D     P     +  +    PI 
Sbjct: 191 AFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPI- 249

Query: 222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
              EP ++S+ V F     A YITG  + +D G  +
Sbjct: 250 PWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  160 bits (408), Expect = 2e-47
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 35/252 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG + GIG AI   L   G+ +     N+ +L              T  VC+L+++E+ 
Sbjct: 19  ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVCNLANKEEC 75

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
             L+          L++LV NA +       DT A  M       +   N ++ F L++ 
Sbjct: 76  SNLISKT-----SNLDILVCNAGI-----TSDTLAIRMKDQDFDKVIDINLKANFILNRE 125

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNI 183
           A   +++    G I+ ISS+ G+   P     G  N       +  +TK L  E A   I
Sbjct: 126 AIKKMIQKR-YGRIINISSIVGIAGNP-----GQANYCASKAGLIGMTKSLSYEVATRGI 179

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N++APG I++ ++D +       K  E +V + P+   G P++V+  VAFL    ASY
Sbjct: 180 TVNAVAPGFIKSDMTDKL-----NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASY 234

Query: 244 ITGQVICVDGGM 255
           ITGQ + V+GGM
Sbjct: 235 ITGQTLHVNGGM 246

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  160 bits (408), Expect = 2e-47
 Identities = 49/240 (20%), Positives = 89/240 (37%), Gaps = 16/240 (6%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG   G+G A+   LAG G  +    R    L E   E    G        D++  +  
Sbjct: 33  VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSV 89

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAHP 132
             L       F G++++L NNA    P   ++  T A++   +  TN    F  ++ A  
Sbjct: 90  RALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVV-DTNLTGPFLCTQEAFR 147

Query: 133 LLKASGN--GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
           ++KA     G I+   S++  +  P +  Y     A+  LTK    +    +I    I  
Sbjct: 148 VMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDI 207

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQVI 249
           G   T ++  ++    +            +    +   V+S V ++   P  + +    I
Sbjct: 208 GNADTPMAQKMKAGVPQ------ADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTI 261

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  160 bits (407), Expect = 5e-47
 Identities = 64/277 (23%), Positives = 103/277 (37%), Gaps = 38/277 (13%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII------------HTCSRNQTELNERLQEWKLKGLKV 61
            +TGG RG G +   +LA  GA I                    +L E   E +  G K 
Sbjct: 14  LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKA 73

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
             +  D+  R    + +    + F GKL+++V NA +           +  +     +F 
Sbjct: 74  YTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAGICPL--GAHLPVQAFADAFDVDFV 130

Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------PLTPLYGPYN---GAMNQL 170
            V +    A P L +  +  I+   SVAG+ AA        P  P    Y+     ++  
Sbjct: 131 GVINTVHAALPYLTSGAS--IITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSY 188

Query: 171 TKHLECEQAKDNIRANSIAPGVIRT------SLSDAIRHDPAKNKIVEGLVSRTPICRPG 224
           T  L  + A  +IRAN I P  + T       +    R D       + L++   +    
Sbjct: 189 TLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP 248

Query: 225 ----EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
               E  ++S+ V FL    + Y+TG    VD G  +
Sbjct: 249 TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  158 bits (401), Expect = 1e-46
 Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 26/253 (10%)

Query: 9   NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           +  +  +TG   G+G A+   L   G  +    R    L ++       G  V G V DL
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADL 58

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           +  E  +           G   L+++ A           TAE +  +  +N  S   +++
Sbjct: 59  AHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRA 185
               L+   G G++  + S A             Y      M    + L  E     +R 
Sbjct: 118 QTVRLIGERG-GVLANVLSSAAQVG---KANESLYCASKWGMRGFLESLRAELKDSPLRL 173

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF-LCFPAASYI 244
            ++ P  IR+   D   H                      P++ ++ +   L   ++ ++
Sbjct: 174 VNLYPSGIRSEFWDNTDHVDPS--------------GFMTPEDAAAYMLDALEARSSCHV 219

Query: 245 TGQVICVDGGMTV 257
           T   I  + G   
Sbjct: 220 TDLFIGRNEGHHH 232

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  159 bits (405), Expect = 1e-46
 Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 33/272 (12%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII------------HTCSRNQTELNERLQEWKLKGLKV 61
           FITG  RG G +    LA  GA I                    +L E +++ +  G ++
Sbjct: 32  FITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRI 91

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNF 120
             S  D+   +  +  ++   +   G+L++++ NAA+A     L     +    +   N 
Sbjct: 92  IASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL 150

Query: 121 ESVFHLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLEC 176
              +  +++A P ++     G IVF SS+ G+         G Y      ++ L + +  
Sbjct: 151 NGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---AENIGNYIASKHGLHGLMRTMAL 207

Query: 177 EQAKDNIRANSIAPGVIRT-----------SLSDAIRHDPAKNKIVEGLVSRTPICRPGE 225
           E    NIR N + P  + T              D         ++    +   PI    E
Sbjct: 208 ELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI-PYVE 266

Query: 226 PDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           P ++S+ + FL    A YITG  + VDGG  +
Sbjct: 267 PADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  158 bits (401), Expect = 2e-46
 Identities = 57/245 (23%), Positives = 93/245 (37%), Gaps = 9/245 (3%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG  I  +L   GA ++   R+   L    QE +  G +    VCD S   + 
Sbjct: 10  VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEV 69

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEA-------LDTTAEYMSTLRSTNFESVFHLS 127
             L E V    QG+L++LVNNA   V            +T A     + +      +  S
Sbjct: 70  RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCS 129

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
                L+  +G G+IV ISS   +        YG    A ++L      E  +  +   S
Sbjct: 130 VYGARLMVPAGQGLIVVISSPGSLQYMF-NVPYGVGKAACDKLAADCAHELRRHGVSCVS 188

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITG 246
           + PG+++T L           +       ++        +     V  L   P    ++G
Sbjct: 189 LWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSG 248

Query: 247 QVICV 251
           +V+  
Sbjct: 249 KVLPS 253

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  157 bits (400), Expect = 3e-46
 Identities = 40/247 (16%), Positives = 73/247 (29%), Gaps = 20/247 (8%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS-SRE 72
                 GIG     EL            R +        +     + +T    D++    
Sbjct: 10  FVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVA 69

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           + +KL++ +       +++L+N A +             +    + NF  + + +     
Sbjct: 70  ESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTAILD 120

Query: 133 LL---KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
                K    GII  I SV G  A    P+Y     A+   T  L        + A SI 
Sbjct: 121 FWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSIN 180

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG+ RT L        +   +   +            ++             +   G + 
Sbjct: 181 PGITRTPLVHTF---NSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEANKNGAIW 234

Query: 250 CVDGGMT 256
            +D G  
Sbjct: 235 KLDLGTL 241

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  157 bits (398), Expect = 4e-46
 Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 32/248 (12%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GG+  +G  +V+          +    +    +                   S  E+ 
Sbjct: 27  VLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------HSFTIKDSGEEEI 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           + ++E ++S    K++  V  A       A  D   + +  +   N  S F  + +   L
Sbjct: 75  KSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKL 133

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAPG 191
           L     G+ V   + A +        YG    A + + K L  E         +  I P 
Sbjct: 134 LN--QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPV 191

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            + T  +     D   +         TP+    E      L  +     +    G ++  
Sbjct: 192 TLDTPTNRKYMSDANFDD-------WTPLSEVAEK-----LFEWSTNSDSRPTNGSLVKF 239

Query: 252 D--GGMTV 257
           +    +T 
Sbjct: 240 ETKSKVTT 247

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  158 bits (401), Expect = 4e-46
 Identities = 63/285 (22%), Positives = 101/285 (35%), Gaps = 54/285 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSS- 70
           +TG  + +G +I E L   G    +H   R+  E N         +         DLS+ 
Sbjct: 14  VTGAAKRLGRSIAEGLHAEGYAVCLH-YHRSAAEANALSATLNARRPNSAITVQADLSNV 72

Query: 71  ----------------REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE---- 110
                             +  +L+    + + G+ ++LVNNA+   P   L    +    
Sbjct: 73  ATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEP 131

Query: 111 ----------YMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIVFISSVAGVTAA 154
                       + L  +N  + + L K     +  +       N  I+ +         
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 191

Query: 155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT--SLSDAIRHDPAKNKIVE 212
               +Y    GA+  LT+    E A   IR N + PG+      +  A+          E
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVW---------E 242

Query: 213 GLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT 256
           G  S+ P+  R     EVS +V FLC   A YITG  + VDGG +
Sbjct: 243 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  156 bits (397), Expect = 1e-45
 Identities = 46/257 (17%), Positives = 92/257 (35%), Gaps = 25/257 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVC 66
           FI+GG+RGIG AI + +A  GA +   +++          +    +E +  G +    V 
Sbjct: 13  FISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG 72

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+   +     +      F G +++ VNNA+        +   +    +        + +
Sbjct: 73  DIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAV 131

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNI 183
           S+   P +K   N  I+ +S    +   P      PY      M      +  E     I
Sbjct: 132 SQSCIPHMKGRDNPHILTLSPPIRLE--PKWLRPTPYMMAKYGMTLCALGIAEELRDAGI 189

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
            +N++ P       + A++           L     + R  +P+  +     +    +SY
Sbjct: 190 ASNTLWPRTTVA--TAAVQ---------NLLGGDEAMARSRKPEVYADAAYVVLNKPSSY 238

Query: 244 ITGQVICVDGGMTVNGF 260
            TG  +  +  +  +G 
Sbjct: 239 -TGNTLLCEDVLLESGV 254

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  155 bits (395), Expect = 2e-45
 Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 23/240 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG +RGIG AI  +L   GA +   +R+  +L    +E    G +     CDLS  +  
Sbjct: 34  VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAI 93

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
                 V +   G+ ++LVNNA V             M       L + N ++ + L + 
Sbjct: 94  AAFATGVLAAH-GRCDVLVNNAGVG----WFGGPLHTMKPAEWDALIAVNLKAPYLLLRA 148

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P + A+  G I+ ISS+AG         Y      +N L      E  +  +R + +A
Sbjct: 149 FAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVA 208

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           PG +RT     +    AK   +             EPD+++ +VA L   A      +V+
Sbjct: 209 PGSVRTEFGVGL---SAKKSAL----------GAIEPDDIADVVALLATQADQSFISEVL 255

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  157 bits (398), Expect = 3e-45
 Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 24/267 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII------------HTCSRNQTELNERLQEWKLKGLKV 61
           FITG  RG G      LA  GA I                 +  EL E ++  + +G ++
Sbjct: 50  FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRI 109

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
                D+      + +++   + F G +++LV+N  ++   E +  T +  S +  TN  
Sbjct: 110 IARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168

Query: 122 SVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK 180
             +H  +   P +   G  G ++F+SS  G+  AP    Y      +  L   L  E  +
Sbjct: 169 GAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGR 228

Query: 181 DNIRANSIAPGVIRT---------SLSDAIRHDPAKNKIVEGLVSRTPICRP-GEPDEVS 230
            NIR NS+ PG + T          +      +P +    E     T +  P  EP++VS
Sbjct: 229 HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVS 288

Query: 231 SLVAFLCFPAASYITGQVICVDGGMTV 257
           + VA+L    A YI G  I VDGG   
Sbjct: 289 NAVAWLASDEARYIHGAAIPVDGGQLA 315

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  154 bits (392), Expect = 3e-45
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 47/256 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG RGIG AI + LA  G  +    R                  + G   D++  +  
Sbjct: 20  VTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAV 68

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           ++    V     G + +LV+NA ++      D     M+      + + N    F +++ 
Sbjct: 69  DRAFTAVEEHQ-GPVEVLVSNAGLSA-----DAFLMRMTEEKFEKVINANLTGAFRVAQR 122

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNI 183
           A   + +    G ++FI SV+G+            N A     +  + + +  E +K N+
Sbjct: 123 ASRSMQRNKF-GRMIFIGSVSGLWGIG-----NQANYAASKAGVIGMARSIARELSKANV 176

Query: 184 RANSIAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
            AN +APG I T    +L + I+         +G +   P  R G P EV+ +V+FL   
Sbjct: 177 TANVVAPGYIDTDMTRALDERIQ---------QGALQFIPAKRVGTPAEVAGVVSFLASE 227

Query: 240 AASYITGQVICVDGGM 255
            ASYI+G VI VDGGM
Sbjct: 228 DASYISGAVIPVDGGM 243

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  154 bits (392), Expect = 4e-45
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 47/256 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG RGIG AI    A  G  +    R+                      CD++  EQ 
Sbjct: 26  VTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQV 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS-----TLRSTNFESVFHLSKL 129
           E+  + +     G + +L+ NA V       D     MS     ++  TN    F + K 
Sbjct: 75  EQAYKEIEETH-GPVEVLIANAGVTK-----DQLLMRMSEEDFTSVVETNLTGTFRVVKR 128

Query: 130 A-HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA-----MNQLTKHLECEQAKDNI 183
           A   +L+A   G +V ISSV G+  +      G  N A     +    + L  E    NI
Sbjct: 129 ANRAMLRAKK-GRVVLISSVVGLLGSA-----GQANYAASKAGLVGFARSLARELGSRNI 182

Query: 184 RANSIAPGVIRT----SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP 239
             N +APG + T     L+D  R           +VS+ P+ R   P+E+++ V FL   
Sbjct: 183 TFNVVAPGFVDTDMTKVLTDEQR---------ANIVSQVPLGRYARPEEIAATVRFLASD 233

Query: 240 AASYITGQVICVDGGM 255
            ASYITG VI VDGG+
Sbjct: 234 DASYITGAVIPVDGGL 249

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  156 bits (395), Expect = 7e-45
 Identities = 63/285 (22%), Positives = 100/285 (35%), Gaps = 54/285 (18%)

Query: 15  ITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLS-- 69
           +TG  + +G +I E L   G    +H   R+  E N         +         DLS  
Sbjct: 51  VTGAAKRLGRSIAEGLHAEGYAVCLH-YHRSAAEANALSATLNARRPNSAITVQADLSNV 109

Query: 70  ---------------SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE---- 110
                             +  +L+    + + G+ ++LVNNA+   P   L    +    
Sbjct: 110 ATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEP 168

Query: 111 ----------YMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIVFISSVAGVTAA 154
                       + L  +N  + + L K     +  +       N  I+ +         
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 228

Query: 155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT--SLSDAIRHDPAKNKIVE 212
               +Y    GA+  LT+    E A   IR N + PG+      +  A+          E
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVW---------E 279

Query: 213 GLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT 256
           G  S+ P+  R     EVS +V FLC   A YITG  + VDGG +
Sbjct: 280 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  154 bits (392), Expect = 3e-43
 Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 30/252 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG  RGIG  I E  A  GA +     +     E L+      +  T    D+++ +  
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKR-VADKVGGTALTLDVTADDAV 274

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----STNFESVFHLSK- 128
           +K+   V+    GK+++LVNNA +       D     M   R     + N  +   L++ 
Sbjct: 275 DKITAHVTEHHGGKVDILVNNAGIT-----RDKLLANMDEKRWDAVIAVNLLAPQRLTEG 329

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN-----GAMNQLTKHLECEQAKDNI 183
           L        G G ++ +SS+AG+         G  N       M  L + L    A   I
Sbjct: 330 LVGNGTIGEG-GRVIGLSSMAGIAGNR-----GQTNYATTKAGMIGLAEALAPVLADKGI 383

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
             N++APG I T +++AI          E       + + G+P +V+ L+A+   PA++ 
Sbjct: 384 TINAVAPGFIETKMTEAI-----PLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNA 438

Query: 244 ITGQVICVDGGM 255
           +TG  I V G  
Sbjct: 439 VTGNTIRVCGQA 450

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  148 bits (376), Expect = 6e-43
 Identities = 33/247 (13%), Positives = 71/247 (28%), Gaps = 29/247 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GG   +G   V+        + +    + E            + V  +       +Q 
Sbjct: 12  VYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA-------SVIVKMTDSFTEQADQV 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +  +      K++ ++  A   A       +  +    +   +  +    S LA   
Sbjct: 65  TAEVGKLLG--DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH 122

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAPG 191
           LK    G++    + A +   P    YG   GA++QL + L  +         A ++ P 
Sbjct: 123 LK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV 180

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            + T ++     +                      + +               +G +I V
Sbjct: 181 TLDTPMNRKSMPE-------------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV 227

Query: 252 --DGGMT 256
               G T
Sbjct: 228 VTTDGKT 234

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  145 bits (367), Expect = 2e-41
 Identities = 46/252 (18%), Positives = 96/252 (38%), Gaps = 19/252 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE---RLQEWKLKGLKVTGSVCDLSS 70
            ITG ++GIG  I   LA  G  +   +R++  L +    +        +      D++ 
Sbjct: 11  IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
             + +  ++ +   + G +++LVN AA+ +     +    +   +   N  + + + K  
Sbjct: 71  CTKADTEIKDIHQKY-GAVDILVNAAAMFMDGSLSEPVDNFRKIME-INVIAQYGILKTV 128

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             ++K   NG I  ++S A         +YG    A+  L + L  E A   IR  ++ P
Sbjct: 129 TEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCP 188

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQVI 249
           G + T ++      P K++               +PD++ + +  L        I   V 
Sbjct: 189 GWVNTDMAKKA-GTPFKDE------------EMIQPDDLLNTIRCLLNLSENVCIKDIVF 235

Query: 250 CVDGGMTVNGFN 261
            +   +     +
Sbjct: 236 EMKKSIIEGHHH 247

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  143 bits (362), Expect = 5e-41
 Identities = 37/253 (14%), Positives = 80/253 (31%), Gaps = 30/253 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GG   +G AI+E     G  +     +  +  +                 + +  EQ 
Sbjct: 8   VYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTEQE 57

Query: 75  EKLMETVSSIFQ-GKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHP 132
           + ++E  +S  Q  +++ +   A       A      +    +   +  S    +KLA  
Sbjct: 58  QSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT 117

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAP 190
            LK    G++    + A +   P    YG    A++ LT  L  +     DN    +I P
Sbjct: 118 HLK--PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP 175

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQVI 249
             + T ++     +   +                    +S  +       ++   +G ++
Sbjct: 176 VTLDTPMNRKWMPNADHS-------------SWTPLSFISEHLLKWTTETSSRPSSGALL 222

Query: 250 CVDGGMTVNGFNP 262
            +      +   P
Sbjct: 223 KITTENGTSTITP 235

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  142 bits (360), Expect = 1e-40
 Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 24/243 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHT-------CSRNQTELNERLQEWKLKGLKVTGSVCD 67
           ITG  +GIG AI  E A                SR   +L +   E + +G        D
Sbjct: 7   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD 66

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHL 126
           +S      +L   +   + G ++ LVNNA V       D T  ++  T+ +TN +  F L
Sbjct: 67  ISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTM-NTNLKGTFFL 124

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++    L++   +G I FI+SVA   A   + +Y         L + +     K N+R  
Sbjct: 125 TQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 184

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
            + PG + T +   +  +                     P+++++ V       +  +  
Sbjct: 185 DVQPGAVYTPMWGKVDDEMQA--------------LMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 247 QVI 249
           ++I
Sbjct: 231 EII 233

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  144 bits (365), Expect = 2e-40
 Identities = 56/256 (21%), Positives = 92/256 (35%), Gaps = 26/256 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVC 66
           FITG +RGIG AI  + A  GA I   ++           +    +E +  G K    + 
Sbjct: 49  FITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV 108

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+   +Q    +E     F G +++LVNNA+       LDT  + +  + + N    +  
Sbjct: 109 DVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 167

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAA--PLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
           SK   P LK S    I+ IS    +          Y      M+     +  E  K  I 
Sbjct: 168 SKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE-FKGEIA 226

Query: 185 ANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
            N++ P   I T+  D +     ++            CR    D ++     +       
Sbjct: 227 VNALWPKTAIHTAAMDMLGGPGIES-----------QCRK--VDIIADAAYSIF-QKPKS 272

Query: 244 ITGQVICVDGGMTVNG 259
            TG  +  +  +   G
Sbjct: 273 FTGNFVIDENILKEEG 288

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  137 bits (346), Expect = 2e-38
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 10/237 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + G    IG  I ++ A  G  +    RN  +L   + E +  G ++     D  + ++ 
Sbjct: 12  VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEV 71

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
              +    +     L + + N    V    L+TT      +      + F   + +  L+
Sbjct: 72  TAFLNAADA--HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLM 129

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR-ANSIAPGVI 193
            A G G I F  + A +        +      +  + + +  E    NI  A+ I    +
Sbjct: 130 LAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGV 189

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVI 249
            T+     R        + G  +         P  V+     L   P +++     I
Sbjct: 190 DTAWVRERREQ------MFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTFEMEI 240

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  137 bits (348), Expect = 2e-38
 Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 23/253 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ++GG  G+G A V  L   G  +        +      E    G +      +++S +  
Sbjct: 35  VSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTNVTSEDSV 91

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----STNFESVFHLSKL 129
              +E  + +       +V +    V +  +                       +++++L
Sbjct: 92  LAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARL 150

Query: 130 AHPLLKAS------GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
               + A+        G +V  +S+AG         Y      +  LT     + +   I
Sbjct: 151 VAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGI 210

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAAS 242
           R N+IAPG ++T + +++       + +    +  P   R G PDE +   AFL      
Sbjct: 211 RVNTIAPGTMKTPIMESV-----GEEALAKFAANIPFPKRLGTPDEFADAAAFLL--TNG 263

Query: 243 YITGQVICVDGGM 255
           YI G+V+ +DG  
Sbjct: 264 YINGEVMRLDGAQ 276

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  135 bits (342), Expect = 6e-38
 Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 27/240 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG T G+G  IV++L+    +     RN     E L     +   V     D+      
Sbjct: 10  VTGATGGMGIEIVKDLSRDHIVY-ALGRNP----EHLAALA-EIEGVEPIESDIVKEVLE 63

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD-TTAEYMSTLRSTNFESVFHLSKLAHPL 133
           E  ++ + ++    ++ LV+ AAVA        + AE+ + L   N      LS+   P 
Sbjct: 64  EGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHL-DLNVIVPAELSRQLLPA 120

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIAP 190
           L+A  +G +++I+S AG       P    Y     A+  L      E+A + IR ++++P
Sbjct: 121 LRA-ASGCVIYINSGAGNGP---HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSP 176

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL-CFPAASYITGQVI 249
           G   T +   +  D                    EP E+++ + F+      + IT   +
Sbjct: 177 GPTNTPMLQGL-MDSQGTNFRPE--------IYIEPKEIANAIRFVIDAGETTQITNVDV 227

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  129 bits (327), Expect = 3e-35
 Identities = 51/242 (21%), Positives = 87/242 (35%), Gaps = 20/242 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  GIG A   E A  GA +     +Q  L + +   + +G    G VCD+   ++
Sbjct: 35  VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDE 94

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             +L +    +  G ++++ +NA + V         +    +   +     H  +   P 
Sbjct: 95  MVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR 153

Query: 134 LKASGN-GIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTKHLECEQAKDNIRANSIA 189
           L   G  G I F +S AG+         G Y      +  L + L  E   + I  + + 
Sbjct: 154 LLEQGTGGHIAFTASFAGLVPNAGL---GTYGVAKYGVVGLAETLAREVKPNGIGVSVLC 210

Query: 190 PGVIRTSL-SDAIRHDPAKNKIVEGLVSRT----PICRPGEPDEVSSLVA-------FLC 237
           P V+ T L S++ R   A   +                    D+V+ L A          
Sbjct: 211 PMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANRLYI 270

Query: 238 FP 239
            P
Sbjct: 271 LP 272

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  128 bits (323), Expect = 7e-35
 Identities = 50/214 (23%), Positives = 79/214 (36%), Gaps = 20/214 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITG   GIG     E A   + +     N+  L E   + K  G KV   V D S+RE  
Sbjct: 36  ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDI 95

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
               + V +   G +++LVNNA V    +   T    +      N  + F  +K   P +
Sbjct: 96  YSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAM 154

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYN-------GAMNQLTKHLECEQAKDNIRANS 187
             + +G IV ++S AG  +    P    Y        G    LT  L        ++   
Sbjct: 155 TKNNHGHIVTVASAAGHVS---VPFLLAYCSSKFAAVGFHKTLTDELA-ALQITGVKTTC 210

Query: 188 IAPGVIRTSLSDAIRH------DPAK--NKIVEG 213
           + P  + T              +P +  N+++ G
Sbjct: 211 LCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHG 244

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  127 bits (322), Expect = 1e-34
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 36/260 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           ITGG  G+G A  E L G GA         +    + ++    G     +  D++S +  
Sbjct: 17  ITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPADVTSEKDV 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-------KEALDTTAEYMSTLRSTNFESVFHLS 127
           +  +      F G++++ VN A +AV        K    T  ++   L   N    F++ 
Sbjct: 74  QTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD-VNLMGTFNVI 131

Query: 128 KLA------HPLLKASGNGIIVFISSVAGVT-----AAPLTPLYGPYNGAMNQLTKHLEC 176
           +L       +   +    G+I+  +SVA        AA     Y    G +  +T  +  
Sbjct: 132 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA-----YSASKGGIVGMTLPIAR 186

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAF 235
           + A   IR  +IAPG+  T L  ++       K+   L S+ P   R G+P E + LV  
Sbjct: 187 DLAPIGIRVMTIAPGLFGTPLLTSL-----PEKVCNFLASQVPFPSRLGDPAEYAHLVQA 241

Query: 236 LCFPAASYITGQVICVDGGM 255
           +      ++ G+VI +DG +
Sbjct: 242 II--ENPFLNGEVIRLDGAI 259

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  126 bits (320), Expect = 1e-34
 Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 36/259 (13%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TG + G+G A+   LA  GA +           E   E    G  V     D+++    
Sbjct: 12  VTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNADVTNEADA 68

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVP-----KEALDTTAEYMSTLRSTNFESVFHLSKL 129
              +      F G ++ LVN A  A       +        +  T+   N    F++ +L
Sbjct: 69  TAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA-VNLIGTFNMIRL 126

Query: 130 AHPLLKAS------GNGIIVFISSVA------GVTAAPLTPLYGPYNGAMNQLTKHLECE 177
           A  ++           G+IV  +S+A      G  A      Y    G +  LT     E
Sbjct: 127 AAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAA------YAASKGGVAALTLPAARE 180

Query: 178 QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFL 236
            A+  IR  +IAPG+  T +   +        + + L +  P   R G  +E ++LV  +
Sbjct: 181 LARFGIRVVTIAPGIFDTPMMAGM-----PQDVQDALAASVPFPPRLGRAEEYAALVKHI 235

Query: 237 CFPAASYITGQVICVDGGM 255
           C    + + G+VI +DG +
Sbjct: 236 C--ENTMLNGEVIRLDGAL 252

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  127 bits (322), Expect = 2e-34
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSREQ 73
           +TG ++GIG  +   LA  GA +   +R++  L + +     L           +     
Sbjct: 33  VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTF 92

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+ +     +  G L++L+ N               ++      NF S   L+  A P+
Sbjct: 93  AEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 151

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHL--ECEQAKDNIRANSI 188
           LK S  G IV +SS+AG  A    P+   Y+    A++     +  E   ++ N+     
Sbjct: 152 LKQSN-GSIVVVSSLAGKVA---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 207

Query: 189 APGVIRTSLSD 199
             G+I T  + 
Sbjct: 208 VLGLIDTETAM 218

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  125 bits (317), Expect = 3e-34
 Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 40/260 (15%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  G+G A  + L   GA +        ++   L      G +   +  D++     
Sbjct: 14  VTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAADVTDEAAV 67

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD-----TTAEYMSTLRSTNFESVFHLSKL 129
              ++   ++  G L ++VN A        L      + A +   +   N    F++ +L
Sbjct: 68  ASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVD-INLVGSFNVLRL 124

Query: 130 A-------HPLLKASGN-GIIVFISSVAGVT-----AAPLTPLYGPYNGAMNQLTKHLEC 176
           A        P+   +   G+I+  +SVA        AA     Y    G +  +T  +  
Sbjct: 125 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAA-----YSASKGGVVGMTLPIAR 179

Query: 177 EQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAF 235
           + A   IR  +IAPG+  T L  ++       +    L  + P   R G PDE  +L   
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLLASL-----PEEARASLGKQVPHPSRLGNPDEYGALAVH 234

Query: 236 LCFPAASYITGQVICVDGGM 255
           +       + G+VI +DG +
Sbjct: 235 II--ENPMLNGEVIRLDGAI 252

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  123 bits (310), Expect = 3e-33
 Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 44/258 (17%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +TGG  G+G A    L   G  +      +            +G  +     D++  E  
Sbjct: 7   VTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTREEDV 54

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALD-----TTAEYMSTLRSTNFESVFHLSKL 129
            + +       +  L  +V+ A V + ++ L          +   L   N    F++ +L
Sbjct: 55  RRAVARAQE--EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLE-VNLLGTFNVLRL 111

Query: 130 AHPLLKAS------GNGIIVFISSVAGVT-----AAPLTPLYGPYNGAMNQLTKHLECEQ 178
           A   ++ +        G+IV  +SVA        AA     Y    G +  LT     E 
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA-----YAASKGGVVALTLPAAREL 166

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLC 237
           A   IR  ++APG+  T L   +       K    L ++ P   R G P+E ++LV  + 
Sbjct: 167 AGWGIRVVTVAPGLFDTPLLQGL-----PEKAKASLAAQVPFPPRLGRPEEYAALVLHIL 221

Query: 238 FPAASYITGQVICVDGGM 255
                 + G+V+ +DG +
Sbjct: 222 --ENPMLNGEVVRLDGAL 237

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  120 bits (302), Expect = 1e-32
 Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 43/244 (17%)

Query: 8   SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
           SN     + G +  +G A+ E L     +I    R+  ++                   D
Sbjct: 1   SNAMKILLIGASGTLGSAVKERLEKKAEVITA-GRHSGDV-----------------TVD 42

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           +++ +  +K+ E V     GK++ +V+    A      + T E  +   S+      +L 
Sbjct: 43  ITNIDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            L    L   G+      + +               NGA+    K    E  +  IR N+
Sbjct: 98  LLGIDSLNDKGS--FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINT 154

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           ++P V+  S             +        P  +     E S              TG+
Sbjct: 155 VSPNVLEESWDKLEPFFEGFLPV--------PAAKVARAFEKS---------VFGAQTGE 197

Query: 248 VICV 251
              V
Sbjct: 198 SYQV 201

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  122 bits (309), Expect = 2e-32
 Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSR 71
           F+TGG  G+G  +V +L   G  +      Q  +++ L   + +  G +V G   D++SR
Sbjct: 12  FVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  +   + V + F G +++L NNA V + +   +++ +    L   N   V +      
Sbjct: 72  EGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFV 130

Query: 132 PLLKAS------GNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDN 182
           P +           G +V  +S+A   AA      G YN    A+  L++ L     K  
Sbjct: 131 PRMVERVKAGEQKGGHVVNTASMAAFLAAGSP---GIYNTTKFAVRGLSESLHYSLLKYE 187

Query: 183 IRANSIAPGVIRTSLSDAIRHDPAK 207
           I  + + PG++++ +  +    P  
Sbjct: 188 IGVSVLCPGLVKSYIYASDDIRPDA 212

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  120 bits (304), Expect = 3e-32
 Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 20/210 (9%)

Query: 8   SNEQNYFITGGTRGIGHAIVEELAGF---GAIIHTCSRNQTELNERLQEWKLKGLKVTGS 64
           S+  +  ITG  RG+G  +V+ L         + T  RN+ +  E L++       +   
Sbjct: 19  SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHIL 77

Query: 65  VCDLSSREQREKLMETVSSIFQG-KLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFES 122
             DL + +  +KL+  +  + +   LN+L NNA +A     +    ++ +     TN   
Sbjct: 78  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 137

Query: 123 VFHLSKLAHPLLKAS-----------GNGIIVFISSVAGVTAAPLTPLYGPYNG---AMN 168
              L+K   PLLK +           G   I+ +SS+ G            Y     A+N
Sbjct: 138 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 197

Query: 169 QLTKHLECEQAKDNIRANSIAPGVIRTSLS 198
             TK L  +     I   S+ PG ++T + 
Sbjct: 198 AATKSLSVDLYPQRIMCVSLHPGWVKTDMG 227

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  119 bits (300), Expect = 6e-32
 Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 11/197 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG +RGIG A    L   G  +   +R++    +RLQ    +         D+     
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPGDVREEGD 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             + +  +   F G+L+ LVNNA V V K   + T E    +  TN    F   + A P 
Sbjct: 65  WARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRANSIAP 190
           L   G G IV + S+AG            YN     +  L      +  + N+R  ++ P
Sbjct: 124 LLRRGGGTIVNVGSLAGKNP---FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP 180

Query: 191 GVIRTSLSDAIRHDPAK 207
           G + T  +        K
Sbjct: 181 GSVDTGFAGNTPGQAWK 197

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  115 bits (291), Expect = 7e-31
 Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 16/192 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG T G+G A    L G   ++    R    L E  +E     +       DL+   +
Sbjct: 4   LITGATGGLGGAFARALKGHDLLL--SGRRAGALAELARE-----VGARALPADLADELE 56

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + L+E       G L+LLV+    A      +   + +  + + +  +   +       
Sbjct: 57  AKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL----KH 107

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            +       VF  +       P    Y    GA+    +    E  ++ +    +    +
Sbjct: 108 ARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAV 167

Query: 194 RTSLSDAIRHDP 205
            T L   +   P
Sbjct: 168 ATGLWAPLGGPP 179

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  115 bits (291), Expect = 1e-30
 Identities = 44/210 (20%), Positives = 80/210 (38%), Gaps = 25/210 (11%)

Query: 11  QNYFITGGTRGIGHAIVEELA--GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
            +  +TG  RGIG  +V++L        I   +R+  +  E L+   +K  +V      +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS--IKDSRVHVLPLTV 60

Query: 69  SSREQREKLMETVSSIFQG-KLNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHL 126
           +  +  +  +  V  I     L+LL+NNA V +      +     ++     N  SV  L
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 127 SKLAHPLLKAS-----------GNGIIVFISSVAGVTAAPLTPLYGPYNG-------AMN 168
           ++   PLLK +               ++ ISS  G      +               A+N
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 169 QLTKHLECEQAKDNIRANSIAPGVIRTSLS 198
              + L  +   DN+   +  PG ++T+L 
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  113 bits (286), Expect = 6e-30
 Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 19/202 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-----WKLKGLKVTGSVCDL 68
            ITG +RGIG AI   LA  G  +   +R+     +RL++      + +G++V     D+
Sbjct: 6   VITGASRGIGEAIARALARDGYALALGARSV----DRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           S  E  E+  + V   F G ++++V NA +   K   + + E    +   N   V+   K
Sbjct: 62  SKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECEQAKDNIRA 185
                LK +G   +V  S V+        P  G Y     A   L +  + E    ++R 
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSARL----IPYGGGYVSTKWAARALVRTFQIE--NPDVRF 174

Query: 186 NSIAPGVIRTSLSDAIRHDPAK 207
             + PG + T    +    P +
Sbjct: 175 FELRPGAVDTYFGGSKPGKPKE 196

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  115 bits (290), Expect = 1e-29
 Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 26/257 (10%)

Query: 15  ITGGTRGIGHAIVEELAGFGA----------IIHTCSRNQTELNERLQEWKLKGLKVTGS 64
           +TG   GIG A     A  GA          +  + +   +     + E    G +    
Sbjct: 32  VTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD 91

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF 124
             +++  +Q   L++T    F G L++LVNNA +   +   +T+ E    + + + +  F
Sbjct: 92  GSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF 150

Query: 125 HLSKLAHPLLKASGN------GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ 178
              + A    +          G I+  SS AG+  +     Y      +  LT     E 
Sbjct: 151 ATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEM 210

Query: 179 AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF 238
            +  +  N+IAP   RT +++ +          E + ++        P+ VS LV +L  
Sbjct: 211 GRYGVTVNAIAPS-ARTRMTETV--------FAEMMATQDQDFDAMAPENVSPLVVWLGS 261

Query: 239 PAASYITGQVICVDGGM 255
             A  +TG+V  V+GG 
Sbjct: 262 AEARDVTGKVFEVEGGK 278

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  113 bits (284), Expect = 2e-29
 Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 10/222 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG AI    +  G  +   +R      ERL+   L       +  D++ +  
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKA--LNLPNTLCAQVDVTDKYT 73

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  +     I+ G  + +VNNA + +  +     A     +   N   + +  +     
Sbjct: 74  FDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP 132

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +KA   G I+ ISS+AG    P    Y     A++ +++++  E A  N+R  +IAP  +
Sbjct: 133 MKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAV 192

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           +T L         K+        R  +      D+V+  V F
Sbjct: 193 KTELLSHTTSQQIKDGYDA---WRVDMGGVLAADDVARAVLF 231

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  111 bits (281), Expect = 5e-29
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSS 70
            +TG T G G  I       G  +    R Q    ERLQE  LK   G  +  +  D+ +
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQE--LKDELGDNLYIAQLDVRN 57

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTA-EYMSTLRSTNFESVFHLSKL 129
           R   E+++ ++ + +   +++LVNNA +A+  E     + E   T+  TN + + ++++ 
Sbjct: 58  RAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             P +    +G I+ I S AG        +YG     + Q + +L  +     +R   I 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           PG++  +    +R      K  +   +   +     P++VS  V +
Sbjct: 177 PGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWW 218

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  109 bits (275), Expect = 3e-28
 Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 27/225 (12%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSS 70
            ITG + G+G  + +     G   +   R++     +L    +       V     DL+S
Sbjct: 5   VITGASSGLGAELAKLYDAEGKATYLTGRSE----SKLST--VTNCLSNNVGYRARDLAS 58

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLA 130
            ++ E+L E +        + +V++A         +   E + TL   N  S  ++ +  
Sbjct: 59  HQEVEQLFEQL----DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
               K     +++ I S A          Y     A+  L + +  E     ++  ++ P
Sbjct: 115 VKRYKDQPVNVVM-IMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           G + T   +        +                  ++ + ++  
Sbjct: 174 GGMATEFWETSGKSLDTSS-------------FMSAEDAALMIHG 205

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  108 bits (272), Expect = 2e-27
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 20/232 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHT---CSRNQTELNERLQEWK------LKGLKVTGS 64
            ITG + GIG A   E              +R      E+L+E K          KV  +
Sbjct: 37  LITGASAGIGKATALEYLEASNGDMKLILAARRL----EKLEELKKTIDQEFPNAKVHVA 92

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTA-EYMSTLRSTNFESV 123
             D++  E+ +  +E +   F   +++LVNNA  A+  + +   A E +  +  TN  ++
Sbjct: 93  QLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTAL 151

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
            ++++   P+ +A  +G IV + S+AG  A P   +Y     A+   T  L  E     I
Sbjct: 152 INITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI 211

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           R   IAPG++ T  S  +R+   + +        TP+      D+V+ L+ +
Sbjct: 212 RVILIAPGLVETEFSL-VRYRGNEEQAKNVYKDTTPL----MADDVADLIVY 258

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  107 bits (269), Expect = 3e-27
 Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 6/222 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG A    LA  GA +   +R   +L     E    G KV     D++ R+ 
Sbjct: 11  LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQG 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  + +      G L++LVNNA + +     D      + +  TN   + ++++ A P 
Sbjct: 71  VDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L     G +V +SS+AG        +Y      +N  ++ L  E  +  +R   I PG  
Sbjct: 130 LLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTT 188

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
            T L   I H   K    + +     +    +  +++  V +
Sbjct: 189 DTELRGHITHTATKEMYEQRISQIRKL----QAQDIAEAVRY 226

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  107 bits (269), Expect = 4e-27
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 17/228 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK---LKGLKVTGSVCDLSS 70
           FITG T G G A     A  G  +    R +    ERLQ          +V     D+  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRRE----ERLQALAGELSAKTRVLPLTLDVRD 80

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDT--TAEYMSTLRSTNFESVFHLSK 128
           R      ++ +   F   L  L+NNA +A+  +   +    ++ + +  TN + + + ++
Sbjct: 81  RAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMV-DTNIKGLLYSTR 138

Query: 129 LAHPLLKASGNGI-IVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           L  P L A G G  IV + SVAG    P + +YG     + Q + +L C+     +R  +
Sbjct: 139 LLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN 198

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           + PG+  +  S  +R    + +  +      PI    +P++++  + +
Sbjct: 199 LEPGLCESEFSL-VRFGGDQARYDKTYAGAHPI----QPEDIAETIFW 241

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  106 bits (268), Expect = 6e-27
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 16/231 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSR 71
            +TG + GIG A+   L   G  +  C+R    + E   E K  G    +    CDLS+ 
Sbjct: 36  LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    +   + S     +++ +NNA +A P   L  +      + + N  ++   ++ A+
Sbjct: 96  EDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 154

Query: 132 PLLKASG--NGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQLTKHLECE--QAKDNIR 184
             +K     +G I+ I+S++G    P   +   Y+    A+  LT+ L  E  +A+ +IR
Sbjct: 155 QSMKERNVDDGHIININSMSGHRVLP-LSVTHFYSATKYAVTALTEGLRQELREAQTHIR 213

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
           A  I+PGV+ T  +    HD    K          +    +P++V+  V +
Sbjct: 214 ATCISPGVVETQFAF-KLHDKDPEKAAATYEQMKCL----KPEDVAEAVIY 259

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  103 bits (258), Expect = 1e-25
 Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 9/222 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG + GIG  I  EL   GA I   +R Q  +     E +  G      V D++ R  
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
                +     + G++++LVNNA V           +    +   N + V        P+
Sbjct: 68  VAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++A  +G I+ I S+  ++  P   +Y     A+  ++  L  E    NIR   + PGV+
Sbjct: 127 MEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVV 184

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF 235
            + L+            ++       +    +P +++  V  
Sbjct: 185 ESELAG-TITHEETMAAMDTY-RAIAL----QPADIARAVRQ 220

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  106 bits (266), Expect = 3e-25
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 29/250 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA---------IIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           ITG   G+G     E A  GA          ++    N    +  + E    G     +V
Sbjct: 13  ITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---AV 69

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
            D ++    +K++ET    F G +++++NNA +         T +    +   +    F 
Sbjct: 70  ADYNNVLDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFA 128

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           ++K A P  +    G IV  SS AG+        Y     A+    + L  E AK NI+A
Sbjct: 129 VTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKA 188

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+IAP + R+ ++++I   P                    P++V+ LV +L       +T
Sbjct: 189 NAIAP-LARSRMTESIMPPPML--------------EKLGPEKVAPLVLYLSSAEN-ELT 232

Query: 246 GQVICVDGGM 255
           GQ   V  G 
Sbjct: 233 GQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 96.3 bits (240), Expect = 7e-22
 Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 25/244 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            ITG   G+G    +  A +GA  +++    +  +  + + E K  G +      D++  
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKVVVN----DFKDATKTVDEIKAAGGEAWPDQHDVA-- 379

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +  E +++ V   + G +++LVNNA +   +     + +   +++  +    F+LS+LA 
Sbjct: 380 KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAW 438

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P       G I+ I+S +G+        Y      +  L+K +  E AK+NI+ N +AP 
Sbjct: 439 PYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP- 497

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
              T+++ +I  +  K                   D+V+ L+ +L       +TG+   +
Sbjct: 498 HAETAMTLSIMREQDK--------------NLYHADQVAPLLVYLGTDDV-PVTGETFEI 542

Query: 252 DGGM 255
            GG 
Sbjct: 543 GGGW 546

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  100 bits (252), Expect = 2e-24
 Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 29/250 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGA---------IIHTCSRNQTELNERLQEWKLKGLKVTGSV 65
           +TG   G+G A     A  GA               +  +  ++ ++E + +G K   +V
Sbjct: 14  VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AV 70

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFH 125
            +  S E  EKL++T    F G+++++VNNA +   +     + E    ++  +    F 
Sbjct: 71  ANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQ 129

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
           +++ A   +K    G I+  +S +G+        Y      +  L   L  E  K+NI  
Sbjct: 130 VTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHC 189

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
           N+IAP    + +++ +  +     +              +P+ V+ LV +LC  +     
Sbjct: 190 NTIAPN-AGSRMTETVMPEDLVEAL--------------KPEYVAPLVLWLCHESC-EEN 233

Query: 246 GQVICVDGGM 255
           G +  V  G 
Sbjct: 234 GGLFEVGAGW 243

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 99.4 bits (248), Expect = 3e-24
 Identities = 54/265 (20%), Positives = 91/265 (34%), Gaps = 58/265 (21%)

Query: 15  ITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG +GIG AIV +L   F   +   +R+ T     +Q+ + +GL       D+   + 
Sbjct: 9   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L + +   + G L++LVNNA +A                  TNF     +     PL
Sbjct: 69  IRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 127

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLY------------------------------GPY 163
           +K  G   +V +SS+  V A                                        
Sbjct: 128 IKPQGR--VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK 185

Query: 164 NG-----------AMNQLTKH----LECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN 208
            G            +  L++     L  ++  D I  N+  PG +RT ++        K+
Sbjct: 186 EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA---GPKATKS 242

Query: 209 KIVEGLVSRTPI---CRPGEPDEVS 230
              EG  + TP+     P + +   
Sbjct: 243 -PEEG--AETPVYLALLPPDAEGPH 264

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 97.0 bits (242), Expect = 3e-23
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 4/193 (2%)

Query: 8   SNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD 67
            + + + +TG + G G AI E     G  +   +R    L++ +  +  +   ++    D
Sbjct: 3   ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LD 59

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           ++  E+ + +   V + + G++++LVNNA         +TT   +  L   +      L+
Sbjct: 60  VTDGERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLT 118

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           +   P ++  G+G +V ISS  G  +      Y     A+ QL++ L  E A   I+   
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 188 IAPGVIRTSLSDA 200
           + PG  RT+L   
Sbjct: 179 VEPGAFRTNLFGK 191

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 94.0 bits (234), Expect = 7e-22
 Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 37/242 (15%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHT---CSRN---QTELNERLQEWKLKGLKVTGSVCD 67
            ITG + GIG  +   LA   +         R+   Q  L E  +        +     D
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           +   +           + +G++++LV NA + +         + ++++   N      + 
Sbjct: 66  VRDSKSVA---AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--------LECEQA 179
           +   P +K  G+G ++   SV G+      P    Y       +K         L     
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMG---LPFNDVYCA-----SKFALEGLCESLAVLLL 174

Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR------------PGEPD 227
              +  + I  G + T+  + +   P +      + +     +               P+
Sbjct: 175 PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPE 234

Query: 228 EV 229
           EV
Sbjct: 235 EV 236

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 93.7 bits (233), Expect = 8e-22
 Identities = 46/229 (20%), Positives = 88/229 (38%), Gaps = 22/229 (9%)

Query: 1   MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-----WK 55
           M   +         ITG + G G    E LAG G  ++   R+    N    E      +
Sbjct: 3   MSKKII-------LITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR 55

Query: 56  LKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMS 113
              + +     D+ S+   ++ ++ +     G++++L++NA   V  P E    T E  +
Sbjct: 56  DNDVDLRTLELDVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAE--AFTPEQFA 112

Query: 114 TLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG---AMNQL 170
            L   N  S   +++ A P ++   +G++++ISS +     P  P   PY     AM+ +
Sbjct: 113 ELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--PYLAPYFAAKAAMDAI 170

Query: 171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP 219
                 E ++  I  + I PG   +  +         +   +      P
Sbjct: 171 AVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP 219

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 84.9 bits (211), Expect = 3e-19
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 29/253 (11%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           R +G AI  +L   GA +  +         ERL+    K  +  G       D++  E+ 
Sbjct: 20  RSLGFAIAAKLKEAGAEVALSY------QAERLRPEAEKLAEALGGALLFRADVTQDEEL 73

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE--------SVFHL 126
           + L   V   F G L+ LV+  A A P+EA++    Y+ T R  ++         S+  +
Sbjct: 74  DALFAGVKEAF-GGLDYLVHAIAFA-PREAME--GRYIDTRRQ-DWLLALEVSAYSLVAV 128

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++ A PLL+    G IV ++  A     P   +      A+    ++L  E     +R N
Sbjct: 129 ARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVN 186

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G +RT  + +I       K+ + +    P+ R    +EV +L  FL  P AS ITG
Sbjct: 187 AISAGPVRTVAARSIPG---FTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITG 243

Query: 247 QVICVDGGMTVNG 259
           +V+ VD G  + G
Sbjct: 244 EVVYVDAGYHIMG 256

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 85.4 bits (212), Expect = 4e-19
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 28/253 (11%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           R I + I +     GA +  T          +L++   +  K  GS     CD+S  E  
Sbjct: 33  RSIAYGIAKSFHREGAQLAFTY------ATPKLEKRVREIAKGFGSDLVVKCDVSLDEDI 86

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + L + +   + G L+++V++ A A PKE        + T R   F+     SV+    L
Sbjct: 87  KNLKKFLEENW-GSLDIIVHSIAYA-PKEEFK--GGVIDTSRE-GFKIAMDISVYSLIAL 141

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++   PL++    G IV +S        P   + G    A+    ++L  + AK   R N
Sbjct: 142 TRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRIN 200

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G ++T  + +I      + ++E      P  +P   ++V     FLC   A  ITG
Sbjct: 201 AISAGPVKTLAAYSITG---FHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITG 257

Query: 247 QVICVDGGMTVNG 259
           +V+ VD G  + G
Sbjct: 258 EVVHVDNGYHIMG 270

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 84.9 bits (211), Expect = 4e-19
 Identities = 51/253 (20%), Positives = 108/253 (42%), Gaps = 28/253 (11%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
             I + I + +   GA +  T        N++L+    +     GS     CD++     
Sbjct: 21  LSIAYGIAQAMHREGAELAFTY------QNDKLKGRVEEFAAQLGSDIVLQCDVAEDASI 74

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + +   +  ++  K +  V++   A P + LD   +Y++ +    F+     S +    +
Sbjct: 75  DTMFAELGKVW-PKFDGFVHSIGFA-PGDQLD--GDYVNAVTREGFKIAHDISSYSFVAM 130

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K    +L       ++ +S +    A P   + G    ++    +++      + +R N
Sbjct: 131 AKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVN 188

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G IRT  +  I+      K++    + TPI R    ++V +  AFLC   ++ I+G
Sbjct: 189 AISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG 245

Query: 247 QVICVDGGMTVNG 259
           +V+ VDGG ++  
Sbjct: 246 EVVHVDGGFSIAA 258

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 85.0 bits (211), Expect = 6e-19
 Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 35/264 (13%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           + +   I + +   GA +  T       L+E  ++      +  G      CD+S  E  
Sbjct: 42  KSLAWGIAKAVCAQGAEVALTY------LSETFKKRVDPLAESLGVKLTVPCDVSDAESV 95

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + + + ++  + G L+ +V+  A +  K  L     Y+ T    NF      S +   ++
Sbjct: 96  DNMFKVLAEEW-GSLDFVVHAVAFS-DKNELK--GRYVDTSLG-NFLTSMHISCYSFTYI 150

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY---GPYNGAMNQLTKHLECEQAKDNI 183
           +  A PL+     G I+ +S           P Y   G    A+    K+L  +  K  I
Sbjct: 151 ASKAEPLMT--NGGSILTLSYYGAEKV---VPHYNVMGVCKAALEASVKYLAVDLGKQQI 205

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+I+ G +RT  S  I      + I+      +P+ R    D+V     +L       
Sbjct: 206 RVNAISAGPVRTLASSGISD---FHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRG 262

Query: 244 ITGQVICVDGGMTVNGFNPTCCPN 267
            TG+ + VD G  V G      P+
Sbjct: 263 TTGETVHVDCGYHVVGMKSVDAPD 286

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 84.2 bits (209), Expect = 8e-19
 Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 35/259 (13%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           + I + I +     GA +  T       LNE L++      +   S      D+S  E  
Sbjct: 18  KSIAYGIAQSCFNQGATLAFTY------LNESLEKRVRPIAQELNSPYVYELDVSKEEHF 71

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + L  +V     G L+ +V++ A A PKEAL+     + T +S  F      SV+    L
Sbjct: 72  KSLYNSVKKDL-GSLDFIVHSVAFA-PKEALE--GSLLETSKS-AFNTAMEISVYSLIEL 126

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY---GPYNGAMNQLTKHLECEQAKDNI 183
           +    PLL       ++ +S +           Y   G    A+    ++L  +  K +I
Sbjct: 127 TNTLKPLLNN--GASVLTLSYLGSTKY---MAHYNVMGLAKAALESAVRYLAVDLGKHHI 181

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+++ G IRT  S  I        I++      P+ +    +EV +   +L    +S 
Sbjct: 182 RVNALSAGPIRTLASSGIAD---FRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 238

Query: 244 ITGQVICVDGGMTVNGFNP 262
           ++G+V  VD G  V G   
Sbjct: 239 VSGEVHFVDAGYHVMGMGA 257

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 27/248 (10%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV------CDLSSRE 72
           R I   + + L   GA ++ T         ER ++   K L+            D+ S E
Sbjct: 44  RSIAFGVAKVLDQLGAKLVFTY------RKERSRKELEKLLEQLNQPEAHLYQIDVQSDE 97

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-----DTTAE-YMSTLRSTNFESVFHL 126
           +     E +     G ++ + ++ A A   E L     +T+ E ++     +++ S+  +
Sbjct: 98  EVINGFEQIGKDV-GNIDGVYHSIAFA-NMEDLRGRFSETSREGFLLAQDISSY-SLTIV 154

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +  A  L+     G IV  + + G  A     + G    ++    K+L  +   DNIR N
Sbjct: 155 AHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVN 212

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G IRT  +  +      N I++ +  R P+ R  +  EV    A+L    +S +TG
Sbjct: 213 AISAGPIRTLSAKGVGG---FNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTG 269

Query: 247 QVICVDGG 254
           + I VD G
Sbjct: 270 ENIHVDSG 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 37/261 (14%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW--KL-KGLKVTGSV---CDLSSRE 72
           R I   I   L   GA +I T         ERL++   +L   L    S+   CD+++  
Sbjct: 19  RSIAWGIARSLHEAGARLIFTY------AGERLEKSVHELAGTLDRNDSIILPCDVTNDA 72

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF--- 124
           + E    ++     G ++ + +  A A  KE L    EY++T R   F      S +   
Sbjct: 73  EIETCFASIKEQV-GVIHGIAHCIAFA-NKEELV--GEYLNTNRD-GFLLAHNISSYSLT 127

Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY---GPYNGAMNQLTKHLECEQAKD 181
            + K A P++     G IV ++ + G       P Y   G    +++   K+L  +  K+
Sbjct: 128 AVVKAARPMMTE--GGSIVTLTYLGGELV---MPNYNVMGVAKASLDASVKYLAADLGKE 182

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           NIR NSI+ G IRT  +  I      N I++ +  R P+ R   P+EV    AFL    +
Sbjct: 183 NIRVNSISAGPIRTLSAKGISD---FNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMS 239

Query: 242 SYITGQVICVDGGMTVNGFNP 262
             ITG+ + VD G  +     
Sbjct: 240 RGITGENLHVDSGFHITARLE 260

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 59/264 (22%), Positives = 101/264 (38%), Gaps = 35/264 (13%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           R I   I +     GA +  T         + L++      +  G+     CD++     
Sbjct: 43  RSIAWGIAKAAREAGAELAFTY------QGDALKKRVEPLAEELGAFVAGHCDVADAASI 96

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + + ET+   + GKL+ LV+    +  K+ L     Y+ T  + NF      SV+    +
Sbjct: 97  DAVFETLEKKW-GKLDFLVHAIGFS-DKDELT--GRYIDTSEA-NFTNTMLISVYSLTAV 151

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY---GPYNGAMNQLTKHLECEQAKDNI 183
           S+ A  L+     G I+ ++           P Y   G    A+    K+L  +    NI
Sbjct: 152 SRRAEKLMAD--GGSILTLTYYGAEKV---MPNYNVMGVAKAALEASVKYLAVDLGPQNI 206

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           R N+I+ G I+T  +  I        I++      P+ R    DEV  +  +     +  
Sbjct: 207 RVNAISAGPIKTLAASGIGD---FRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRS 263

Query: 244 ITGQVICVDGGMTVNGFNPTCCPN 267
           +TG+V   D G  V G      P+
Sbjct: 264 VTGEVHHADSGYHVIGMKAVDAPD 287

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 86.0 bits (213), Expect = 2e-18
 Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 23/246 (9%)

Query: 15  ITGGTRGIGHAIVEELAGFGAII----HTCSRNQTELNERLQEWKLKGLKVTG--SVCDL 68
           +TG   G+G       A  GA +       + +    ++R  +  +  ++  G  +V D 
Sbjct: 24  VTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADY 83

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           +S     K++ET    F G++++LVNNA +   +  + T+ +  + +   + +  F  ++
Sbjct: 84  NSVIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQ 142

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
            A P +K    G I+  SS +G+        Y      +  L   +  E A++N+  N I
Sbjct: 143 AAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVI 202

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            P    + +++ I  D   N                +P  ++ +VA+LC  +     G  
Sbjct: 203 VPTA-ASRMTEGILPDILFN--------------ELKPKLIAPVVAYLCHESCE-DNGSY 246

Query: 249 ICVDGG 254
           I    G
Sbjct: 247 IESAAG 252

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 83.1 bits (205), Expect = 4e-18
 Identities = 50/270 (18%), Positives = 90/270 (33%), Gaps = 85/270 (31%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQ 73
           +TGG +GIG  I ++L+  G ++    R+ T+ +E +++ K      V     D++    
Sbjct: 17  VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIA 76

Query: 74  -REKLMETVSSIFQGKLNLLVNNAAVA------------------------------VPK 102
               L + + + F GKL++LVNNA VA                                +
Sbjct: 77  TMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQ 135

Query: 103 EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY-- 160
           E +  T E        N+  V  ++++  PLL+ S +  IV +SS  G            
Sbjct: 136 ELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALE 195

Query: 161 --------------------------------GPYNG---------AMNQLTKHLECEQA 179
                                           G  +           +N  T+ L    A
Sbjct: 196 ILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL----A 251

Query: 180 K--DNIRANSIAPGVIRTSLSDAIRHDPAK 207
                 + N + PG+++T ++         
Sbjct: 252 NKIPKFQVNCVCPGLVKTEMN---YGIGNY 278

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 81.5 bits (202), Expect = 9e-18
 Identities = 51/256 (19%), Positives = 109/256 (42%), Gaps = 34/256 (13%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV-CDLSSREQREKL 77
           + I + I + +   GA +  T      +  +R+++           + CD+ S ++ + L
Sbjct: 38  KSIAYGIAKAMHREGAELAFTY---VGQFKDRVEKL-CAEFNPAAVLPCDVISDQEIKDL 93

Query: 78  METVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HLSKL 129
              +  ++   L+ +V++ A A P++ L+    ++  +    F      S +    L+K 
Sbjct: 94  FVELGKVW-DGLDAIVHSIAFA-PRDQLE--GNFIDCVTREGFSIAHDISAYSFAALAKE 149

Query: 130 AHPLLKASGNGIIVFISSVAGVT---AAPLTPLY---GPYNGAMNQLTKHLECEQAKDNI 183
              ++K          +S+  +T   A    P Y   G    ++    ++      +D I
Sbjct: 150 GRSMMKNRN-------ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGI 202

Query: 184 RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           + N+++ G I+T  +  I +     K+++     +P+ +  +  EV + VAFLC   A+ 
Sbjct: 203 KVNAVSAGPIKTLAASGISN---FKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATG 259

Query: 244 ITGQVICVDGGMTVNG 259
           ITG+V+ VD G     
Sbjct: 260 ITGEVVHVDAGYHCVS 275

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 81.1 bits (201), Expect = 9e-18
 Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 28/253 (11%)

Query: 20  RGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSV----CDLSSREQR 74
           R I + I +     GA +  T       + +R ++   +     GS     CD++   Q 
Sbjct: 26  RSIAYGIAKACKREGAELAFTY------VGDRFKDRITEFAAEFGSELVFPCDVADDAQI 79

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE-----SVF---HL 126
           + L  ++ + +   L+ LV++   A P+EA+    +++  L   NF      S +    L
Sbjct: 80  DALFASLKTHW-DSLDGLVHSIGFA-PREAIA--GDFLDGLTRENFRIAHDISAYSFPAL 135

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K A P+L    +  ++ +S +    A P     G    A+    ++L        +R N
Sbjct: 136 AKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVN 193

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G I+T  +  I+      KI++ + S +P+ R    ++V +  AFL    AS +T 
Sbjct: 194 AISAGPIKTLAASGIKS---FGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTA 250

Query: 247 QVICVDGGMTVNG 259
           +V+ VD G     
Sbjct: 251 EVMHVDSGFNAVV 263

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 34/212 (16%)

Query: 66  CDLSSREQREKLMETVSSIF--QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV 123
            D+ + E    L   V+       KL+ +V++     P+  +     +     + +    
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM-PQTGMGI-NPFFDAPYA-DVSKG 119

Query: 124 FHLS--------KLAHPLLKASGNGIIVFISSVAGVT--AAPLTPLY---GPYNGAMNQL 170
            H+S        K   P++   G        S+ G+    +   P Y        A+  +
Sbjct: 120 IHISAYSYASMAKALLPIMNPGG--------SIVGMDFDPSRAMPAYNWMTVAKSALESV 171

Query: 171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-------NKIVEGLVSRTPICR- 222
            + +  E  K  +R+N +A G IRT    AI               + EG   R PI   
Sbjct: 172 NRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN 231

Query: 223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
             +   V+  V  L        TG +I  DGG
Sbjct: 232 MKDATPVAKTVCALLSDWLPATTGDIIYADGG 263

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 73.7 bits (181), Expect = 6e-15
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 30/215 (13%)

Query: 66  CDLSSREQREKLME-TVSSIFQ------GKLNLLVNNAAVA--VPKEALDTTAE-YMSTL 115
            ++SS ++   +   T+S + +      G++++LV++ A    V K  L T+ + Y++ +
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163

Query: 116 RSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLE 175
            S+++ S   L +   PL+K    G  + +S +A     P       Y G M+     LE
Sbjct: 164 SSSSY-SFVSLLQHFLPLMKE--GGSALALSYIASEKVIP------GYGGGMSSAKAALE 214

Query: 176 CEQ--------AKDNIRANSIAPGVIRTSLSDAI---RHDPAKNKIVEGLVSRTPICRPG 224
            +             +R N I+ G +++  + AI         +  ++   +  P+ +  
Sbjct: 215 SDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKEL 274

Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
           E D+V     FL  P A  +TG  + VD G+   G
Sbjct: 275 ESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 72.8 bits (179), Expect = 9e-15
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 24/202 (11%)

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVA--VPKEALDTTAE-YMSTLRSTNFESVFH 125
           SS    ++  E V   F G +++LV++ A    V K  L+T+ + Y++ + ++++ S   
Sbjct: 101 SSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSY-SFVS 158

Query: 126 LSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ------- 178
           L     P++     G  + ++ +A     P       Y G M+     LE +        
Sbjct: 159 LLSHFLPIMNP--GGASISLTYIASERIIP------GYGGGMSSAKAALESDTRVLAFEA 210

Query: 179 -AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC 237
             K NIR N+I+ G + +  + AI      + ++E   +  PI +    DEV +  AFL 
Sbjct: 211 GRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYSYNNAPIQKTLTADEVGNAAAFLV 267

Query: 238 FPAASYITGQVICVDGGMTVNG 259
            P AS ITG  I VD G+   G
Sbjct: 268 SPLASAITGATIYVDNGLNSMG 289

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 71.0 bits (174), Expect = 6e-14
 Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 30/215 (13%)

Query: 66  CDLSSREQREKLME-TVSSIFQ------GKLNLLVNNAAVA--VPKEALDTTAE-YMSTL 115
            D+   ++   +   T+  +        G +++LV++ A    V K  L+T+ + Y++  
Sbjct: 91  QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAAS 150

Query: 116 RSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLE 175
            ++ + S   L +   P++     G  V +S +A     P       Y G M+     LE
Sbjct: 151 SNSAY-SFVSLLQHFGPIMNE--GGSAVTLSYLAAERVVP------GYGGGMSSAKAALE 201

Query: 176 CEQ--------AKDNIRANSIAPGVIRTSLSDAIRHDPAK---NKIVEGLVSRTPICRPG 224
            +          K  +R N+I+ G +++  + AI     K   +  ++   +  P+ R  
Sbjct: 202 SDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDL 261

Query: 225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
             D+V     FL  P A  ++G  + VD G+   G
Sbjct: 262 HSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG 296

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 51/216 (23%), Positives = 75/216 (34%), Gaps = 52/216 (24%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           ITG   G+G     ELA  GA +I    R+  +     +   + G +V     DL     
Sbjct: 21  ITGANSGLGAVTARELARRGATVIMAV-RDTRKGEAAART--MAG-QVEVRELDLQDLSS 76

Query: 74  REKLMETVSSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVF------H- 125
             +  + VS       ++L+NNA + AVP      T +         FES        H 
Sbjct: 77  VRRFADGVS-----GADVLINNAGIMAVPYA---LTVD--------GFESQIGTNHLGHF 120

Query: 126 -LSKLAHPLLKASGNGIIVFISSVAGVTAAP----LTPLYGPYNGAM--------NQL-T 171
            L+ L  P L       +V +SS+A          L      Y+  +        N L T
Sbjct: 121 ALTNLLLPRLTDR----VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFT 176

Query: 172 KHLE--CEQAKDNIRANSIAPGVIRTSLSDAIRHDP 205
             L+     A   +RA +  PG   T+L        
Sbjct: 177 SELQRRLTAAGSPLRALAAHPGYSHTNLQ---GASG 209

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 55.7 bits (134), Expect = 7e-09
 Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 61/246 (24%)

Query: 66  CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVA--VPKEALDTTAE-YMSTLRSTNFES 122
            ++      E +   +   + GK+N+LV++ A A  V K+ L+T+ + Y+  L  +++ S
Sbjct: 92  YNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY-S 149

Query: 123 VFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ---- 178
           +  L K    ++K      I+ ++  A     P       Y G M+     LE +     
Sbjct: 150 LISLCKYFVNIMK--PQSSIISLTYHASQKVVP------GYGGGMSSAKAALESDTRVLA 201

Query: 179 ----AKDNIRANSIAPGVIRTSLSDAIRH------------------------------- 203
                  NIR N+I+ G +++  + AI                                 
Sbjct: 202 YHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKE 261

Query: 204 ---------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG 254
                        +  +E      P+ +     ++ S+ +FL    +  ITGQ I VD G
Sbjct: 262 EKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNG 321

Query: 255 MTVNGF 260
           + +   
Sbjct: 322 LNIMFL 327

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 9/84 (10%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +  GT  +G      LAG GA +  C R   +          +  KV  +  + +    
Sbjct: 123 VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDAS 181

Query: 74  REKLMETVSSIFQGKLNLLVNNAA 97
           R + ++          + +    A
Sbjct: 182 RAEAVKGA--------HFVFTAGA 197

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 50.3 bits (120), Expect = 8e-07
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 28/183 (15%)

Query: 5    VWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTC-SR---NQTELNERLQEWKLKGLK 60
             +    ++Y ITGG  G G  + + L   GA      SR          +++EW+ +G++
Sbjct: 1879 TFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQ 1938

Query: 61   VTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNF 120
            V  S  + SS +    L+   +    G +  + N A V      L      +       F
Sbjct: 1939 VLVSTSNASSLDGARSLITEATQ--LGPVGGVFNLAMV------LRDAV--LENQTPEFF 1988

Query: 121  ESVF--------HLSKLAHPLLKASGNGIIVFI--SSVAGVTAAPLTPLYGPYNGAMNQL 170
            + V         +L      + + +   +  F+  SSV+          YG  N AM ++
Sbjct: 1989 QDVSKPKYSGTANL----DRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERI 2044

Query: 171  TKH 173
             + 
Sbjct: 2045 CEK 2047

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 68/267 (25%)

Query: 1   MYSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK 60
           M   ++W       +          ++E L     +++    N T  ++     KL+   
Sbjct: 180 MDFKIFW-------LNLKNCNSPETVLEMLQ---KLLYQIDPNWTSRSDHSSNIKLR--- 226

Query: 61  VTGSVCDLSSREQREKLMETVSSIFQGKLNLL----VNNAAVAVPKEALDTTAEYMSTLR 116
              S+     R  + K           +  LL    V NA       A + + +    L 
Sbjct: 227 -IHSIQAELRRLLKSK---------PYENCLLVLLNVQNAKAW---NAFNLSCK---ILL 270

Query: 117 STNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLEC 176
           +T F+ V          L A+    I             LTP         + L K+L+C
Sbjct: 271 TTRFKQVTDF-------LSAATTTHISLDHHSMT-----LTPDE-----VKSLLLKYLDC 313

Query: 177 EQAKDNIRANSIAP---GVIRTSLSDAI------RH--DPAKNKIVEGLVSRTPICRPGE 225
                     +  P    +I  S+ D +      +H        I+E  ++        E
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL------E 367

Query: 226 PDEVSSL-VAFLCFPAASYITGQVICV 251
           P E   +      FP +++I   ++ +
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSL 394

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 45/182 (24%)

Query: 13  YFITGGTRGIGHAIVEELA---GFGAIIHTCSR---NQTELNERLQEWKLKGLKVTGSVC 66
             +TGGT  +G  +   L    G   ++   SR     +   E + +    G +V+   C
Sbjct: 533 VLVTGGTGALGAEVARHLVIERGVRNLVLV-SRRGPAASGAAELVAQLTAYGAEVSLQAC 591

Query: 67  DLSSREQREKLMETVSS------IFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTN 119
           D++ RE   K++ ++        +           A V      L D  +E ++      
Sbjct: 592 DVADRETLAKVLASIPDEHPLTAVVHA--------AGV------LDDGVSESLT---VER 634

Query: 120 FESVF--------HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT 171
            + V         +L +L  P +       +V  SSV+GV  +     Y   N  ++ L 
Sbjct: 635 LDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANSFLDALA 688

Query: 172 KH 173
           + 
Sbjct: 689 QQ 690

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 13  YFITGGTRGIGHAIVEELAGFGA---------------IIHTCSRNQTELNERLQEWKLK 57
             +TG            LA  GA                  + +   + L   + E    
Sbjct: 254 VLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL 313

Query: 58  GLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRS 117
           G   T   CDL+  E   +L+  VS      L+ +++       +    T A+ ++ + +
Sbjct: 314 GATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVDSEPLAATDADALARVVT 371

Query: 118 TNFESVFHLSKL-AHPLLKASGNGIIVFISSVAGVTAAP 155
               +  HL +L            ++V  SSVA +    
Sbjct: 372 AKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA 410

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	367
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.85
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.85
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.83
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.82
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.82
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.81
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.8
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.75
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.75
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.73
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.73
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.72
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.71
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.67
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.67
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.64
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.55
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.27
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.27
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.84
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.79
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.69
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.69
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.62
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.48
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.45
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.42
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.41
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.41
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.4
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.31
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.3
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.29
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.23
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.23
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.22
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.21
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.17
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.16
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.14
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.12
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.1
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.1
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.09
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.06
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.04
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.02
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.97
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.91
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.89
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.86
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.85
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.83
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.83
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.83
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.81
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.8
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.79
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.79
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.79
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.78
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.77
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.76
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.74
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.68
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.67
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.66
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.58
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.58
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.55
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.55
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.51
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.48
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.44
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.37
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.36
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.36
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.36
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.35
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.32
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.31
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.27
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.22
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.21
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.21
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.2
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.18
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.16
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.14
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.14
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.11
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.1
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.07
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.05
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.01
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.01
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.97
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.97
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.97
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.88
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.84
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.83
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.82
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.82
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.82
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.81
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.78
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.76
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.72
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.7
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.68
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.68
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.66
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.64
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.63
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.63
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.6
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.6
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.59
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.58
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.58
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.56
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.45
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.43
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.42
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.4
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.39
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.37
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.35
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.35
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.34
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.31
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.3
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.28
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.26
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.22
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.22
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.18
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.16
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.13
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.12
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.11
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.09
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.04
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.04
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.03
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.98
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.9
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.9
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.89
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.81
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.77
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.76
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.72
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.72
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.7
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.69
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.55
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.53
1lnq_A	336	MTHK channels, potassium channel related protein;	95.52
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.38
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.36
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.32
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.31
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.24
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.2
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.19
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.09
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.0
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.99
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.97
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	94.9
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.88
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	94.84
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	94.82
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.81
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	94.74
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.71
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.71
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.7
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	94.61
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.48
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.43
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	94.38
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.34
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.21
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.19
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.16
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	94.12
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	94.09
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.07
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	94.02

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=7.1e-57  Score=413.15  Aligned_cols=249  Identities=24%  Similarity=0.382  Sum_probs=228.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|++++++++.++++..+.++.++++|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35677 99999999999999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|++++.|+|||+||.++..+.++..+|++||
T Consensus        83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence             99999999999875 4678999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+.+|+|++|.|++++|||||+|+||+++|++.......... ..........|.+|+++|+|+|++++||+|++++|+
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~i  240 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSEL-GMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV  240 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHH-HHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHH-HHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            9999999999999999999999999999999987655433221 122223345788999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.||||+++
T Consensus       241 TG~~i~VDGG~t~  253 (254)
T 4fn4_A          241 NGDAVVVDGGLTV  253 (254)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEeCCCccc
Confidence            9999999999976

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=5.7e-57  Score=413.99  Aligned_cols=248  Identities=29%  Similarity=0.396  Sum_probs=233.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|+++| ++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++.+++||++|+++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            368888 9999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      | |++|+||||||+....++.+.+.++|++++++|+.|+|+++|+++|+|.+ +++|+|||+||.++..+.++..+|++|
T Consensus        84 ~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (255)
T 4g81_D           84 G-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA  162 (255)
T ss_dssp             T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             C-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence            9 89999999999999999999999999999999999999999999999965 467999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+|+|++|.|++++|||||+|+||+++|++.......+.   ..+.+....|++|+++|+|+|++++||+|++++|
T Consensus       163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~---~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQ---FDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHH---HHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHH---HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999999999999876654433   5566778899999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      +||+.|.||||+..
T Consensus       240 iTG~~i~VDGG~~A  253 (255)
T 4g81_D          240 INGQIIYVDGGWLA  253 (255)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeEe
Confidence            99999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=6.8e-55  Score=403.81  Aligned_cols=244  Identities=25%  Similarity=0.360  Sum_probs=220.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++++.++| 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4677 9999999999999999999999999999999999998888777   6678899999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++  .|+||++||.++..+.++..+|++||+|
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaa  179 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAA  179 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHH
Confidence            99999999999998899999999999999999999999999999999965  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh--hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP--AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +.+|+|++|.|++++|||||+|+||+++|++........  ..+...+.+....|++|+++|+|||++++||+|++++|+
T Consensus       180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~i  259 (273)
T 4fgs_A          180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV  259 (273)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999999999999999999887654332  223455667788999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.||||++.
T Consensus       260 TG~~i~VDGG~s~  272 (273)
T 4fgs_A          260 TGAELFVDGGSAQ  272 (273)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCCeEeECcChhh
Confidence            9999999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-55  Score=401.33  Aligned_cols=242  Identities=27%  Similarity=0.386  Sum_probs=221.4

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.|+++| ++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++.+.+.++.++.+|++|+++++++++    
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST----
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH----
Confidence            3578888 9999999999999999999999999999999864  35566777778899999999999999888774    


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                       + +++|+||||||+....++.+.+.++|++++++|+.|+|+++|+++|+|.+++ .|+|||+||.++..+.++..+|++
T Consensus        77 -~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           77 -D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             -T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             -h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHH
Confidence             3 7899999999999889999999999999999999999999999999997654 799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+.+|+|++|.|++++|||||+|+||+++||+.......+.   ..+.+.+..|++|+++|+|||++++||+|++++
T Consensus       155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~---~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~  231 (247)
T 4hp8_A          155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAA---RNKAILERIPAGRWGHSEDIAGAAVFLSSAAAD  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH---HHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHH---HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999876654433   456677889999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      |+||+.|.||||+..
T Consensus       232 ~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          232 YVHGAILNVDGGWLA  246 (247)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCeEEECccccc
Confidence            999999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6e-54  Score=395.25  Aligned_cols=249  Identities=28%  Similarity=0.317  Sum_probs=218.8

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.+.++.++.||++|+++++++++++.++
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            367887 9999999999999999999999999999999987754 34556666788999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      | |++|+||||||+..... .+.+.++|++++++|+.|+++++|+++|+|+++ +|+|||+||.++..+.++..+|++||
T Consensus        81 ~-G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           81 F-GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             H-SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHH
Confidence            9 99999999999875444 478999999999999999999999999999765 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhcCCCC-CCCCHHHHHHHHHHHhCCCCC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~-~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +|+.+|+|++|.|++++|||||+|+||+++|++........ ..++..+.+....|++ |+++|+|||++++||+|++++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999987654322 2223556677889985 999999999999999999999


Q ss_pred             CccccEEEeCCCcccc
Q 035642          243 YITGQVICVDGGMTVN  258 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~  258 (367)
                      |+||+.|.||||++..
T Consensus       238 ~iTG~~i~VDGG~T~l  253 (258)
T 4gkb_A          238 HTTGEWLFVDGGYTHL  253 (258)
T ss_dssp             TCCSCEEEESTTTTTS
T ss_pred             CccCCeEEECCCcchh
Confidence            9999999999999743

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.1e-53  Score=386.34  Aligned_cols=231  Identities=33%  Similarity=0.540  Sum_probs=206.0

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +| ++|||||++|||+++|++|+++|++|++++|+.+++++      ..+.++..+.+|++|++++++++++    + |+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~----~-g~   78 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEA----L-PR   78 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHH----C-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHh----c-CC
Confidence            46 99999999999999999999999999999999876542      2356889999999999999888764    5 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||+..  ++.+.+.++|++++++|+.|+++++|+++|+|+++ +|+|||+||.++..+.++..+|++||+|+.
T Consensus        79 iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~  155 (242)
T 4b79_A           79 LDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIV  155 (242)
T ss_dssp             CSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHH
Confidence            999999999863  56788999999999999999999999999999765 599999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +|+|++|.|++++|||||+|+||+++|||.........   ..+.+.+..|++|+++|+|||++++||+|++++|+||+.
T Consensus       156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~---~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~  232 (242)
T 4b79_A          156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE---ATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAV  232 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHH---HHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCce
Confidence            99999999999999999999999999999877655433   566777889999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      |.||||+..
T Consensus       233 l~VDGG~la  241 (242)
T 4b79_A          233 LAVDGGYLC  241 (242)
T ss_dssp             EEESTTGGG
T ss_pred             EEECccHhh
Confidence            999999863

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8.7e-53  Score=384.48  Aligned_cols=232  Identities=24%  Similarity=0.359  Sum_probs=211.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      |+|+||||||++|||+++|++|+++|++|++++|++++++++.+    .+.++.++++|++|+++++++++++.++| |+
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~   75 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKL-QR   75 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            45799999999999999999999999999999999877665443    35688999999999999999999999999 99


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++|++.|+|+++ +|+|||+||.++..+.++..+|++||+|+.
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~  154 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIV  154 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHH
Confidence            9999999999988999999999999999999999999999999999876 499999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +|+|++|.|+++ |||||+|+||+++|++....         .+......|++|+++|+|||++++||+|  ++|+|||.
T Consensus       155 ~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~---------~~~~~~~~Pl~R~g~pediA~~v~fL~s--~~~iTG~~  222 (247)
T 3ged_A          155 ALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF---------TQEDCAAIPAGKVGTPKDISNMVLFLCQ--QDFITGET  222 (247)
T ss_dssp             HHHHHHHHHHTT-TSEEEEEEECSBCCCC---C---------CHHHHHTSTTSSCBCHHHHHHHHHHHHH--CSSCCSCE
T ss_pred             HHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH---------HHHHHhcCCCCCCcCHHHHHHHHHHHHh--CCCCCCCe
Confidence            999999999998 99999999999999986543         2233467899999999999999999997  46999999


Q ss_pred             EEeCCCcccc
Q 035642          249 ICVDGGMTVN  258 (367)
Q Consensus       249 i~vdgG~~~~  258 (367)
                      |.||||++.+
T Consensus       223 i~VDGG~s~r  232 (247)
T 3ged_A          223 IIVDGGMSKR  232 (247)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECcCHHHh
Confidence            9999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.2e-52  Score=385.82  Aligned_cols=244  Identities=25%  Similarity=0.345  Sum_probs=215.3

Q ss_pred             CCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            2 YSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         2 ~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      |.|.+|+++| ++|||||++|||+++|++|+++|++|++++|+.++.          ..+..++++|+++++++++++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            3456678988 999999999999999999999999999999986421          12334788999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-CC
Q 035642           81 VSSIFQGKLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LT  157 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-~~  157 (367)
                      +.++| |++|+||||||+...  .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.+ +.
T Consensus        72 ~~~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~  150 (261)
T 4h15_A           72 TRQRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPEST  150 (261)
T ss_dssp             HHHHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTC
T ss_pred             HHHHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCcc
Confidence            99999 899999999998543  578899999999999999999999999999999998899999999999998876 57


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--------C-hhhhHHHHHHhhcCCCCCCCCHHH
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--------D-PAKNKIVEGLVSRTPICRPGEPDE  228 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--------~-~~~~~~~~~~~~~~p~~~~~~~~d  228 (367)
                      .+|++||+|+.+|+++++.|++++|||||+|+||+++|++......        . ....+.........|++|+++|+|
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  230 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEE  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHH
Confidence            8899999999999999999999999999999999999998754321        1 112234455667899999999999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ||++++||+|++++|+||+.|.||||+.
T Consensus       231 vA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          231 VANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            9999999999999999999999999974

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.9e-51  Score=379.15  Aligned_cols=247  Identities=23%  Similarity=0.228  Sum_probs=223.7

Q ss_pred             CCCCCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|++++ ++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.++++|++|+++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            356777 999999876  99999999999999999999999999998888887654 47889999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT  157 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~  157 (367)
                      .+++ |++|++|||||+...    .++.+.+.++|+..+++|+.+++.+++.+.++++  ++|+|||+||.++..+.++.
T Consensus        81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTT
T ss_pred             HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccc
Confidence            9999 999999999998643    3456789999999999999999999999998764  36999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .+|++||+|+.+|+|++|.|++++|||||+|+||+++|++.......   ++..+.+....|++|+++|+|||++++||+
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~---~~~~~~~~~~~Pl~R~g~peevA~~v~fL~  234 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF---NTILKEIKERAPLKRNVDQVEVGKTAAYLL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999988765432   336677788899999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |++++|+||+.|.||||++..
T Consensus       235 Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          235 SDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CchhcCccCCEEEECcCHHhc
Confidence            999999999999999999763

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=5.7e-49  Score=364.17  Aligned_cols=254  Identities=25%  Similarity=0.328  Sum_probs=225.9

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCC-cEEEEEccCCCHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGL-KVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~-~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      |..+++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+. ++.++.+|++|++++++++++
T Consensus         1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45567777 999999999999999999999999999999999999998888876 333 599999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|
T Consensus        81 ~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (265)
T 3lf2_A           81 CERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVAT  159 (265)
T ss_dssp             HHHHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHH
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhh
Confidence            99999 89999999999988888889999999999999999999999999999988888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-----hhhHHHHHHhh--cCCCCCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVS--RTPICRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~--~~p~~~~~~~~dvA~ai  233 (367)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++........     ...........  ..|.+|+++|+|+|+++
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  239 (265)
T 3lf2_A          160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999876543211     11112222222  28999999999999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCcccc
Q 035642          234 AFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +||+|+.++++||+.|.+|||++..
T Consensus       240 ~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          240 LFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHHhCchhcCcCCCEEEECCCCcCC
Confidence            9999999999999999999998763

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=8.1e-49  Score=361.43  Aligned_cols=247  Identities=31%  Similarity=0.479  Sum_probs=229.1

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.+++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4567777 999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      ++ +++|+||||||+....++ +.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        86 ~~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           86 QF-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HH-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            99 899999999999877777 8899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++......    ++....+....|.+|+++|+|+|++++||+|+++++
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~  239 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT----PEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAW  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccC
Confidence            9999999999999999999999999999999998765432    224556677889999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      +||+.|.+|||+..
T Consensus       240 itG~~i~vdgG~~~  253 (256)
T 3gaf_A          240 ISGQVLTVSGGGVQ  253 (256)
T ss_dssp             CCSCEEEESTTSCC
T ss_pred             ccCCEEEECCCccc
Confidence            99999999999865

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.1e-48  Score=360.92  Aligned_cols=247  Identities=26%  Similarity=0.344  Sum_probs=228.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+++|||||++|||++++++|+++|++|+++ +|+.+++++..+++...+.++.++.+|++|+++++++++++.+++ ++
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   82 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-GR   82 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            3499999999999999999999999999986 899999999999888778899999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+|++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +|+++++.|++++||+||+|+||+++|++.......   .+....+....|.+|+++|+|+|++++||+|+.++++||+.
T Consensus       163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~  239 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR---EDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQT  239 (258)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH---HHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCE
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCE
Confidence            999999999999999999999999999998765332   22455666779999999999999999999999999999999


Q ss_pred             EEeCCCccccCC
Q 035642          249 ICVDGGMTVNGF  260 (367)
Q Consensus       249 i~vdgG~~~~~~  260 (367)
                      |.+|||+.....
T Consensus       240 i~vdGG~~~~~~  251 (258)
T 3oid_A          240 IIVDGGRSLLVL  251 (258)
T ss_dssp             EEESTTGGGBCC
T ss_pred             EEECCCccCCCC
Confidence            999999987643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3.8e-49  Score=366.78  Aligned_cols=248  Identities=28%  Similarity=0.413  Sum_probs=230.7

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467777 9999999999999999999999999999999999999999999887889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus       101 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          101 G-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             C-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence            9 899999999999888888899999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++.......+   +..+.+....|.+|+++|+|+|++++||+|+.++++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i  256 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP---EFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYV  256 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH---HHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999876543222   245566677899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.+|||+..
T Consensus       257 tG~~i~vdGG~~~  269 (271)
T 4ibo_A          257 NGQIIYVDGGMLS  269 (271)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCcEEEECCCeec
Confidence            9999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-48  Score=361.67  Aligned_cols=248  Identities=29%  Similarity=0.403  Sum_probs=228.6

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +++++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456666 99999999999999999999999999999999999999988887765 689999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~  161 (367)
                      +++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++. .+.++..+|+
T Consensus        84 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           84 EEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            999 89999999999988888899999999999999999999999999999998888999999999986 7888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....     .+....+....|.+|+++|+|+|++++||+|+++
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  237 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG-----EEYIASMARSIPAGALGTPEDIGHLAAFLATKEA  237 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999865421     2255667778999999999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      +++||+.|.+|||+.+.
T Consensus       238 ~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          238 GYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             TTCCSCEEEESTTTTCC
T ss_pred             cCCcCCEEEECCCeecC
Confidence            99999999999998875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-48  Score=361.82  Aligned_cols=248  Identities=30%  Similarity=0.409  Sum_probs=228.0

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            356666 999999999999999999999999999999999999988888866 477899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      ++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++..+|++
T Consensus        95 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (266)
T 4egf_A           95 AF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT  173 (266)
T ss_dssp             HH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence            99 8999999999998888888999999999999999999999999999998765 689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+++++.|++++||+||+|+||++.|++.........   ....+....|.+|+++|+|+|++++||+|++++
T Consensus       174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~  250 (266)
T 4egf_A          174 SKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEA---KSAPMIARIPLGRFAVPHEVSDAVVWLASDAAS  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHH---HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999998765543322   445566788999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+.|.+|||+.+
T Consensus       251 ~itG~~i~vdGG~~~  265 (266)
T 4egf_A          251 MINGVDIPVDGGYTM  265 (266)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CccCcEEEECCCccC
Confidence            999999999999865

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-48  Score=364.33  Aligned_cols=252  Identities=28%  Similarity=0.386  Sum_probs=221.8

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            455666 9999999999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc--CCCCCccHH
Q 035642           85 FQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT--AAPLTPLYG  161 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~--~~~~~~~Y~  161 (367)
                      + |++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..  +.++..+|+
T Consensus       103 ~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~  181 (283)
T 3v8b_A          103 F-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT  181 (283)
T ss_dssp             H-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred             h-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH
Confidence            9 899999999998654 678889999999999999999999999999999988889999999999987  778899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhH--HHHHHhhcCCC--CCCCCHHHHHHHHHHHh
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNK--IVEGLVSRTPI--CRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~p~--~~~~~~~dvA~ai~~L~  237 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++............  .........|.  +|+++|+|+|++++||+
T Consensus       182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~  261 (283)
T 3v8b_A          182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999998765432221000  01122344566  89999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 035642          238 FPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |++++++||+.|.+|||+.+.
T Consensus       262 s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          262 SERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             SGGGTTCCSCEEEESTTHHHH
T ss_pred             CccccCCcCCEEEECcCcccc
Confidence            999999999999999998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.5e-48  Score=356.54  Aligned_cols=242  Identities=29%  Similarity=0.434  Sum_probs=222.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .+..++.+|++|+++++++++++.+++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            55666 99999999999999999999999999999999999888877774   357789999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        82 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (248)
T 3op4_A           82 -GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKA  160 (248)
T ss_dssp             -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence             8999999999998888888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||+++|++.....     .+.........|.+|+++|+|+|++++||+|++++++|
T Consensus       161 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~it  235 (248)
T 3op4_A          161 GVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN-----DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYIT  235 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence            9999999999999999999999999999999876542     12344556778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+.+
T Consensus       236 G~~i~vdgG~~~  247 (248)
T 3op4_A          236 GETLHVNGGMYM  247 (248)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCeec
Confidence            999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.8e-48  Score=359.41  Aligned_cols=252  Identities=27%  Similarity=0.427  Sum_probs=226.5

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..|++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4466777 9999999999999999999999999999999998888877765   56899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      .+ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        98 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 4dqx_A           98 KW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVAS  176 (277)
T ss_dssp             HH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHH
Confidence            99 89999999999988888889999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc-cCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++.... ............+....|.+|+++|+|+|++++||+|+.++
T Consensus       177 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~  256 (277)
T 4dqx_A          177 KGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSR  256 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccC
Confidence            99999999999999999999999999999999984332 21222222334466778999999999999999999999999


Q ss_pred             CccccEEEeCCCccccCC
Q 035642          243 YITGQVICVDGGMTVNGF  260 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~~~  260 (367)
                      ++||+.|.+|||+.....
T Consensus       257 ~itG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          257 FATGSILTVDGGSSIGNH  274 (277)
T ss_dssp             TCCSCEEEESSSSSSCCT
T ss_pred             CCcCCEEEECCchhhhhc
Confidence            999999999999987643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=9e-48  Score=359.16  Aligned_cols=251  Identities=26%  Similarity=0.289  Sum_probs=227.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44566 99999999999999999999999999999999999999999987778889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPY  163 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~as  163 (367)
                       +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++. .+.++..+|++|
T Consensus        84 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  162 (280)
T 3tox_A           84 -GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS  162 (280)
T ss_dssp             -SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence             89999999999874 467888999999999999999999999999999999888999999999998 678889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++....... ...+....+....|.+|+++|+|+|++++||+|+.+++
T Consensus       163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~  241 (280)
T 3tox_A          163 KAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG-AAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT-CCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc-cCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999987652211 11224455667789999999999999999999999999


Q ss_pred             ccccEEEeCCCccccC
Q 035642          244 ITGQVICVDGGMTVNG  259 (367)
Q Consensus       244 itG~~i~vdgG~~~~~  259 (367)
                      +||+.|.+|||+.+..
T Consensus       242 itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          242 VTGAALLADGGASVTK  257 (280)
T ss_dssp             CCSCEEEESTTGGGCC
T ss_pred             CcCcEEEECCCccccc
Confidence            9999999999998763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.1e-47  Score=358.47  Aligned_cols=249  Identities=29%  Similarity=0.396  Sum_probs=227.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~---~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .+++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.   ++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            455666 999999999999999999999999999999999999999888876654   7999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCC-CCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           82 SSIFQGKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~-~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      .+++ |++|+||||||+ ....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++..+|
T Consensus        86 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  164 (281)
T 3svt_A           86 TAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY  164 (281)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence            9999 899999999998 45567888999999999999999999999999999998888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.........   ....+....|.+|+++|+|+|++++||+|+.
T Consensus       165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  241 (281)
T 3svt_A          165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAE---LSSDYAMCTPLPRQGEVEDVANMAMFLLSDA  241 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH---HHHHHHHHCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999865433322   4556667789999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      ++++||+.+.+|||+...
T Consensus       242 ~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          242 ASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             GTTCCSCEEEESTTGGGS
T ss_pred             cCCCCCCEEEeCCChhcc
Confidence            999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=9.4e-48  Score=356.94  Aligned_cols=245  Identities=31%  Similarity=0.427  Sum_probs=223.9

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      |+.+++++ ++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            55567777 9999999999999999999999999999988 677788888888877889999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      .+++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|+
T Consensus       101 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          101 IERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence            9999 899999999999888888899999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC-C
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP-A  240 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~-~  240 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++....        ..+.+....|.+|+++|+|+|++++||+++ .
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~  251 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL--------AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPA  251 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH--------HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc--------cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999986542        124456778999999999999999999997 7


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +.++||+.|.+|||+.+
T Consensus       252 ~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          252 AAYITGQVINIDGGLVM  268 (269)
T ss_dssp             GGGCCSCEEEESTTSCC
T ss_pred             cCCCcCCEEEECCCeec
Confidence            88999999999999865

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=9.7e-48  Score=352.00  Aligned_cols=242  Identities=29%  Similarity=0.460  Sum_probs=223.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+++|||||++|||+++|++|+++|++|++++| +.+++++..+++...+.++.++.+|++|+++++++++++.+++ ++
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~   82 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GS   82 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            459999999999999999999999999998877 5677888888888778889999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+|++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++++++.|++++||+||+|+||++.|++.....     +...+.+....|.+|+++|+|+|++++||+|++++++||+.
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~  237 (246)
T 3osu_A          163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALS-----DELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT  237 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHhcccCeEEEEEEECCCcCCcccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            9999999999999999999999999999876432     22455667788999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      +.+|||+.+
T Consensus       238 i~vdgG~~~  246 (246)
T 3osu_A          238 IHVNGGMYM  246 (246)
T ss_dssp             EEESTTSCC
T ss_pred             EEeCCCccC
Confidence            999999763

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=4.4e-48  Score=359.36  Aligned_cols=244  Identities=30%  Similarity=0.476  Sum_probs=226.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            4556 99999999999999999999999999999999999999988888778888999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++..+|++||+|
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG  183 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHH
Confidence            89999999999988888888999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++|+++++.|++++||+||+|+||+++|++.....     .+....+....|.+|+++|+|+|++++||+|++++++||
T Consensus       184 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG  258 (270)
T 3ftp_A          184 VAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP-----QEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITG  258 (270)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC-----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccC
Confidence            999999999999999999999999999999876532     123455667789999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.|.+|||+.+
T Consensus       259 ~~i~vdGG~~~  269 (270)
T 3ftp_A          259 TTLHVNGGMFM  269 (270)
T ss_dssp             CEEEESTTSSC
T ss_pred             cEEEECCCccc
Confidence            99999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-47  Score=353.94  Aligned_cols=249  Identities=24%  Similarity=0.356  Sum_probs=223.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+++ |
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   82 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-G   82 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            455 99999999999999999999999999999999999999998887777889999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHH-HcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL-KASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m-~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+| ++++.|+||++||..+..+.++...|++||+|
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG  162 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHH
Confidence            99999999999888888899999999999999999999999999999 45557999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC-CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQA-KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~-~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++|+++++.|++ ++||+||+|+||+++|++........  .+..+.+....|.+|+++|+|+|++++||+|+.++++|
T Consensus       163 ~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          163 VLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS--EEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            9999999999997 67999999999999999764321110  11233455678999999999999999999999999999


Q ss_pred             ccEEEeCCCccccCC
Q 035642          246 GQVICVDGGMTVNGF  260 (367)
Q Consensus       246 G~~i~vdgG~~~~~~  260 (367)
                      |+.+.+|||+.+..+
T Consensus       241 G~~i~vdGG~~~~~~  255 (257)
T 3imf_A          241 GTCMTMDGGQHLHQY  255 (257)
T ss_dssp             SCEEEESTTTTSCCC
T ss_pred             CCEEEECCCcccCCC
Confidence            999999999987654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1e-47  Score=357.96  Aligned_cols=247  Identities=28%  Similarity=0.421  Sum_probs=225.6

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +..+++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.
T Consensus        25 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           25 LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34567777 99999999999999999999999999999999999999999998878889999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCC--CCCcc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAA--PLTPL  159 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~--~~~~~  159 (367)
                      +++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ +|+||++||.++..+.  ++...
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          105 GEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HHH-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            999 8999999999998888888999999999999999999999999999998765 4899999999987654  36788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++......      ....+....|.+|+++|+|+|++++||+|+
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  257 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD------YHALWEPKIPLGRMGRPEELTGLYLYLASA  257 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG------GHHHHGGGSTTSSCBCGGGSHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH------HHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999998765421      334556778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      .++++||+.|.+|||++.
T Consensus       258 ~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          258 ASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCccCcEEEECcCccC
Confidence            999999999999999865

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-47  Score=360.71  Aligned_cols=247  Identities=29%  Similarity=0.390  Sum_probs=228.2

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            355666 99999999999999999999999999999999999999988887665 6899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~a  162 (367)
                      ++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++. .+.++..+|++
T Consensus       116 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  194 (293)
T 3rih_A          116 AF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGA  194 (293)
T ss_dssp             HH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHH
Confidence            99 89999999999988888889999999999999999999999999999988888999999999986 78889999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....     .+....+....|.+|+++|+|+|++++||+|++++
T Consensus       195 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~  269 (293)
T 3rih_A          195 SKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG-----EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAG  269 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999875432     22556667789999999999999999999999999


Q ss_pred             CccccEEEeCCCcccc
Q 035642          243 YITGQVICVDGGMTVN  258 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~  258 (367)
                      ++||+.|.+|||+.+.
T Consensus       270 ~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          270 YITGQAIVVDGGQVLP  285 (293)
T ss_dssp             TCCSCEEEESTTTTCB
T ss_pred             CCCCCEEEECCCccCC
Confidence            9999999999998874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.1e-47  Score=356.13  Aligned_cols=248  Identities=25%  Similarity=0.332  Sum_probs=218.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC----------------hhHHHHHHHHHHhcCCcEEEEEccCCC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN----------------QTELNERLQEWKLKGLKVTGSVCDLSS   70 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~----------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd   70 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+                .+++++..+++...+.++.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            4556 99999999999999999999999999999887                677888888887778899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCC-ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCc
Q 035642           71 REQREKLMETVSSIFQGKLNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSV  148 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~-~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~  148 (367)
                      +++++++++++.+++ |++|+||||||+..... +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.
T Consensus        88 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           88 YDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            999999999999999 89999999999876654 78889999999999999999999999999998765 6899999999


Q ss_pred             ccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc------C---Chhhh--HHHHHHhhc
Q 035642          149 AGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR------H---DPAKN--KIVEGLVSR  217 (367)
Q Consensus       149 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~------~---~~~~~--~~~~~~~~~  217 (367)
                      ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....      .   .....  .........
T Consensus       167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T 3uve_A          167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT  246 (286)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCS
T ss_pred             hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999875311      0   01100  111123445


Q ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          218 TPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       218 ~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .| +|+++|+|+|++++||+|++++++||+.|.||||+.+
T Consensus       247 ~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          247 LP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            67 8999999999999999999999999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1e-47  Score=358.54  Aligned_cols=247  Identities=28%  Similarity=0.447  Sum_probs=226.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+++ |++
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  102 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-GPI  102 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            3499999999999999999999999999999999999999999998878899999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHH--HHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP--LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~--~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|  .|++++.|+||++||.++..+.++..+|++||+|+
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~  182 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV  182 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHH
Confidence            9999999998888888999999999999999999999999999  57777789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++|+++++.|++++||+||+|+||+++|++.......      ....+..+.+....|.+|+++|+|+|++++||+|+++
T Consensus       183 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a  262 (279)
T 3sju_A          183 VGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAA  262 (279)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred             HHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999987643210      0123355667778999999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      +++||+.|.+|||++.
T Consensus       263 ~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          263 ASITAQALNVCGGLGN  278 (279)
T ss_dssp             GGCCSCEEEESTTCCC
T ss_pred             cCcCCcEEEECCCccC
Confidence            9999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-47  Score=353.98  Aligned_cols=247  Identities=22%  Similarity=0.248  Sum_probs=225.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++ +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-G   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-S
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            455 99999999999999999999999999999999999999999998888899999999999999999999999999 8


Q ss_pred             CccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||.. ...++.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++..+|++||+|
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence            999999999985 456788899999999999999999999999999998765 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++|+++++.|++++||+||+|+||+++|++.......      ....+..+.+....|.+|+++|+|+|++++||+|+.
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~  246 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL  246 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999987643211      011234566677899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      ++++||+.|.+|||.++
T Consensus       247 ~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          247 ASGITGQALDVNCGEYK  263 (264)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             ccCCCCCEEEECCCccC
Confidence            99999999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=9.6e-48  Score=356.36  Aligned_cols=243  Identities=26%  Similarity=0.385  Sum_probs=211.9

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.+.
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            456666 9999999999999999999999999999999998888776665   668999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        99 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A           99 M-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             H-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence            9 899999999999887888888999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++.....     .+..+.+....|.+|+++|+|+|++++||+|++++++
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~i  252 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN-----EKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL  252 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC-----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999876542     1245566778999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.+|||+.+
T Consensus       253 tG~~i~vdGG~~~  265 (266)
T 3grp_A          253 TGQTLHINGGMAM  265 (266)
T ss_dssp             CSCEEEESTTC--
T ss_pred             cCCEEEECCCeee
Confidence            9999999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-47  Score=352.31  Aligned_cols=251  Identities=25%  Similarity=0.309  Sum_probs=219.9

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEccCCCHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------------QTELNERLQEWKLKGLKVTGSVCDLSSRE   72 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~   72 (367)
                      +.++++ ++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...+.++.++.+|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            345666 99999999999999999999999999999997            56677777777777889999999999999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT  152 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~  152 (367)
                      +++++++++.+.+ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..
T Consensus        85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            9999999999999 899999999999888888899999999999999999999999999999888889999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc------C---ChhhhHHHH--HHhhcCCCC
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR------H---DPAKNKIVE--GLVSRTPIC  221 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~------~---~~~~~~~~~--~~~~~~p~~  221 (367)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.....      .   .........  ......| +
T Consensus       164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (281)
T 3s55_A          164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-A  242 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-C
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-c
Confidence            99999999999999999999999999999999999999999999875310      0   011101111  1222344 8


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++++|+|+|++++||+|+.++++||+.|.+|||+...
T Consensus       243 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            9999999999999999999999999999999998764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-47  Score=356.46  Aligned_cols=245  Identities=26%  Similarity=0.378  Sum_probs=200.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.+ ++|||||++|||+++|++|+++|++|++++| +.+++++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4555 9999999999999999999999999999985 7788888888888778899999999999999999999999999


Q ss_pred             CCCccEEEEcCCC--CCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCCCccH
Q 035642           86 QGKLNLLVNNAAV--AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~--~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                       +++|+||||||+  ....++.+.+.++|++++++|+.|+++++++++|+|++++   .|+||++||.++..+.++..+|
T Consensus       106 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  184 (280)
T 4da9_A          106 -GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY  184 (280)
T ss_dssp             -SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHH
T ss_pred             -CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHH
Confidence             899999999998  4456788899999999999999999999999999998755   6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh-cCCCCCCCCHHHHHHHHHHHhCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS-RTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......     ....... ..|.+|+++|+|+|++++||+|+
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  259 (280)
T 4da9_A          185 CMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-----YDGLIESGLVPMRRWGEPEDIGNIVAGLAGG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-----HHHHHhhcCCCcCCcCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999987654322     1222223 57899999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                      +++++||+.|.+|||+.+.
T Consensus       260 ~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          260 QFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             TTGGGTTCEEEESTTCC--
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            9999999999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-47  Score=356.09  Aligned_cols=249  Identities=26%  Similarity=0.366  Sum_probs=218.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHHHHHhcCCcEEEEEccCCCHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-------------NQTELNERLQEWKLKGLKVTGSVCDLSSREQ   73 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-------------~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s   73 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...+.++.++.+|++|+++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4566 9999999999999999999999999999998             6777888888887778899999999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCccccc
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVT  152 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~  152 (367)
                      ++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..
T Consensus        88 v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           88 LRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            999999999999 8999999999998888888999999999999999999999999999998765 68999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHHHHHHhhcCCCCCCCCH
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEP  226 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~  226 (367)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++........      ..+.....+....|. |+++|
T Consensus       167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~p  245 (277)
T 3tsc_A          167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEP  245 (277)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCH
Confidence            99999999999999999999999999999999999999999999865311000      000011112233454 79999


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +|+|++++||+|++++++||+.|.+|||++.+
T Consensus       246 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          246 EDIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            99999999999999999999999999998753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.8e-47  Score=351.06  Aligned_cols=244  Identities=27%  Similarity=0.381  Sum_probs=220.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL-   80 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4556 9999999999999999999999999999999999888887776   4578999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|++||+|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa  158 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA  158 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence            89999999999988888899999999999999999999999999999865  4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++|+++++.|++++||+||+|+||+++|++........ .............|.+|+++|+|+|++++||+|+ ++++|
T Consensus       159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~it  237 (255)
T 4eso_A          159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTT  237 (255)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCC
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCcc
Confidence            999999999999999999999999999999875432222 1223344456678999999999999999999998 89999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.|.+|||+...
T Consensus       238 G~~i~vdGG~~~~  250 (255)
T 4eso_A          238 GAKLAVDGGLGQK  250 (255)
T ss_dssp             SCEEEESTTTTTT
T ss_pred             CCEEEECCCcccc
Confidence            9999999998765

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-46  Score=353.83  Aligned_cols=248  Identities=25%  Similarity=0.341  Sum_probs=218.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------------QTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...+.++.++.+|++|++++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4566 99999999999999999999999999999987            6778888888887788999999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCC-ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCccccc
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVT  152 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~-~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~  152 (367)
                      +++++++.+.+ |++|+||||||+..... +.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..
T Consensus       105 ~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          105 QAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            99999999999 89999999999877654 78889999999999999999999999999987764 79999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc------C---Chhhh--HHHHHHhhcCCCC
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR------H---DPAKN--KIVEGLVSRTPIC  221 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~------~---~~~~~--~~~~~~~~~~p~~  221 (367)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.....      .   .....  ..........| +
T Consensus       184 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  262 (299)
T 3t7c_A          184 GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-I  262 (299)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-C
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-c
Confidence            99999999999999999999999999999999999999999999875311      0   01101  11122344566 8


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++|+|+|++++||+|++++++||+.|.||||+.+
T Consensus       263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            899999999999999999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.6e-47  Score=355.37  Aligned_cols=248  Identities=26%  Similarity=0.345  Sum_probs=224.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++|+++++++++++.+++
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3556 999999999999999999999999999999999988888887754 36789999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++||+
T Consensus       104 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (277)
T 4fc7_A          104 -GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKA  182 (277)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence             8999999999998888888999999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||++.|++........  ...........|++|+++|+|+|++++||+|+.++++|
T Consensus       183 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~it  260 (277)
T 4fc7_A          183 AVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP--QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVT  260 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC--HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC--HHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcC
Confidence            9999999999999999999999999999998643222111  12455666788999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.|.+|||+.+.
T Consensus       261 G~~i~vdGG~~~~  273 (277)
T 4fc7_A          261 GAVLVADGGAWLT  273 (277)
T ss_dssp             SCEEEESTTHHHH
T ss_pred             CCEEEECCCcccC
Confidence            9999999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.3e-47  Score=349.95  Aligned_cols=242  Identities=25%  Similarity=0.367  Sum_probs=219.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT-   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-
Confidence            3455 9999999999999999999999999999999999888887776   6689999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++..+|++||+
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  158 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKG  158 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHH
Confidence            8999999999998888888999999999999999999999999999998765 699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||+++|++........    .........|++|+++|+|+|++++||+|++++++|
T Consensus       159 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~it  234 (247)
T 3rwb_A          159 GVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE----AFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT  234 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG----GHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH----HHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999876542221    111222337899999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.|.+|||+..
T Consensus       235 G~~i~vdGG~~~  246 (247)
T 3rwb_A          235 GQTLNVDAGMVR  246 (247)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CCEEEECCCccC
Confidence            999999999864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.9e-47  Score=349.96  Aligned_cols=246  Identities=25%  Similarity=0.338  Sum_probs=221.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++ 
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   80 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA-   80 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS-
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            4555 9999999999999999999999999999999999888887776   4578899999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..+.++..+|++||+
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKA  160 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHH
Confidence            8999999999998888888999999999999999999999999999997765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |+++|+++++.|++++||+||+|+||+++|++......      .....+....+....|.+|+++|+|+|++++||+|+
T Consensus       161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~  240 (259)
T 4e6p_A          161 AVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA  240 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999998754310      000112344556778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      +++++||+.|.+|||+.+
T Consensus       241 ~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          241 ESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             ccCCCCCCEEEECcChhc
Confidence            999999999999999864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.3e-47  Score=353.56  Aligned_cols=250  Identities=30%  Similarity=0.361  Sum_probs=215.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++.+ ++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45555 9999999999999999999999999999999 667777877777654 66899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      ++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++|
T Consensus       101 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  179 (281)
T 3v2h_A          101 RF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAA  179 (281)
T ss_dssp             HT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHH
Confidence            99 89999999999988888889999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh------hH-HHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK------NK-IVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~------~~-~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++..........      .+ ..+.+....|.+|+++|+|+|++++||
T Consensus       180 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L  259 (281)
T 3v2h_A          180 KHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYL  259 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999987654322110      01 112345678999999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCccc
Q 035642          237 CFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +|++++++||+.|.+|||++.
T Consensus       260 ~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          260 AGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HSSGGGGCCSCEEEESTTGGG
T ss_pred             cCCCcCCCCCcEEEECCCccC
Confidence            999999999999999999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-47  Score=357.21  Aligned_cols=250  Identities=25%  Similarity=0.313  Sum_probs=218.8

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |..+++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHH
Confidence            44456777 9999999999999999999999999999999999888887776   5678899999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++
T Consensus        99 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  177 (277)
T 3gvc_A           99 AAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGM  177 (277)
T ss_dssp             HHH-SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHH
Confidence            999 8999999999998888888999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh---cCCCCCCCCHHHHHHHHHHHhCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS---RTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......... ........   ..|.+|+++|+|+|++++||+|+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~  256 (277)
T 3gvc_A          178 SKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG-ALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSD  256 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC-------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh-hHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999987543221000 01111111   45678999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                      +++++||+.|.+|||+...
T Consensus       257 ~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          257 DASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             GGTTCCSCEEEESTTGGGS
T ss_pred             ccCCccCcEEEECCcchhc
Confidence            9999999999999998764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-47  Score=352.36  Aligned_cols=245  Identities=28%  Similarity=0.373  Sum_probs=221.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+ +.+++..+++...+.++.++.+|++|+++++++.+. .+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhc
Confidence            56677 99999999999999999999999999999976 556677777777788899999999999999999554 4556


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus       105 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa  183 (273)
T 3uf0_A          105 -RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKH  183 (273)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred             -CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence             8999999999998888888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||++.|++.........   ....+....|.+|+++|+|+|++++||+|++++++|
T Consensus       184 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~it  260 (273)
T 3uf0_A          184 AVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE---RAAEITARIPAGRWATPEDMVGPAVFLASDAASYVH  260 (273)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH---HHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999998765543322   455666778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.|.+|||+..
T Consensus       261 G~~i~vdGG~~~  272 (273)
T 3uf0_A          261 GQVLAVDGGWLA  272 (273)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECcCccC
Confidence            999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5e-47  Score=353.77  Aligned_cols=250  Identities=28%  Similarity=0.327  Sum_probs=219.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHHHHHhcCCcEEEEEccCCCHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-------------NQTELNERLQEWKLKGLKVTGSVCDLSSRE   72 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-------------~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~   72 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...+.++.++.+|++|++
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            45666 9999999999999999999999999999998             678888888888877889999999999999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccc
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGV  151 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~  151 (367)
                      +++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        91 ~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           91 ALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            9999999999999 8999999999998888888999999999999999999999999999998765 7999999999999


Q ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh---hhHHHHH--HhhcCCCCCCCCH
Q 035642          152 TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA---KNKIVEG--LVSRTPICRPGEP  226 (367)
Q Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~---~~~~~~~--~~~~~p~~~~~~~  226 (367)
                      .+.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.........   .......  .....|. |+++|
T Consensus       170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p  248 (280)
T 3pgx_A          170 KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTA  248 (280)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCH
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCH
Confidence            9999999999999999999999999999999999999999999998753110000   0000000  1122344 78999


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +|+|++++||+|++++++||+.|.+|||+..+
T Consensus       249 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  280 (280)
T 3pgx_A          249 DEVADVVAWLAGDGSGTLTGTQIPVDKGALKY  280 (280)
T ss_dssp             HHHHHHHHHHHSGGGTTCSSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccCC
Confidence            99999999999999999999999999998753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.8e-47  Score=351.29  Aligned_cols=242  Identities=25%  Similarity=0.371  Sum_probs=212.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      |.+++ ++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44455 99999999999999999999999999987 56777788888888877889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..+|++||
T Consensus       103 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  179 (267)
T 3u5t_A          103 F-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAK  179 (267)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHH
Confidence            9 89999999999988888889999999999999999999999999999965  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++.......    +..+.+....|.+|+++|+|+|++++||+|+.+.++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  255 (267)
T 3u5t_A          180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD----EVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWV  255 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999999999999999987543221    134455677899999999999999999999999999


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      ||+.|.+|||+
T Consensus       256 tG~~i~vdGG~  266 (267)
T 3u5t_A          256 NGQVLRANGGI  266 (267)
T ss_dssp             CSEEEEESSSC
T ss_pred             cCCEEEeCCCc
Confidence            99999999996

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3e-46  Score=347.38  Aligned_cols=253  Identities=56%  Similarity=0.924  Sum_probs=220.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            55666 99999999999999999999999999999999998888888887767789999999999999999999999887


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  176 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  176 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHH
Confidence            46899999999998777888899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++++++++.|++++||+||+|+||+++|++....... ....+..+.+....|.+|+++|+|+|++++||+++.++++
T Consensus       177 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~  256 (273)
T 1ae1_A          177 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI  256 (273)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999987543221 0011234445566899999999999999999999989999


Q ss_pred             cccEEEeCCCccccC
Q 035642          245 TGQVICVDGGMTVNG  259 (367)
Q Consensus       245 tG~~i~vdgG~~~~~  259 (367)
                      +|+.+.+|||+...+
T Consensus       257 tG~~i~vdGG~~~~~  271 (273)
T 1ae1_A          257 TGQIIWADGGFTANG  271 (273)
T ss_dssp             CSCEEEESTTGGGCS
T ss_pred             CCCEEEECCCcccCC
Confidence            999999999987643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=343.60  Aligned_cols=244  Identities=29%  Similarity=0.419  Sum_probs=226.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN-   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4555 99999999999999999999999999999999999999999888878899999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++||+|
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG  160 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence            89999999999988888888999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.|++++||+||+|+||++.|++......     +....+....|.+++.+|+|+|++++||+++++++++|
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG  235 (247)
T 3lyl_A          161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD-----EQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITG  235 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH-----HHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH-----HHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccC
Confidence            9999999999999999999999999999998765421     23445567789999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||+.+
T Consensus       236 ~~i~vdgG~~~  246 (247)
T 3lyl_A          236 QTLHVNGGMYM  246 (247)
T ss_dssp             CEEEESTTSSC
T ss_pred             CEEEECCCEec
Confidence            99999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3e-46  Score=347.12  Aligned_cols=241  Identities=29%  Similarity=0.386  Sum_probs=219.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45666 9999999999999999999999999999999999888887776   5678899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           86 QGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                       |++|+||||||+..  ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        84 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (271)
T 3tzq_B           84 -GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACT  162 (271)
T ss_dssp             -SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence             89999999999873  346678899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++.....    .......+....|.+|+++|+|+|++++||+|+++++
T Consensus       163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~  238 (271)
T 3tzq_B          163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL----PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAF  238 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            999999999999999999999999999999999876322    1224556677889999999999999999999999999


Q ss_pred             ccccEEEeCCCc
Q 035642          244 ITGQVICVDGGM  255 (367)
Q Consensus       244 itG~~i~vdgG~  255 (367)
                      +||+.|.+|||+
T Consensus       239 itG~~i~vdGG~  250 (271)
T 3tzq_B          239 ITGQVIAADSGL  250 (271)
T ss_dssp             CCSCEEEESTTT
T ss_pred             cCCCEEEECCCc
Confidence            999999999993

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.6e-46  Score=348.70  Aligned_cols=248  Identities=24%  Similarity=0.352  Sum_probs=220.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..++++ ++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345666 9999999999999999999999999999765 56677888888887788999999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc-cccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA-GVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~-~~~~~~~~~~Y~a  162 (367)
                      ++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.+ +..+.++...|++
T Consensus        93 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a  169 (270)
T 3is3_A           93 HF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSG  169 (270)
T ss_dssp             HH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHH
Confidence            99 89999999999988888889999999999999999999999999999965  68999999988 5678888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......       ..........+....|.+|+++|+|+|++++|
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  249 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998763211       01112344455667899999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcc
Q 035642          236 LCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~  256 (367)
                      |+|++++++||+.|.+|||+.
T Consensus       250 L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          250 LVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HTSGGGTTCCSCEEEESTTCC
T ss_pred             HcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999963

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.5e-47  Score=356.72  Aligned_cols=245  Identities=25%  Similarity=0.331  Sum_probs=221.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            56777 9999999999999999999999999999999999999998888887889999999999999999999998776 


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+...+|++||+
T Consensus       108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  186 (275)
T 4imr_A          108 -APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA  186 (275)
T ss_dssp             -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence             7899999999998888888999999999999999999999999999998888899999999999998888888999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-CCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-PICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      |+++|+++++.|++++||+||+|+||+++|++.......  ..+....+.... |.+|+++|+|+|++++||+|++++++
T Consensus       187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~i  264 (275)
T 4imr_A          187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ--DPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFM  264 (275)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH--CHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc--ChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCC
Confidence            999999999999999999999999999999987543211  112333333444 89999999999999999999999999


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      ||+.|.+|||+
T Consensus       265 tG~~i~vdGG~  275 (275)
T 4imr_A          265 TGETIFLTGGY  275 (275)
T ss_dssp             CSCEEEESSCC
T ss_pred             CCCEEEeCCCC
Confidence            99999999995

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.3e-46  Score=348.61  Aligned_cols=248  Identities=24%  Similarity=0.352  Sum_probs=217.6

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +..+.++.+|+++++++++++++  
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   82 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--   82 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH--
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh--
Confidence            456666 9999999999999999999999999999999999999888888765  45688899999999998887754  


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                        + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++
T Consensus        83 --~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  159 (267)
T 3t4x_A           83 --Y-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSA  159 (267)
T ss_dssp             --C-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             --c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHH
Confidence              5 8999999999998888888999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC----C--hhhh----HHHHHHhhcCCCCCCCCHHHHHHH
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH----D--PAKN----KIVEGLVSRTPICRPGEPDEVSSL  232 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~----~--~~~~----~~~~~~~~~~p~~~~~~~~dvA~a  232 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......    .  ....    ..........|++|+++|+|+|++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~  239 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL  239 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHH
Confidence            99999999999999999999999999999999997643211    0  0111    122222334678999999999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCcccc
Q 035642          233 VAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++||+|+.++++||+.|.+|||+...
T Consensus       240 v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          240 VTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHcCccccCccCCeEEECCCcccc
Confidence            99999999999999999999998653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.6e-46  Score=342.93  Aligned_cols=252  Identities=56%  Similarity=0.888  Sum_probs=224.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45666 99999999999999999999999999999999998888888887767789999999999999999999999887


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKG  164 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHH
Confidence            45899999999998777788889999999999999999999999999998888899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++++++++.|++++||+||+|+||+++|++...........+....+....|.+++++|+|+|++++||+++.+.+++
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~t  244 (260)
T 2ae2_A          165 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVT  244 (260)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCC
Confidence            99999999999999999999999999999998754332222112222455668999999999999999999998889999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||+...
T Consensus       245 G~~~~vdgG~~~~  257 (260)
T 2ae2_A          245 GQIIYVDGGLMAN  257 (260)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCEEEECCCcccc
Confidence            9999999998653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=9.9e-47  Score=348.07  Aligned_cols=247  Identities=26%  Similarity=0.365  Sum_probs=207.3

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      |.++++++ ++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++...+.++.++.+|++|+++++++++++
T Consensus         1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            34456667 99999999999999999999999999998 66777788888888777788999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCcc
Q 035642           82 SSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPL  159 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~  159 (367)
                      .+++ |++|+||||||.. ...++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++. .+.++..+
T Consensus        81 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           81 ADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHHH-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHH
T ss_pred             HHHh-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHH
Confidence            9999 8999999999987 5677888999999999999999999999999999965  5899999999998 67888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|+++++.|+++. |+||+|+||+++|++.......    +..+.+....|.+|+++|+|+|++++||+|+
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~pedva~~v~~L~s~  232 (259)
T 3edm_A          158 YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP----EVRERVAGATSLKREGSSEDVAGLVAFLASD  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999986 9999999999999987654321    2344555678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                      .++++||+.|.+|||+..+
T Consensus       233 ~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          233 DAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             GGTTCCSCEEEESBCSSBC
T ss_pred             cccCccCCEEEECCCcCCC
Confidence            9999999999999998876

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.4e-46  Score=348.57  Aligned_cols=260  Identities=26%  Similarity=0.338  Sum_probs=220.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.+++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34556 9999999999999999999999999999999998887766554   5689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCC-Cc----cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           86 QGKLNLLVNNAAVAVPK-EA----LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~-~~----~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                       +++|+||||||+.... ++    .+.+.+.|++++++|+.|+++++++++|+|.++ .|+||++||.++..+.++..+|
T Consensus        78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHH
T ss_pred             -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchh
Confidence             8999999999986432 22    244567899999999999999999999999765 4899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ++||+|+++|+++++.|+++. |+||+|+||+++|++........     ......+.+....|.+|+++|+|+|++++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999986 99999999999999875432111     001134556677899999999999999999


Q ss_pred             HhC-CCCCCccccEEEeCCCccccCCCCCCCCCcccch
Q 035642          236 LCF-PAASYITGQVICVDGGMTVNGFNPTCCPNAIDHL  272 (367)
Q Consensus       236 L~s-~~~~~itG~~i~vdgG~~~~~~~~~~~~~~~~~~  272 (367)
                      |+| +.+.++||++|.+|||+++.+..........|+.
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~p~~  272 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGVRGFLTAAGGADLPEK  272 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGGCCSSSSCSCTTHHHH
T ss_pred             hhcccccccccCcEEEECCCCccccchhhcCCCCCCcc
Confidence            999 7889999999999999999877665555555543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-46  Score=345.73  Aligned_cols=243  Identities=28%  Similarity=0.353  Sum_probs=219.1

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ..+++++ ++|||||++|||+++|++|+++|++|++++++ .+.++++.+++...+.++.++.+|++|+++++++++++.
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3456777 99999999999999999999999999998655 567788888888778899999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-CCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-APLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-~~~~~~Y~  161 (367)
                      +++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+ .++..+|+
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~  181 (271)
T 3v2g_A          105 EAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYS  181 (271)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHH
T ss_pred             HHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHH
Confidence            999 89999999999988888899999999999999999999999999999854  689999999877665 68899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++......      ..+......|.+|+++|+|+|++++||+|+++
T Consensus       182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~  255 (271)
T 3v2g_A          182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD------HAEAQRERIATGSYGEPQDIAGLVAWLAGPQG  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS------SHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch------hHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999998764321      23344567899999999999999999999999


Q ss_pred             CCccccEEEeCCCcc
Q 035642          242 SYITGQVICVDGGMT  256 (367)
Q Consensus       242 ~~itG~~i~vdgG~~  256 (367)
                      +++||+.|.+|||+.
T Consensus       256 ~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          256 KFVTGASLTIDGGAN  270 (271)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             CCccCCEEEeCcCcc
Confidence            999999999999975

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.1e-46  Score=346.81  Aligned_cols=249  Identities=29%  Similarity=0.385  Sum_probs=219.5

Q ss_pred             CCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            3 SYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         3 ~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .+..|++++ ++|||||++|||+++|++|+++|++|++++| +.+..+.+.+++...+.++.++.+|++|++++++++++
T Consensus        21 ~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           21 QSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             ---CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            455677777 9999999999999999999999999999999 55566677777777788999999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|
T Consensus       101 ~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (271)
T 4iin_A          101 IVQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNY  179 (271)
T ss_dssp             HHHHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHh
Confidence            99998 89999999999988888888999999999999999999999999999998888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++++++++.|++++||+||+|+||++.|++.......     ....+....|.+++.+|+|+|++++||++++
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~  254 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE-----LKADYVKNIPLNRLGSAKEVAEAVAFLLSDH  254 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH-----HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999987654322     3344566789999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +.+++|+.+.+|||+.+
T Consensus       255 ~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          255 SSYITGETLKVNGGLYM  271 (271)
T ss_dssp             GTTCCSCEEEESTTSCC
T ss_pred             cCCCcCCEEEeCCCeeC
Confidence            99999999999999864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-46  Score=344.13  Aligned_cols=251  Identities=26%  Similarity=0.356  Sum_probs=221.7

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      .+++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345666 9999999999999999999999999999999999888888877654  6689999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      +++ |++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|+
T Consensus        88 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (267)
T 1iy8_A           88 ERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA  166 (267)
T ss_dssp             HHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH
T ss_pred             HHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHH
Confidence            999 899999999998766 677888999999999999999999999999999887789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc--c-CChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI--R-HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +||+++++++++++.|++++||+||+|+||+++|++....  . .........+.+....|.+|+++|+|+|++++||++
T Consensus       167 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  246 (267)
T 1iy8_A          167 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLS  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999986542  1 111111122245566799999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      +.+++++|+.+.+|||+..
T Consensus       247 ~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          247 DDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             ccccCCCCCEEEECCCccc
Confidence            8889999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7e-46  Score=343.93  Aligned_cols=247  Identities=32%  Similarity=0.507  Sum_probs=222.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH-HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l-~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++ ...+.++.++.+|++|+++++++++++.++
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45666 9999999999999999999999999999999998888887777 444678899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc-cccCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA-GVTAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~-~~~~~~~~~~Y~as  163 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.+ +..+.++..+|++|
T Consensus        97 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  175 (267)
T 1vl8_A           97 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  175 (267)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHH
Confidence            9 899999999999877788889999999999999999999999999999888789999999998 88888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+++++|+++++.|++++||+||+|+||+++|++........   +....+....|.+++++|+|+|++++||+++.+++
T Consensus       176 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~  252 (267)
T 1vl8_A          176 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP---EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  252 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH---HHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccCh---HHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999875432111   23344556688999999999999999999998899


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+.+|||+..
T Consensus       253 itG~~i~vdGG~~~  266 (267)
T 1vl8_A          253 VTGQIIFVDGGWTA  266 (267)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCeEEECCCCCC
Confidence            99999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.4e-46  Score=350.34  Aligned_cols=248  Identities=22%  Similarity=0.245  Sum_probs=219.5

Q ss_pred             CCCCCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++++++ ++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+.....+ .+.++.||++|+++++++++++.
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHH
Confidence            345666 999999997  99999999999999999999999766555444443333 46889999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc
Q 035642           83 SIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +++ |++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..
T Consensus       104 ~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          104 EEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred             HHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence            999 899999999998764    67788899999999999999999999999999865  68999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++......   ............|.+|+++|+|+|++++||+|
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  257 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISD---FHYILTWNKYNSPLRRNTTLDDVGGAALYLLS  257 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHH---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccc---hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999998764322   22345566677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccCC
Q 035642          239 PAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      +.++++||+.|.+|||+.+.+.
T Consensus       258 ~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          258 DLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             GGGTTCCSCEEEESTTGGGCSS
T ss_pred             CccCCccCCEEEECCCccccCC
Confidence            9999999999999999998754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=6.4e-46  Score=339.78  Aligned_cols=240  Identities=32%  Similarity=0.466  Sum_probs=219.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|++++| +.+++++..+++...+.++.++.+|++|+++++++++++.+++ +++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   83 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-GQV   83 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            39999999999999999999999999999999 8888888888887667789999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+++++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (246)
T 2uvd_A           84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIG  163 (246)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHH
Confidence            99999999987778888899999999999999999999999999987778999999999999888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.|++++||+||+|+||+++|++.......     ....+....|.+++++|+|+|++++||+++++++++|+.+
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  238 (246)
T 2uvd_A          164 LTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN-----IKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL  238 (246)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT-----HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH-----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence            99999999999999999999999999987643211     2333445678899999999999999999988899999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      .+|||+.
T Consensus       239 ~vdgG~~  245 (246)
T 2uvd_A          239 NVDGGMV  245 (246)
T ss_dssp             EESTTSC
T ss_pred             EECcCcc
Confidence            9999975

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=6.6e-47  Score=349.87  Aligned_cols=247  Identities=21%  Similarity=0.268  Sum_probs=211.3

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN---QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~---~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .++++++ ++|||||++|||+++|++|+++|++|++++|+   .++++++.+++...+.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4467777 99999999999999999999999999998764   4567777888877788999999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+  +.|+||++||.++..+.++..+|
T Consensus        85 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           85 AEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchh
Confidence            99999 8999999999998888888999999999999999999999999999983  35899999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++........    .........|.+|+++|+|+|++++||+|+ 
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-  236 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE----STAFHKSQAMGNQLTKIEDIAPIIKFLTTD-  236 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CCCCSCCGGGTHHHHHHHHTT-
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH----HHHHHHhcCcccCCCCHHHHHHHHHHHcCC-
Confidence            999999999999999999999999999999999999876532221    233445667899999999999999999998 


Q ss_pred             CCCccccEEEeCCCccccC
Q 035642          241 ASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~~  259 (367)
                      ++++||+.|.+|||+..+.
T Consensus       237 ~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          237 GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTCCSCEEEESTTCCCC-
T ss_pred             CCCccCCEEEECCCccCCC
Confidence            8999999999999988763

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-46  Score=344.16  Aligned_cols=241  Identities=24%  Similarity=0.370  Sum_probs=199.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45666 9999999999999999999999999999999998887777665   4578899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCcc----CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCcccccCCC
Q 035642           86 QGKLNLLVNNAAVAVPKEAL----DTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSVAGVTAAP  155 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~----~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~~~~~~~~  155 (367)
                       |++|+||||||+....++.    +.+.++|++++++|+.|+++++++++|+|+++      +.|+||++||.++..+.+
T Consensus        80 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           80 -GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             -SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             -CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence             8999999999987665443    57899999999999999999999999999874      579999999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVA  234 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~  234 (367)
                      +..+|++||+|+++|+++++.|++++||+||+|+||+++|++.......     ..+.+....|. +|+++|+|+|++++
T Consensus       159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~p~~~r~~~~~dva~~v~  233 (257)
T 3tpc_A          159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-----VQDALAASVPFPPRLGRAEEYAALVK  233 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------------CCSSSSCSCBCHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-----HHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987654322     33445567788 89999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ||+++  +++||+.+.+|||+.+.
T Consensus       234 ~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          234 HICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHccc--CCcCCcEEEECCCccCC
Confidence            99964  79999999999998764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-45  Score=350.89  Aligned_cols=249  Identities=27%  Similarity=0.411  Sum_probs=218.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------------QTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...+.++.++.+|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3556 99999999999999999999999999999886            6777777777777788999999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA  153 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~  153 (367)
                      +++++++.+++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..+
T Consensus       123 ~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          123 QAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            99999999999 8999999999998888888999999999999999999999999999998765 699999999999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc---------CChhhhHHHHH--HhhcCCCCC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR---------HDPAKNKIVEG--LVSRTPICR  222 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~---------~~~~~~~~~~~--~~~~~p~~~  222 (367)
                      .++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.....         ...........  .....| ++
T Consensus       202 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~  280 (317)
T 3oec_A          202 APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IP  280 (317)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CC
Confidence            9999999999999999999999999999999999999999999764210         01111111111  223344 78


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++|+|+|++++||+|++++++||+.|.||||+...
T Consensus       281 ~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          281 WVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            899999999999999999999999999999998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.3e-45  Score=346.78  Aligned_cols=247  Identities=20%  Similarity=0.235  Sum_probs=213.5

Q ss_pred             CCCCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .++++ ++|||||+|  |||+++|++|+++|++|++++|+.+..+.+ +++....+++.++.+|++|+++++++++++.+
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            34666 999999994  599999999999999999999996544333 33333334688999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCC----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           84 IFQGKLNLLVNNAAVAV----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      ++ |++|+||||||+..    ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.++..+
T Consensus       106 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~  182 (293)
T 3grk_A          106 KW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV  182 (293)
T ss_dssp             HT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred             hc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence            99 89999999999876    467788899999999999999999999999999965  689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......   ...........|.+|+++|+|+|++++||+|+
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  259 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF---RYILKWNEYNAPLRRTVTIDEVGDVGLYFLSD  259 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999999987654322   22455666778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccccCC
Q 035642          240 AASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~~~  260 (367)
                      .++++||+.|.+|||+.+.+.
T Consensus       260 ~~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          260 LSRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             GGTTCCSCEEEESTTGGGBCC
T ss_pred             cccCCcceEEEECCCcccCCC
Confidence            999999999999999998754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=9.8e-46  Score=340.93  Aligned_cols=246  Identities=29%  Similarity=0.396  Sum_probs=220.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE--LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~--~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++  +++..+++...+.++.++.+|++|+++++++++++.+++ ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   81 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-GG   81 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            589999999999999999999999999999999887  777778887667789999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++. |+||++||.++..+.++...|++||+++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            999999999987778888999999999999999999999999999987766 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++|+++++.|++++||+||+|+||+++|++......      .....+..+.+....|.+|+++|+|+|++++||+++.+
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  241 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS  241 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999998654210      00001233445566799999999999999999999989


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      ++++|+.+.+|||+.+
T Consensus       242 ~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          242 NYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             TTCCSCEEEESSSSCC
T ss_pred             CCCCCCEEEECCCEec
Confidence            9999999999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.2e-45  Score=341.06  Aligned_cols=250  Identities=30%  Similarity=0.413  Sum_probs=221.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45666 9999999999999999999999999999999998888888777654 668999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (263)
T 3ai3_A           83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK  161 (263)
T ss_dssp             H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence            9 899999999999877788888999999999999999999999999999877789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhhc-CCCCCCCCHHHHHHHHHHHh
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSR-TPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~-~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +++++++++++.|++++||+||+|+||+++|++......      .....+....+... .|.+++++|+|+|++++||+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  241 (263)
T 3ai3_A          162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC  241 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999998653211      00011223334444 78999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++.+++++|+.+.+|||+..
T Consensus       242 s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          242 SERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             STTCTTCCSCEEEESTTCCC
T ss_pred             CccccCCCCcEEEECCCccc
Confidence            98889999999999999764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-45  Score=340.22  Aligned_cols=247  Identities=26%  Similarity=0.364  Sum_probs=220.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            3589999999999999999999999999999999998888888887667789999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++...|++||++++
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999998777888889999999999999999999999999998766 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC--h----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD--P----AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~--~----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +++++++.|++++||+||+|+||+++|++.......  .    ...+....+....|.+++++|+|+|++++||+++.++
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999986542100  0    0111234445567899999999999999999998889


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      +++|+.+.+|||+.+
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.2e-45  Score=340.79  Aligned_cols=246  Identities=29%  Similarity=0.374  Sum_probs=212.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++ ++++.+++... +.++.++.+|++|+++++++++++.+++ ++
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   83 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-GR   83 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            399999999999999999999999999999999887 78777777654 6678999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||++++
T Consensus        84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  163 (260)
T 1x1t_A           84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV  163 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHH
Confidence            99999999998777888889999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh------hhHHHHHH-hhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA------KNKIVEGL-VSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~------~~~~~~~~-~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +++++++.|++++||+||+|+||+++|++.........      ..+....+ ....|.+++++|+|+|++++||+++.+
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  243 (260)
T 1x1t_A          164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA  243 (260)
T ss_dssp             HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999999999999998754321100      01122223 445788999999999999999999888


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      ++++|+.+.+|||+..
T Consensus       244 ~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          244 AQITGTTVSVDGGWTA  259 (260)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-45  Score=341.54  Aligned_cols=246  Identities=27%  Similarity=0.389  Sum_probs=220.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            3555 99999999999999999999999999999999999888888887767789999999999999999999999999 


Q ss_pred             CCccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence            8999999999987 667788889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc--------C--ChhhhH-HHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR--------H--DPAKNK-IVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~--------~--~~~~~~-~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++++|+++++.|++++||+||+|+||+++|++.....        .  ....++ ..+.+....|.+|+++|+|+|++++
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  242 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  242 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999865420        0  000111 2334456689999999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCC
Q 035642          235 FLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG  254 (367)
                      ||+|+.++++||+.+.+|||
T Consensus       243 ~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          243 FLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHcCchhcCcCCcEEecCCC
Confidence            99999999999999999998

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.8e-46  Score=344.48  Aligned_cols=246  Identities=27%  Similarity=0.314  Sum_probs=211.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEccCCCHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------------QTELNERLQEWKLKGLKVTGSVCDLSSRE   72 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~   72 (367)
                      ..++++ ++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            345666 99999999999999999999999999999987            67777777777777889999999999999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccc
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGV  151 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~  151 (367)
                      +++++++++.+.+ +++|+||||||+.....    +.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        88 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999999 89999999999875443    5899999999999999999999999998764 7899999999998


Q ss_pred             cCC----CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHH------HHHhhcCCCC
Q 035642          152 TAA----PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIV------EGLVSRTPIC  221 (367)
Q Consensus       152 ~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~------~~~~~~~p~~  221 (367)
                      .+.    ++..+|++||+|+++|+++++.|++++||+||+|+||+|+|++..............      ..+....| +
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            876    667789999999999999999999999999999999999999875321111100000      01223355 7


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++.+|+|+|++++||+|++++++||+.|.+|||+..
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            889999999999999999999999999999999864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.1e-45  Score=337.97  Aligned_cols=245  Identities=24%  Similarity=0.323  Sum_probs=214.6

Q ss_pred             CCCCC-eEEEEcCC-ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGT-RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas-~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++++ ++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.+
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34566 99999998 59999999999999999999999999999988888654 36899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      ++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+++ +.++||++||.++..+.++...|++
T Consensus        98 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  176 (266)
T 3o38_A           98 KA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA  176 (266)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             Hh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence            99 899999999999888888899999999999999999999999999999876 6789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......    +..+.+....|.+++.+|+|+|++++||++++++
T Consensus       177 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~  252 (266)
T 3o38_A          177 AKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS----ELLDRLASDEAFGRAAEPWEVAATIAFLASDYSS  252 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH----HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999987654322    2345556678999999999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 035642          243 YITGQVICVDGGMT  256 (367)
Q Consensus       243 ~itG~~i~vdgG~~  256 (367)
                      ++||+.|.+|||++
T Consensus       253 ~~tG~~i~vdgG~~  266 (266)
T 3o38_A          253 YMTGEVVSVSSQRA  266 (266)
T ss_dssp             TCCSCEEEESSCCC
T ss_pred             CccCCEEEEcCCcC
Confidence            99999999999974

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2e-45  Score=338.96  Aligned_cols=249  Identities=27%  Similarity=0.391  Sum_probs=207.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            356666 9999999999999999999999999999999999988887766   567999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC----CCEEEEecCcccccCCCCCcc
Q 035642           85 FQGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG----NGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~----~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      + +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++    .++||++||.++..+.++...
T Consensus        81 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           81 F-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             H-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             c-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            9 89999999999876 56677789999999999999999999999999997653    679999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++....... ...+....+....|.+++.+|+|+|++++||+++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  238 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGE-DSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhccc-CcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999987655322 1122445566778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccccC
Q 035642          240 AASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~~  259 (367)
                      +++++||+.|.+|||+.+..
T Consensus       239 ~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          239 QASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GGTTCCSCEEEESTTTTC--
T ss_pred             cccCcCCcEEEecCCcccCC
Confidence            99999999999999998753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5.3e-46  Score=349.48  Aligned_cols=245  Identities=25%  Similarity=0.294  Sum_probs=217.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|++|+++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45666 999999999999999999999999999999873  456666667766778899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      ++ +++|+||||||... ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|++
T Consensus       125 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~a  201 (294)
T 3r3s_A          125 AL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_dssp             HH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHH
Confidence            99 89999999999865 467888999999999999999999999999999854  489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.........   ....+....|.+|+++|+|+|++++||+|++++
T Consensus       202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~  278 (294)
T 3r3s_A          202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD---KIPQFGQQTPMKRAGQPAELAPVYVYLASQESS  278 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG---GSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998433222211   233455678999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+.|.||||+++
T Consensus       279 ~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          279 YVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.7e-45  Score=336.30  Aligned_cols=242  Identities=30%  Similarity=0.353  Sum_probs=206.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+. +++++   ++...+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3555 999999999999999999999999999999998 66654   334446689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (249)
T 2ew8_A           81 -GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  159 (249)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHH
Confidence             8999999999998777888889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccc-cccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD-AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++++++++.|++++||+||+|+||+++|++.. .....  ..+....+.  .|.+++++|+|+|++++||++++++++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~  235 (249)
T 2ew8_A          160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA--MFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFI  235 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc--hhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCC
Confidence            9999999999999999999999999999999865 32111  001112221  688899999999999999999888999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       236 tG~~~~vdGG~~~  248 (249)
T 2ew8_A          236 TGQTLAVDGGMVR  248 (249)
T ss_dssp             CSCEEEESSSCCC
T ss_pred             CCcEEEECCCccC
Confidence            9999999999764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-45  Score=339.33  Aligned_cols=244  Identities=27%  Similarity=0.402  Sum_probs=222.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ..++ ++|||||++|||+++|++|+++|++|++++ |+.++.++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            3445 999999999999999999999999999887 77777777778877777889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        90 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  168 (256)
T 3ezl_A           90 -GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  168 (256)
T ss_dssp             -CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHH
Confidence             8999999999998888888899999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||+++|++.....     +.....+....|.+++++|+|+|++++||+++++++++
T Consensus       169 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  243 (256)
T 3ezl_A          169 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-----PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFST  243 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCc
Confidence            9999999999999999999999999999999876542     22455666778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+.+
T Consensus       244 G~~i~vdgG~~~  255 (256)
T 3ezl_A          244 GADFSLNGGLHM  255 (256)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CcEEEECCCEeC
Confidence            999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3e-45  Score=341.30  Aligned_cols=244  Identities=30%  Similarity=0.445  Sum_probs=218.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ ++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            355666 99999999999999999999999999999999998888888876544 7889999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC----CEEEEecCcccccCCCCCc-c
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN----GIIVFISSVAGVTAAPLTP-L  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~----g~IV~iSS~~~~~~~~~~~-~  159 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.    |+||++||.++..+.++.. .
T Consensus       103 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~  181 (276)
T 2b4q_A          103 S-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA  181 (276)
T ss_dssp             C-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence            9 89999999999987778888899999999999999999999999999987655    8999999999998888888 9


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh--cCCCCCCCCHHHHHHHHHHHh
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      |++||+++++++++++.|++++||+||+|+||+++|++.......     ....+..  ..|.+++++|+|+|++++||+
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  256 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-----PQALEADSASIPMGRWGRPEEMAALAISLA  256 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-----HHHHHHHHHTSTTSSCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-----HHHHHHhhcCCCCCCcCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999986542211     1222333  678999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 035642          238 FPAASYITGQVICVDGGMT  256 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~  256 (367)
                      ++.+++++|+.+.+|||+.
T Consensus       257 s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          257 GTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEeCCCcc
Confidence            9888999999999999975

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.4e-45  Score=342.71  Aligned_cols=243  Identities=26%  Similarity=0.340  Sum_probs=218.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH-hcCCcEEEEEccCCCHH------------
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWK-LKGLKVTGSVCDLSSRE------------   72 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~------------   72 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++ |+.++++++.+++. ..+.++.++.+|++|++            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            4555 999999999999999999999999999999 99998888888886 45678999999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCC--------------HHHHHHhHHHhhHHHHHHHHHHHHH
Q 035642           73 -----QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT--------------AEYMSTLRSTNFESVFHLSKLAHPL  133 (367)
Q Consensus        73 -----sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~--------------~e~~~~~~~vNv~g~~~l~~~~~~~  133 (367)
                           +++++++++.+.+ +++|+||||||+....++.+.+              .++|++++++|+.|+++++++++|+
T Consensus        86 ~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                 9999999999999 8999999999998777777788              8999999999999999999999999


Q ss_pred             HHcCC------CCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh
Q 035642          134 LKASG------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK  207 (367)
Q Consensus       134 m~~~~------~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~  207 (367)
                      |++++      .|+||++||.++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ . . . +  
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~-~--  238 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-P-P--  238 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-C-H--
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-C-H--
Confidence            98776      69999999999999999999999999999999999999999999999999999999998 4 2 1 1  


Q ss_pred             hHHHHHHhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          208 NKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       208 ~~~~~~~~~~~p~~-~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                       +....+....|.+ |+++|+|+|++++||+++.+.++||+.+.+|||+.+.
T Consensus       239 -~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          239 -AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence             2344455678888 9999999999999999999999999999999998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7e-45  Score=332.90  Aligned_cols=239  Identities=28%  Similarity=0.382  Sum_probs=214.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   +  +.++.+|++|+++++++++++.+++ 
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL-   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            3555 9999999999999999999999999999999988777665543   2  6788899999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.+ ..+.++...|++||++
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            899999999999877788888999999999999999999999999999887789999999998 8888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.|++++||+||+|+||+++|++.....  .   +....+....|.+++++|+|+|++++||+++++.+++|
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~---~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG  229 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP--E---KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG  229 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC--H---HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC--H---HHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999999999999999999865431  1   13344456678999999999999999999988899999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      +.+.+|||+.+.
T Consensus       230 ~~~~vdgG~~~~  241 (245)
T 1uls_A          230 QVLFVDGGRTIG  241 (245)
T ss_dssp             CEEEESTTTTTT
T ss_pred             CEEEECCCcccC
Confidence            999999998753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3e-45  Score=341.40  Aligned_cols=249  Identities=28%  Similarity=0.453  Sum_probs=222.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            4555 99999999999999999999999999999999998888888887767789999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHH--HHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL--LKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~--m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.  |++++.|+||++||.++..+.++...|++||
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence            89999999999987778888899999999999999999999999999  8877779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh------hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK------NKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++++++++.|++++||+||+|+||+++|++..........      .+....+....|.+++++|+|+|++++||++
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  257 (277)
T 2rhc_B          178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG  257 (277)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999986532110000      1233444556789999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      +++++++|+.+.+|||+..
T Consensus       258 ~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          258 PGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             chhcCCCCcEEEECCCccc
Confidence            8889999999999999754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.7e-45  Score=337.47  Aligned_cols=248  Identities=25%  Similarity=0.317  Sum_probs=214.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            44565 9999999999999999999999999999999998888887777643  33788999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      .+ + +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++|
T Consensus        83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            98 7 999999999887778888899999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-----hhhhHH-HHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-----PAKNKI-VEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-----~~~~~~-~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      |+++++++++++.|++++||+||+|+||+++|++.......     ....+. ...+....|.+|+++|+|+|++++||+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  240 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA  240 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986521000     000011 233445678999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 035642          238 FPAASYITGQVICVDGGMT  256 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~  256 (367)
                      ++.+++++|+.+.+|||+.
T Consensus       241 s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          241 SEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEeCCCcc
Confidence            9888999999999999975

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=3.8e-45  Score=339.12  Aligned_cols=242  Identities=28%  Similarity=0.456  Sum_probs=218.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i  104 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF-GKV  104 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            3999999999999999999999999999998 66667777777777667889999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||+....++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++..+.++...|++||+|+++
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (269)
T 3gk3_A          105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG  184 (269)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHH
Confidence            99999999988888888999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      |+++++.|++++||+||+|+||+++|++........    ....+....|.+++++|+|+|++++||+++++.++||+.|
T Consensus       185 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          185 FTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV----LEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH----HHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            999999999999999999999999999976543221    1114456789999999999999999999999999999999


Q ss_pred             EeCCCccc
Q 035642          250 CVDGGMTV  257 (367)
Q Consensus       250 ~vdgG~~~  257 (367)
                      .+|||+.+
T Consensus       261 ~vdgG~~~  268 (269)
T 3gk3_A          261 AINGGMHM  268 (269)
T ss_dssp             EESTTSCC
T ss_pred             EECCCEeC
Confidence            99999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.3e-45  Score=334.58  Aligned_cols=236  Identities=20%  Similarity=0.241  Sum_probs=211.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccC--CCHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDL--SSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dl--sd~~sv~~~~~~~~   82 (367)
                      ..+++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|+  +|+++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            34566 99999999999999999999999999999999999998888886653 3788899999  99999999999999


Q ss_pred             HHcCCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      +.+ +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|+
T Consensus        88 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           88 VNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            999 89999999999853 4678889999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|+++. |+||+|+||+++|++.......             .+..++.+|+|+|++++||+|+++
T Consensus       167 asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~-------------~~~~~~~~p~dva~~~~~L~s~~~  232 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT-------------EDPQKLKTPADIMPLYLWLMGDDS  232 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT-------------CCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc-------------cchhccCCHHHHHHHHHHHcCccc
Confidence            99999999999999999986 9999999999999976432211             223457799999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      +++||+.|.+|||+..
T Consensus       233 ~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          233 RRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             TTCCSCEEESSCC---
T ss_pred             cCCCCCEEEeCCCcCC
Confidence            9999999999999854

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5e-45  Score=338.60  Aligned_cols=242  Identities=27%  Similarity=0.401  Sum_probs=215.0

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++|+.+..          ......+.+|++|+++++++++++.+.+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            44556 999999999999999999999999999999987643          1246678899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        80 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  158 (269)
T 3vtz_A           80 -GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKH  158 (269)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHH
Confidence             8999999999998888888899999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |+++|+++++.|+++ ||+||+|+||+++|++......      .....+..+.+....|.+|+++|+|+|++++||+|+
T Consensus       159 a~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  237 (269)
T 3vtz_A          159 ALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASD  237 (269)
T ss_dssp             HHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            999999999999998 8999999999999998654211      111133455666778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccccCC
Q 035642          240 AASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~~~  260 (367)
                      .++++||+.|.+|||+.....
T Consensus       238 ~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          238 RSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             GGTTCCSCEEEESTTGGGBCC
T ss_pred             ccCCCcCcEEEECCCccccCC
Confidence            999999999999999987643

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=7.5e-45  Score=335.26  Aligned_cols=246  Identities=34%  Similarity=0.511  Sum_probs=220.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   89 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-   89 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4555 99999999999999999999999999999999998888888887767789999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  169 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKT  169 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence            89999999999864 35677889999999999999999999999999998888899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++++++++.|++++||+||+|+||+++|++.........   ....+....|.+++++|+|+|++++||+++.+.+++
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~t  246 (260)
T 2zat_A          170 ALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA---RKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYIT  246 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHH---HHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999999999999999998654222211   223334456889999999999999999998889999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+..
T Consensus       247 G~~~~vdgG~~~  258 (260)
T 2zat_A          247 GETVVVGGGTAS  258 (260)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.8e-45  Score=344.08  Aligned_cols=244  Identities=32%  Similarity=0.419  Sum_probs=218.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+++
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4566 99999999999999999999999999999998764 444555566667889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..+|++||
T Consensus       124 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  200 (291)
T 3ijr_A          124 -GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATK  200 (291)
T ss_dssp             -SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHH
Confidence             899999999998754 56788899999999999999999999999999854  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++......    .+....+....|.+|+++|+|+|++++||+|++++++
T Consensus       201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  276 (291)
T 3ijr_A          201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD----EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYV  276 (291)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC----HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC----HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            999999999999999999999999999999998654322    1234556677899999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      ||+.|.+|||+.+.
T Consensus       277 tG~~i~vdGG~~~~  290 (291)
T 3ijr_A          277 TGQMIHVNGGVIVN  290 (291)
T ss_dssp             CSCEEEESSSCCCC
T ss_pred             cCCEEEECCCcccC
Confidence            99999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-44  Score=341.31  Aligned_cols=250  Identities=27%  Similarity=0.417  Sum_probs=220.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~---~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.   ++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            44666 999999999999999999999999999999999998888888876665   79999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCC--ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-CCCcc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKE--ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-PLTPL  159 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~--~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~~~~~  159 (367)
                      +++ +++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+. ++...
T Consensus       102 ~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~  179 (297)
T 1xhl_A          102 AKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPY  179 (297)
T ss_dssp             HHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHH
T ss_pred             Hhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcch
Confidence            999 89999999999876666  78889999999999999999999999999998776 999999999998887 88999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh----hhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |++||+++++++++++.|++++||+||+|+||+++|++.........    ..+....+....|.+++++|+|+|++++|
T Consensus       180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  259 (297)
T 1xhl_A          180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF  259 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998754321110    11223344455789999999999999999


Q ss_pred             HhCCC-CCCccccEEEeCCCcccc
Q 035642          236 LCFPA-ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~-~~~itG~~i~vdgG~~~~  258 (367)
                      |+++. +++++|+.+.+|||+...
T Consensus       260 l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          260 LADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhCCcccCCccCcEEEECCCcccc
Confidence            99987 889999999999998764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=8.6e-45  Score=335.40  Aligned_cols=238  Identities=18%  Similarity=0.238  Sum_probs=199.9

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +..|++++ ++|||||++|||+++|++|+++|++|++++|+.+++.+..++.   +  +.++.+|++|+++++++++++.
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHHHHHHHHH
Confidence            45567777 9999999999999999999999999999999987764444332   2  6788999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +.+ +++|+||||||+..... .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        95 ~~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  172 (260)
T 3gem_A           95 TQT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCA  172 (260)
T ss_dssp             HHC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHH
T ss_pred             Hhc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHH
Confidence            999 89999999999876655 5668899999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+++++.|+++ +|+||+|+||++.|++...       ...........|.+++++|+|+|++++||+  +++
T Consensus       173 sKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~-------~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~  242 (260)
T 3gem_A          173 TKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD-------AAYRANALAKSALGIEPGAEVIYQSLRYLL--DST  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----------------------CCSCCCCCTHHHHHHHHHHH--HCS
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC-------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCC
Confidence            999999999999999998 7999999999999986531       113344556789999999999999999999  688


Q ss_pred             CccccEEEeCCCcccc
Q 035642          243 YITGQVICVDGGMTVN  258 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~  258 (367)
                      ++||+.|.+|||+.+.
T Consensus       243 ~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          243 YVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             SCCSCEEEESTTTTTC
T ss_pred             CCCCCEEEECCCcccC
Confidence            9999999999999864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6e-45  Score=340.23  Aligned_cols=246  Identities=25%  Similarity=0.325  Sum_probs=211.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEccCCCHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------------QTELNERLQEWKLKGLKVTGSVCDLSSREQ   73 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s   73 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|+++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            34566 99999999999999999999999999999998            677777777777778899999999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA  153 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~  153 (367)
                      ++++++++.+++ +++|+||||||+....  .+.+.++|++++++|+.|+++++++++|+|  .+.|+||++||.++..+
T Consensus        86 v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~  160 (287)
T 3pxx_A           86 VSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIA  160 (287)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhccc
Confidence            999999999999 8999999999987654  336889999999999999999999999998  34689999999988765


Q ss_pred             C-----------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc------C---ChhhhHHHHH
Q 035642          154 A-----------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR------H---DPAKNKIVEG  213 (367)
Q Consensus       154 ~-----------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~------~---~~~~~~~~~~  213 (367)
                      .           ++..+|++||+++++|+++++.|++++||+||+|+||+++|++.....      .   ..........
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T 3pxx_A          161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA  240 (287)
T ss_dssp             HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence            5           566789999999999999999999999999999999999999875321      1   0111111111


Q ss_pred             --HhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          214 --LVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       214 --~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                        .....| +++++|+|+|++++||+|++++++||+.|.||||+++.
T Consensus       241 ~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          241 FPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             GGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence              233455 88999999999999999999999999999999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-44  Score=336.76  Aligned_cols=248  Identities=28%  Similarity=0.438  Sum_probs=219.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~---~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.   ++.++.+|++|+++++++++++.++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            445 999999999999999999999999999999999998888888876555   7999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCC----ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-CCCcc
Q 035642           85 FQGKLNLLVNNAAVAVPKE----ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-PLTPL  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~----~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~~~~~  159 (367)
                      + +++|+||||||+....+    +.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+. ++...
T Consensus        84 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           84 F-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             H-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred             c-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccH
Confidence            9 89999999999876665    77889999999999999999999999999998665 999999999998887 88899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh----hhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |++||+++++++++++.|++++||+||+|+||+++|++.........    ..+....+....|.+++++|+|+|++++|
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~  241 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998754321110    11233344455789999999999999999


Q ss_pred             HhCCC-CCCccccEEEeCCCcccc
Q 035642          236 LCFPA-ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~-~~~itG~~i~vdgG~~~~  258 (367)
                      |+++. +.+++|+.+.+|||+.+.
T Consensus       242 l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          242 LADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hcCcccccCccCCeEEECCCcccc
Confidence            99987 889999999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2e-45  Score=340.80  Aligned_cols=240  Identities=28%  Similarity=0.402  Sum_probs=212.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.+.++           ....+.+|++|.++++++++++.+.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            455666 9999999999999999999999999999999876432           1134578999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        92 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  170 (266)
T 3uxy_A           92 L-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK  170 (266)
T ss_dssp             H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHH
Confidence            9 899999999999888888899999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC--hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD--PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++.......  ....+....+....|.+|+++|+|+|++++||+|+.++
T Consensus       171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  250 (266)
T 3uxy_A          171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAAR  250 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999987543211  11123445667788999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+.|.+|||+.+
T Consensus       251 ~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          251 YLCGSLVEVNGGKAV  265 (266)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCcCCEEEECcCEeC
Confidence            999999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.7e-45  Score=335.75  Aligned_cols=245  Identities=30%  Similarity=0.404  Sum_probs=184.6

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            355666 9999999999999999999999999999999999999999999887889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           85 FQGKLNLLVNNAAVA---VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~---~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      + +++|+||||||+.   ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.   ++...|+
T Consensus        84 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 F-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             H-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             c-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            9 8999999999984   3445677899999999999999999999999999998888999999999876   4567899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.......    +..+.+....|.+++++|+|+|++++||+++++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  235 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK----EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEA  235 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH----HHHHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999987654322    234555667889999999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|+.+.+|||..+.
T Consensus       236 ~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          236 SWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             TTCCSCEEEC-------
T ss_pred             cCCCCCEEEECCCeecC
Confidence            99999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.5e-44  Score=332.39  Aligned_cols=246  Identities=30%  Similarity=0.374  Sum_probs=215.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+  ++..+++...+.++.++.+|++|+++++++++++.+++ +
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-G   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence            344 9999999999999999999999999999999876  45556666556788899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV  158 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence            99999999999877778888999999999999999999999999999888889999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hh----hhHHHHHH-hhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PA----KNKIVEGL-VSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~----~~~~~~~~-~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++++++++.|++++||+||+|+||+++|++....... ..    .......+ ....|.+++++|+|+|++++||+++++
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  238 (255)
T 2q2v_A          159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG  238 (255)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999986532100 00    00011233 456788999999999999999999888


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      ++++|+.+.+|||+..
T Consensus       239 ~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          239 SQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCCEEEECCCccC
Confidence            9999999999999764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-44  Score=333.18  Aligned_cols=242  Identities=23%  Similarity=0.323  Sum_probs=212.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+++|||||++|||+++|++|+++|  +.|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.+++ |
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            4699999999999999999999985  78999999999888877766   4579999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++..+|++||+|
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            99999999998644 7788899999999999999999999999999998765 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC-C
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP----AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA-A  241 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~-~  241 (367)
                      +++|+++++.|+  .||+||+|+||+++|++........    ...+..+.+....|.+|+++|+|+|++++||+|+. +
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~  234 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP  234 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence            999999999998  5899999999999999987653321    12335556667789999999999999999999988 4


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      +++||+.+.+|||....
T Consensus       235 ~~itG~~i~vdg~~~~~  251 (254)
T 3kzv_A          235 DGVNGQYLSYNDPALAD  251 (254)
T ss_dssp             GGGTTCEEETTCGGGGG
T ss_pred             CCCCccEEEecCccccc
Confidence            99999999999997653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.2e-44  Score=333.09  Aligned_cols=248  Identities=24%  Similarity=0.298  Sum_probs=220.0

Q ss_pred             CCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      |++++ ++|||||+  +|||+++|++|+++|++|++++|+....+...+.....+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            45666 99999999  6699999999999999999999997655555554444443 78999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCC----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc
Q 035642           83 SIFQGKLNLLVNNAAVAV----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +++ +++|++|||||+..    ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.++..
T Consensus        83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred             HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence            999 89999999999876    466778899999999999999999999999999864  58999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.......   ......+....|.+++.+|+|+|++++||++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s  236 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF---NSILKDIEERAPLRRTTTPEEVGDTAAFLFS  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999987664332   2355666777899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccCC
Q 035642          239 PAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      +.+.+++|+.|.+|||+.....
T Consensus       237 ~~~~~~tG~~i~vdGG~~~~~~  258 (266)
T 3oig_A          237 DMSRGITGENLHVDSGFHITAR  258 (266)
T ss_dssp             GGGTTCCSCEEEESTTGGGCCC
T ss_pred             CchhcCcCCEEEECCCeEEeee
Confidence            9899999999999999988744

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-44  Score=331.92  Aligned_cols=243  Identities=31%  Similarity=0.453  Sum_probs=212.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.++ ++..+++.    + .++.+|++|+++++++++++.+.+ +
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~-g   76 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL-G   76 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            445 99999999999999999999999999999999887 66666553    4 788999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+++
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  156 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL  156 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHH
Confidence            99999999999877788888999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++++++++.|++++||+||+|+||+++|++......... ..+....+....|.+++++|+|+|++++||+++.+++++|
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G  236 (256)
T 2d1y_A          157 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG  236 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence            999999999999999999999999999998654210000 0112223445678899999999999999999988889999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      +.+.+|||+...
T Consensus       237 ~~~~v~gG~~~~  248 (256)
T 2d1y_A          237 AILPVDGGMTAS  248 (256)
T ss_dssp             CEEEESTTGGGB
T ss_pred             CEEEECCCcccc
Confidence            999999998764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=8.4e-45  Score=335.94  Aligned_cols=245  Identities=26%  Similarity=0.382  Sum_probs=219.8

Q ss_pred             CCCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTEL-NERLQEWKL-KGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         6 ~~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~-~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .+++++ ++|||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.. .+.++.++.+|++|++++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            356777 99999999  9999999999999999999999886554 555666543 377899999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--CCCc
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--PLTP  158 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--~~~~  158 (367)
                      +.+.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.  ++..
T Consensus        95 ~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           95 VVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence            99999 89999999999988888888999999999999999999999999999998888999999999988765  5788


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|++||+|+++|+++++.|+++. |+||+|+||+++|++.....     .+..+.+....|.+|+++|+|+|++++||++
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s  247 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP-----KETQQLWHSMIPMGRDGLAKELKGAYVYFAS  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC-----HHHHHHHHTTSTTSSCEETHHHHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC-----HHHHHHHHhcCCCCCCcCHHHHHhHhheeec
Confidence            99999999999999999999887 99999999999999876442     1244556677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++++||+.|.+|||+++
T Consensus       248 ~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          248 DASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TTCTTCCSCEEEESTTGGG
T ss_pred             CccccccCCEEEECCceec
Confidence            9999999999999999976

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.3e-45  Score=340.63  Aligned_cols=242  Identities=18%  Similarity=0.224  Sum_probs=217.5

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-------ELNERLQEWKLKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-------~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      +.|++++ ++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+.++.++.+|++|++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            3466777 9999999999999999999999999999999976       4667777777778899999999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-C
Q 035642           77 LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-P  155 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-~  155 (367)
                      +++++.+++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+. +
T Consensus        83 ~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           83 AVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            999999999 89999999999988888889999999999999999999999999999988888999999999998875 7


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      +..+|++||+|+++|+++++.|++++||+||+|+|| ++.|++....            .....|.+|+++|+|+|++++
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~------------~~~~~~~~r~~~pedvA~~~~  229 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL------------LGGDEAMARSRKPEVYADAAY  229 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH------------HTSCCCCTTCBCTHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh------------ccccccccCCCCHHHHHHHHH
Confidence            789999999999999999999999999999999999 6888875432            223457889999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccccCC
Q 035642          235 FLCFPAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      ||+++.+ ++||+.+.+|||+...+.
T Consensus       230 ~l~s~~~-~~tG~~i~~dgg~~~~g~  254 (285)
T 3sc4_A          230 VVLNKPS-SYTGNTLLCEDVLLESGV  254 (285)
T ss_dssp             HHHTSCT-TCCSCEEEHHHHHHHHTC
T ss_pred             HHhCCcc-cccceEEEEcCchhccCc
Confidence            9999888 999999999999876543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.3e-44  Score=331.56  Aligned_cols=238  Identities=29%  Similarity=0.377  Sum_probs=219.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||++|||+++|++|+++|++|++ ..|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i  105 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH-GAW  105 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            49999999999999999999999999866 5678888888888888878899999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |+||||||+....++.+.+.++|++.+++|+.|++++++++++.|. +++.|+||++||.++..+.++...|++||+|++
T Consensus       106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  185 (267)
T 4iiu_A          106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGII  185 (267)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHH
Confidence            9999999998888888899999999999999999999999988886 566799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +|+++++.|++++||+||+|+||+++|++....      ...........|.+++++|+|+|++++||++++++++||+.
T Consensus       186 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~  259 (267)
T 4iiu_A          186 GATKALAIELAKRKITVNCIAPGLIDTGMIEME------ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQV  259 (267)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhcCeEEEEEEEeeecCCccccc------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCE
Confidence            999999999999999999999999999987543      22455666788999999999999999999999999999999


Q ss_pred             EEeCCCc
Q 035642          249 ICVDGGM  255 (367)
Q Consensus       249 i~vdgG~  255 (367)
                      |.+|||+
T Consensus       260 i~vdGG~  266 (267)
T 4iiu_A          260 ISINGGM  266 (267)
T ss_dssp             EEESTTC
T ss_pred             EEeCCCc
Confidence            9999996

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=9.2e-45  Score=333.87  Aligned_cols=240  Identities=30%  Similarity=0.393  Sum_probs=214.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++ +
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   78 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-G   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            445 9999999999999999999999999999999998877766655   4578899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+++
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  158 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV  158 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHH
Confidence            99999999999877778888999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCC-CHHHHHHHHHHHhCCCCCCccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPG-EPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++++++++.|++++||+||+|+||+++|++.......     ....+....|.++++ +|+|+|++++||+++++++++|
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG  233 (254)
T 1hdc_A          159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR-----QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG  233 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC-----CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh-----HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCC
Confidence            9999999999999999999999999999986543211     111223446788999 9999999999999988899999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||+..
T Consensus       234 ~~~~vdgG~~~  244 (254)
T 1hdc_A          234 AELAVDGGWTT  244 (254)
T ss_dssp             CEEEESTTTTT
T ss_pred             CEEEECCCccc
Confidence            99999999865

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.8e-44  Score=333.53  Aligned_cols=247  Identities=26%  Similarity=0.404  Sum_probs=216.0

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++++ ++|||||++|||++++++|+++|++|++++|+.++ .+++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45666 99999999999999999999999999999998754 55666777666778999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC-CccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL-TPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~-~~~Y~as  163 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|  ++.|+||++||.++..+.++ ...|++|
T Consensus       105 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~as  181 (283)
T 1g0o_A          105 F-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGS  181 (283)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHH
Confidence            9 899999999999877788888999999999999999999999999998  34689999999999887664 8899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC----Ch--hhhHHHHHHhh--cCCCCCCCCHHHHHHHHHH
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH----DP--AKNKIVEGLVS--RTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~----~~--~~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~  235 (367)
                      |+++++|+++++.|++++||+||+|+||+++|++......    ..  ...+....+..  ..|.+|+++|+|+|++++|
T Consensus       182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  261 (283)
T 1g0o_A          182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998654311    00  01223344444  6899999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcc
Q 035642          236 LCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~  256 (367)
                      |+++.+++++|+.+.+|||+.
T Consensus       262 l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          262 LASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCccccCcCCCEEEeCCCcc
Confidence            999989999999999999975

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-44  Score=333.44  Aligned_cols=244  Identities=26%  Similarity=0.387  Sum_probs=207.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i   86 (264)
T 3i4f_A            8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-GKI   86 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            499999999999999999999999999999776544 444555555556789999999999999999999999999 899


Q ss_pred             cEEEEcCC--CCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc-cc-ccCCCCCccHHHHHH
Q 035642           90 NLLVNNAA--VAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV-AG-VTAAPLTPLYGPYNG  165 (367)
Q Consensus        90 D~lI~~Ag--~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~-~~-~~~~~~~~~Y~asKa  165 (367)
                      |+||||||  .....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||. ++ ..+.++...|++||+
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKa  166 (264)
T 3i4f_A           87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKV  166 (264)
T ss_dssp             CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHH
T ss_pred             CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHH
Confidence            99999999  445567788899999999999999999999999999998888999999998 44 456677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||++.|++.....     ...........|.+|+++|+|+|++++||+++.+.++|
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~it  241 (264)
T 3i4f_A          167 GLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI-----QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMIT  241 (264)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH-----HHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc-----HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCC
Confidence            9999999999999999999999999999999876432     12334455668999999999999999999999999999


Q ss_pred             ccEEEeCCCccccCC
Q 035642          246 GQVICVDGGMTVNGF  260 (367)
Q Consensus       246 G~~i~vdgG~~~~~~  260 (367)
                      |+.|.+|||+.....
T Consensus       242 G~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          242 GTIIEVTGAVDVIHR  256 (264)
T ss_dssp             SCEEEESCSCCCCC-
T ss_pred             CcEEEEcCceeeccC
Confidence            999999999987644

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=5e-44  Score=334.79  Aligned_cols=244  Identities=25%  Similarity=0.298  Sum_probs=213.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHH-hcCCcEEEEEccCCC----HHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWK-LKGLKVTGSVCDLSS----REQREKLME   79 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~-~~~~~~~~~~~Dlsd----~~sv~~~~~   79 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+. ++++++.+++. ..+.++.++.+|++|    +++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            45666 999999999999999999999999999999998 88888888876 456789999999999    999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCc-----cC-----CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC------CCEEE
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEA-----LD-----TTAEYMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIV  143 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~-----~~-----~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~------~g~IV  143 (367)
                      ++.+.+ +++|+||||||+....++     .+     .+.++|++++++|+.|+++++++++|+|++++      .|+||
T Consensus        99 ~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           99 SCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            999999 899999999998776666     56     78899999999999999999999999998766      68999


Q ss_pred             EecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCC
Q 035642          144 FISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRP  223 (367)
Q Consensus       144 ~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~  223 (367)
                      ++||.++..+.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++ . .  ...   ....+....|.+++
T Consensus       178 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~---~~~~~~~~~p~~r~  250 (288)
T 2x9g_A          178 NLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEE---EKDKWRRKVPLGRR  250 (288)
T ss_dssp             EECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHH---HHHHHHHTCTTTSS
T ss_pred             EEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChH---HHHHHHhhCCCCCC
Confidence            999999999999999999999999999999999999999999999999999998 3 2  111   23444566789999


Q ss_pred             -CCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          224 -GEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       224 -~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                       ++|+|+|++++||+++.+++++|+.+.+|||+.+.
T Consensus       251 ~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence             99999999999999999999999999999998653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4e-44  Score=330.93  Aligned_cols=247  Identities=29%  Similarity=0.382  Sum_probs=216.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45666 99999999999999999999999999999999988776665543   257788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+....++.+.+.++|++.+++|+.|++++++++.|+|.+++ .|+||++||.++..+.++...|++||
T Consensus        85 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (263)
T 3ak4_A           85 -GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK  163 (263)
T ss_dssp             -TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence             8999999999998777788889999999999999999999999999998776 79999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC----C--hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH----D--PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~----~--~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++.++++++.|++++||+||+|+||+++|++......    .  ....+....+....|.+++++|+|+|++++||++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s  243 (263)
T 3ak4_A          164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS  243 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998653210    0  0001233445566899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      +.+++++|+.+.+|||+.+
T Consensus       244 ~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          244 DAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GGGTTCCSCEEEESSSSSC
T ss_pred             ccccCCCCCEEEECcCEeC
Confidence            8889999999999999753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.1e-44  Score=337.07  Aligned_cols=236  Identities=20%  Similarity=0.259  Sum_probs=209.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-------~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            55666 99999999999999999999999999999999753       56667777666889999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC--CCC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA--APL  156 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~--~~~  156 (367)
                      +++.+++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+  .++
T Consensus        82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            9999999 8999999999998888888899999999999999999999999999999888899999999999887  677


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG-VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ..+|++||+|+++|+++++.|++++||+||+|+|| +++|++.....              ..+..++.+|+|+|++++|
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~--------------~~~~~~~~~pedvA~~v~~  226 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP--------------GVDAAACRRPEIMADAAHA  226 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------------CCCGGGSBCTHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc--------------cccccccCCHHHHHHHHHH
Confidence            88999999999999999999999999999999999 68999863221              1234457799999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcccc
Q 035642          236 LCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |+|+.++++||+.+ +|||....
T Consensus       227 l~s~~~~~itG~~i-~~~g~~~~  248 (274)
T 3e03_A          227 VLTREAAGFHGQFL-IDDEVLAQ  248 (274)
T ss_dssp             HHTSCCTTCCSCEE-EHHHHHHH
T ss_pred             HhCccccccCCeEE-EcCcchhh
Confidence            99999999999999 88887664

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=6e-44  Score=331.90  Aligned_cols=242  Identities=25%  Similarity=0.313  Sum_probs=210.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEccCCCH----HHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLK-GLKVTGSVCDLSSR----EQREKLMET   80 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~----~sv~~~~~~   80 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++| +.++++++.+++... +.++.++.+|++|+    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            3455 9999999999999999999999999999999 988888888888665 66899999999999    999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCH-----------HHHHHhHHHhhHHHHHHHHHHHHHHHcCCC------CEEE
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTA-----------EYMSTLRSTNFESVFHLSKLAHPLLKASGN------GIIV  143 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~-----------e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~------g~IV  143 (367)
                      +.+.+ +++|+||||||+....++.+.+.           ++|++++++|+.|+++++++++|+|+ ++.      |+||
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv  165 (276)
T 1mxh_A           88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence            99999 89999999999987777777787           99999999999999999999999997 555      8999


Q ss_pred             EecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCC-
Q 035642          144 FISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR-  222 (367)
Q Consensus       144 ~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~-  222 (367)
                      ++||.++..+.++...|++||+++++|+++++.|++++||+||+|+||++.|+  ...  .   ......+....|.+| 
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~--~---~~~~~~~~~~~p~~r~  238 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM--P---QETQEEYRRKVPLGQS  238 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS--C---HHHHHHHHTTCTTTSC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC--C---HHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999  211  1   123344455688889 


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++|+|+|++++||+++.+.+++|+.+.+|||+.+.
T Consensus       239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            999999999999999988899999999999998653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=9e-44  Score=339.35  Aligned_cols=242  Identities=26%  Similarity=0.333  Sum_probs=217.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH-hcCCcEEEEEccCCCHH-------------
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWK-LKGLKVTGSVCDLSSRE-------------   72 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~-------------   72 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++ |+.++++++.+++. ..+.++.++.+|++|++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            555 999999999999999999999999999999 99998888888876 44678999999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCC--------------HHHHHHhHHHhhHHHHHHHHHHHHHH
Q 035642           73 ----QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT--------------AEYMSTLRSTNFESVFHLSKLAHPLL  134 (367)
Q Consensus        73 ----sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~--------------~e~~~~~~~vNv~g~~~l~~~~~~~m  134 (367)
                          +++++++++.+.+ +++|+||||||+....++.+.+              .++|++++++|+.|+++++++++|+|
T Consensus       124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999 8999999999998777777777              89999999999999999999999999


Q ss_pred             HcCC------CCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhh
Q 035642          135 KASG------NGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN  208 (367)
Q Consensus       135 ~~~~------~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~  208 (367)
                      ++++      .|+||++||.++..+.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++ ...   +   
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~---  275 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---P---  275 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---H---
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---H---
Confidence            8776      79999999999999999999999999999999999999999999999999999999998 322   1   


Q ss_pred             HHHHHHhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          209 KIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       209 ~~~~~~~~~~p~~-~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +..+.+....|++ ++++|+|+|++++||+++.+.+++|+.|.+|||+.+.
T Consensus       276 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          276 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            2344455678888 9999999999999999998999999999999998754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-44  Score=330.93  Aligned_cols=242  Identities=27%  Similarity=0.318  Sum_probs=216.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+ +
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-G   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            445 9999999999999999999999999999999998888777766   5678899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+++
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHH
Confidence            999999999998777888889999999999999999999999999998776 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC--CeEEEEEecCcccCCccccccCChhhhHHHHH-Hhh---cCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          168 NQLTKHLECEQAKD--NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEG-LVS---RTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       168 ~~l~~~la~e~~~~--gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~-~~~---~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++++++++.|++++  ||+||+|+||+++|++.........    ... +..   ..|.+++++|+|+|++++||+++++
T Consensus       159 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  234 (253)
T 1hxh_A          159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV----SKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES  234 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC----CHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhh----hHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence            99999999999887  9999999999999998654211111    111 233   5688899999999999999999989


Q ss_pred             CCccccEEEeCCCccccC
Q 035642          242 SYITGQVICVDGGMTVNG  259 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~~  259 (367)
                      ++++|+.+.+|||+...+
T Consensus       235 ~~~tG~~~~vdgG~~~~~  252 (253)
T 1hxh_A          235 SVMSGSELHADNSILGMG  252 (253)
T ss_dssp             TTCCSCEEEESSSCTTTT
T ss_pred             cCCCCcEEEECCCccccC
Confidence            999999999999987654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.4e-44  Score=328.58  Aligned_cols=242  Identities=28%  Similarity=0.408  Sum_probs=218.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC---
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ---   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~---   86 (367)
                      +++|||||++|||++++++|+++|++|+++ +|+.+++++..+++...+.++.++.+|++|.++++++++++.+.++   
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   87 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   87 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccc
Confidence            499999999999999999999999999885 7788888888888888788899999999999999999999887761   


Q ss_pred             --CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           87 --GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        87 --g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                        +++|+||||||+....++.+.+.+.|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..+|++||
T Consensus        88 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK  165 (255)
T 3icc_A           88 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK  165 (255)
T ss_dssp             SSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhH
Confidence              24999999999988788888999999999999999999999999999843  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||++.|++.........   .........|.+++++|+|+|++++||++++++++
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  242 (255)
T 3icc_A          166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM---MKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV  242 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH---HHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH---HHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCc
Confidence            999999999999999999999999999999999876544432   34455667889999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+.+
T Consensus       243 tG~~i~vdgG~~l  255 (255)
T 3icc_A          243 TGQLIDVSGGSCL  255 (255)
T ss_dssp             CSCEEEESSSTTC
T ss_pred             cCCEEEecCCeeC
Confidence            9999999999863

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.6e-44  Score=330.21  Aligned_cols=245  Identities=22%  Similarity=0.294  Sum_probs=204.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ |++
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   82 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-GRI   82 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            3599999999999999999999999999999999999999999998888899999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+|+++
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~  162 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA  162 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      |+++++.|+ + ||+||+|+||+++|++........... ...     .......+|+|+|++++||+++...+.+|+.+
T Consensus       163 l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~~-----~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~  234 (264)
T 3tfo_A          163 ISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMA-AMD-----TYRAIALQPADIARAVRQVIEAPQSVDTTEIT  234 (264)
T ss_dssp             HHHHHHHHC-S-SEEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             HHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHH-HHH-----hhhccCCCHHHHHHHHHHHhcCCccCccceEE
Confidence            999999998 5 999999999999999876543221100 000     11123579999999999999999999999999


Q ss_pred             EeCCCccccCCCCC
Q 035642          250 CVDGGMTVNGFNPT  263 (367)
Q Consensus       250 ~vdgG~~~~~~~~~  263 (367)
                      ..++|..+......
T Consensus       235 i~p~~~~~~~~~~~  248 (264)
T 3tfo_A          235 IRPTASGNAENLYF  248 (264)
T ss_dssp             EEECC---------
T ss_pred             EecCccccccCcce
Confidence            99999877655544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.5e-45  Score=335.24  Aligned_cols=238  Identities=21%  Similarity=0.318  Sum_probs=198.6

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|+.++.   .++   .+.++.++.+|++|+++++++++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD---LGDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH---TCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh---cCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            356666 999999999999999999999999999999975533   222   256899999999999999999998877 


Q ss_pred             cCCCccEEEEcCCCCCCCCc----cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc--------CCCCEEEEecCccccc
Q 035642           85 FQGKLNLLVNNAAVAVPKEA----LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA--------SGNGIIVFISSVAGVT  152 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~----~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~--------~~~g~IV~iSS~~~~~  152 (367)
                      + +++|+||||||+....++    .+.+.++|++++++|+.|+++++++++|+|++        ++.|+||++||.++..
T Consensus        77 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence            7 899999999998644322    24789999999999999999999999999987        5678999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHH
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSS  231 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~  231 (367)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.....     .+....+....|. +|+++|+|+|+
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~r~~~p~dva~  230 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-----EEARASLGKQVPHPSRLGNPDEYGA  230 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C-----HHHHHHHHHTSSSSCSCBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc-----HHHHHHHHhcCCCCCCccCHHHHHH
Confidence            88888999999999999999999999999999999999999999876532     1234455667787 99999999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          232 LVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       232 ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++||+++  +++||+.|.+|||+.+.
T Consensus       231 ~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          231 LAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHhcC--CCCCCCEEEECCCccCC
Confidence            99999964  89999999999998764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=7.8e-44  Score=332.28  Aligned_cols=246  Identities=22%  Similarity=0.276  Sum_probs=217.1

Q ss_pred             CCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++ ++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.....++.++.+|++|+++++++++++.+.
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3455 99999998  7799999999999999999999997  33444555444456889999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC----CCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           85 FQGKLNLLVNNAAVAVP----KEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~----~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      + +++|+||||||+...    .++.+ .+.++|++++++|+.++++++++++|+|+++ .|+||++||.++..+.++...
T Consensus       101 ~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  178 (280)
T 3nrc_A          101 W-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNT  178 (280)
T ss_dssp             C-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHH
T ss_pred             c-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchh
Confidence            9 899999999998754    44444 7999999999999999999999999999765 699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......   .+.........|.+++.+|+|+|++++||+++
T Consensus       179 Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~  255 (280)
T 3nrc_A          179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF---KKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD  255 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH---HHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999987765432   23556667778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccccCC
Q 035642          240 AASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~~~  260 (367)
                      ++.+++|+.|.+|||+.+...
T Consensus       256 ~~~~~tG~~i~vdgG~~~~~~  276 (280)
T 3nrc_A          256 MATGITGEVVHVDAGYHCVSM  276 (280)
T ss_dssp             GGTTCCSCEEEESTTGGGCCC
T ss_pred             ccCCcCCcEEEECCCccccCC
Confidence            999999999999999988653

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=6.3e-44  Score=328.05  Aligned_cols=237  Identities=16%  Similarity=0.157  Sum_probs=197.0

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            45666 9999999999999999999999999999999999999999999888889999999999999999999999887 


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  160 (252)
T 3h7a_A           82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKF  160 (252)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred             -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence             6899999999998888888999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEE-EEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRA-NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrv-n~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      |+++|+++++.|++++||+| |+|+||+++|++.......     .........|.+ +.+|+|+|++++||+++.....
T Consensus       161 a~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~  234 (252)
T 3h7a_A          161 GLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ-----MFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAW  234 (252)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------CCHHHHHHHHHHHHHCCGGGB
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh-----hhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcc
Confidence            99999999999999999999 9999999999988654322     222334456666 8999999999999999888888


Q ss_pred             cccEEEe
Q 035642          245 TGQVICV  251 (367)
Q Consensus       245 tG~~i~v  251 (367)
                      +|+....
T Consensus       235 ~~~i~~~  241 (252)
T 3h7a_A          235 TFEMEIR  241 (252)
T ss_dssp             CSEEEEB
T ss_pred             eeeEEee
Confidence            8887553

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=4.1e-44  Score=330.75  Aligned_cols=248  Identities=25%  Similarity=0.299  Sum_probs=214.0

Q ss_pred             CCCCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ..+++++ ++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.+.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3345666 99999999  99999999999999999999999975 33444444433234788999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT  157 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~  157 (367)
                      .+++ +++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++.
T Consensus        81 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  157 (261)
T 2wyu_A           81 KEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKY  157 (261)
T ss_dssp             HHHH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTC
T ss_pred             HHHc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCc
Confidence            9999 899999999998753    56778899999999999999999999999999864  4899999999999998999


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ..|++||+++++++++++.|++++||+||+|+||+++|++......   ..+....+....|.+++++|+|+|++++||+
T Consensus       158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~  234 (261)
T 2wyu_A          158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG---FTKMYDRVAQTAPLRRNITQEEVGNLGLFLL  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc---cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999998654321   1223444556689999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccccC
Q 035642          238 FPAASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~~~  259 (367)
                      ++.+.+++|+.+.+|||+....
T Consensus       235 s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          235 SPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBC
T ss_pred             ChhhcCCCCCEEEECCCccccC
Confidence            9889999999999999987653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-44  Score=331.47  Aligned_cols=232  Identities=28%  Similarity=0.407  Sum_probs=207.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.++..         ..++.++.+|++|+++++++++++.+++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            34555 9999999999999999999999999999999875432         2368899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC--CCCCccHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA--APLTPLYGPY  163 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~--~~~~~~Y~as  163 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  ..+...|++|
T Consensus        95 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  173 (260)
T 3un1_A           95 -GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT  173 (260)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence             8999999999998888888999999999999999999999999999999988899999999887643  4456789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++||+||+|+||+++|++...     .   ....+....|.+|+++|+|+|++++||.  ++++
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~---~~~~~~~~~p~~r~~~~~dva~av~~L~--~~~~  243 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----E---THSTLAGLHPVGRMGEIRDVVDAVLYLE--HAGF  243 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----G---GHHHHHTTSTTSSCBCHHHHHHHHHHHH--HCTT
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----H---HHHHHhccCCCCCCcCHHHHHHHHHHhc--ccCC
Confidence            9999999999999999999999999999999998643     1   2344556789999999999999999994  7889


Q ss_pred             ccccEEEeCCCcccc
Q 035642          244 ITGQVICVDGGMTVN  258 (367)
Q Consensus       244 itG~~i~vdgG~~~~  258 (367)
                      ++|+.|.+|||+...
T Consensus       244 itG~~i~vdGG~~~~  258 (260)
T 3un1_A          244 ITGEILHVDGGQNAG  258 (260)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCcEEEECCCeecc
Confidence            999999999998765

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.8e-43  Score=323.07  Aligned_cols=250  Identities=27%  Similarity=0.428  Sum_probs=223.5

Q ss_pred             CCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            3 SYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         3 ~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .|..|++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++
T Consensus         5 ~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (260)
T 3awd_A            5 YMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV   84 (260)
T ss_dssp             TTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            455677777 9999999999999999999999999999999998888888888776778999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC--c
Q 035642           82 SSIFQGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT--P  158 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--~  158 (367)
                      .+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++++.|+|++++.++||++||..+..+.++.  .
T Consensus        85 ~~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  163 (260)
T 3awd_A           85 HEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQA  163 (260)
T ss_dssp             HHHH-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCcc
Confidence            9998 89999999999876 567778899999999999999999999999999987778999999999998877776  8


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccc-cccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD-AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .|++||++++.++++++.|++++||++|+|+||+++|++.. ... .   +.....+....|.+++++|+|+|+++++++
T Consensus       164 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (260)
T 3awd_A          164 AYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-K---PELYDAWIAGTPMGRVGQPDEVASVVQFLA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-C---HHHHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-C---hHHHHHHHhcCCcCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999875 221 1   123445556678899999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++.+.+++|+.+.+|||+..
T Consensus       240 ~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          240 SDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhccCCCcEEEECCceec
Confidence            98888999999999999865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1e-43  Score=329.87  Aligned_cols=244  Identities=25%  Similarity=0.366  Sum_probs=208.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |...+++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3334599999999999999999999999999776 888888888888888778899999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC---CCCEEEEecCcccccCCC-CCccH
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS---GNGIIVFISSVAGVTAAP-LTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~---~~g~IV~iSS~~~~~~~~-~~~~Y  160 (367)
                       +++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|.+.   +.|+||++||.++..+.+ +...|
T Consensus       103 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  181 (272)
T 4e3z_A          103 -GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDY  181 (272)
T ss_dssp             -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchh
Confidence             899999999998765 678888999999999999999999999999999762   468999999999988766 67789


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++......    ......+....|.+++++|+|+|++++||+++.
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~  257 (272)
T 4e3z_A          182 AASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL----PDRAREMAPSVPMQRAGMPEEVADAILYLLSPS  257 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC----hHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999998754211    113444556788999999999999999999999


Q ss_pred             CCCccccEEEeCCCc
Q 035642          241 ASYITGQVICVDGGM  255 (367)
Q Consensus       241 ~~~itG~~i~vdgG~  255 (367)
                      +.+++|+.|.+|||+
T Consensus       258 ~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          258 ASYVTGSILNVSGGR  272 (272)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             cccccCCEEeecCCC
Confidence            999999999999995

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-44  Score=331.72  Aligned_cols=248  Identities=30%  Similarity=0.454  Sum_probs=206.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW---KLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l---~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   ...+.++.++.+|++|+++++++++++.++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            344 9999999999999999999999999999999999888888777   333457899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCC----CHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc-ccCCCCCcc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDT----TAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG-VTAAPLTPL  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~----~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~-~~~~~~~~~  159 (367)
                      + |++|+||||||+....++.+.    +.++|++++++|+.|+++++++++|+|++++ |+||++||.++ ..+.++...
T Consensus        84 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           84 F-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             H-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             c-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccH
Confidence            9 899999999998776677777    8999999999999999999999999998765 99999999998 888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-Chhh---hHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAK---NKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~---~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |++||+++++++++++.|++++||+||+|+||+++|++...... ....   ......+....|.+++++|+|+|++++|
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  241 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998654211 1110   0113344456788999999999999999


Q ss_pred             HhCCCCCC-ccccEEEeCCCcccc
Q 035642          236 LCFPAASY-ITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~~~~-itG~~i~vdgG~~~~  258 (367)
                      |+++.+.+ ++|+.+.+|||....
T Consensus       242 l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          242 LADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HcCccccCcccCcEEEECCCcccc
Confidence            99877776 999999999998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.1e-43  Score=328.73  Aligned_cols=240  Identities=28%  Similarity=0.383  Sum_probs=211.8

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+++++ ++|||||++|||++++++|+++|++|++++|+.++           +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            344555 99999999999999999999999999999998754           346788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus        72 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           72 Y-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             H-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHH
Confidence            9 899999999999877788888999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----Chh-hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPA-KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~-~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++++++++.|+++. |+||+|+||+++|++......     ... ..+....+....|.+++++|+|+|++++||++
T Consensus       151 ~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s  229 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLAS  229 (264)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999988 999999999999998654310     110 00233344456788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++++++|+.+.+|||+...
T Consensus       230 ~~~~~~tG~~i~vdGG~~~~  249 (264)
T 2dtx_A          230 REASFITGTCLYVDGGLSIR  249 (264)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhcCCCCcEEEECCCcccC
Confidence            88899999999999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-44  Score=330.88  Aligned_cols=238  Identities=27%  Similarity=0.401  Sum_probs=210.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++ +
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-G   79 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            445 9999999999999999999999999999999998877766554   3578899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+| ++ .|+||++||.++. +.++...|++||+++
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence            99999999999877778888999999999999999999999999999 55 7999999999998 777788999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++++++++.|++++||+||+|+||+++|++.....  .   .....+....|.+++++|+|+|++++||+++++++++|+
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~---~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~  231 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP--P---WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ  231 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC--H---HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC--H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            99999999999999999999999999999876431  1   233445566789999999999999999999989999999


Q ss_pred             EEEeCCCcccc
Q 035642          248 VICVDGGMTVN  258 (367)
Q Consensus       248 ~i~vdgG~~~~  258 (367)
                      .+.+|||+...
T Consensus       232 ~i~vdgG~~~~  242 (263)
T 2a4k_A          232 ALYVDGGRSIV  242 (263)
T ss_dssp             EEEESTTTTTC
T ss_pred             EEEECCCcccc
Confidence            99999998754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=6e-44  Score=330.37  Aligned_cols=245  Identities=22%  Similarity=0.241  Sum_probs=210.8

Q ss_pred             CCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .++++ ++|||||+  +|||+++|++|+++|++|++++|+....+. .+++....+++.++.+|++|+++++++++++.+
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34455 99999999  999999999999999999999999654433 344433344688999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCC----CCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc
Q 035642           84 IFQGKLNLLVNNAAVAVP----KEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~----~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~  158 (367)
                      ++ +++|+||||||+...    .++.+ .+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..
T Consensus        89 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  165 (271)
T 3ek2_A           89 HW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYN  165 (271)
T ss_dssp             HC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTT
T ss_pred             Hc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCcc
Confidence            99 899999999998764    45555 899999999999999999999999999864  58999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++......   .......+....|.+++++|+|+|++++||++
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s  242 (271)
T 3ek2_A          166 TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS---FGKILDFVESNSPLKRNVTIEQVGNAGAFLLS  242 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc---hHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999998765422   22355666778899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +.++++||+.|.+|||+...
T Consensus       243 ~~~~~~tG~~i~vdgG~~~~  262 (271)
T 3ek2_A          243 DLASGVTAEVMHVDSGFNAV  262 (271)
T ss_dssp             GGGTTCCSEEEEESTTGGGB
T ss_pred             cccCCeeeeEEEECCCeeee
Confidence            99999999999999999875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-44  Score=330.06  Aligned_cols=244  Identities=29%  Similarity=0.444  Sum_probs=212.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||++++++|+++|++|++++|+.++++++.+++.    .+.++.+|++|+++++++++++.+++ 
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF-   80 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4555 99999999999999999999999999999999988777665542    47889999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG  159 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHH
Confidence            899999999998753 577788999999999999999999999999999765 599999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++++++++.|++++||+||+|+||+++|++....... ..............|++|+++|+|+|++++||+|+ ++++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~i  238 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC  238 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCc
Confidence            999999999999999999999999999999986543211 11111222233567999999999999999999997 7899


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      ||+.+.+|||+.+.
T Consensus       239 tG~~i~vdGG~~~~  252 (270)
T 1yde_A          239 TGIELLVTGGAELG  252 (270)
T ss_dssp             CSCEEEESTTTTSC
T ss_pred             CCCEEEECCCeecc
Confidence            99999999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.7e-43  Score=322.38  Aligned_cols=234  Identities=34%  Similarity=0.521  Sum_probs=208.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++   ..+++   +  +.++.+|++| ++++++++++.+.+ +++|
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~id   72 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGLH   72 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCCC
Confidence            589999999999999999999999999999999876   23333   2  6778899999 99999999999988 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--CCCccHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--PLTPLYGPYNGAMN  168 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--~~~~~Y~asKaal~  168 (367)
                      +||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.  ++...|++||++++
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~  152 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL  152 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence            9999999987778888999999999999999999999999999988778999999999998877  88899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++++++.|++++||+||+|+||++.|++.......+   +....+....|.+++++|+|+|++++||+++++++++|+.
T Consensus       153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  229 (239)
T 2ekp_A          153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNP---ELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQA  229 (239)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH---HHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            9999999999999999999999999999875432111   2344455668899999999999999999998889999999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      +.+|||+..
T Consensus       230 ~~vdgG~~~  238 (239)
T 2ekp_A          230 VAVDGGFLA  238 (239)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccc
Confidence            999999764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.3e-43  Score=325.36  Aligned_cols=237  Identities=24%  Similarity=0.290  Sum_probs=193.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++|+.+.        ...+  +.++.+|++|+++++++++++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34555 99999999999999999999999999999998752        1112  6788899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence             8999999999998777888889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHH-HHhh-------cCCCCCCCCHHHHHHHHHHHh
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE-GLVS-------RTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~-~~~~-------~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +++.++++++.|++++||+||+|+||+++|++.........   ..+ .+..       ..|.+++++|+|+|++++||+
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  228 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDD---AEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA  228 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChh---HHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999998654321111   111 1222       568889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++++++|+.+.+|||+.+
T Consensus       229 s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          229 SDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCCCCEEEECCCccc
Confidence            99889999999999999764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.4e-44  Score=328.09  Aligned_cols=237  Identities=19%  Similarity=0.227  Sum_probs=205.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--C-CcEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--G-LKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~-~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  + .++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            44555 9999999999999999999999999999999999999888888654  3 678899999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +++ +++|+||||||+....++ +.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        83 ~~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (250)
T 3nyw_A           83 QKY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS  160 (250)
T ss_dssp             HHH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred             Hhc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence            999 899999999999877777 778999999999999999999999999998888899999999999987777899999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC-C
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA-A  241 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~-~  241 (367)
                      ||+|+++|+++++.|++++||+||+|+||++.|++.....             ...|.+++.+|+|+|++++||+++. .
T Consensus       161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------------~~~~~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG-------------TPFKDEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT-------------CCSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC-------------CCcccccCCCHHHHHHHHHHHHcCCCc
Confidence            9999999999999999999999999999999999765432             2245677889999999999999854 5


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|..|.+|||....
T Consensus       228 ~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          228 VCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             EECCEEEEEEHHHHHC-
T ss_pred             eEeeEEEEEeecccccc
Confidence            57788999999997654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-44  Score=337.06  Aligned_cols=245  Identities=22%  Similarity=0.297  Sum_probs=216.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +++ ++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            455 999999999999999999999998   9999999999999998888764  5689999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      +++ |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|+
T Consensus       111 ~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  189 (287)
T 3rku_A          111 QEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC  189 (287)
T ss_dssp             GGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             Hhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHH
Confidence            999 89999999999875 5678888999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++......... ......+....|    .+|+|+|++++||+|+.+
T Consensus       190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~p----~~pedvA~~v~~l~s~~~  264 (287)
T 3rku_A          190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE-EQAKNVYKDTTP----LMADDVADLIVYATSRKQ  264 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCH-HHHHHHHTTSCC----EEHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcH-HHHHHhhcccCC----CCHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999998643222111 112222223333    389999999999999999


Q ss_pred             CCccccEEEeCCCccccC
Q 035642          242 SYITGQVICVDGGMTVNG  259 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~~  259 (367)
                      .+++|+.+.+|||.....
T Consensus       265 ~~i~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          265 NTVIADTLIFPTNQASPH  282 (287)
T ss_dssp             TEEEEEEEEEETTEEETT
T ss_pred             CeEecceEEeeCCCCCCc
Confidence            999999999999987643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=5e-43  Score=323.44  Aligned_cols=237  Identities=28%  Similarity=0.350  Sum_probs=213.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++..   ++.++.+|++|+++++++++++.+++ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-   79 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            3555 999999999999999999999999999999999888777666532   58889999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||++
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  159 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  159 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence            89999999999987777888899999999999999999999999999988778999999999999998899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++++++++.|++++||+||+|+||++.|++.. .. ...       +. ..|.+++.+|+|+|++++||+++.+.+++|
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~~-------~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G  229 (260)
T 1nff_A          160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PED-------IF-QTALGRAAEPVEVSNLVVYLASDESSYSTG  229 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CTT-------CS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hhh-------HH-hCccCCCCCHHHHHHHHHHHhCccccCCcC
Confidence            999999999999999999999999999999864 21 110       11 467889999999999999999988899999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      +.+.+|||....
T Consensus       230 ~~~~v~gG~~~~  241 (260)
T 1nff_A          230 AEFVVDGGTVAG  241 (260)
T ss_dssp             CEEEESTTGGGS
T ss_pred             CEEEECCCeecc
Confidence            999999998764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-43  Score=324.76  Aligned_cols=238  Identities=29%  Similarity=0.446  Sum_probs=197.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .+.++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   ..++.++.+|+++.+++++++++.    
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~----   82 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISKT----   82 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHTC----
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHhc----
Confidence            44555 9999999999999999999999999999999999888887776   357889999999999998888653    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++||+
T Consensus        83 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  161 (249)
T 3f9i_A           83 -SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKA  161 (249)
T ss_dssp             -SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHH
Confidence             6899999999998777777788899999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++++++++.|++++||+||+|+||++.|++.....     ......+....|.+++.+|+|+|++++||+++.+.+++
T Consensus       162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  236 (249)
T 3f9i_A          162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN-----EKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC-----HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence            9999999999999999999999999999999876542     12445566778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+.+
T Consensus       237 G~~~~vdgG~~~  248 (249)
T 3f9i_A          237 GQTLHVNGGMLM  248 (249)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCEee
Confidence            999999999865

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=7.4e-43  Score=321.49  Aligned_cols=246  Identities=28%  Similarity=0.395  Sum_probs=220.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ ++|||||+||||++++++|+++|++|++++| +.++++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            445 9999999999999999999999999999999 8888888888887667789999999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++++|++++ .++||++||..+..+.++...|++||+
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  163 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG  163 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHH
Confidence            8999999999998777778889999999999999999999999999998876 799999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.++++++.+++++||++|+|+||+++|++.......   +.....+....|.+++.+|+|+|+++++|+++.+.+++
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (261)
T 1gee_A          164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD---PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS---HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC---hhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            999999999999998899999999999999987543211   12334445567889999999999999999998888999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||+.+.
T Consensus       241 G~~~~v~gg~~~~  253 (261)
T 1gee_A          241 GITLFADGGMTLY  253 (261)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEEcCCcccC
Confidence            9999999998764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-42  Score=318.25  Aligned_cols=243  Identities=26%  Similarity=0.395  Sum_probs=217.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH-HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l-~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+++++..+++ ...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   81 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAI   81 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            58999999999999999999999999999999998888877777 4445679999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCC---ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           90 NLLVNNAAVAVPKE---ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        90 D~lI~~Ag~~~~~~---~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |+||||||.....+   +.+.+.++|++++++|+.|+++++++++|.|++++.++||++||.++..+.++...|++||++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            99999999876555   777899999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++.++++++.|++++||++|+|+||+++|++........   .....+....|.+++++|+|+|+++++++++.+.+++|
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNG  238 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSH---HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccC
Confidence            999999999999988999999999999999865421111   23344556688999999999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||+..
T Consensus       239 ~~~~v~gG~~~  249 (250)
T 2cfc_A          239 AALVMDGAYTA  249 (250)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCceec
Confidence            99999999764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.9e-43  Score=326.89  Aligned_cols=243  Identities=20%  Similarity=0.307  Sum_probs=210.4

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+  +|||++++++|+++|++|++++|+. +.++..+++....+...++.+|++|+++++++++++.+++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            455 99999999  9999999999999999999999987 4444445554332334788999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCC----CCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                       +++|+||||||+...    .++.+ .+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|
T Consensus        86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred             -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence             899999999998753    45666 789999999999999999999999999864  4899999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+++++++++++.|++++||+||+|+||+++|++......   .......+....|.+++++|+|+|++++||+++.
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~  239 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc---cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999998754321   1223444556678999999999999999999988


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      +.+++|+.+.+|||+...
T Consensus       240 ~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          240 SAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             GTTCCSCEEEESTTGGGB
T ss_pred             hcCccCCEEEECCCcCCC
Confidence            899999999999998764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=8.8e-43  Score=319.54  Aligned_cols=245  Identities=31%  Similarity=0.471  Sum_probs=218.0

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcE-EEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKV-TGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~-~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +.|++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++ .++.+|++|+++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            4456776 9999999999999999999999999999999998887777666   3456 889999999999999999998


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC--ccH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT--PLY  160 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--~~Y  160 (367)
                      + + +++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++++.++||++||.++..+.++.  ..|
T Consensus        82 ~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           82 A-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             H-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             h-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            8 7 89999999999987777888899999999999999999999999999988778999999999998887777  899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||++++.++++++.+++++||++++|+||++.|++.......+   .....+....|.+++.+|+|+|+++++++++.
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP---ELFETWLDMTPMGRCGEPSEIAAAALFLASPA  236 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH---HHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999988999999999999999875432221   23445556678899999999999999999988


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      +.+++|+.+.+|||+..
T Consensus       237 ~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          237 ASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCCEEEECCCEec
Confidence            88999999999999865

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=4.5e-43  Score=326.20  Aligned_cols=243  Identities=22%  Similarity=0.255  Sum_probs=212.5

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.+.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            344 99999999  99999999999999999999999986 444445554432347788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       +++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|+
T Consensus        83 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           83 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             -CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhH
Confidence             899999999998754    56778899999999999999999999999999864  48999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++++++++.|++++||+||+|+||+++|++......   ..+....+....|.+++++|+|+|++++||+++.+
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  236 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD---FRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  236 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc---cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999998754321   12234445566899999999999999999999888


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|+.+.+|||+...
T Consensus       237 ~~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          237 SGVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             cCCCCCEEEECCCcccC
Confidence            99999999999998764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=324.60  Aligned_cols=239  Identities=22%  Similarity=0.321  Sum_probs=206.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.++++++. ++    .++.++.+|++|+++++++.    +.+ +
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~-~   73 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV-E   73 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-C
Confidence            445 9999999999999999999999999999999987765543 22    26888999999999988444    445 7


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-CCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-~~~~Y~asKaa  166 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+ +...|++||++
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a  153 (246)
T 2ag5_A           74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (246)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHH
Confidence            89999999999877788888999999999999999999999999999887789999999999988877 88899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++.++++++.|++++||+||+|+||+++|++...... .....+....+....|.+++++|+|+|++++||+++.+.+++
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~t  233 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT  233 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999998653110 001122334455667899999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+..
T Consensus       234 G~~i~vdgG~~~  245 (246)
T 2ag5_A          234 GNPVIIDGGWSL  245 (246)
T ss_dssp             SCEEEECTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=8.2e-43  Score=326.07  Aligned_cols=244  Identities=25%  Similarity=0.313  Sum_probs=211.4

Q ss_pred             CCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.+.++.+|++|+++++++++++.+.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            555 99999999  99999999999999999999999985 444445554332346788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       +++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|+
T Consensus        98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence             899999999998754    567788999999999999999999999999999754 59999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++++++++.|++++||+||+|+||+++|++......   .......+....|.+++++|+|+|++++||+++.+
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~  252 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG---FHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWA  252 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc---hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999999999999998654321   12234445566899999999999999999999888


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|+.+.+|||+...
T Consensus       253 ~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          253 RAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             cCCCCCEEEECCCcccc
Confidence            99999999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2e-43  Score=327.52  Aligned_cols=243  Identities=21%  Similarity=0.207  Sum_probs=208.1

Q ss_pred             CCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||  ++|||++++++|+++|++|++++|+.++ ++++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            445 9999999  9999999999999999999999999765 34443332   456788999999999999999999999


Q ss_pred             cCC---CccEEEEcCCCCC-----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC
Q 035642           85 FQG---KLNLLVNNAAVAV-----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        85 ~~g---~iD~lI~~Ag~~~-----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~  156 (367)
                      + |   ++|+||||||+..     ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+ .+.+.
T Consensus        82 ~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~  157 (269)
T 2h7i_A           82 I-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPA  157 (269)
T ss_dssp             H-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTT
T ss_pred             h-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCc
Confidence            9 7   9999999999876     457788899999999999999999999999999865  389999999876 67778


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC---Chhh----hHHHHHHhhcCCCC-CCCCHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH---DPAK----NKIVEGLVSRTPIC-RPGEPDE  228 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~---~~~~----~~~~~~~~~~~p~~-~~~~~~d  228 (367)
                      +..|++||+++++++++++.|++++||+||+|+||+++|++......   ....    ....+.+....|.+ |+++|+|
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~d  237 (269)
T 2h7i_A          158 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP  237 (269)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHH
Confidence            88999999999999999999999999999999999999998654311   1110    11223445668999 7999999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +|++++||+|+.++++||+.+.+|||+...
T Consensus       238 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          238 VAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            999999999999999999999999998753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=7.7e-44  Score=327.73  Aligned_cols=235  Identities=29%  Similarity=0.455  Sum_probs=200.4

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+++.+ ++|||||++|||++++++|+++|++|++++|+.++++           .+.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            345555 9999999999999999999999999999999876432           2678899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||
T Consensus        85 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           85 H-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             T-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            9 899999999999877777788899999999999999999999999999887789999999999988877888999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.|++++||+||+|+||+++|++.......     ....+....|.+++.+|+|+|++++||+++++.++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~  238 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDE-----QRANIVSQVPLGRYARPEEIAATVRFLASDDASYI  238 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHH-----HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999986543211     12334456788999999999999999999989999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+.+
T Consensus       239 tG~~i~vdGG~~~  251 (253)
T 2nm0_A          239 TGAVIPVDGGLGM  251 (253)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCcEEEECCcccc
Confidence            9999999999765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.3e-43  Score=337.38  Aligned_cols=241  Identities=23%  Similarity=0.298  Sum_probs=214.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC----------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN----------QTELNERLQEWKLKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~----------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...+.++.++.+|++|++++++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            3555 99999999999999999999999999999998          778888888888778899999999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC------CCEEEEecCccc
Q 035642           77 LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG------NGIIVFISSVAG  150 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~------~g~IV~iSS~~~  150 (367)
                      +++++.+++ |++|+||||||+....++.+.+.++|++++++|+.|++++++++.++|.+.+      .|+||++||.++
T Consensus       104 ~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          104 LIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            999999999 8999999999998888888999999999999999999999999999987432      379999999999


Q ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHH
Q 035642          151 VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS  230 (367)
Q Consensus       151 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  230 (367)
                      ..+.++..+|++||+|+++|+++++.|++++||+||+|+|| +.|++.........     .   ...+..+..+|+|+|
T Consensus       183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----~---~~~~~~~~~~pedva  253 (322)
T 3qlj_A          183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----A---TQDQDFDAMAPENVS  253 (322)
T ss_dssp             HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------CCTTCGGGTH
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----h---ccccccCCCCHHHHH
Confidence            99999999999999999999999999999999999999999 99998765433211     0   111223567999999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ++++||+|++++++||+.|.+|||....
T Consensus       254 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          254 PLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             HHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcccc
Confidence            9999999999999999999999998774

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.6e-43  Score=324.21  Aligned_cols=234  Identities=29%  Similarity=0.446  Sum_probs=200.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++++ ++|||||++|||++++++|+++|++|++++|+.+++++           +..+.+|++|+++++++++++.+.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence            34555 99999999999999999999999999999998764332           1137899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        80 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           80 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence             8999999999998777788889999999999999999999999999998887899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.++++++.|++++||+||+|+||+++|++.....  .   .....+....|.+++++|+|+|++++||+++.+++++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~---~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~  233 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD--E---RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYIS  233 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC--H---HHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC--H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCc
Confidence            9999999999999999999999999999999865431  1   1334455667889999999999999999998889999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+.+
T Consensus       234 G~~i~vdgG~~~  245 (247)
T 1uzm_A          234 GAVIPVDGGMGM  245 (247)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=4.8e-43  Score=323.83  Aligned_cols=250  Identities=61%  Similarity=0.969  Sum_probs=195.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            455666 9999999999999999999999999999999999888888888776778999999999999999999999888


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +++++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  168 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  168 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHH
Confidence            74689999999998877777888999999999999999999999999999887789999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.+++++||++|+|+||++.|++.......    .....+....|.+++++|+|+|+++++|+++++.++
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  244 (266)
T 1xq1_A          169 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI  244 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999998899999999999999987543211    122333445688899999999999999999888899


Q ss_pred             cccEEEeCCCccccC
Q 035642          245 TGQVICVDGGMTVNG  259 (367)
Q Consensus       245 tG~~i~vdgG~~~~~  259 (367)
                      +|+.+.+|||+...+
T Consensus       245 ~G~~~~v~gG~~~~~  259 (266)
T 1xq1_A          245 TGQTICVDGGLTVNG  259 (266)
T ss_dssp             CSCEEECCCCEEETT
T ss_pred             cCcEEEEcCCccccc
Confidence            999999999987654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.3e-42  Score=323.77  Aligned_cols=241  Identities=21%  Similarity=0.325  Sum_probs=214.0

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++++++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++ ++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~  100 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ  100 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence            456677 9999999999999999999999999999999999988888777   568999999999999999999999 77


Q ss_pred             cCCCccEEEEc-CCCCCCCCc-----cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc------CCCCEEEEecCccccc
Q 035642           85 FQGKLNLLVNN-AAVAVPKEA-----LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA------SGNGIIVFISSVAGVT  152 (367)
Q Consensus        85 ~~g~iD~lI~~-Ag~~~~~~~-----~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~------~~~g~IV~iSS~~~~~  152 (367)
                      + +++|++||| ||......+     .+.+.++|++++++|+.+++++++++++.|.+      ++.|+||++||.++..
T Consensus       101 ~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          101 L-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             S-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             h-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            7 899999999 555444433     36789999999999999999999999999976      4678999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHH
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSS  231 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~  231 (367)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||++.|++......     +....+....|. +++.+|+|+|+
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~pedvA~  254 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE-----EALAKFAANIPFPKRLGTPDEFAD  254 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH-----HHHHHHHHTCCSSSSCBCHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH-----HHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999999999998765421     245556667787 89999999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          232 LVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       232 ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++||++  +.+++|+.+.+|||+.+.
T Consensus       255 ~v~~l~s--~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          255 AAAFLLT--NGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHH--CSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHc--CCCcCCcEEEECCCcccC
Confidence            9999996  479999999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=3.1e-42  Score=315.91  Aligned_cols=251  Identities=30%  Similarity=0.457  Sum_probs=224.5

Q ss_pred             CCCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642            1 MYSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         1 ~~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |+....+++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++
T Consensus         1 m~~~~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A            1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            56556677777 99999999999999999999999999999999998888888887767789999999999999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      ++.+++ +++|+||||||.....++ +.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...
T Consensus        81 ~~~~~~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  158 (255)
T 1fmc_A           81 FAISKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS  158 (255)
T ss_dssp             HHHHHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHhc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcc
Confidence            999998 899999999998766555 678999999999999999999999999998877899999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||++++.+++.++.+++++||++|+++||++.|++......    +.....+....|.+++++|+|+|+++++++++
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  234 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSP  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC----HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC----hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999997654221    12344455668899999999999999999988


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      .+.+++|+.+.+|||...
T Consensus       235 ~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          235 AASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             ccccCCCcEEEECCceec
Confidence            888899999999999764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.1e-42  Score=316.78  Aligned_cols=235  Identities=23%  Similarity=0.304  Sum_probs=207.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g   83 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-G   83 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            445 99999999999999999999999999999999999988888887767789999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+|+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGV  162 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHH
Confidence            999999999998777888899999999999999999999999999998776 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCC--CCHHHHHHHHHHHhCCCCCCcc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRP--GEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++|+++++.|++++||+||+|+||+++|++...... ..   ..... ...| +++  ++|+|+|++++|++++.+.+++
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~---~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~  236 (247)
T 2jah_A          163 NAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TA---TKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTAPHHATV  236 (247)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HH---HHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hh---hHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            999999999999999999999999999998754321 11   11111 2224 555  8999999999999998888877


Q ss_pred             ccEEEeC
Q 035642          246 GQVICVD  252 (367)
Q Consensus       246 G~~i~vd  252 (367)
                      ++. .++
T Consensus       237 ~~i-~i~  242 (247)
T 2jah_A          237 HEI-FIR  242 (247)
T ss_dssp             EEE-EEE
T ss_pred             ceE-Eec
Confidence            764 444

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.8e-43  Score=334.27  Aligned_cols=236  Identities=22%  Similarity=0.239  Sum_probs=212.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-------LNERLQEWKLKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-------~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            45666 99999999999999999999999999999999764       56677777777889999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC--CCC
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA--APL  156 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~--~~~  156 (367)
                      +++.+++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++
T Consensus       121 ~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~  199 (346)
T 3kvo_A          121 EKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQ  199 (346)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSS
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCC
Confidence            9999999 8999999999998888888999999999999999999999999999999888899999999999877  788


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV-IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ..+|++||+|+++++++++.|++ .||+||+|+||+ +.|++....             ....|.+++.+|+|+|++++|
T Consensus       200 ~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~-------------~~~~~~~r~~~pedvA~~v~~  265 (346)
T 3kvo_A          200 HCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML-------------GGPGIESQCRKVDIIADAAYS  265 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH-------------CC--CGGGCBCTHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh-------------ccccccccCCCHHHHHHHHHH
Confidence            89999999999999999999999 899999999995 888865422             223467788999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCccccC
Q 035642          236 LCFPAASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~~~  259 (367)
                      |+++ ++++||+.+ +|||+....
T Consensus       266 L~s~-~~~itG~~i-vdgg~~~~~  287 (346)
T 3kvo_A          266 IFQK-PKSFTGNFV-IDENILKEE  287 (346)
T ss_dssp             HHTS-CTTCCSCEE-EHHHHHHHT
T ss_pred             HHhc-CCCCCceEE-ECCcEehhc
Confidence            9998 899999998 999976543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-42  Score=322.12  Aligned_cols=244  Identities=29%  Similarity=0.448  Sum_probs=217.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            44555 99999999999999999999999999999999988888888887767789999999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.++||++||.++..+.++...|++||+
T Consensus       120 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  198 (285)
T 2c07_A          120 -KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA  198 (285)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHH
Confidence             8999999999998777788889999999999999999999999999998777899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.++++++.|+++.||+||+|+||+++|++.....     ......+....|.+++.+|+|+|+++++++++.+.+++
T Consensus       199 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~  273 (285)
T 2c07_A          199 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-----EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYIN  273 (285)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-----HHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCC
Confidence            9999999999999999999999999999999865431     12334455667889999999999999999998888999


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.+.+|||+.
T Consensus       274 G~~i~v~gG~~  284 (285)
T 2c07_A          274 GRVFVIDGGLS  284 (285)
T ss_dssp             SCEEEESTTSC
T ss_pred             CCEEEeCCCcc
Confidence            99999999975

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.2e-42  Score=317.46  Aligned_cols=233  Identities=25%  Similarity=0.329  Sum_probs=205.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-  104 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-  104 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-
Confidence            4555 99999999999999999999999999999999999999999988878899999999999999999999999999 


Q ss_pred             CCccEEEEcCCC-CCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~-~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||+ ....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  184 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKW  184 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHH
Confidence            899999999998 4556778889999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|+++++.|++++||+||+|+||+++|++......             ..+..++.+|+|+|++++||+++.+..++
T Consensus       185 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~p~dvA~~v~~l~s~~~~~~~  251 (262)
T 3rkr_A          185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA-------------KKSALGAIEPDDIADVVALLATQADQSFI  251 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHTCCTTCCE
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc-------------ccccccCCCHHHHHHHHHHHhcCcccccc
Confidence            99999999999999999999999999999998654321             23456778999999999999999999999


Q ss_pred             ccEEEeCCC
Q 035642          246 GQVICVDGG  254 (367)
Q Consensus       246 G~~i~vdgG  254 (367)
                      |+.+..+.|
T Consensus       252 g~~~i~p~~  260 (262)
T 3rkr_A          252 SEVLVRPTL  260 (262)
T ss_dssp             EEEEEECCC
T ss_pred             CcEEecccc
Confidence            999988765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1e-42  Score=317.85  Aligned_cols=243  Identities=30%  Similarity=0.499  Sum_probs=196.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||+||||++++++|+++|++|+++ .|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3455 99999999999999999999999999998 677777888777777667789999999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||+
T Consensus        82 -~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  160 (247)
T 2hq1_A           82 -GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA  160 (247)
T ss_dssp             -SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence             8999999999988766777778899999999999999999999999998777899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.++++++.|++++||++|+|+||++.|++.....     ......+....|.+++++|+|+|+++++++++.+.+++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  235 (247)
T 2hq1_A          161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-----DKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYIT  235 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc-----hHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCccccccc
Confidence            9999999999999999999999999999999765431     11334445567888999999999999999988888999


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.+.+|||+.
T Consensus       236 G~~~~v~gG~~  246 (247)
T 2hq1_A          236 GQVINIDGGLV  246 (247)
T ss_dssp             SCEEEESTTC-
T ss_pred             CcEEEeCCCcc
Confidence            99999999975

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-43  Score=325.95  Aligned_cols=240  Identities=22%  Similarity=0.274  Sum_probs=200.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+. .+.++.+|++|+++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34566 999999999999999999999999999999999999888888865533 4589999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccCCCCCccHH
Q 035642           85 FQGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      + |++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++  .|+||++||.++..+.++...|+
T Consensus       109 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          109 F-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             H-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            9 899999999998754 6788899999999999999999999999999998775  68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC-
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA-  240 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~-  240 (367)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.........      ......+.+++++|+|+|++++||+|.. 
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL------QANGEVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE------CTTSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh------hhhhcccccCCCCHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999999999999998765432211      0112346678899999999999999854 


Q ss_pred             CCCccccEEEeCC
Q 035642          241 ASYITGQVICVDG  253 (367)
Q Consensus       241 ~~~itG~~i~vdg  253 (367)
                      ...+++..+...+
T Consensus       262 ~~~i~~~~i~p~~  274 (281)
T 4dry_A          262 SANVLTMTVMATR  274 (281)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             cCccccEEEEecc
Confidence            4445555555443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=7.2e-43  Score=321.80  Aligned_cols=243  Identities=21%  Similarity=0.219  Sum_probs=209.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAG---FGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~---~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +++++ ++|||||++|||++++++|++   +|++|++++|+.++++++.+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            34566 999999999999999999999   8999999999999988888888654  56789999999999999999999


Q ss_pred             HHH--HcCCCcc--EEEEcCCCCCC--CCccC-CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC--CCCEEEEecCcccc
Q 035642           81 VSS--IFQGKLN--LLVNNAAVAVP--KEALD-TTAEYMSTLRSTNFESVFHLSKLAHPLLKAS--GNGIIVFISSVAGV  151 (367)
Q Consensus        81 ~~~--~~~g~iD--~lI~~Ag~~~~--~~~~~-~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~--~~g~IV~iSS~~~~  151 (367)
                      +.+  .+ |++|  +||||||+...  .++.+ .+.++|++++++|+.|+++++++++|+|+++  +.|+||++||.++.
T Consensus        82 ~~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           82 VRELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            988  66 7888  99999998643  45666 6899999999999999999999999999876  57999999999999


Q ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHH
Q 035642          152 TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSS  231 (367)
Q Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  231 (367)
                      .+.++..+|++||+|+++|+++++.|+++  |+||+|+||+++|++..........++..+.+....|.+++++|+|+|+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  238 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ  238 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence            99999999999999999999999999964  9999999999999986543210001123334445567889999999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCC
Q 035642          232 LVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       232 ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      +++||+++ ++++||+.+.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999985 6899999999986

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=9.6e-43  Score=322.74  Aligned_cols=237  Identities=20%  Similarity=0.226  Sum_probs=208.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +.+ ++|||||++|||+++|++|+++|++|++++|+.+++++..      ..++.++.+|++|+++++++++++.+.+ |
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY-G   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC-C
Confidence            444 9999999999999999999999999999999987655431      2368899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||+|+
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~  166 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV  166 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHH
Confidence            99999999999888888899999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++|+++++.|++++||+||+|+||+++|++.........    ..... ...|.+|+++|+|+|++++||++......++
T Consensus       167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~  242 (266)
T 3p19_A          167 HAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQI----KDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIR  242 (266)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHH----HHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhh----hHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccce
Confidence            999999999999999999999999999999865432211    11111 1347899999999999999999988888888


Q ss_pred             cEEEeCCCcc
Q 035642          247 QVICVDGGMT  256 (367)
Q Consensus       247 ~~i~vdgG~~  256 (367)
                      +.+....+..
T Consensus       243 ~i~i~p~~~~  252 (266)
T 3p19_A          243 EIALAPTKQQ  252 (266)
T ss_dssp             EEEEEETTCC
T ss_pred             eeEEecCCCC
Confidence            8877666543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=3e-42  Score=314.14  Aligned_cols=240  Identities=27%  Similarity=0.425  Sum_probs=216.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|+++|++|++ .+|+.++.+++.+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   80 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            48999999999999999999999999998 5899888888877777667789999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||.....++.+.+.++|++++++|+.|++++++++.|+|++++.++||++||.++..+.++...|++||++++.
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            99999999987777788899999999999999999999999999987778999999999999888999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh-CCCCCCccccE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQV  248 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~-s~~~~~itG~~  248 (367)
                      ++++++.|++++||++|+|+||+++|++.....     ......+....|.+++.+|+|+|+++++++ ++.+.+++|+.
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~  235 (244)
T 1edo_A          161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLG-----EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-----HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             HHHHHHHHhhhcCCEEEEEeeCccccchhhhcC-----hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCE
Confidence            999999999999999999999999999875431     113344556678899999999999999998 77788999999


Q ss_pred             EEeCCCcc
Q 035642          249 ICVDGGMT  256 (367)
Q Consensus       249 i~vdgG~~  256 (367)
                      +.+|||+.
T Consensus       236 ~~v~gG~~  243 (244)
T 1edo_A          236 FTIDGGIA  243 (244)
T ss_dssp             EEESTTTT
T ss_pred             EEeCCCcc
Confidence            99999975

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-42  Score=316.88  Aligned_cols=247  Identities=27%  Similarity=0.376  Sum_probs=215.7

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +.|++++ ++|||||+||||++++++|+++|++|++++|+.++.++..+++.. .+.++.++.+|++|+++++++++++.
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            4456777 999999999999999999999999999999987666655555543 26679999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCC-----
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPL-----  156 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~-----  156 (367)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.|+++++++++++|.+++ .++||++||.++..+.+.     
T Consensus        88 ~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  166 (265)
T 1h5q_A           88 ADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  166 (265)
T ss_dssp             HHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             Hhc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccc
Confidence            998 8999999999998777888889999999999999999999999999997654 489999999988765532     


Q ss_pred             --CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          157 --TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       157 --~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                        ...|++||++++.++++++.|++++||+||+|+||+++|++.....  .   .....+....|.+++.+|+|+|++++
T Consensus       167 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~dva~~~~  241 (265)
T 1h5q_A          167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD--K---KIRDHQASNIPLNRFAQPEEMTGQAI  241 (265)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--H---HHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc--h---hHHHHHHhcCcccCCCCHHHHHHHHH
Confidence              6789999999999999999999999999999999999999876531  1   13344456678899999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +|+++++.+++|+.+.+|||+..
T Consensus       242 ~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          242 LLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             hhccCchhcCcCcEEEecCCEeC
Confidence            99998888999999999999865

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=4.3e-42  Score=313.64  Aligned_cols=243  Identities=31%  Similarity=0.424  Sum_probs=217.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44556 999999999999999999999999999999999888887777754 3668899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||.....++.+.+.++|++.+++|+.|++++++++++.|++++.++||++||.++..+.++...|++||
T Consensus        83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            9 899999999999877777888999999999999999999999999999887789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.+++.++.|+++.||++|+++||+++|++.....  .   .....+....|.+++.+|+|+|+++++++++...++
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  236 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS--E---EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYI  236 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--H---HHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc--H---HHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcC
Confidence            99999999999999988999999999999999875431  1   133344456788899999999999999998878899


Q ss_pred             cccEEEeCCCc
Q 035642          245 TGQVICVDGGM  255 (367)
Q Consensus       245 tG~~i~vdgG~  255 (367)
                      +|+.+.+|||+
T Consensus       237 ~G~~~~v~gg~  247 (248)
T 2pnf_A          237 TGEVIHVNGGM  247 (248)
T ss_dssp             CSCEEEESTTC
T ss_pred             CCcEEEeCCCc
Confidence            99999999996

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=4.6e-43  Score=320.43  Aligned_cols=231  Identities=26%  Similarity=0.358  Sum_probs=204.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||++|||+++|++|++ .|++|++++|+.+.          ....+.++.+|++|+++++++++.+.  + +++|
T Consensus         6 ~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-~~id   72 (244)
T 4e4y_A            6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N-VSFD   72 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-CCEE
T ss_pred             eEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-CCCC
Confidence            899999999999999999999 78999999998651          12357899999999999999996553  5 7899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||+....++.+.+.++|++++++|+.|+++++++++|+|+++  |+||++||.++..+.++..+|++||+|+++|
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~  150 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQM  150 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999998654  8999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +++++.|++++||+||+|+||+++|++........      ...+.........|.+|+++|+|+|++++||++++++++
T Consensus       151 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~i  230 (244)
T 4e4y_A          151 TKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFM  230 (244)
T ss_dssp             HHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccc
Confidence            99999999999999999999999999876432211      011244556677899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.+.+|||++.
T Consensus       231 tG~~i~vdGG~~~  243 (244)
T 4e4y_A          231 TGGLIPIDGGYTA  243 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCeEeECCCccC
Confidence            9999999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5e-42  Score=313.60  Aligned_cols=233  Identities=26%  Similarity=0.309  Sum_probs=207.7

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccC--CCHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDL--SSREQREKLMET   80 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dl--sd~~sv~~~~~~   80 (367)
                      ...++++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .+..++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            3345666 99999999999999999999999999999999999999988887654 4666777776  999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           81 VSSIFQGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      +.+.+ +++|+||||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.++..+
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  166 (247)
T 3i1j_A           88 VEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA  166 (247)
T ss_dssp             HHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcch
Confidence            99999 8999999999986 446778889999999999999999999999999998888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          160 YGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      |++||+|+++|+++++.|+++ .||+||+|+||+++|++.......             .+..+..+|+|+|++++||+|
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~-------------~~~~~~~~p~dva~~~~~l~s  233 (247)
T 3i1j_A          167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD-------------ENPLNNPAPEDIMPVYLYLMG  233 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT-------------SCGGGSCCGGGGTHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc-------------cCccCCCCHHHHHHHHHHHhC
Confidence            999999999999999999976 799999999999999986543221             122356789999999999999


Q ss_pred             CCCCCccccEEEe
Q 035642          239 PAASYITGQVICV  251 (367)
Q Consensus       239 ~~~~~itG~~i~v  251 (367)
                      ++++++||+.|.+
T Consensus       234 ~~~~~itG~~i~~  246 (247)
T 3i1j_A          234 PDSTGINGQALNA  246 (247)
T ss_dssp             GGGTTCCSCEEEC
T ss_pred             chhccccCeeecC
Confidence            9999999999986

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=9.2e-43  Score=318.54  Aligned_cols=232  Identities=22%  Similarity=0.281  Sum_probs=205.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-e--CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-S--RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~--R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++  .+       +|+.|+++++++++++.+.+ +
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~-g   71 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG-E   71 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-S
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-C
Confidence            489999999999999999999999999999 6  9998887776665  22       23347788889999999988 8


Q ss_pred             CccEEEEcCCCCCC---CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           88 KLNLLVNNAAVAVP---KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~---~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      ++|+||||||+...   .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHH
Confidence            99999999999877   788889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc---ccccCChhhhHHHHHHhh-cCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS---DAIRHDPAKNKIVEGLVS-RTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~---~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++++|+++++.|++++||+||+|+||+++|++.   ......    +....+.. ..|.+|+++|+|+|++++||+++.
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~  227 (244)
T 1zmo_A          152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN----PELRERVDRDVPLGRLGRPDEMGALITFLASRR  227 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC----HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch----HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999987   432211    12233344 678999999999999999999999


Q ss_pred             CCCccccEEEeCCCcc
Q 035642          241 ASYITGQVICVDGGMT  256 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~  256 (367)
                      ++++||+.+.+|||+.
T Consensus       228 ~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          228 AAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TGGGTTCEEEESTTCC
T ss_pred             ccCccCCEEEeCCCCC
Confidence            9999999999999964

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.5e-42  Score=317.33  Aligned_cols=244  Identities=26%  Similarity=0.416  Sum_probs=209.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-------LKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-------~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+       .++.++.+|++|+++++++++.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            455 99999999999999999999999999999999988877766654433       5688899999999999999999


Q ss_pred             HHHHcCCCc-cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCc
Q 035642           81 VSSIFQGKL-NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        81 ~~~~~~g~i-D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +.+.+ +++ |+||||||.....++.+.+.++|++++++|+.|++++++++.|+|.+++ .|+||++||.++..+.++..
T Consensus        85 ~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  163 (264)
T 2pd6_A           85 VQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQT  163 (264)
T ss_dssp             HHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBH
T ss_pred             HHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCCh
Confidence            99999 888 9999999998777788889999999999999999999999999998766 68999999999999989999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      .|++||++++.+++.++.|++++||++|+|+||++.|++......     .....+....|.+++++|+|+|++++++++
T Consensus       164 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (264)
T 2pd6_A          164 NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFLAS  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------CTGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-----HHHHHHHHhCCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999998654321     123344456788899999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                      +.+.+++|+.+.+|||..+.
T Consensus       239 ~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          239 EDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             GGGTTCCSCEEEESTTC---
T ss_pred             CcccCCCCCEEEECCCceec
Confidence            88889999999999998753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=6.6e-42  Score=315.64  Aligned_cols=243  Identities=24%  Similarity=0.366  Sum_probs=209.0

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..|++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456766 9999999999999999999999999999999998887777666   56789999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCcc------CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCcccc
Q 035642           84 IFQGKLNLLVNNAAVAVPKEAL------DTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSVAGV  151 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~------~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~~~~  151 (367)
                      ++ +++|+||||||.....++.      +.+.++|++++++|+.+++++++++.|+|+++      +.++||++||..+.
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  161 (265)
T 2o23_A           83 KF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  161 (265)
T ss_dssp             HH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence            99 8999999999987655443      36899999999999999999999999999876      67999999999999


Q ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHH
Q 035642          152 TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVS  230 (367)
Q Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA  230 (367)
                      .+.++...|++||++++.++++++.|++++||+||+|+||+++|++.......     ....+....|. +++.+|+|+|
T Consensus       162 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva  236 (265)
T 2o23_A          162 EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLASQVPFPSRLGDPAEYA  236 (265)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH-----HHHHHHHcCCCcCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999987643211     12233455777 8999999999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++++++  .+++++|+.+.+|||+.+.
T Consensus       237 ~~~~~l~--~~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          237 HLVQAII--ENPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHH--HCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHh--hcCccCceEEEECCCEecC
Confidence            9999999  4678999999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.1e-41  Score=311.75  Aligned_cols=243  Identities=28%  Similarity=0.404  Sum_probs=216.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++... .++.++.+|++|+++++++++++.+.+ +
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   81 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF-G   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence            455 9999999999999999999999999999999998887777766432 578999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||.....++.+.+.++|++++++|+.|++++++.+++.|++++. ++||++||.++..+.++...|++||++
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA  161 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHH
Confidence            9999999999987777888899999999999999999999999999987766 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          167 MNQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       167 l~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++.++++++.|+.  +.||++++|+||++.|++..... ..   .....+....|.+++.+|+|+|+++++++++.+.++
T Consensus       162 ~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  237 (251)
T 1zk4_A          162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GA---EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA  237 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-TH---HHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-ch---hhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccc
Confidence            9999999999987  88999999999999999876432 11   122223455688899999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||++.
T Consensus       238 ~G~~~~v~gG~~~  250 (251)
T 1zk4_A          238 TGSEFVVDGGYTA  250 (251)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECCCccC
Confidence            9999999999864

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.3e-42  Score=320.20  Aligned_cols=230  Identities=20%  Similarity=0.252  Sum_probs=188.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +.+ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++ |
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  101 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF-G  101 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            445 9999999999999999999999999999999999888887776   4578899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccCCCCCccHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      ++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++  .|+||++||.++..+.++..+|++||
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  181 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK  181 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence            99999999999755 6788899999999999999999999999999998765  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+++++.|++++||+||+|+||+++|++........      .......|.+++++|+|+|++++||+|......
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV------PQADLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred             HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc------hhhhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            99999999999999999999999999999999876543221      111234577889999999999999998655443


Q ss_pred             cccE
Q 035642          245 TGQV  248 (367)
Q Consensus       245 tG~~  248 (367)
                      .++.
T Consensus       256 ~~~i  259 (272)
T 4dyv_A          256 VQFM  259 (272)
T ss_dssp             CCEE
T ss_pred             cceE
Confidence            3333

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.9e-42  Score=320.87  Aligned_cols=246  Identities=24%  Similarity=0.348  Sum_probs=216.1

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..|++++ ++|||||+||||++++++|+++|++|++++|+.++.++..+.+...+.++.++.+|++|+++++++++++.+
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence            4456776 999999999999999999999999999999998877777777665577899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCC-CCcc-CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC--CCCCcc
Q 035642           84 IFQGKLNLLVNNAAVAVP-KEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA--APLTPL  159 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~-~~~~-~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~--~~~~~~  159 (367)
                      .+ +++|+||||||.... .++. +.+.++|++++++|+.|++++++.+++.|++++.++||++||.++..+  .++...
T Consensus       108 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          108 DF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             HH-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             Hh-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            98 899999999998766 5666 778899999999999999999999999998877899999999999887  777889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||++++.++++++.|++++| +||+|+||+++|++....  .   ......+....|.+++.+|+|+|++++||+++
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~---~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  260 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--S---KDMKAKWWQLTPLGREGLTQELVGGYLYLASN  260 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--C---HHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--C---hHHHHHHHHhCCccCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999 999999999999987432  1   11333444567889999999999999999998


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      .+.+++|+.+.+|||+.+
T Consensus       261 ~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          261 ASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             GGTTCCSCEEEESTTCCC
T ss_pred             cccCccCCEEEECCCeec
Confidence            889999999999999764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.8e-42  Score=318.42  Aligned_cols=235  Identities=21%  Similarity=0.232  Sum_probs=205.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++++...+ +...+.++..+     |+++++++++++.+.+ +++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence            479999999999999999999999999999999888777655 65545555443     6677888999998888 8999


Q ss_pred             EEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      +||||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+++++
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999987 6677888899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcc---------cCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVI---------RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      |+++++.|++++||+||+|+||++         +|++...   .   ++....+....|.+++++|+|+|++++||+++.
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~---~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  228 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---N---PEHVAHVKKVTALQRLGTQKELGELVAFLASGS  228 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---C---HHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---C---hHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999         6655432   1   123334455678999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      +++++|+.+.+|||+...
T Consensus       229 ~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          229 CDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             CGGGTTCEEEESTTCCCC
T ss_pred             cCCccCCEEEECCCchhh
Confidence            999999999999998754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=8.4e-42  Score=310.66  Aligned_cols=224  Identities=19%  Similarity=0.202  Sum_probs=192.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+.+ +++|
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   79 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG-GLPE   79 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH-CSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc-CCCc
Confidence            489999999999999999999999999999999999888888773   368999999999999999999999999 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ ++||++||.++..+.++..+|++||+|+++|
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  158 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGF  158 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence            999999998777888899999999999999999999999999997765 5999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC-CCCCCccccEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVI  249 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s-~~~~~itG~~i  249 (367)
                      +++++.|++++||+||+|+||+++|++......              .+..++.+|+|+|++++|+++ +.+.+++|-.+
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH--------------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHhhccCCEEEEEeCCCccCcchhccCC--------------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            999999999999999999999999998654321              234478899999999999998 56778888766


Q ss_pred             EeCC
Q 035642          250 CVDG  253 (367)
Q Consensus       250 ~vdg  253 (367)
                      ....
T Consensus       225 ~~~~  228 (235)
T 3l6e_A          225 GRNE  228 (235)
T ss_dssp             EECC
T ss_pred             ecCC
Confidence            6543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2.6e-43  Score=336.27  Aligned_cols=246  Identities=23%  Similarity=0.203  Sum_probs=207.7

Q ss_pred             CeEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChh---------HHHHHHHHHHhc---CCcEEEEEccCCCH--H--
Q 035642           11 QNYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQT---------ELNERLQEWKLK---GLKVTGSVCDLSSR--E--   72 (367)
Q Consensus        11 ~~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~---------~~~~~~~~l~~~---~~~~~~~~~Dlsd~--~--   72 (367)
                      +++|||||++  |||+++|++|+++|++|++++|+..         +++...+.....   ...+.++.+|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            4999999986  9999999999999999998877652         222211111111   23478888999888  8  


Q ss_pred             ----------------HHHHHHHHHHHHcCCCccEEEEcCCCC--CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHH
Q 035642           73 ----------------QREKLMETVSSIFQGKLNLLVNNAAVA--VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL  134 (367)
Q Consensus        73 ----------------sv~~~~~~~~~~~~g~iD~lI~~Ag~~--~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m  134 (367)
                                      +++++++++.+++ +++|+||||||+.  ...++.+.+.++|++++++|+.|+++++++++|+|
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                            9999999999999 8999999999975  35678889999999999999999999999999999


Q ss_pred             HcCCCCEEEEecCcccccCCCCCc-cHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccccCChh------
Q 035642          135 KASGNGIIVFISSVAGVTAAPLTP-LYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRHDPA------  206 (367)
Q Consensus       135 ~~~~~g~IV~iSS~~~~~~~~~~~-~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~~~~------  206 (367)
                      +++  |+||++||.++..+.++.. +|++||+|+.+|+++++.|+++ +||+||+|+||+|+|++.........      
T Consensus       162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (329)
T 3lt0_A          162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred             hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence            764  8999999999999999986 9999999999999999999998 89999999999999999876422100      


Q ss_pred             ----------------------------------hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeC
Q 035642          207 ----------------------------------KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD  252 (367)
Q Consensus       207 ----------------------------------~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vd  252 (367)
                                                        ..+..+......|.+|+++|+|+|++++||+|++++++||+.|.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vd  319 (329)
T 3lt0_A          240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD  319 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEc
Confidence                                              0112455667789999999999999999999999999999999999


Q ss_pred             CCccccC
Q 035642          253 GGMTVNG  259 (367)
Q Consensus       253 gG~~~~~  259 (367)
                      ||+++..
T Consensus       320 GG~~~~~  326 (329)
T 3lt0_A          320 NGLNIMF  326 (329)
T ss_dssp             TTGGGCS
T ss_pred             CCeeEEe
Confidence            9998853

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=4e-41  Score=316.55  Aligned_cols=249  Identities=24%  Similarity=0.328  Sum_probs=217.6

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .+++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            345666 9999999999999999999999999999999999888888877654 66899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCcccccCCCCCccHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++++|. +.+.++||++||..+..+.++...|++
T Consensus       101 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  179 (302)
T 1w6u_A          101 VA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  179 (302)
T ss_dssp             HT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence            98 8999999999987777778889999999999999999999999999997 455689999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCC-ccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTS-LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ||++++.++++++.+++++||++|+|+||++.|+ +.........   ....+....|.+++++|+|+|+++++++++.+
T Consensus       180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~  256 (302)
T 1w6u_A          180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT---FEKEMIGRIPCGRLGTVEELANLAAFLCSDYA  256 (302)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH---HHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh---hHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcc
Confidence            9999999999999999989999999999999998 4433222111   22344566888999999999999999999888


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|+.+.+|||....
T Consensus       257 ~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          257 SWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             TTCCSCEEEESTTHHHH
T ss_pred             cccCCCEEEECCCeeec
Confidence            89999999999998654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.5e-41  Score=308.18  Aligned_cols=239  Identities=30%  Similarity=0.421  Sum_probs=208.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++|+.++++++.+++.    ...++.+|++|+++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            45666 99999999999999999999999999999999887776655432    34567899999999998886    34


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|+||||||.....++.+.+.+.|++.+++|+.+++++++++.++|++++ .|+||++||.++..+.++...|++||
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 3d3w_A           75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence             7899999999988777788889999999999999999999999999998766 79999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.|++++||++|+|+||++.|++.........   ....+....|.+++.+|+|+|+++++++++.+.++
T Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 3d3w_A          154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMT  230 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTT---HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChH---HHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence            999999999999999889999999999999998654322211   23444566788999999999999999998878899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       231 ~G~~~~v~gG~~~  243 (244)
T 3d3w_A          231 TGSTLPVEGGFWA  243 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCEEEECCCccC
Confidence            9999999999764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.3e-40  Score=309.14  Aligned_cols=248  Identities=23%  Similarity=0.309  Sum_probs=214.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|++|+++++++++++.+.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45566 999999999999999999999999999999998887777666633 2378999999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-CCccHHH
Q 035642           86 QGKLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-LTPLYGP  162 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-~~~~Y~a  162 (367)
                       +++|+||||||....  .++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.+ +...|++
T Consensus        91 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~  169 (278)
T 2bgk_A           91 -GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA  169 (278)
T ss_dssp             -SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred             -CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHH
Confidence             899999999998643  466788999999999999999999999999999887789999999999988877 7889999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh--cCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ||++++.++++++.|++++||++++|+||++.|++........  ......+..  ..+.+++.+|+|+|+++++++++.
T Consensus       170 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  247 (278)
T 2bgk_A          170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD--SSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE  247 (278)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC--HHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccc--hhHHHHhhhcccccccccCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999876543221  112222222  235678999999999999999988


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      +.+++|+.+.+|||....
T Consensus       248 ~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          248 SKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCEEEECCccccc
Confidence            889999999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-42  Score=316.33  Aligned_cols=242  Identities=24%  Similarity=0.287  Sum_probs=199.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI-FQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~-~~   86 (367)
                      +++ ++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+. + 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ-   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT-
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            344 9999999999999999999999999999999999888888888766778999999999999999999999876 7 


Q ss_pred             CCccEEEEcCC--CC-----CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           87 GKLNLLVNNAA--VA-----VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        87 g~iD~lI~~Ag--~~-----~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      +++|+||||||  +.     ...++.+.+.+.|++++++|+.+++++++++.|+|++++.|+||++||.++..+. +..+
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            89999999995  32     2456677888999999999999999999999999988778999999999887654 4678


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hcCCCCCCCCHHHHHHHHHHHhC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      |++||+++++++++++.|++++||+||+|+||+++|++........... ...... ...|.++.++|+|+|++++||+|
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVL-QDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccccc-chhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999875432111100 000011 12356677899999999999999


Q ss_pred             CCC-CCccccEEEeCC
Q 035642          239 PAA-SYITGQVICVDG  253 (367)
Q Consensus       239 ~~~-~~itG~~i~vdg  253 (367)
                      +.+ .++||+.+.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            876 489999998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.2e-41  Score=312.39  Aligned_cols=243  Identities=26%  Similarity=0.409  Sum_probs=216.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+ .++++++.+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            445 99999999999999999999999999999999 888888888887767789999999999999999999999999 


Q ss_pred             CCccEEEEcCCC-CCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--C---CEEEEecCccccc-CCCCCcc
Q 035642           87 GKLNLLVNNAAV-AVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--N---GIIVFISSVAGVT-AAPLTPL  159 (367)
Q Consensus        87 g~iD~lI~~Ag~-~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~---g~IV~iSS~~~~~-~~~~~~~  159 (367)
                      +++|+||||||. ....++.+.+.+.|++++++|+.|+++++++++|.|.+++  .   ++||++||..+.. +.++...
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  163 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGL  163 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHH
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchH
Confidence            899999999998 5566777889999999999999999999999999997543  3   8999999999887 7888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||++++.+++.++.|++++||++|+|+||++.|++....  .   +.....+....|.+++.+|+|+|+++++++++
T Consensus       164 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          164 YGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--T---QDVRDRISNGIPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--C---HHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--C---HHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999986543  1   12344555667889999999999999999987


Q ss_pred             CCC-CccccEEEeCCCccc
Q 035642          240 AAS-YITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~-~itG~~i~vdgG~~~  257 (367)
                      ... +++|+.+.+|||...
T Consensus       239 ~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          239 LASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHHTTCCSEEEEESTTSSC
T ss_pred             chhccccCCEEeECCCccC
Confidence            666 899999999999753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=6.3e-41  Score=304.18  Aligned_cols=229  Identities=22%  Similarity=0.245  Sum_probs=206.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   81 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-GDV   81 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-SSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            489999999999999999999999999999999999998888876 447789999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++ +.+++|++||..+..+.++...|++||+++++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  160 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAARA  160 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999954 46899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.+  ..||+||+|+||+++|++.........             ..++.+|+|+|++++||+++...+++|+.+
T Consensus       161 ~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~-------------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~  225 (235)
T 3l77_A          161 LVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPK-------------EKGYLKPDEIAEAVRCLLKLPKDVRVEELM  225 (235)
T ss_dssp             HHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCCG-------------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEE
T ss_pred             HHHHHhhc--CCCeEEEEEeCCccccccccccCCccc-------------ccCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence            99999554  669999999999999998765543221             126789999999999999999999999999


Q ss_pred             EeCCCcc
Q 035642          250 CVDGGMT  256 (367)
Q Consensus       250 ~vdgG~~  256 (367)
                      ..|+|..
T Consensus       226 ~~~~~~~  232 (235)
T 3l77_A          226 LRSVYQR  232 (235)
T ss_dssp             ECCTTSC
T ss_pred             EeecccC
Confidence            9999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.1e-41  Score=307.38  Aligned_cols=240  Identities=31%  Similarity=0.469  Sum_probs=215.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEE-EEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTG-SVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~-~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||++++++|+++|++|+++ +|+.+++++..+++...+.++.. +.+|++|+++++++++++.+.+ ++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-GG   80 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-TC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-CC
Confidence            489999999999999999999999999998 89998888888877766666666 8999999999999999999998 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++++.++||++||.++..+.++...|++||++++
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            99999999998777778889999999999999999999999999998877899999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      .++++++.|++++||++|+|+||++.|++.....     ......+....|.+++.+|+|+|+++++++++.+.+++|+.
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  235 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP-----QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQT  235 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCE
Confidence            9999999999988999999999999999875431     11334445567888999999999999999988778999999


Q ss_pred             EEeCCCcc
Q 035642          249 ICVDGGMT  256 (367)
Q Consensus       249 i~vdgG~~  256 (367)
                      +.+|||..
T Consensus       236 ~~v~gg~~  243 (245)
T 2ph3_A          236 LCVDGGLT  243 (245)
T ss_dssp             EEESTTCS
T ss_pred             EEECCCCC
Confidence            99999975

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.2e-41  Score=314.64  Aligned_cols=241  Identities=22%  Similarity=0.295  Sum_probs=201.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++++|||||++|||++++++|+++|++|++++|+.++++++.+++... .++.++.+|++|+++++++++++.+.+ ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~   97 (272)
T 2nwq_A           20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF-AT   97 (272)
T ss_dssp             -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG-SS
T ss_pred             cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh-CC
Confidence            3379999999999999999999999999999999999888888777543 578899999999999999999998888 89


Q ss_pred             ccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC-EEEEecCcccccCCCCCccHHHHHHH
Q 035642           89 LNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        89 iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g-~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++.| +||++||.++..+.++..+|++||++
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa  177 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAF  177 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHH
Confidence            9999999998764 678888999999999999999999999999999887778 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++|+++++.|++++||+||+|+||+++|++.........  .....   ........+|+|+|++++||+++ ..+++|
T Consensus       178 ~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~---~~~~~~~~~pedvA~~v~~l~s~-~~~~~g  251 (272)
T 2nwq_A          178 VEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDK---TYAGAHPIQPEDIAETIFWIMNQ-PAHLNI  251 (272)
T ss_dssp             HHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------CCCCBCHHHHHHHHHHHHTS-CTTEEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHH---hhccCCCCCHHHHHHHHHHHhCC-CccCcc
Confidence            9999999999999999999999999999998643211100  01111   11112357999999999999985 578999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+++|...
T Consensus       252 ~~i~v~~~~~~  262 (272)
T 2nwq_A          252 NSLEIMPVSQS  262 (272)
T ss_dssp             EEEEEEETTEE
T ss_pred             ceEEEeeccCc
Confidence            99999998543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=313.61  Aligned_cols=248  Identities=32%  Similarity=0.424  Sum_probs=215.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-----KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-----~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .+++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++..     .+.++.++.+|++|+++++++++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            4555 999999999999999999999999999999999988888888865     3668999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      .+.+ +++|+||||||.....++.+.+.++|++++++|+.|++++++++++++.+.+.|+||++||.+ ..+.++...|+
T Consensus        95 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~  172 (303)
T 1yxm_A           95 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSG  172 (303)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhH
Confidence            9999 899999999998776777888999999999999999999999999965544579999999998 77788889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+++++++++++.|++++||++|+|+||++.|++....... ........+....|.+++++|+|+|+++++|+++.+
T Consensus       173 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~  251 (303)
T 1yxm_A          173 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  251 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999998899999999999999953211110 011122334456788999999999999999999888


Q ss_pred             CCccccEEEeCCCcccc
Q 035642          242 SYITGQVICVDGGMTVN  258 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~  258 (367)
                      .+++|+.+.+|||....
T Consensus       252 ~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          252 SFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             ccCCCcEEEECCCeecc
Confidence            99999999999998764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.9e-41  Score=305.65  Aligned_cols=219  Identities=27%  Similarity=0.390  Sum_probs=193.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.+                    +|++|+++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            34556 9999999999999999999999999999999864                    7999999999998765    


Q ss_pred             CCCccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|+||||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++..+|++||
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK  134 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAIN  134 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHH
Confidence             8999999999987 5567888999999999999999999999999999865  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++++++++.|+++  |+||+|+||+++|++....... ......+......|.+++++|+|+|++++|+++  ++++
T Consensus       135 ~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~  209 (223)
T 3uce_A          135 AAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD-DRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYM  209 (223)
T ss_dssp             HHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH-HHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTC
T ss_pred             HHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh-hHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCC
Confidence            9999999999999987  9999999999999987654322 122244556677899999999999999999995  6899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+.+
T Consensus       210 tG~~i~vdgG~~~  222 (223)
T 3uce_A          210 TGTVIDVDGGALL  222 (223)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCcEEEecCCeec
Confidence            9999999999865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=6.5e-41  Score=307.22  Aligned_cols=235  Identities=21%  Similarity=0.269  Sum_probs=196.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++++++.+++   +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            37999999999999999999999999999999998888777766   3578899999999999999999998888 8999


Q ss_pred             EEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      +||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+++++
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            9999999863 467778899999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      |+++++.|++++||+||+|+||+++ |++.........  ......   .......+|+|+|++++||+++ ..+++|+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~--~~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~  230 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD--GKAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINT  230 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC---------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch--HHHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeE
Confidence            9999999999999999999999999 998642111000  011111   1112346999999999999986 56889999


Q ss_pred             EEeCCCc
Q 035642          249 ICVDGGM  255 (367)
Q Consensus       249 i~vdgG~  255 (367)
                      +.++++.
T Consensus       231 i~v~~~~  237 (248)
T 3asu_A          231 LEMMPVT  237 (248)
T ss_dssp             EEECCTT
T ss_pred             EEEcccc
Confidence            9999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=5.1e-41  Score=333.09  Aligned_cols=241  Identities=24%  Similarity=0.304  Sum_probs=204.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+... +++.+.....+  ..++.||++|+++++++++++.+.+++
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHHGG  287 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence            345 99999999999999999999999999999997532 22222222222  457899999999999999999999833


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+.....+.+.+.++|++++++|+.|++++++++.+.|.+++.++||++||.++..+.+++..|++||+++
T Consensus       288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal  367 (454)
T 3u0b_A          288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGM  367 (454)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHH
Confidence            49999999999988888999999999999999999999999999999887889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++|+++++.|++++||+||+|+||+++|++........     .+......|.++.++|+|+|++++||+|+.++++||+
T Consensus       368 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~  442 (454)
T 3u0b_A          368 IGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT-----REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGN  442 (454)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECSBCC---------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSC
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh-----HHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCc
Confidence            99999999999999999999999999999876543221     1222345688899999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      +|.+|||..+
T Consensus       443 ~i~vdGG~~l  452 (454)
T 3u0b_A          443 TIRVCGQAML  452 (454)
T ss_dssp             EEEESSSBSC
T ss_pred             EEEECCcccc
Confidence            9999999865

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-40  Score=302.58  Aligned_cols=239  Identities=29%  Similarity=0.405  Sum_probs=208.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++    ....++.+|++|+++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            34566 9999999999999999999999999999999988776665543    235567899999999998886    34


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       +++|+||||||.....++.+.+.++|++.+++|+.|++++++++.+.|.+++ .++||++||.++..+.++...|++||
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 1cyd_A           75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  153 (244)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence             7899999999988777788889999999999999999999999999998766 69999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      ++++.++++++.+++++||++++|+||++.|++........   .....+....|.+++.+|+|+|+++++++++.+.++
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST  230 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH---HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCH---HHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcc
Confidence            99999999999999988999999999999999865332222   233445566788999999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+|||+..
T Consensus       231 ~G~~~~v~gG~~~  243 (244)
T 1cyd_A          231 SGGGILVDAGYLA  243 (244)
T ss_dssp             CSSEEEESTTGGG
T ss_pred             cCCEEEECCCccC
Confidence            9999999999764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=306.01  Aligned_cols=230  Identities=30%  Similarity=0.404  Sum_probs=199.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||+||||++++++|+++|++|++++|+.+..+    ++   + ...++ +|+  .++++++++++     
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~-----   79 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV-----   79 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS-----
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh-----
Confidence            3455 9999999999999999999999999999999974332    22   3 56677 999  55677777654     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      .++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||++
T Consensus        80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  159 (249)
T 1o5i_A           80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMA  159 (249)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHH
Confidence            47999999999887778888899999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHH-HHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE-GLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++++++++.|++++||+||+|+||+++|++......     .... .+....|.+++++|+|+|++++||+++.+.+++
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~t  234 (249)
T 1o5i_A          160 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-----EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT  234 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch-----hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            9999999999999999999999999999998654321     1223 445567889999999999999999998889999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.+.+|||+...
T Consensus       235 G~~~~vdgG~~~~  247 (249)
T 1o5i_A          235 GQTIVVDGGLSKF  247 (249)
T ss_dssp             SCEEEESTTCCCC
T ss_pred             CCEEEECCCcccC
Confidence            9999999997653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.7e-41  Score=320.28  Aligned_cols=251  Identities=22%  Similarity=0.258  Sum_probs=201.0

Q ss_pred             CCCCCCCCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChh-----------HHHHHHHHHHhcCCc---EEEEE
Q 035642            3 SYVWWSNEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQT-----------ELNERLQEWKLKGLK---VTGSV   65 (367)
Q Consensus         3 ~~~~~~~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~-----------~~~~~~~~l~~~~~~---~~~~~   65 (367)
                      +|+.|++++ ++|||||  ++|||+++|++|+++|++|++++|+..           ++++. +++. .+..   ..++.
T Consensus         1 ~M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~   78 (315)
T 2o2s_A            1 SAFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLP-DGSLIEFAGVYP   78 (315)
T ss_dssp             ---CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCT-TSCBCCCSCEEE
T ss_pred             CCCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhh-cccccccccccc
Confidence            355666777 9999999  899999999999999999999998641           11111 1111 1111   23333


Q ss_pred             cc------------CC--------CHHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHH
Q 035642           66 CD------------LS--------SREQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESV  123 (367)
Q Consensus        66 ~D------------ls--------d~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~  123 (367)
                      +|            ++        |+++++++++++.+++ |++|+||||||+..  ..++.+.+.++|++++++|+.|+
T Consensus        79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~  157 (315)
T 2o2s_A           79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSF  157 (315)
T ss_dssp             CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHH
Confidence            33            33        3668999999999999 89999999999763  46778889999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccc
Q 035642          124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAI  201 (367)
Q Consensus       124 ~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~  201 (367)
                      ++++++++|+|++  .|+||++||.++..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++....
T Consensus       158 ~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~  235 (315)
T 2o2s_A          158 VSLLQHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI  235 (315)
T ss_dssp             HHHHHHHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHT
T ss_pred             HHHHHHHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhc
Confidence            9999999999965  3899999999999888887 58999999999999999999985 899999999999999986543


Q ss_pred             cCCh---hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          202 RHDP---AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       202 ~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ....   ......+.+....|.+|+++|+|+|++++||+|+.+.++||+.+.+|||+...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          236 GKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             TCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            2111   11122233445679999999999999999999999999999999999998764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-40  Score=306.65  Aligned_cols=246  Identities=27%  Similarity=0.388  Sum_probs=216.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      |++++ ++|||||+||||++++++|+++|++|++++| +.+++++..+++...+.++.++.+|++|+++++++++++.++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45666 9999999999999999999999999999999 778888888888776778999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~as  163 (367)
                      + +++|+||||||.....++.+.+.++|++++++|+.|+++++++++++|+ + +++||++||.++. .+.++...|++|
T Consensus        97 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~Y~~s  173 (274)
T 1ja9_A           97 F-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHALYAGS  173 (274)
T ss_dssp             H-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCchHHHH
Confidence            9 8999999999998777777889999999999999999999999999986 3 3899999999998 778888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |++++.+++.++.|++++||++++|+||++.|++......        .....+....+....|.+++++|+|+|+++++
T Consensus       174 K~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  253 (274)
T 1ja9_A          174 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSA  253 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence            9999999999999999889999999999999998652110        00002234445566788999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCc
Q 035642          236 LCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++++.+.+++|+.+.+|||+
T Consensus       254 l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          254 LCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCcccccccCcEEEecCCc
Confidence            99888888999999999996

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.5e-42  Score=323.96  Aligned_cols=252  Identities=22%  Similarity=0.237  Sum_probs=168.8

Q ss_pred             CCCCCCCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCCh-----------hHHH-----------HHHHHHHhcC
Q 035642            4 YVWWSNEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQ-----------TELN-----------ERLQEWKLKG   58 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~-----------~~~~-----------~~~~~l~~~~   58 (367)
                      |+.|++++ ++|||||  ++|||+++|++|+++|++|++++|+.           ++++           ++.+++...+
T Consensus         2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred             CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence            44556666 9999999  89999999999999999999998753           2222           1223332222


Q ss_pred             Cc---EEEEEcc------------CCC--------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHH
Q 035642           59 LK---VTGSVCD------------LSS--------REQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMS  113 (367)
Q Consensus        59 ~~---~~~~~~D------------lsd--------~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~  113 (367)
                      ..   ..++.+|            ++|        +++++++++++.+++ |++|+||||||+..  ..++.+.+.++|+
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~  160 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYL  160 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHH
Confidence            11   2333333            333        458999999999999 89999999999763  4677888999999


Q ss_pred             HhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecC
Q 035642          114 TLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPG  191 (367)
Q Consensus       114 ~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG  191 (367)
                      +++++|+.|+++++++++|+|++  .|+||++||.++..+.++. .+|++||+|+++|+++++.|+++ +||+||+|+||
T Consensus       161 ~~~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          161 AAVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            99999999999999999999965  3899999999999888887 69999999999999999999985 79999999999


Q ss_pred             cccCCccccccCChh---hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          192 VIRTSLSDAIRHDPA---KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       192 ~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++|++.........   .....+.+....|.+|+++|+|+|++++||+|+.+.++||+.|.+|||+...
T Consensus       239 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          239 PLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             CCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             CccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            999998754321100   0011122334578899999999999999999999999999999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-40  Score=298.09  Aligned_cols=232  Identities=22%  Similarity=0.307  Sum_probs=212.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++|||||+||||++++++|+++|+       +|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999       999999999988888888876677899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.++||++||.++..+.++...|++|
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           83 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence            98 89999999999987778888899999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+++++++++++.|++++||++++|+||++.|++........              ..++.+|+|+|+++++++++...+
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------~~~~~~~~dva~~~~~l~~~~~~~  227 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRT  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc--------------cccCCCHHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999876432110              125789999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ++|+.+..+||...
T Consensus       228 ~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          228 VVEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEEETTCCC
T ss_pred             cchheEEecccccc
Confidence            99999999998655

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=9.5e-41  Score=341.88  Aligned_cols=233  Identities=25%  Similarity=0.321  Sum_probs=203.0

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ---------TELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~---------~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      ..+++++ ++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...+.+.   .+|++|.+++
T Consensus         2 ~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            2 SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHH
Confidence            3456666 999999999999999999999999999998765         66777778887666554   2588888889


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      +++++++.+.| |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++..+.
T Consensus        79 ~~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~  157 (604)
T 2et6_A           79 DKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN  157 (604)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            99999999999 89999999999988788899999999999999999999999999999988878999999999999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++..+|++||+|+.+|+++++.|++++||+||+|+|| +.|+|...... ..   .    .      +..+|+|+|.+++
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~---~----~------~~~~pe~vA~~v~  222 (604)
T 2et6_A          158 FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PP---M----L------EKLGPEKVAPLVL  222 (604)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HH---H----H------TTCSHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hh---h----h------ccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998 68887543211 10   1    0      1258999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ||+|+. .++||+.+.+|||+..
T Consensus       223 ~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          223 YLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHhCCc-ccCCCCEEEECCCeEE
Confidence            999988 9999999999999764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.1e-40  Score=313.68  Aligned_cols=265  Identities=19%  Similarity=0.229  Sum_probs=205.2

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~--~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++++++ ++||||||||||+++|++|+++|++|++++|+.++++++.+++...+.  ++.++.+|++|+++++++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            345566 999999999999999999999999999999999999999888876555  89999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCcccccCCCC
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~~~~~~~~~  156 (367)
                      +.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.++      +.|+||++||.++..+.++
T Consensus        83 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           83 ARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HhC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            999 899999999999888888999999999999999999999999999999764      5799999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh-hHHH----HH-HhhcCCC-CCCCCHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-NKIV----EG-LVSRTPI-CRPGEPDEV  229 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~-~~~~----~~-~~~~~p~-~~~~~~~dv  229 (367)
                      ..+|++||+|+++|+++++.|++++||+|++|+||+|+|++.......... ....    .. .....+. ....+|+|+
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v  241 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI  241 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence            999999999999999999999999999999999999999987643222110 0000    00 0000111 112699999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCccccCCCCCCCCCcccchhhhhhhccccc
Q 035642          230 SSLVAFLCFPAASYITGQVICVDGGMTVNGFNPTCCPNAIDHLRLTIRLGMEGT  283 (367)
Q Consensus       230 A~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
                      |+.++.++...      +...+.     .+...+.++..++.+..+.| +.|+.
T Consensus       242 A~~~~~al~~~------~~~i~~-----~~~~~~~~~~~~~~~~~~~~-~~p~~  283 (319)
T 3ioy_A          242 GARVIEAMKAN------RLHIFS-----HPDHKEELREVFDEIIAEYQ-DYPKD  283 (319)
T ss_dssp             HHHHHHHHHTT------CSEECC-----CSTTHHHHHHHHHHHHHTCC-CCCCC
T ss_pred             HHHHHHHHHcC------CCEEEc-----CHHHHHHHHHHHHHHHHhhh-cCCCC
Confidence            99999988432      222221     22233444566666665555 44433

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=5.7e-40  Score=308.46  Aligned_cols=245  Identities=25%  Similarity=0.272  Sum_probs=199.5

Q ss_pred             CCCCCC-eEEEEcCC--ChhHHHHHHHHHHCCCEEEEEeCChhH-----------HHHHHHHHHhcCC---cEEEEEcc-
Q 035642            6 WWSNEQ-NYFITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTE-----------LNERLQEWKLKGL---KVTGSVCD-   67 (367)
Q Consensus         6 ~~~~~~-~vLVTGas--~GIG~aia~~L~~~G~~Vi~~~R~~~~-----------~~~~~~~l~~~~~---~~~~~~~D-   67 (367)
                      .|++++ ++|||||+  +|||+++|++|+++|++|++++|+...           +++. +++.. +.   ....+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence            355666 99999999  999999999999999999999876421           1111 11111 11   12333333 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHH
Q 035642           68 -------LS----S--------REQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHL  126 (367)
Q Consensus        68 -------ls----d--------~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l  126 (367)
                             ++    |        +++++++++++.+++ +++|+||||||+..  ..++.+.+.++|++++++|+.|++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence                   32    2        668999999999999 89999999999754  46777889999999999999999999


Q ss_pred             HHHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCccccccCC
Q 035642          127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIRHD  204 (367)
Q Consensus       127 ~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~~~  204 (367)
                      +++++|+|++  .|+||++||.++..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.....  
T Consensus       160 ~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~--  235 (297)
T 1d7o_A          160 LSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG--  235 (297)
T ss_dssp             HHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS--
T ss_pred             HHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc--
Confidence            9999999965  4899999999999888887 69999999999999999999985 7999999999999999875421  


Q ss_pred             hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          205 PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                       ...+....+....|.+++++|+|+|++++||+++.+.+++|+.+.+|||+...
T Consensus       236 -~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          236 -FIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             -HHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             -ccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence             11223344455679999999999999999999998999999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-40  Score=312.21  Aligned_cols=229  Identities=21%  Similarity=0.269  Sum_probs=196.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-G  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-C
Confidence            556 99999999999999999999999999999999999999999998878899999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++...|++||+|
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  187 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYG  187 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHH
Confidence            999999999998888888999999999999999999999999999998766 7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh-----hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-----NKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +++++++++.|++++||+||+|+||+++|++..........     ......+........+.+|+|+|++++.++.
T Consensus       188 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          188 VVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999987542110000     0000111111223356799999999999884

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.3e-39  Score=303.50  Aligned_cols=238  Identities=23%  Similarity=0.319  Sum_probs=202.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY-GRVD   81 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence            49999999999999999999999999999999998877766543   5679999999999999999999999999 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||++++++
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (281)
T 3m1a_A           82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQL  161 (281)
T ss_dssp             EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccC-----Chh---hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPA---KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~---~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +++++.|++++||+||+|+||++.|++......     ...   ............+.+++++|+|+|++++++++.+. 
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-  240 (281)
T 3m1a_A          162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK-  240 (281)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC-
Confidence            999999999999999999999999998653211     111   11112334455788899999999999999995432 


Q ss_pred             CccccEEEeCCCc
Q 035642          243 YITGQVICVDGGM  255 (367)
Q Consensus       243 ~itG~~i~vdgG~  255 (367)
                        .|.++++.++.
T Consensus       241 --~~~~~~l~s~~  251 (281)
T 3m1a_A          241 --TPLRLALGGDA  251 (281)
T ss_dssp             --CCSEEEESHHH
T ss_pred             --CCeEEecCchH
Confidence              46677776653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=5.7e-40  Score=297.16  Aligned_cols=224  Identities=16%  Similarity=0.165  Sum_probs=188.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++++++.+++   +.++.++.+|++++++++++++++.    ...|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~----~~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLD----SIPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCS----SCCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHh----hcCC
Confidence            37999999999999999999999999999999998888776665   5678889999999999999998764    2359


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +||||||.....++.+.+.++|++++++|+.|+++++++++|+|++++ ++||++||.++..+.++...|++||+|+++|
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999999998888888999999999999999999999999999997765 4999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC-CCCCCccccEE
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVI  249 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s-~~~~~itG~~i  249 (367)
                      +++++.|++++||+||+|+||++.|++.....             ...|.+++.+|+|+|++++++++ +.+.+++|+.+
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~  220 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSG-------------KSLDTSSFMSAEDAALMIHGALANIGNGYVSDITV  220 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEE
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcC-------------CCCCcccCCCHHHHHHHHHHHHhCcCCCCccceee
Confidence            99999999999999999999999999865432             22356788999999999999887 67889999999


Q ss_pred             EeCCCc
Q 035642          250 CVDGGM  255 (367)
Q Consensus       250 ~vdgG~  255 (367)
                      ..+...
T Consensus       221 ~~~~~~  226 (230)
T 3guy_A          221 NREGHH  226 (230)
T ss_dssp             EC----
T ss_pred             cCCCCC
Confidence            987654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.5e-40  Score=336.20  Aligned_cols=230  Identities=23%  Similarity=0.343  Sum_probs=198.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.  +++..+++...+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            35666 999999999999999999999999999998742  34556666666777888888884  45678888888888


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+++.+|++||+
T Consensus       394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence             8999999999998878889999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+.+|+++++.|++++||+||+|+||. .|+|.......              ......+|+|+|.+++||+|+++. +|
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~--------------~~~~~~~pe~vA~~v~~L~s~~~~-it  536 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE--------------QDKNLYHADQVAPLLVYLGTDDVP-VT  536 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------CCSSCGGGTHHHHHHTTSTTCC-CC
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch--------------hhccCCCHHHHHHHHHHHhCCccC-CC
Confidence            999999999999999999999999996 99986532111              012345899999999999999888 99


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.+.+|||+..
T Consensus       537 G~~~~vdGG~~~  548 (604)
T 2et6_A          537 GETFEIGGGWIG  548 (604)
T ss_dssp             SCEEEEETTEEE
T ss_pred             CcEEEECCCeeE
Confidence            999999999865

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=301.90  Aligned_cols=238  Identities=21%  Similarity=0.283  Sum_probs=197.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.+ ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   86 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR   86 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc-CC
Confidence            49999999999999999999999999999999998888777777542  4578899999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +|+||||||+..        .++|++.+++|+.|++.+++.++|+|++++   .|+||++||.++..+.++...|++||+
T Consensus        87 id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (267)
T 2gdz_A           87 LDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH  158 (267)
T ss_dssp             CCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHH
Confidence            999999999752        346889999999999999999999997653   689999999999999899999999999


Q ss_pred             HHHHHHHHH--HHHhCCCCeEEEEEecCcccCCccccccCChhhh---HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          166 AMNQLTKHL--ECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN---KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       166 al~~l~~~l--a~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++++++++  +.|+++.||+||+|+||+++|++...........   .....+....+..++++|+|+|++++||+++.
T Consensus       159 a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  238 (267)
T 2gdz_A          159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc
Confidence            999999995  6889899999999999999999865432111000   00111111122234679999999999999764


Q ss_pred             CCCccccEEEeCCCccccC
Q 035642          241 ASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~~  259 (367)
                        .++|+.+.+|||.....
T Consensus       239 --~~~G~~~~v~gg~~~~~  255 (267)
T 2gdz_A          239 --ALNGAIMKITTSKGIHF  255 (267)
T ss_dssp             --TCSSCEEEEETTTEEEE
T ss_pred             --CCCCcEEEecCCCcccc
Confidence              48999999999876543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=9.5e-40  Score=297.89  Aligned_cols=222  Identities=15%  Similarity=0.108  Sum_probs=195.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~   88 (367)
                      .+++|||||++|||++++++|+++|++|++++|+.++.+          ....++.+|++|+++++++++++.+.++ ++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            349999999999999999999999999999999976532          2356788999999999999999998873 48


Q ss_pred             ccEEEEcCCCCCCCCc-cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEA-LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~-~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|+||||||+....++ .+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.++...|++||+++
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~  154 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAV  154 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHH
Confidence            9999999998877676 67788999999999999999999999999965  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          168 NQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       168 ~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++++++++.|++  ++||+||+|+||+++|++........             ...+..+|+|+|+++++++++.+.+++
T Consensus       155 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------------~~~~~~~~~~vA~~v~~l~~~~~~~~~  221 (241)
T 1dhr_A          155 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRPNS  221 (241)
T ss_dssp             HHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS-------------CGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             HHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch-------------hhccCCCHHHHHHHHHHHhcCCCcCcc
Confidence            999999999998  88999999999999999865422111             112345789999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.+.+|||..
T Consensus       222 G~~~~v~g~~~  232 (241)
T 1dhr_A          222 GSLIQVVTTDG  232 (241)
T ss_dssp             TCEEEEEEETT
T ss_pred             ceEEEEeCCCC
Confidence            99999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-38  Score=296.04  Aligned_cols=240  Identities=23%  Similarity=0.316  Sum_probs=202.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.++++++.+++...+  .++.++.+|++|+++++++++++.+.+
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            455 99999999999999999999999999999999998888888877654  568889999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC--CEEEEecCcccc--cCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN--GIIVFISSVAGV--TAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~--g~IV~iSS~~~~--~~~~~~~~Y~  161 (367)
                       +++|+||||||+....++.+.+.++|++++++|+.+++++++.+++.|++.+.  |+||++||.++.  .+.++...|+
T Consensus       110 -g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 1xg5_A          110 -SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  188 (279)
T ss_dssp             -CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH
Confidence             89999999999987777888899999999999999999999999999987764  899999999987  5666778999


Q ss_pred             HHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          162 PYNGAMNQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       162 asKaal~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +||++++.+++.++.|++  +.||++|+|+||++.|++.........  ..   .....+..++.+|+|+|+++++++++
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~---~~~~~~~~~~~~~~dvA~~i~~l~~~  263 (279)
T 1xg5_A          189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EK---AAATYEQMKCLKPEDVAEAVIYVLST  263 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HH---HHHHHC---CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hH---HhhhcccccCCCHHHHHHHHHHHhcC
Confidence            999999999999999998  789999999999999998533222111  11   11223445788999999999999988


Q ss_pred             CCCCccccEEEeCCC
Q 035642          240 AASYITGQVICVDGG  254 (367)
Q Consensus       240 ~~~~itG~~i~vdgG  254 (367)
                      ...+.+|+...-++|
T Consensus       264 ~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          264 PAHIQIGDIQMRPTG  278 (279)
T ss_dssp             CTTEEEEEEEEEETT
T ss_pred             CcceEeeeEEEccCC
Confidence            777777765444433

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.4e-39  Score=306.53  Aligned_cols=232  Identities=23%  Similarity=0.358  Sum_probs=202.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEE---------eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTC---------SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~---------~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      |++++ ++|||||++|||+++|++|+++|++|+++         +|+.+++++..+++...+...   .+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence            56666 99999999999999999999999999996         457778888888887655443   479999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC
Q 035642           77 LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~  156 (367)
                      +++++.+.+ +++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|++++.|+||++||.++..+.++
T Consensus        82 ~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           82 LVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            999999998 8999999999998777788889999999999999999999999999998877899999999999988889


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ..+|++||+++++|+++++.|++++||+||+|+||++ |++...... ..   ..          +..+|+|+|.+++||
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~---~~----------~~~~p~dvA~~~~~l  225 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-ED---LV----------EALKPEYVAPLVLWL  225 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HH---HH----------HHSCGGGTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hh---hh----------ccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998 877543211 10   11          124899999999999


Q ss_pred             hCCCCCCccccEEEeCCCcccc
Q 035642          237 CFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++ ..+++|+.+.+|||+...
T Consensus       226 ~s~-~~~~tG~~~~v~GG~~~~  246 (319)
T 1gz6_A          226 CHE-SCEENGGLFEVGAGWIGK  246 (319)
T ss_dssp             TST-TCCCCSCEEEEETTEEEE
T ss_pred             hCc-hhhcCCCEEEECCCeEEE
Confidence            987 457899999999998753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.3e-39  Score=305.27  Aligned_cols=230  Identities=20%  Similarity=0.165  Sum_probs=186.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++    
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~----   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV----   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC----
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc----
Confidence            45666 9999999999999999999999999999999998887776655   568999999999999999998765    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC------------
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA------------  153 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~------------  153 (367)
                       +++|+||||||+..+  ..+.+.++|++++++|+.|+++++++++|+|.+    +||++||.++..+            
T Consensus        85 -~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~  157 (291)
T 3rd5_A           85 -SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSR  157 (291)
T ss_dssp             -CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred             -CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccccc
Confidence             689999999998753  245578889999999999999999999999854    8999999988765            


Q ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCC-HHHH
Q 035642          154 -APLTPLYGPYNGAMNQLTKHLECEQAKDN--IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGE-PDEV  229 (367)
Q Consensus       154 -~~~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~dv  229 (367)
                       .++..+|++||+|+++|+++++.|++++|  |+||+|+||++.|++.......      ........+.++... |+|+
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  231 (291)
T 3rd5_A          158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK------LGDALMSAATRVVATDADFG  231 (291)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------CHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH------HHHHHHHHHHHHHhCCHHHH
Confidence             23456899999999999999999998877  9999999999999998654221      111223356666665 9999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          230 SSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       230 A~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |++++||+++  ++++|+.+.+|||+...
T Consensus       232 A~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          232 ARQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HHHHHHHHcC--CCCCCceeCCcccccCc
Confidence            9999999976  48999999999998754

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3.1e-38  Score=286.12  Aligned_cols=224  Identities=23%  Similarity=0.267  Sum_probs=190.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++|||||+||||++++++|+++|++|++++|+.++++++.+++.    ++.++.+|++|+++++++++++.+.+ +++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-GEL   79 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            3589999999999999999999999999999999888777665542    57888999999999999999999998 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||.....++.+.+.++|++.+++|+.|++++++.+++.|++++.++||++||.++..+.++...|++||++++.
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLG  159 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHH
Confidence            99999999987777888899999999999999999999999999998888999999999999888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI  249 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i  249 (367)
                      ++++++.|++++||++|+|+||+++|++.....   .   .   +       .+.+|+|+|+++++++++.+.+++|+.+
T Consensus       160 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~---~---~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~  223 (234)
T 2ehd_A          160 LAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---G---Q---A-------WKLKPEDVAQAVLFALEMPGHAMVSEIE  223 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEECC--------------------------------CCHHHHHHHHHHHHHSCCSSCCCEEE
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---c---c---c-------CCCCHHHHHHHHHHHhCCCcccccceEE
Confidence            999999999999999999999999999764321   0   0   0       1369999999999999988899999877


Q ss_pred             EeCCC
Q 035642          250 CVDGG  254 (367)
Q Consensus       250 ~vdgG  254 (367)
                      ..+++
T Consensus       224 ~~~~~  228 (234)
T 2ehd_A          224 LRPTR  228 (234)
T ss_dssp             CCC--
T ss_pred             EeecC
Confidence            65553

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.2e-39  Score=311.40  Aligned_cols=237  Identities=14%  Similarity=0.033  Sum_probs=200.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCCEEEEEeCChhHH------------HHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTEL------------NERLQEWKLKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R~~~~~------------~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      ++||||||+|||+++|+.|++ +|++|++++|+.+..            +...+.+...+.++..+.+|++|++++++++
T Consensus        49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  128 (405)
T 3zu3_A           49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTI  128 (405)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            999999999999999999999 999999999876542            1234455556778999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHhHHHhhHHHH
Q 035642           79 ETVSSIFQGKLNLLVNNAAVA-------------VPKEA---------------------LDTTAEYMSTLRSTNFESVF  124 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~-------------~~~~~---------------------~~~~~e~~~~~~~vNv~g~~  124 (367)
                      +++.+.+ |++|+||||||..             ...++                     .+.+.++|++++++|..+.|
T Consensus       129 ~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~  207 (405)
T 3zu3_A          129 DAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDW  207 (405)
T ss_dssp             HHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHH
Confidence            9999999 9999999999974             22344                     67899999999999999998


Q ss_pred             -HHHHHHHH-HHHcCCCCEEEEecCcccccCCCCC--ccHHHHHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCCccc
Q 035642          125 -HLSKLAHP-LLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLECEQAKD-NIRANSIAPGVIRTSLSD  199 (367)
Q Consensus       125 -~l~~~~~~-~m~~~~~g~IV~iSS~~~~~~~~~~--~~Y~asKaal~~l~~~la~e~~~~-gIrvn~I~PG~v~t~~~~  199 (367)
                       .+++++.+ .|.+ ++|+||++||.++..+.+..  .+|++||+|+++++++++.|++++ |||||+|+||++.|++..
T Consensus       208 ~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~  286 (405)
T 3zu3_A          208 QMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASS  286 (405)
T ss_dssp             HHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHH
T ss_pred             HHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhh
Confidence             78887765 4544 46999999999999998887  999999999999999999999999 999999999999999877


Q ss_pred             cccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          200 AIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      .....+.   ....+.  .|++|.++|||+|+++.||+|+   ++.|+.+.+|++..++
T Consensus       287 ~ip~~p~---y~~~l~--~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          287 AIPMMPL---YLSLLF--KVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             TSTTHHH---HHHHHH--HHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             cCCCCcH---HHHHHH--HHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            6543221   222222  2688999999999999999965   7789998999988776

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.9e-39  Score=295.78  Aligned_cols=221  Identities=16%  Similarity=0.144  Sum_probs=196.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      |.+++|||||++|||+++|++|+++|++|++++|+.++.+            ...+.+|++|.++++++++++.+.+ ++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~-g~   87 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS-IK   87 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT-CC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc-CC
Confidence            3459999999999999999999999999999999976532            1356789999999999999999998 89


Q ss_pred             ccEEEEcCCCCCCCC-ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKE-ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~-~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      +|+||||||+..... +.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|++||+|+
T Consensus        88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  165 (251)
T 3orf_A           88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAAT  165 (251)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHH
Confidence            999999999876654 567789999999999999999999999999865  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC-CCCCc
Q 035642          168 NQLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP-AASYI  244 (367)
Q Consensus       168 ~~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~-~~~~i  244 (367)
                      +.++++++.|++  ++||+||+|+||+++|++.....             ...+.+++.+|+|+|+++++|+++ .+.++
T Consensus       166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~dva~~i~~l~~~~~~~~~  232 (251)
T 3orf_A          166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM-------------SDANFDDWTPLSEVAEKLFEWSTNSDSRPT  232 (251)
T ss_dssp             HHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC-------------TTSCGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc-------------ccccccccCCHHHHHHHHHHHhcCccccCC
Confidence            999999999987  88999999999999999764332             234567788999999999999998 88999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      +|+.+.+++|...
T Consensus       233 tG~~i~v~~g~~~  245 (251)
T 3orf_A          233 NGSLVKFETKSKV  245 (251)
T ss_dssp             TTCEEEEEEETTE
T ss_pred             cceEEEEecCCcc
Confidence            9999999887654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=7.6e-39  Score=293.95  Aligned_cols=233  Identities=20%  Similarity=0.238  Sum_probs=190.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCH-HHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSR-EQREKLMETVS   82 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~-~sv~~~~~~~~   82 (367)
                      ++++ +++||||+||||++++++|+++|++ |++++|+.+.  +..+++...  +.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            4555 9999999999999999999999996 9999998642  122223222  45788999999998 99999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCCCcc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      +.+ +++|+||||||+.        +.++|++++++|+.|+++++++++|+|.+++   .|+||++||.++..+.++...
T Consensus        80 ~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           80 DQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             Hhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            998 8999999999974        3456899999999999999999999997653   589999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+++++++++++.+++++||+||+|+||+++|++.....................|.   .+|+|+|++++++++ 
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dvA~~i~~~~~-  226 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT---QTSEQCGQNFVKAIE-  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC---EEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC---CCHHHHHHHHHHHHH-
Confidence            9999999999999999998878999999999999999875432110000112223333343   489999999999984 


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                        .+.+|+.+.+|||...
T Consensus       227 --~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          227 --ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             --HCCTTCEEEEETTEEE
T ss_pred             --cCCCCCEEEEeCCcee
Confidence              5789999999999744

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-39  Score=290.12  Aligned_cols=227  Identities=23%  Similarity=0.312  Sum_probs=198.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.+ .           .++.++.+|++|+++++++++++ +.+ +++|
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~d   68 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APLF   68 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCce
Confidence            58999999999999999999999999999999875 1           13478899999999999999999 777 8999


Q ss_pred             EEEEcCCCCCCCCccCC----CHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---C---CEEEEecCcccccCCCCCccH
Q 035642           91 LLVNNAAVAVPKEALDT----TAEYMSTLRSTNFESVFHLSKLAHPLLKASG---N---GIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~----~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~---g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      ++|||||.....++.+.    +.++|++++++|+.+++++++++.+.|.+++   .   |+||++||..+..+.++...|
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  148 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  148 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence            99999998766555543    4459999999999999999999999997654   3   499999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~~L~s~  239 (367)
                      ++||++++.++++++.|++++||++|+|+||+++|++.....  .   .....+....|. +++++|+|+|+++++++++
T Consensus       149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--E---KAKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--H---HHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc--h---hHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999875432  1   133445566788 8999999999999999965


Q ss_pred             CCCCccccEEEeCCCcccc
Q 035642          240 AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~~  258 (367)
                        ++++|+.+.+|||+.+.
T Consensus       224 --~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 --PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             --TTCCSCEEEESTTCCCC
T ss_pred             --CCCCCcEEEEcCCeecC
Confidence              78999999999998764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-39  Score=290.38  Aligned_cols=221  Identities=16%  Similarity=0.145  Sum_probs=193.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~iD   90 (367)
                      ++|||||+||||++++++|+++|++|++++|+.++.+          ....++.+|++|+++++++++++.+.++ +++|
T Consensus         5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            8999999999999999999999999999999976532          2356778999999999999999998873 4899


Q ss_pred             EEEEcCCCCCCCCc-cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEA-LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~-~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      +||||||+....++ .+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.++...|++||+++++
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  152 (236)
T 1ooe_A           75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  152 (236)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence            99999998876666 67788999999999999999999999999965  4899999999999999999999999999999


Q ss_pred             HHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH-HHhCCCCCCccc
Q 035642          170 LTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA-FLCFPAASYITG  246 (367)
Q Consensus       170 l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~-~L~s~~~~~itG  246 (367)
                      ++++++.|++  ++||+||+|+||+++|++.......             .+..+..+|+|+|++++ +++++++.+++|
T Consensus       153 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G  219 (236)
T 1ooe_A          153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN-------------ADHSSWTPLSFISEHLLKWTTETSSRPSSG  219 (236)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT-------------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred             HHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC-------------ccccccCCHHHHHHHHHHHHcCCCcccccc
Confidence            9999999998  8899999999999999986532111             11234568999999998 566888999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.+|||...
T Consensus       220 ~~~~v~gg~~~  230 (236)
T 1ooe_A          220 ALLKITTENGT  230 (236)
T ss_dssp             CEEEEEEETTE
T ss_pred             cEEEEecCCCc
Confidence            99999998654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.3e-38  Score=298.90  Aligned_cols=189  Identities=21%  Similarity=0.301  Sum_probs=168.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-----QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-----~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +++ ++||||||||||+++|++|+++|++|++++|+     .++++++.+.+...+.++.++.+|++|+++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            444 99999999999999999999999999988776     456666666666667889999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-CCCCccHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-APLTPLYG  161 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-~~~~~~Y~  161 (367)
                      +++ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+ .++...|+
T Consensus        83 ~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           83 GED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHH
Confidence            999 8999999999998888888999999999999999999999999999999888899999999998854 46678899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS  198 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~  198 (367)
                      +||+|+++++++++.|++++||+||+|+||++.|++.
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            9999999999999999999999999999999998764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=7.4e-39  Score=328.85  Aligned_cols=234  Identities=22%  Similarity=0.310  Sum_probs=190.4

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSR---------NQTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R---------~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      ..+++++ ++|||||++|||+++|++|+++|++|++++|         +.+++++..+++...+..+   .+|++|.+++
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~   89 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDG   89 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHH
Confidence            3456777 9999999999999999999999999999988         7777888888887766554   3799999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      +++++++.+.+ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.
T Consensus        90 ~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           90 AKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             HHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            99999999999 89999999999988888889999999999999999999999999999999888999999999999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++..+|++||+|+++|+++++.|++++||+||+|+||++ |++........    .          .+..+|+|+|.+++
T Consensus       169 ~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~----~----------~~~~~pedvA~~v~  233 (613)
T 3oml_A          169 FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI----L----------FNELKPKLIAPVVA  233 (613)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH----H----------HTTCCGGGTHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh----h----------hhcCCHHHHHHHHH
Confidence            999999999999999999999999999999999999975 56554332110    1          12348999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ||+|+. .++||+.+.+|||++..
T Consensus       234 ~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          234 YLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             HTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HhcCCC-cCCCceEEEECCCeEEE
Confidence            999988 89999999999998865

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.3e-39  Score=315.73  Aligned_cols=246  Identities=17%  Similarity=0.076  Sum_probs=200.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCEEEEEeCChhHHH------------HHHHHHHhcCCcEEEEEccCCCHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELN------------ERLQEWKLKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R~~~~~~------------~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      +++||||||+|||+++|+.|++ +|++|++++|+.+.++            ...+.+...+.++..+.+|++|+++++++
T Consensus        62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~  141 (422)
T 3s8m_A           62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV  141 (422)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            4999999999999999999999 9999999999865432            23355566688899999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHhHHHhhHHH
Q 035642           78 METVSSIFQGKLNLLVNNAAVA-------------VPKEA---------------------LDTTAEYMSTLRSTNFESV  123 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag~~-------------~~~~~---------------------~~~~~e~~~~~~~vNv~g~  123 (367)
                      ++++.++++|++|+||||||..             ...++                     .+.+.++|++++++|..+.
T Consensus       142 v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~  221 (422)
T 3s8m_A          142 IELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQD  221 (422)
T ss_dssp             HHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhH
Confidence            9999999856899999999972             22333                     3579999999999999998


Q ss_pred             H-HHHHHHHHHHHcCCCCEEEEecCcccccCCCCC--ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccc
Q 035642          124 F-HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDA  200 (367)
Q Consensus       124 ~-~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~  200 (367)
                      | .+++++.+.+...++|+||++||.++..+.+..  .+|++||+|+.+|+++++.|++++|||||+|+||++.|++...
T Consensus       222 ~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~  301 (422)
T 3s8m_A          222 WELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAA  301 (422)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhc
Confidence            7 788887654323346899999999999887765  8999999999999999999999999999999999999999876


Q ss_pred             ccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc-ccEEEeCCCccccCCCC
Q 035642          201 IRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT-GQVICVDGGMTVNGFNP  262 (367)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it-G~~i~vdgG~~~~~~~~  262 (367)
                      ....+   ......  ..|++|.++|||+|+++.||+|+.- |.+ |+...+|++..++-..-
T Consensus       302 ip~~~---~~~~~~--~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~  358 (422)
T 3s8m_A          302 IPVMP---LYISMV--YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDW  358 (422)
T ss_dssp             STHHH---HHHHHH--HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTT
T ss_pred             CCCCh---HHHHHH--HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchh
Confidence            53221   112211  2378899999999999999998643 554 77666899887764433

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-38  Score=285.65  Aligned_cols=221  Identities=21%  Similarity=0.237  Sum_probs=189.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-   87 (367)
                      +++|||||+||||++++++|+++|  ++|++++|+.++++++.+.   .+.++.++.+|++|+++++++++++.+.+ + 
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV-GS   79 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH-GG
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc-CC
Confidence            489999999999999999999999  9999999998877654322   35689999999999999999999999988 7 


Q ss_pred             -CccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------C-----CCEEEEecCcccccCC
Q 035642           88 -KLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------G-----NGIIVFISSVAGVTAA  154 (367)
Q Consensus        88 -~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~-----~g~IV~iSS~~~~~~~  154 (367)
                       ++|+||||||... ..++.+.+.++|++++++|+.|+++++++++++|+++      +     .++||++||..+..+.
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999999887 6677788999999999999999999999999999765      5     7999999999988776


Q ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHH
Q 035642          155 -------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPD  227 (367)
Q Consensus       155 -------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  227 (367)
                             ++..+|++||++++.++++++.+++++||++++|+||+++|++...                    ..+.+|+
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~~~~  219 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------NAALTVE  219 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------H
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------CCCCCHH
Confidence                   5678999999999999999999999889999999999999998542                    1245899


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      |+|+.+++++++...+++|+.+.+|||.
T Consensus       220 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          220 QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            9999999999888888999999999985

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=5.8e-39  Score=294.78  Aligned_cols=220  Identities=26%  Similarity=0.325  Sum_probs=176.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++++.          .   +.+|++|+++++++++++   + +++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~-~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---S-KGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---C-CCCC
Confidence            479999999999999999999999999999998764321          1   568999999999988754   3 6899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-------------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-------------------  151 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-------------------  151 (367)
                      +||||||+....       +.|++++++|+.|+++++++++|+|++++.|+||++||.++.                   
T Consensus        65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999986421       128899999999999999999999988878999999999988                   


Q ss_pred             ---------cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh--cCCC
Q 035642          152 ---------TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS--RTPI  220 (367)
Q Consensus       152 ---------~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~p~  220 (367)
                               .+.++...|++||++++.++++++.|++++||+||+|+||++.|++........    .......  ..|.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~  213 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP----RYGESIAKFVPPM  213 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------CCCST
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch----hHHHHHHhccccc
Confidence                     334466789999999999999999999988999999999999999876431111    1111112  4678


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++.+|+|+|+++++++++++.+++|+.+.+|||+...
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            89999999999999999988889999999999998653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-37  Score=286.71  Aligned_cols=219  Identities=25%  Similarity=0.271  Sum_probs=195.5

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+++++ ++|||||+||||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            355666 9999999999999999999999999999999999888888888777778999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.++||++||.++..+.++...|++||
T Consensus       106 ~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          106 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             C-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            8 899999999999877777778899999999999999999999999999888889999999999988877888999999


Q ss_pred             HHHHHHHHHHHHHhC---CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          165 GAMNQLTKHLECEQA---KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       165 aal~~l~~~la~e~~---~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++++.++++++.|++   +.||+||+|+||+++|++...     .   .       .+.+++.+|+|+|+++++++...
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----~---~-------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----P---S-------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----T---H-------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----c---c-------ccccCCCCHHHHHHHHHHHHHcC
Confidence            999999999999996   679999999999999998531     0   0       12356789999999999998543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-36  Score=285.20  Aligned_cols=217  Identities=25%  Similarity=0.345  Sum_probs=186.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCH-HHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSR-EQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~-~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+ ++++++++.+.+.+
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            444 99999999999999999999999999999999999999888887654 5799999999998 99999999999998


Q ss_pred             CCCccEEEEcCCCCCC------------------------------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVP------------------------------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK  135 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~------------------------------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~  135 (367)
                       +++|+||||||+...                              .++.+.+.+.+++++++|+.|+++++++++|+|+
T Consensus        90 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           90 -GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             -SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             -CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence             899999999998743                              1345668899999999999999999999999998


Q ss_pred             cCCCCEEEEecCcccccCC-------------------------------------------CCCccHHHHHHHHHHHHH
Q 035642          136 ASGNGIIVFISSVAGVTAA-------------------------------------------PLTPLYGPYNGAMNQLTK  172 (367)
Q Consensus       136 ~~~~g~IV~iSS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~  172 (367)
                      +++.|+||++||.++..+.                                           ++..+|++||+|++++++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            8888999999999887643                                           355789999999999999


Q ss_pred             HHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 035642          173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV  248 (367)
Q Consensus       173 ~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~  248 (367)
                      +++.++++  |+||+|+||+|.|++.....                    ..++++.|+.+++++.......+|..
T Consensus       249 ~la~e~~~--i~v~~v~PG~v~T~~~~~~~--------------------~~~~~~~a~~~~~~~~~~~~~~~g~~  302 (311)
T 3o26_A          249 VLANKIPK--FQVNCVCPGLVKTEMNYGIG--------------------NYTAEEGAEHVVRIALFPDDGPSGFF  302 (311)
T ss_dssp             HHHHHCTT--SEEEEECCCSBCSGGGTTCC--------------------SBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred             HHHhhcCC--ceEEEecCCceecCCcCCCC--------------------CCCHHHHHHHHHHHHhCCCCCCCceE
Confidence            99999864  99999999999999865431                    13789999999998865444444443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=280.65  Aligned_cols=226  Identities=22%  Similarity=0.277  Sum_probs=198.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFG---AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G---~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++++ ++|||||+||||++++++|+++|   ++|++++|+.++.+.+ +++...+.++.++.+|++|+++++++++++.+
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            4555 99999999999999999999999   9999999998766543 34444466899999999999999999999999


Q ss_pred             HcCC--CccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------C-----CCEEEEecCcc
Q 035642           84 IFQG--KLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------G-----NGIIVFISSVA  149 (367)
Q Consensus        84 ~~~g--~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~-----~g~IV~iSS~~  149 (367)
                      .+ +  ++|+||||||+.. ..++.+.+.+++++++++|+.++++++++++++|.++      +     .++||++||.+
T Consensus        97 ~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           97 VT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             hc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence            88 6  7999999999887 6677888999999999999999999999999999765      3     58999999999


Q ss_pred             cccCCC---CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCH
Q 035642          150 GVTAAP---LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP  226 (367)
Q Consensus       150 ~~~~~~---~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  226 (367)
                      +..+.+   +...|++||++++.+++.++.+++++||++++|+||+++|++...                    ....+|
T Consensus       176 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~~~  235 (267)
T 1sny_A          176 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------SAPLDV  235 (267)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------TCSBCH
T ss_pred             ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------CCCCCH
Confidence            887653   677899999999999999999999999999999999999998632                    124589


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      +++|+.++++++.....++|+.+.+|||.
T Consensus       236 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          236 PTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999999877888999999999985

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.4e-38  Score=285.57  Aligned_cols=223  Identities=23%  Similarity=0.256  Sum_probs=160.1

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|++ |++|++++|+.+++++..+     ..++.++.+|+++.++ .+.+.+..+.+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~-   73 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL-   73 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC-
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc-
Confidence            4555 999999999999999999988 9999999999887765543     2368889999999877 44444555566 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+|
T Consensus        74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  152 (245)
T 3e9n_A           74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHA  152 (245)
T ss_dssp             SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHH
Confidence            7999999999998888888889999999999999999999999999997764 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++|+++++.|++++||+||+|+||++.|++........         ....+.+++.+|+|+|++++|+++...   +|
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~---~~  220 (245)
T 3e9n_A          153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGE---TT  220 (245)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCGGGSCHHHHHHHHHHHHTSCT---TE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh---------hcccccccCCCHHHHHHHHHHHHcCCC---cc
Confidence            999999999999999999999999999999876543221         123456778899999999999996433   34


Q ss_pred             cEEEe
Q 035642          247 QVICV  251 (367)
Q Consensus       247 ~~i~v  251 (367)
                      +.+.+
T Consensus       221 ~~~~i  225 (245)
T 3e9n_A          221 QITNV  225 (245)
T ss_dssp             EEEEE
T ss_pred             ceeee
Confidence            44444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.9e-37  Score=295.49  Aligned_cols=235  Identities=17%  Similarity=0.219  Sum_probs=184.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh------cCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL------KGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~------~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++|||||++|||++++++|+++|++|++++|+.++++...+.+..      .+.++.++.+|++|+++++++++++.  
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--
Confidence            3899999999999999999999999988888765443333332221      24678999999999999999999873  


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus        81 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK  159 (327)
T 1jtv_A           81 E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK  159 (327)
T ss_dssp             T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHH
Confidence            4 789999999998877788888999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh---------hhHHHHHHhh--cCCCCCC-CCHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA---------KNKIVEGLVS--RTPICRP-GEPDEVSSL  232 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~---------~~~~~~~~~~--~~p~~~~-~~~~dvA~a  232 (367)
                      +++++|+++++.|++++||+||+|+||+++|++.........         ..........  ..+.+++ .+|+|+|++
T Consensus       160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~  239 (327)
T 1jtv_A          160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (327)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Confidence            999999999999999999999999999999999765322110         0001111110  0122343 489999999


Q ss_pred             HHHHhCC---CCCCccccE
Q 035642          233 VAFLCFP---AASYITGQV  248 (367)
Q Consensus       233 i~~L~s~---~~~~itG~~  248 (367)
                      ++++++.   ..++++|+.
T Consensus       240 i~~l~~~~~~~~~~~tg~~  258 (327)
T 1jtv_A          240 FLTALRAPKPTLRYFTTER  258 (327)
T ss_dssp             HHHHHHCSSCCSEEESCST
T ss_pred             HHHHHcCCCCCeEEEeCch
Confidence            9999864   345666654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=6.3e-36  Score=276.21  Aligned_cols=219  Identities=25%  Similarity=0.334  Sum_probs=189.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||++++++|++ +|++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i   83 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   83 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            4999999999999999999999 99999999999998888888887767788999999999999999999999998 899


Q ss_pred             cEEEEcCCCCCCCCccCCC-HHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--------------
Q 035642           90 NLLVNNAAVAVPKEALDTT-AEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--------------  154 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~-~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--------------  154 (367)
                      |+||||||....... +.+ .+++++++++|+.|+++++++++++|++  .|+||++||.++..+.              
T Consensus        84 d~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           84 DVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhcccc
Confidence            999999998754432 334 5899999999999999999999999865  4899999998776320              


Q ss_pred             ---------------------------CCCccHHHHHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCCccccccC
Q 035642          155 ---------------------------PLTPLYGPYNGAMNQLTKHLECEQAK----DNIRANSIAPGVIRTSLSDAIRH  203 (367)
Q Consensus       155 ---------------------------~~~~~Y~asKaal~~l~~~la~e~~~----~gIrvn~I~PG~v~t~~~~~~~~  203 (367)
                                                 .....|++||++++.+++.++.++++    .||+||+|+||++.|++...   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence                                       12378999999999999999999977    79999999999999998642   


Q ss_pred             ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 035642          204 DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA--ASYITGQVICVDGG  254 (367)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~--~~~itG~~i~vdgG  254 (367)
                                       .++.+|+|+|+++++|++..  ..+++|+.+. +++
T Consensus       238 -----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 -----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             -----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                             23569999999999999744  3689999887 554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=8.8e-37  Score=297.85  Aligned_cols=242  Identities=16%  Similarity=0.064  Sum_probs=200.1

Q ss_pred             CeEEEEcCCChhHHH--HHHHHHHCCCEEEEEeCChhH------------HHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Q 035642           11 QNYFITGGTRGIGHA--IVEELAGFGAIIHTCSRNQTE------------LNERLQEWKLKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus        11 ~~vLVTGas~GIG~a--ia~~L~~~G~~Vi~~~R~~~~------------~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      +++||||||+|||++  +++.|+++|++|++++|+.+.            .+.+.+.....+.++.++.+|++|++++++
T Consensus        61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~  140 (418)
T 4eue_A           61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDK  140 (418)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHH
Confidence            399999999999999  999999999999999997543            244444555567789999999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHhHHHhhHH
Q 035642           77 LMETVSSIFQGKLNLLVNNAAVA-------------VPKEA---------------------LDTTAEYMSTLRSTNFES  122 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag~~-------------~~~~~---------------------~~~~~e~~~~~~~vNv~g  122 (367)
                      +++++.+.+ |++|+||||||..             ...++                     .+.+.++|++++++|..+
T Consensus       141 ~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~  219 (418)
T 4eue_A          141 VIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE  219 (418)
T ss_dssp             HHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence            999999999 8999999999974             22333                     356899999999999998


Q ss_pred             HH-HHHHHHHHHHHcCCCCEEEEecCcccccCCCCC--ccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCcc
Q 035642          123 VF-HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT--PLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLS  198 (367)
Q Consensus       123 ~~-~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~  198 (367)
                      .+ .+++++.+.+...++|+||++||.++..+.+.+  .+|++||+|+++|+++|+.|+++ +|||||+|+||++.|++.
T Consensus       220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s  299 (418)
T 4eue_A          220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKAS  299 (418)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred             HHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhh
Confidence            88 777777765433446999999999999998888  99999999999999999999999 999999999999999988


Q ss_pred             ccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCC
Q 035642          199 DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~  260 (367)
                      ......+.   ....+.  .++++.+++||+++++.+|+++  ...+|+.+.+|||..++-.
T Consensus       300 ~~ip~~p~---y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d  354 (418)
T 4eue_A          300 AYIPTFPL---YAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMD  354 (418)
T ss_dssp             HTSTTHHH---HHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESC
T ss_pred             hcCCCCcH---HHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCC
Confidence            76543221   111111  2466778999999999999965  6678999999998777633

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.5e-34  Score=268.50  Aligned_cols=214  Identities=21%  Similarity=0.248  Sum_probs=185.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ ++|||||+||||++++++|+++|++|++++|+.+++++..+++...+. ++.++.+|++|+++++++++++.+.+ 
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            455 999999999999999999999999999999999998888877765554 78899999999999999999999998 


Q ss_pred             CCccEEEEc-CCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNN-AAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~-Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+|||| ||... .++.+.+.+++++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus       105 g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  182 (286)
T 1xu9_A          105 GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKF  182 (286)
T ss_dssp             TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHH
Confidence            899999999 56543 345566899999999999999999999999998764 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh--CCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          166 AMNQLTKHLECEQ--AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       166 al~~l~~~la~e~--~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++++++++.|+  ...||++++|+||+++|++........             ......+|+|+|+.++..+.
T Consensus       183 a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~~~vA~~i~~~~~  244 (286)
T 1xu9_A          183 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI-------------VHMQAAPKEECALEIIKGGA  244 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG-------------GGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc-------------ccCCCCCHHHHHHHHHHHHh
Confidence            9999999999999  577999999999999999764321100             01134689999999999874

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.4e-34  Score=318.80  Aligned_cols=240  Identities=19%  Similarity=0.201  Sum_probs=200.6

Q ss_pred             CCCCC-eEEEEcCCCh-hHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRG-IGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKL----KGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         7 ~~~~~-~vLVTGas~G-IG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~----~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |++++ ++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++..    .+.++.++.||++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            45666 9999999998 9999999999999999998 6887777766666532    26689999999999999999999


Q ss_pred             HHHHH-----cCC-CccEEEEcCCCCCCC-CccCCC--HHHHHHhHHHhhHHHHHHHHHH--HHHHHcCCCCEEEEecCc
Q 035642           80 TVSSI-----FQG-KLNLLVNNAAVAVPK-EALDTT--AEYMSTLRSTNFESVFHLSKLA--HPLLKASGNGIIVFISSV  148 (367)
Q Consensus        80 ~~~~~-----~~g-~iD~lI~~Ag~~~~~-~~~~~~--~e~~~~~~~vNv~g~~~l~~~~--~~~m~~~~~g~IV~iSS~  148 (367)
                      ++.+.     + | ++|+||||||+.... ++.+.+  .+.|++++++|+.|++++++++  .|.|.+++.|+||++||.
T Consensus       751 ~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            99988     5 5 899999999998776 788888  8999999999999999999988  688877767899999999


Q ss_pred             ccccCCCCCccHHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCCH
Q 035642          149 AGVTAAPLTPLYGPYNGAMNQL-TKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEP  226 (367)
Q Consensus       149 ~~~~~~~~~~~Y~asKaal~~l-~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  226 (367)
                      ++..+  +..+|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|....   ...    .......|. +..+|
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~---~~~----~~~~~~~pl-r~~sP  898 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NII----AEGIEKMGV-RTFSQ  898 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C---CTT----HHHHHTTSC-CCEEH
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc---hhH----HHHHHhcCC-CCCCH
Confidence            99877  678999999999999 99999999887 999999999999 7876531   111    112233454 66799


Q ss_pred             HHHHHHHHHHhCCC-CCCccccEEEeC--CCcccc
Q 035642          227 DEVSSLVAFLCFPA-ASYITGQVICVD--GGMTVN  258 (367)
Q Consensus       227 ~dvA~ai~~L~s~~-~~~itG~~i~vd--gG~~~~  258 (367)
                      +|+|++++||+++. +.+++|+.+.+|  ||+...
T Consensus       899 EEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          899 KEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            99999999999987 689999999875  997654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=2.6e-34  Score=262.50  Aligned_cols=220  Identities=29%  Similarity=0.348  Sum_probs=182.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||++++++|+++|++|++++|+.++.+.             .+.+|++++++++++++++   . +++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence            379999999999999999999999999999998754321             1567999999999988765   2 6899


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------------  154 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------------  154 (367)
                      +||||||....       .+.++..+++|+.|++++++++.+.|++.+.++||++||.++..+.                
T Consensus        65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99999997642       1237889999999999999999999988778999999999887654                


Q ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC--CCCC
Q 035642          155 ----------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT--PICR  222 (367)
Q Consensus       155 ----------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--p~~~  222 (367)
                                ++...|++||++++.+++.++.+++++|+++++++||++.|++...........    ......  |.++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~  213 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG----ESTRRFVAPLGR  213 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH----HHHHSCCCTTSS
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH----HHHHHHHHHhcC
Confidence                      456789999999999999999999888999999999999999865431111111    111222  7788


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +.+++|+|+++++++++.+.+++|+.+.+|||....
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            999999999999999877778999999999998765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.7e-33  Score=309.58  Aligned_cols=240  Identities=20%  Similarity=0.203  Sum_probs=200.2

Q ss_pred             CCCCC-eEEEEcCCCh-hHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH----hcCCcEEEEEccCCCHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRG-IGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWK----LKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         7 ~~~~~-~vLVTGas~G-IG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~----~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |++++ ++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.    ..+.++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            45666 9999999999 99999999999999999985 66666665555442    236689999999999999999999


Q ss_pred             HHHHH---cCC-CccEEEEcCCCCCCC-CccCCC--HHHHHHhHHHhhHHHHHHHHH--HHHHHHcCCCCEEEEecCccc
Q 035642           80 TVSSI---FQG-KLNLLVNNAAVAVPK-EALDTT--AEYMSTLRSTNFESVFHLSKL--AHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        80 ~~~~~---~~g-~iD~lI~~Ag~~~~~-~~~~~~--~e~~~~~~~vNv~g~~~l~~~--~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++.+.   + | ++|+||||||+.... ++.+.+  .+.|++++++|+.|++++++.  +++.|.+++.|+||++||.++
T Consensus       728 ~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          728 YIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            99988   8 7 899999999998776 788888  899999999999999999987  678887766789999999999


Q ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHH-hCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCCHHH
Q 035642          151 VTAAPLTPLYGPYNGAMNQLTKHLECE-QAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDE  228 (367)
Q Consensus       151 ~~~~~~~~~Y~asKaal~~l~~~la~e-~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  228 (367)
                      ..+  +..+|++||+|+++|++.++.+ +++. |+||+|+||++. |+|....    .   .........|. +..+|+|
T Consensus       807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~---~~~~~~~~~pl-r~~sPeE  875 (1878)
T 2uv9_A          807 TFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----N---LVAEGVEKLGV-RTFSQQE  875 (1878)
T ss_dssp             SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----H---HTHHHHHTTTC-CCBCHHH
T ss_pred             ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----h---hhHHHHHhcCC-CCCCHHH
Confidence            877  5779999999999999876554 7765 999999999999 9986431    1   11222233454 5569999


Q ss_pred             HHHHHHHHhCCCC-CCccccEEEe--CCCcccc
Q 035642          229 VSSLVAFLCFPAA-SYITGQVICV--DGGMTVN  258 (367)
Q Consensus       229 vA~ai~~L~s~~~-~~itG~~i~v--dgG~~~~  258 (367)
                      +|++++||+++.+ .++||+.+.+  |||+...
T Consensus       876 VA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          876 MAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            9999999999876 8999999987  5998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-35  Score=314.40  Aligned_cols=241  Identities=19%  Similarity=0.204  Sum_probs=202.4

Q ss_pred             CCCCCC-eEEEEcCCCh-hHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRG-IGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKL----KGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~G-IG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~----~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      .|++++ ++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++..    .+.++.++.+|++|++++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            355666 9999999998 9999999999999999998 6777776666666532    2567899999999999999999


Q ss_pred             HHHHHH-----cCC-CccEEEEcCCCCCCC-CccCCC--HHHHHHhHHHhhHHHHHHHHHH--HHHHHcCCCCEEEEecC
Q 035642           79 ETVSSI-----FQG-KLNLLVNNAAVAVPK-EALDTT--AEYMSTLRSTNFESVFHLSKLA--HPLLKASGNGIIVFISS  147 (367)
Q Consensus        79 ~~~~~~-----~~g-~iD~lI~~Ag~~~~~-~~~~~~--~e~~~~~~~vNv~g~~~l~~~~--~~~m~~~~~g~IV~iSS  147 (367)
                      +++.+.     + | ++|+||||||+.... ++.+.+  .++|++++++|+.|++++++++  .|.|++++.|+||++||
T Consensus       551 e~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          551 EFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence            999988     6 6 899999999998776 788888  8999999999999999999998  78887776789999999


Q ss_pred             cccccCCCCCccHHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCC
Q 035642          148 VAGVTAAPLTPLYGPYNGAMNQL-TKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGE  225 (367)
Q Consensus       148 ~~~~~~~~~~~~Y~asKaal~~l-~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  225 (367)
                      .++..+  +..+|++||+|+++| ++.++.++++. |+||+|+||+++ |++......       ........|. +..+
T Consensus       630 iAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~-------~~~~l~~ipl-R~~s  698 (1688)
T 2pff_A          630 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-------IAEGIEKMGV-RTFS  698 (1688)
T ss_dssp             CTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTT-------CSTTTSSSSC-CCCC
T ss_pred             hHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchH-------HHHHHHhCCC-CCCC
Confidence            998877  678999999999999 78888888886 999999999999 787643110       0111223444 5669


Q ss_pred             HHHHHHHHHHHhCCC-CCCccccEEEeC--CCcccc
Q 035642          226 PDEVSSLVAFLCFPA-ASYITGQVICVD--GGMTVN  258 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~-~~~itG~~i~vd--gG~~~~  258 (367)
                      |+|+|++++||+|+. +.+++|+.+.+|  ||+...
T Consensus       699 PEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          699 QKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            999999999999988 689999999876  998764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.3e-33  Score=248.18  Aligned_cols=198  Identities=20%  Similarity=0.207  Sum_probs=176.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+||||++++++|+ +|++|++++|+.+                 .+.+|++|+++++++++++     +++|+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~~d~   61 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GKVDA   61 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CCCCE
Confidence            69999999999999999999 9999999999864                 4678999999999998765     78999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      ||||||.....++.+.+.++|++.+++|+.+++++++++.+.|++  +++||++||..+..+.++...|++||++++.++
T Consensus        62 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~  139 (202)
T 3d7l_A           62 IVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFA  139 (202)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHH
Confidence            999999887777888899999999999999999999999998854  389999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                      +.++.|+ ++||++++|+||++.|++...              ....+..++.+++|+|+++++++   ..+.+|+.+++
T Consensus       140 ~~~~~e~-~~gi~v~~v~pg~v~~~~~~~--------------~~~~~~~~~~~~~dva~~~~~~~---~~~~~G~~~~v  201 (202)
T 3d7l_A          140 KSAAIEM-PRGIRINTVSPNVLEESWDKL--------------EPFFEGFLPVPAAKVARAFEKSV---FGAQTGESYQV  201 (202)
T ss_dssp             HHHTTSC-STTCEEEEEEECCBGGGHHHH--------------GGGSTTCCCBCHHHHHHHHHHHH---HSCCCSCEEEE
T ss_pred             HHHHHHc-cCCeEEEEEecCccCCchhhh--------------hhhccccCCCCHHHHHHHHHHhh---hccccCceEec
Confidence            9999998 779999999999999986421              12345567889999999999888   35689999998


Q ss_pred             C
Q 035642          252 D  252 (367)
Q Consensus       252 d  252 (367)
                      |
T Consensus       202 d  202 (202)
T 3d7l_A          202 Y  202 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.3e-32  Score=244.05  Aligned_cols=199  Identities=20%  Similarity=0.221  Sum_probs=172.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+||||++++++|+++  +|++++|+.+++++..+++.   .  .++.+|++|++++++++++    + +++|+
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~-~~id~   69 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----A-GPLDL   69 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----H-CSEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----c-CCCCE
Confidence            6999999999999999999998  99999999988877766653   2  7888999999999999887    4 79999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLT  171 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~  171 (367)
                      ||||||.....++.+.+.++|++.+++|+.|++++++++    ++++.++||++||..+..+.++...|++||++++.++
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  145 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYL  145 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHH
Confidence            999999987777778889999999999999999999988    3445689999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          172 KHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       172 ~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +.++.+++++||++++++||++.|++...               ...+.+++.+|+|+|++++++++...
T Consensus       146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~~---------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          146 EAARKELLREGVHLVLVRLPAVATGLWAP---------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCBCSGGGGG---------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHhhhCCEEEEEecCcccCCCccc---------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999997321               12355788999999999999996543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=3.3e-31  Score=267.02  Aligned_cols=218  Identities=20%  Similarity=0.195  Sum_probs=182.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCE-EEEE-eCC-------------hhHHHHHHHHHHhcCCcEEEEEccCCCH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAI-IHTC-SRN-------------QTELNERLQEWKLKGLKVTGSVCDLSSR   71 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~-~R~-------------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~   71 (367)
                      ++..+++|||||+||||+++|++|+++|++ |+++ +|+             .++++++.+++...+.++.++.||++|+
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            455569999999999999999999999996 7777 898             3556677778877788999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCccc
Q 035642           72 EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAG  150 (367)
Q Consensus        72 ~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~  150 (367)
                      ++++++++++. .+ +++|+||||||+.....+.+.+.++|++++++|+.|++++.+++.+.+++++ .++||++||.++
T Consensus       328 ~~v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          328 EAAARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            99999999988 67 8999999999999888899999999999999999999999999999987766 799999999999


Q ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHH
Q 035642          151 VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS  230 (367)
Q Consensus       151 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  230 (367)
                      ..+.+++..|++||+++++|+    .+++.+|+++++|+||+++|+|....    .   ....+.. . .....+|++++
T Consensus       406 ~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~---~~~~~~~-~-g~~~l~pee~a  472 (525)
T 3qp9_A          406 IWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----A---TGERLRR-L-GLRPLAPATAL  472 (525)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----H---HHHHHHH-T-TBCCBCHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----h---hHHHHHh-c-CCCCCCHHHHH
Confidence            999999999999999999885    45667799999999999999987421    1   1111111 1 11346899999


Q ss_pred             HHHHHHhCC
Q 035642          231 SLVAFLCFP  239 (367)
Q Consensus       231 ~ai~~L~s~  239 (367)
                      +++.++++.
T Consensus       473 ~~l~~~l~~  481 (525)
T 3qp9_A          473 TALDTALGH  481 (525)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhC
Confidence            999999854

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=3.5e-29  Score=287.86  Aligned_cols=237  Identities=16%  Similarity=0.164  Sum_probs=182.1

Q ss_pred             CCC-eEEEEcCCCh-hHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRG-IGHAIVEELAGFGAIIHTCSRNQTE-----LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         9 ~~~-~vLVTGas~G-IG~aia~~L~~~G~~Vi~~~R~~~~-----~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +++ ++|||||++| ||+++|+.|+++|++|++++|+.++     ++++.+++...+.++..+.+|++|+++++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            455 9999999999 9999999999999999999998776     66666676666778999999999999999999999


Q ss_pred             HH----HcCCCccEEEEcCCC----CCC-CCccCCCHH----HHHHhHHHhhHHHHHHHHHHHHHHHcCCC----CEEEE
Q 035642           82 SS----IFQGKLNLLVNNAAV----AVP-KEALDTTAE----YMSTLRSTNFESVFHLSKLAHPLLKASGN----GIIVF  144 (367)
Q Consensus        82 ~~----~~~g~iD~lI~~Ag~----~~~-~~~~~~~~e----~~~~~~~vNv~g~~~l~~~~~~~m~~~~~----g~IV~  144 (367)
                      .+    .+ |++|+||||||+    ... ....+.+.+    .++..+++|+.+++.+++.+.+.|...+.    +.|++
T Consensus      2214 ~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2214 GTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             TSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             Hhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            88    88 899999999997    211 122222333    34555999999999999999999987653    23444


Q ss_pred             ecCcccccCCCCCccHHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCC
Q 035642          145 ISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECE--QAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPIC  221 (367)
Q Consensus       145 iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e--~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~  221 (367)
                      .||..+.  .++..+|++||+|+++|+++++.|  +++ +|+||+++||+|. |++.....   ..    .......+.+
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~---~~----~~~~~~~~~r 2362 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQND---AI----VSAVEEAGVT 2362 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTT---TT----HHHHGGGSCB
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccch---hH----HHHHHhcCCC
Confidence            4544433  235568999999999999999999  765 6999999999998 66643211   11    1112233443


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCc-cccEEEeC--CCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYI-TGQVICVD--GGMTV  257 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~i-tG~~i~vd--gG~~~  257 (367)
                      + .+|+|+|.+++||+|++++++ +|+.+.+|  ||+..
T Consensus      2363 ~-~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2363 T-YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             C-EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             C-CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            3 499999999999999886654 56666666  99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.7e-28  Score=244.88  Aligned_cols=210  Identities=25%  Similarity=0.265  Sum_probs=173.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      |++|||||+||||++++++|+++|+ +|++++|+.   +..+++.+++...+.++.++.||++|++++.++++++.+.  
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~--  317 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED--  317 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT--
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh--
Confidence            7999999999999999999999999 899999974   4466777888888889999999999999999999988665  


Q ss_pred             CCccEEEEcCCCC-CCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVA-VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~-~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +++|+||||||+. ...++.+.+.+.|++++++|+.|++++.+.+.+.    ..++||++||.++..+.+++..|++||+
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAaKa  393 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAANA  393 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHHHH
Confidence            5899999999998 6778889999999999999999999999887543    4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ++++|++.++    .+|+++++|+||++.++.+......      ...+... . ....+|++++.++.+++.
T Consensus       394 ~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~~------~~~l~~~-g-~~~l~pe~~~~~l~~~l~  454 (496)
T 3mje_A          394 YLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPEV------HDRLVRQ-G-VLAMEPEHALGALDQMLE  454 (496)
T ss_dssp             HHHHHHHHHH----HTTCCCEEEEECEESSSCC------------CHHHHHT-T-EEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----hcCCeEEEEECCcccCCccccChHH------HHHHHhc-C-CCCCCHHHHHHHHHHHHc
Confidence            9999988665    3599999999999877654321111      1111111 0 112489999999999884

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.4e-28  Score=258.96  Aligned_cols=218  Identities=20%  Similarity=0.262  Sum_probs=176.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHH-HCCC-EEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELA-GFGA-IIHTCSRN---QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~-~~G~-~Vi~~~R~---~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.++++|||||++|||+++|+.|+ ++|+ +|++++|+   .+++++..+++...|.++.++.||++|+++++++++++
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4455699999999999999999999 7999 59999999   45677888888888899999999999999999999998


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                      .+.+  ++|+||||||+.....+.+++.++|++++++|+.|++++.+++.+.|      +||++||.++..+.+++..|+
T Consensus       607 ~~~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~Ya  678 (795)
T 3slk_A          607 PDEH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYA  678 (795)
T ss_dssp             CTTS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHH
T ss_pred             HHhC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHH
Confidence            7664  79999999999988899999999999999999999999999997766      799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+    |+++|+.+++++||++|+|+||++.|+++......    ..... ........ .++++....+..++....
T Consensus       679 Aaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~----~~~~~-~~~~g~~~-l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          679 AANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLRE----AEQDR-LARSGLLP-ISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHH----HHHHH-HHHTTBCC-CCHHHHHHHHHHHHTSSC
T ss_pred             HHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccH----HHHHH-HHhcCCCC-CCHHHHHHHHHHHHhCCC
Confidence            9996    45555556666799999999999998865321110    11111 22233333 466777777666664333


Q ss_pred             C
Q 035642          242 S  242 (367)
Q Consensus       242 ~  242 (367)
                      .
T Consensus       749 ~  749 (795)
T 3slk_A          749 T  749 (795)
T ss_dssp             S
T ss_pred             c
Confidence            3

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=4.5e-27  Score=234.96  Aligned_cols=213  Identities=22%  Similarity=0.241  Sum_probs=173.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChh---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQT---ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~---~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +...+++|||||+||||++++++|+++|+ +|++++|+..   .++++.+++...+.++.++.||++|++++.++++++ 
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            44456999999999999999999999999 5999999875   456677777777888999999999999999999988 


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +.+ +++|+||||||+.....+.+.+.+.+++++++|+.|++++.+++.+    .+.++||++||.++..+.++...|++
T Consensus       302 ~~~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          302 GDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             CTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             Hhc-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            556 7999999999998888888899999999999999999999998743    35689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCC-ccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTS-LSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +|++++.|++.++    ..|+++++|+||++.++ |....        ....+..  ......+++|+++++..++..
T Consensus       377 aka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~--------~~~~~~~--~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          377 GNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGP--------VADRFRR--HGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECCBC--------------------CTT--TTEECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchh--------HHHHHHh--cCCCCCCHHHHHHHHHHHHhC
Confidence            9999999987665    34899999999999876 32211        0011100  011356899999999998853

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=5.2e-27  Score=212.44  Aligned_cols=204  Identities=17%  Similarity=0.123  Sum_probs=157.0

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcE-EEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKV-TGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~-~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .++++ ++||||||||||++++++|+++|++|++++|+.++.+++.+      ..+ .++.+|++  ++       +.+.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~--~~-------~~~~   81 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE--ED-------FSHA   81 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT--SC-------CGGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH--HH-------HHHH
Confidence            34556 99999999999999999999999999999999987765432      256 78899999  33       3333


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---CCCccHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---PLTPLYG  161 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---~~~~~Y~  161 (367)
                      + +++|+||||||....        ++++..+++|+.++.++++++..    .+.++||++||..+..+.   +....|+
T Consensus        82 ~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~Y~  148 (236)
T 3e8x_A           82 F-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMRHYL  148 (236)
T ss_dssp             G-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGHHHH
T ss_pred             H-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhhhHH
Confidence            4 689999999997542        34778999999999999999854    346899999998776654   4567899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      ++|++++.+++       ..|++++.++||++.|+..........         .......+.+++|+|++++++++.. 
T Consensus       149 ~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~---------~~~~~~~~i~~~Dva~~~~~~~~~~-  211 (236)
T 3e8x_A          149 VAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP---------HFSEITRSITRHDVAKVIAELVDQQ-  211 (236)
T ss_dssp             HHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES---------SCSCCCCCEEHHHHHHHHHHHTTCG-
T ss_pred             HHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc---------CCCcccCcEeHHHHHHHHHHHhcCc-
Confidence            99999999876       358999999999999986432211000         1112356789999999999999543 


Q ss_pred             CCccccEEEeCCCcc
Q 035642          242 SYITGQVICVDGGMT  256 (367)
Q Consensus       242 ~~itG~~i~vdgG~~  256 (367)
                       ..+|+.+.+++|..
T Consensus       212 -~~~g~~~~v~~~~~  225 (236)
T 3e8x_A          212 -HTIGKTFEVLNGDT  225 (236)
T ss_dssp             -GGTTEEEEEEECSE
T ss_pred             -cccCCeEEEeCCCc
Confidence             37899999988743

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=3.7e-26  Score=217.07  Aligned_cols=233  Identities=12%  Similarity=0.113  Sum_probs=173.7

Q ss_pred             CCCCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEE-EccCCCHHHHHHHHH
Q 035642            2 YSYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGS-VCDLSSREQREKLME   79 (367)
Q Consensus         2 ~~~~~~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~-~~Dlsd~~sv~~~~~   79 (367)
                      .+|..+...++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+... +.++.++ .+|++|.+++++++ 
T Consensus         3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-   81 (342)
T 1y1p_A            3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-   81 (342)
T ss_dssp             STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-
T ss_pred             CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-
Confidence            34544433349999999999999999999999999999999988776665555432 3568888 79999998877765 


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCC---
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAP---  155 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~---  155 (367)
                             .++|+|||+||.....       +++++.+++|+.|+.++++++.+   ..+.++||++||.+++. +.+   
T Consensus        82 -------~~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~  144 (342)
T 1y1p_A           82 -------KGAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             -------TTCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCC
T ss_pred             -------cCCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCC
Confidence                   4689999999976432       23567899999999999999864   23468999999987753 211   


Q ss_pred             ---------------------------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhh
Q 035642          156 ---------------------------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN  208 (367)
Q Consensus       156 ---------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~  208 (367)
                                                 +...|+.||.+.+.+++.++.+++. ++++++++||++.++............
T Consensus       145 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~  223 (342)
T 1y1p_A          145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             CcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHH
Confidence                                       1257999999999999999999876 899999999999998764322111122


Q ss_pred             HHHHHHhhcC--------CCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          209 KIVEGLVSRT--------PICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       209 ~~~~~~~~~~--------p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      .++..+....        +...+.+++|+|+++++++.  ....+|+.+..+|+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~--~~~~~g~~~~~~g~~  276 (342)
T 1y1p_A          224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLV--LPQIERRRVYGTAGT  276 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHH--CTTCCSCEEEECCEE
T ss_pred             HHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHc--CcccCCceEEEeCCC
Confidence            2333322221        33457889999999999884  345678777777654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=7e-26  Score=227.40  Aligned_cols=209  Identities=22%  Similarity=0.270  Sum_probs=173.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChh---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQT---ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~---~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +...+++|||||+||||++++++|+++|+ +|++++|+..   .++++.+++...+.++.++.||++|.++++++++.  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            45556999999999999999999999999 6999999874   45677777777788899999999999999999876  


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                          +++|+||||||+.....+.+.+.+.+++++++|+.|++++.+++.+.   .+.++||++||.++..+.+++..|++
T Consensus       334 ----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             ----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             ----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHH
Confidence                57999999999988888888999999999999999999999876432   14689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVI-RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|++++.|++.++    ..|+++++|+||++ .|+|....    .. ....  ...   ....+++|+++++..++.
T Consensus       407 aKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~----~~-~~~~--~~g---~~~l~~e~~a~~l~~al~  469 (511)
T 2z5l_A          407 ANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGA----GE-ESLS--RRG---LRAMDPDAAVDALLGAMG  469 (511)
T ss_dssp             HHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCH----HH-HHHH--HHT---BCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccc----cH-HHHH--hcC---CCCCCHHHHHHHHHHHHh
Confidence            9999999998764    45999999999998 77775431    10 0111  111   135689999999999884

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=3.6e-26  Score=211.12  Aligned_cols=193  Identities=17%  Similarity=0.197  Sum_probs=155.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+||||++++++|+++|++|++++|+..+..         +.++.++.+|++|++++.+++        .++|+
T Consensus         5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~~D~   67 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMV--------AGCDG   67 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHH--------TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHH--------cCCCE
Confidence            8999999999999999999999999999999975432         457899999999999999888        46999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc------------cCCCCCcc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV------------TAAPLTPL  159 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~------------~~~~~~~~  159 (367)
                      ||||||..        +.+.|++++++|+.|++++++++.+    .+.++||++||..++            .+.+....
T Consensus        68 vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~  135 (267)
T 3rft_A           68 IVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGL  135 (267)
T ss_dssp             EEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSH
T ss_pred             EEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCCh
Confidence            99999984        2234788999999999999999843    457899999998877            33445678


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||++++.+++.++.++   |++++.|+||.+.++.....        ...         .+.+++|+++++..++. 
T Consensus       136 Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~--------~~~---------~~~~~~d~a~~~~~~~~-  194 (267)
T 3rft_A          136 YGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR--------MLS---------TWFSHDDFVSLIEAVFR-  194 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT--------HHH---------HBCCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC--------cee---------eEEcHHHHHHHHHHHHh-
Confidence            9999999999999999886   78999999999988753211        111         13478999999999884 


Q ss_pred             CCCCccccEEEeCCCc
Q 035642          240 AASYITGQVICVDGGM  255 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~  255 (367)
                       .....+..+.+.++.
T Consensus       195 -~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          195 -APVLGCPVVWGASAN  209 (267)
T ss_dssp             -CSCCCSCEEEECCCC
T ss_pred             -CCCCCceEEEEeCCC
Confidence             344445555555443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=8.1e-26  Score=215.32  Aligned_cols=226  Identities=13%  Similarity=0.055  Sum_probs=168.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++|+++++++++.      .++|
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~~d   75 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITK------YMPD   75 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhc------cCCC
Confidence            799999999999999999999999999999853 222333344433 34688899999999999988865      2599


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------------  153 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------------  153 (367)
                      +|||+||....    +.+.++++..+++|+.|+.++++++.+.+.   .++||++||.+.+..                 
T Consensus        76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~  148 (347)
T 1orr_A           76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVD  148 (347)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred             EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccccc
Confidence            99999997432    113456788999999999999999987642   269999999765431                 


Q ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-----
Q 035642          154 ----------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-----  218 (367)
Q Consensus       154 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-----  218 (367)
                                ......|+.||++.+.+++.++.++   |++++.++||++.++.............+........     
T Consensus       149 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (347)
T 1orr_A          149 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK  225 (347)
T ss_dssp             CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred             cccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCC
Confidence                      2245689999999999999999886   7999999999999987543211111112222222111     


Q ss_pred             CCC---------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          219 PIC---------RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       219 p~~---------~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      |..         .+.+++|+|+++++++.. ....+|+.++++||.
T Consensus       226 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          226 PFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            322         256899999999999842 245689999999985

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=3.4e-25  Score=198.42  Aligned_cols=191  Identities=9%  Similarity=0.005  Sum_probs=147.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELA-GFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~-~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++||||+||||++++++|+ ++|++|++++|+.+ +++++.    ..+.++.++.+|++|++++++++        .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAV--------TN   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHH--------cC
Confidence            579999999999999999999 89999999999987 655443    23567899999999999998887        46


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc----------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP----------  158 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~----------  158 (367)
                      +|+||||||..                   |+.     ++.+++.|++.+.++||++||..+..+.+...          
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            89999999953                   332     77778888888889999999998877655443          


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCc-cccccCChhhhHHHHHHhhcCC-CCCCCCHHHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSL-SDAIRHDPAKNKIVEGLVSRTP-ICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~-~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~dvA~ai~~L  236 (367)
                      .|+++|.+++.+.+.       .|++++.|+||++.++. .......          ....+ .+++.+++|+|++++++
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~dvA~~~~~l  192 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELI----------PEGAQFNDAQVSREAVVKAIFDI  192 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEE----------CTTSCCCCCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeec----------cCCccCCCceeeHHHHHHHHHHH
Confidence            899999999988763       48999999999998873 2211110          01112 23477899999999999


Q ss_pred             h--CCCCCCccccEEEeCCCc
Q 035642          237 C--FPAASYITGQVICVDGGM  255 (367)
Q Consensus       237 ~--s~~~~~itG~~i~vdgG~  255 (367)
                      +  ++.+.+++ +.+.+.++.
T Consensus       193 ~~~~~~~~~~~-~~~~i~~~~  212 (221)
T 3r6d_A          193 LHAADETPFHR-TSIGVGEPG  212 (221)
T ss_dssp             HTCSCCGGGTT-EEEEEECTT
T ss_pred             HHhcChhhhhc-ceeeecCCC
Confidence            9  87776654 455555443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=1.7e-25  Score=212.81  Aligned_cols=232  Identities=13%  Similarity=0.085  Sum_probs=169.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++||||||+||||++++++|+++|++|++++|+.+...+..+.+... +.++.++.+|++|++++++++++      ++
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~   78 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------HP   78 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------SC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------cC
Confidence            349999999999999999999999999999999876655555554432 55788899999999999999875      47


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLT  157 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~  157 (367)
                      +|+||||||......    ..+.....+++|+.++.++++++.    +.+.++||++||.+.+..           ....
T Consensus        79 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  150 (341)
T 3enk_A           79 ITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVMR----ERAVKRIVFSSSATVYGVPERSPIDETFPLSAT  150 (341)
T ss_dssp             CCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS
T ss_pred             CcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHHH----hCCCCEEEEEecceEecCCCCCCCCCCCCCCCC
Confidence            999999999764322    233455778999999999887653    455689999999776522           1234


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-------ChhhhHHHHHHhhc-CC----------
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-------DPAKNKIVEGLVSR-TP----------  219 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~p----------  219 (367)
                      ..|+.||.+.+.+++.++.++.  +++++.+.||.+.+|.......       .............. .+          
T Consensus       151 ~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (341)
T 3enk_A          151 NPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPT  228 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             ChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCC
Confidence            6899999999999999998863  5999999999998875422111       10111111111111 11          


Q ss_pred             -----CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          220 -----ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       220 -----~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                           ...+..++|+|+++++++........|+.+++++|...
T Consensus       229 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          229 PDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                 11356789999999998843213457999999988644

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=2.5e-25  Score=209.99  Aligned_cols=215  Identities=15%  Similarity=0.056  Sum_probs=165.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||+|+||++++++|+++|++|++++|+.+. +.    +     ++.++.+|++|+++++++++.      +++|
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------~~~d   76 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------IKPD   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------cCCC
Confidence            399999999999999999999999999999998764 21    1     578889999999999988864      3699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------------CCC
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------------PLT  157 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------------~~~  157 (367)
                      +|||+||.....    .+.++++..+++|+.|+.++++++ +.+  .+.++||++||.+.+...             +..
T Consensus        77 ~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~  149 (321)
T 2pk3_A           77 YIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPM  149 (321)
T ss_dssp             EEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC
T ss_pred             EEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC
Confidence            999999975321    122357889999999999999999 544  246899999998765432             346


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh---c-----------CCCCCC
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS---R-----------TPICRP  223 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~-----------~p~~~~  223 (367)
                      ..|+.||++.+.+++.++.++   |++++.++||.+.+|.....   .....+...+..   .           .+...+
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  223 (321)
T 2pk3_A          150 SPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLG---FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDF  223 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTT---SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCC---chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEee
Confidence            789999999999999999875   89999999999999865431   111112222222   1           112346


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .+++|+|++++++++..   .+|+.+++++|...
T Consensus       224 v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          224 TDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             EEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             EEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            78999999999998533   47899999988643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.92  E-value=2.3e-24  Score=206.36  Aligned_cols=218  Identities=14%  Similarity=0.078  Sum_probs=170.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHC-CC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGF-GA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~-G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ +||||||+|+||++++++|+++ |+ +|++++|++.+.+.+.+.+.  ..++.++.+|++|.+++.+++       
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~-------   89 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL-------   89 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT-------
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH-------
Confidence            344 9999999999999999999999 98 99999999888777766653  357889999999999888876       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       .++|+|||+||..... .   ........+++|+.|+.++++++.+.    +.++||++||..+..+   ...|++||+
T Consensus        90 -~~~D~Vih~Aa~~~~~-~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~sK~  157 (344)
T 2gn4_A           90 -EGVDICIHAAALKHVP-I---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGATKL  157 (344)
T ss_dssp             -TTCSEEEECCCCCCHH-H---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHHHHH
T ss_pred             -hcCCEEEECCCCCCCC-c---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHHHHH
Confidence             4689999999975421 1   22345688999999999999999763    4689999999876543   568999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-C--------CCCCCCHHHHHHHHHHH
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-P--------ICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-p--------~~~~~~~~dvA~ai~~L  236 (367)
                      +++.++++++.++++.|+++++++||.+.++...      ..+.+...+.... +        ...+.+++|+|++++++
T Consensus       158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~------~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS------VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS------HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC------HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence            9999999999888778999999999999987532      1111222222221 1        12357899999999998


Q ss_pred             hCCCCCCccccEEEeCCCcc
Q 035642          237 CFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~  256 (367)
                      +...   ..|+.+.++++..
T Consensus       232 l~~~---~~g~~~~~~~~~~  248 (344)
T 2gn4_A          232 LKRM---HGGEIFVPKIPSM  248 (344)
T ss_dssp             HHHC---CSSCEEEECCCEE
T ss_pred             Hhhc---cCCCEEecCCCcE
Confidence            8432   3688898887743

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1.4e-25  Score=203.34  Aligned_cols=194  Identities=15%  Similarity=0.161  Sum_probs=149.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+||||++++++|+++|+  +|++++|+.++.+...      ...+.++.+|++|++++++++        .+
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~--------~~   84 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF--------QG   84 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG--------SS
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh--------cC
Confidence            3899999999999999999999999  9999999876543211      125778899999998887766        46


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|+||||||...       ..+.++..+++|+.++.++++++.    +.+.++||++||.++..+  ....|+++|++++
T Consensus        85 ~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e  151 (242)
T 2bka_A           85 HDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADKS--SNFLYLQVKGEVE  151 (242)
T ss_dssp             CSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             CCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCCC--CcchHHHHHHHHH
Confidence            999999999642       124578899999999999988764    345689999999877643  4568999999999


Q ss_pred             HHHHHHHHHhCCCCe-EEEEEecCcccCCccccccCChhhhHHHHHHhhcCC----CCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNI-RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP----ICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gI-rvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      .+++.+       ++ ++++|+||++.|+.....    .............|    .+++++++|+|+++++++++...
T Consensus       152 ~~~~~~-------~~~~~~~vrpg~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          152 AKVEEL-------KFDRYSVFRPGVLLCDRQESR----PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHTT-------CCSEEEEEECCEEECTTGGGS----HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHhc-------CCCCeEEEcCceecCCCCCCc----HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            998764       46 899999999999965321    11112223333344    45788999999999999975443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=2.5e-25  Score=199.05  Aligned_cols=194  Identities=15%  Similarity=0.210  Sum_probs=156.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+||||+|+||++++++|+++|++|++++|+.++.+..        .++.++.+|++| ++++.+++        .++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCCC
Confidence            599999999999999999999999999999998754322        468999999999 98888776        4699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC-------CccHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL-------TPLYGPY  163 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~-------~~~Y~as  163 (367)
                      +||||||....            ..+++|+.++.++++++.    +.+.++||++||..+..+.+.       ...|+.+
T Consensus        66 ~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           66 AIINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EEEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EEEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            99999997642            267899999999998874    455689999999888766555       6789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |.+++.+++      ...|++++.++||++.++.......            .......+.+++|+|+++++++..  ..
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~------------~~~~~~~~i~~~Dva~~i~~~l~~--~~  189 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLID------------INDEVSASNTIGDVADTIKELVMT--DH  189 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE------------ESSSCCCCEEHHHHHHHHHHHHTC--GG
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc------------cCCCcCCcccHHHHHHHHHHHHhC--cc
Confidence            999999887      2468999999999999875432111            013445678999999999999954  34


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      ..|+.+++++|...
T Consensus       190 ~~g~~~~i~~g~~~  203 (219)
T 3dqp_A          190 SIGKVISMHNGKTA  203 (219)
T ss_dssp             GTTEEEEEEECSEE
T ss_pred             ccCcEEEeCCCCcc
Confidence            56999999777543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=4.2e-25  Score=211.79  Aligned_cols=225  Identities=13%  Similarity=0.101  Sum_probs=168.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++. .+.++.++.+|++|++++.+++++      ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ------YQ   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh------cC
Confidence            5999999999999999999998 799999998642  22211 1111 145788999999999999998865      36


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-----CCEEEEecCccccc-----------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-----NGIIVFISSVAGVT-----------  152 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-----~g~IV~iSS~~~~~-----------  152 (367)
                      +|+||||||....    +.+.++++..+++|+.|+.++++++.+.|..-+     .++||++||.+.+.           
T Consensus        74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            9999999997532    123456788999999999999999999875321     35999999975432           


Q ss_pred             ----------CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---
Q 035642          153 ----------AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---  219 (367)
Q Consensus       153 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---  219 (367)
                                +......|+.||++++.+++.++.++   |++++.++||.+.|+....   ..........+....+   
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~  223 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFP---EKLIPLVILNALEGKPLPI  223 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCT---TSHHHHHHHHHHHTCCEEE
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCc---ccHHHHHHHHHHcCCCceE
Confidence                      12345689999999999999999886   7999999999999987532   1111223333322221   


Q ss_pred             ------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          220 ------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       220 ------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                            ...+.+++|+|++++++++..   .+|+.+++++|...
T Consensus       224 ~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          224 YGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             ETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             cCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence                  234678999999999998432   47999999998643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=5.3e-24  Score=203.78  Aligned_cols=229  Identities=11%  Similarity=0.021  Sum_probs=170.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT----ELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~----~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +++ +||||||||+||++++++|+++|++|++++|+..    .++.+.+.+.. .+.++.++.+|++|.+++++++    
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----  100 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----  100 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh----
Confidence            344 8999999999999999999999999999999753    33333332211 1246889999999999888877    


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-------
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-------  155 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-------  155 (367)
                          .++|+|||+||.....    .+.++++..+++|+.++.++++++.+    .+.++||++||.+.+...+       
T Consensus       101 ----~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~  168 (352)
T 1sb8_A          101 ----AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVED  168 (352)
T ss_dssp             ----TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ----cCCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCC
Confidence                4689999999975321    13456788999999999999999865    3568999999987764432       


Q ss_pred             ----CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCC---------C
Q 035642          156 ----LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPI---------C  221 (367)
Q Consensus       156 ----~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~---------~  221 (367)
                          ....|+.+|.+.+.+++.++.++   |++++.++||.+.+|........ .....+...+....+.         .
T Consensus       169 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (352)
T 1sb8_A          169 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  245 (352)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceE
Confidence                35689999999999999999886   79999999999999865322101 1112233333333332         2


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .+..++|+|+++++++.. .....|+++++++|...
T Consensus       246 ~~i~v~Dva~a~~~~~~~-~~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          246 DFCYIENTVQANLLAATA-GLDARNQVYNIAVGGRT  280 (352)
T ss_dssp             CCEEHHHHHHHHHHHHTC-CGGGCSEEEEESCSCCE
T ss_pred             eeEEHHHHHHHHHHHHhc-cccCCCceEEeCCCCCc
Confidence            467899999999998853 13457899999887543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=9e-25  Score=207.43  Aligned_cols=220  Identities=11%  Similarity=0.019  Sum_probs=164.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChh--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQT--ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~--~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+. .+.++.++.+|++|++++++++        +
T Consensus         5 ~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~--------~   74 (336)
T 2hun_A            5 KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV--------R   74 (336)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH--------H
T ss_pred             eEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh--------h
Confidence            79999999999999999999997  89999998642  11111 1111 1457889999999999988887        3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------CCCC
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------AAPL  156 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------~~~~  156 (367)
                      ++|+|||+||....    +.+.++++..+++|+.|+.++++++.+.   ...++||++||.+.+.           +...
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           75 KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence            58999999997532    1134567789999999999999999876   2247999999976432           2344


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCCCCCHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICRPGEPD  227 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~  227 (367)
                      ...|+.||++++.+++.++.++   |++++.++||.+.++....   ..........+....+         ...+..++
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFP---EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCT---TSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCc---CchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            5689999999999999999875   7999999999999987531   1111223333332221         23467899


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+|++++++++.   ..+|+.++++||...
T Consensus       222 Dva~~~~~~~~~---~~~g~~~~v~~~~~~  248 (336)
T 2hun_A          222 DHVRAIELVLLK---GESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHHHHH---CCTTCEEEECCSCEE
T ss_pred             HHHHHHHHHHhC---CCCCCEEEeCCCCcc
Confidence            999999999843   247999999998643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=4.2e-25  Score=209.82  Aligned_cols=219  Identities=15%  Similarity=0.050  Sum_probs=156.1

Q ss_pred             CCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            3 SYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         3 ~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++...++++ +||||||+|+||++++++|+++|++|++++|+.+...+..+.+    .++.++.+|++|.++++++++++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc
Confidence            345566777 9999999999999999999999999999999754322111111    36888999999999999888653


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----C-
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----P-  155 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----~-  155 (367)
                            ++|+||||||.....     +.++++  +++|+.++.++++++..    .+.++||++||.+.+...     + 
T Consensus        88 ------~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~  150 (330)
T 2pzm_A           88 ------KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPI  150 (330)
T ss_dssp             ------CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ------CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCc
Confidence                  589999999976432     334555  89999999999999874    346899999998776433     2 


Q ss_pred             -----CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC------CCCCC
Q 035642          156 -----LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP------ICRPG  224 (367)
Q Consensus       156 -----~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~  224 (367)
                           ....|++||++++.+++.+       +++...|.|+.+.+|...    ..........+....+      ...+.
T Consensus       151 ~E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i  219 (330)
T 2pzm_A          151 DSPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLA----IGPIPTFYKRLKAGQKCFCSDTVRDFL  219 (330)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCC----SSHHHHHHHHHHTTCCCCEESCEECEE
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCC----CCHHHHHHHHHHcCCEEeCCCCEecce
Confidence                 5678999999999999887       344455555555544320    0011112222211111      34567


Q ss_pred             CHHHHHH-HHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSS-LVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~-ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +++|+|+ +++++++..  .  |+.+++++|...
T Consensus       220 ~~~Dva~~a~~~~~~~~--~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          220 DMSDFLAIADLSLQEGR--P--TGVFNVSTGEGH  249 (330)
T ss_dssp             EHHHHHHHHHHHTSTTC--C--CEEEEESCSCCE
T ss_pred             eHHHHHHHHHHHHhhcC--C--CCEEEeCCCCCC
Confidence            9999999 999998642  2  899999998643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=4.1e-24  Score=203.27  Aligned_cols=220  Identities=15%  Similarity=0.086  Sum_probs=154.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE--WKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~--l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++||||||+|+||++++++|+++|++|++++|+.+...+....  +...+.++.++.+|++|++++++++        ..
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~   77 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI--------KG   77 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH--------TT
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH--------cC
Confidence            3899999999999999999999999999999987644332221  1110125888999999999888776        35


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-------------  155 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-------------  155 (367)
                      +|+|||+|+...   ..  ..+..+..+++|+.|+.++++++.+..   +.++||++||.++..+.+             
T Consensus        78 ~d~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~  149 (337)
T 2c29_D           78 CTGVFHVATPMD---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWSD  149 (337)
T ss_dssp             CSEEEECCCCCC---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCCC
T ss_pred             CCEEEEeccccC---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCCc
Confidence            899999998652   11  122345789999999999999987642   258999999987654321             


Q ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHH---HHH---HhhcCCC
Q 035642          156 ---------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKI---VEG---LVSRTPI  220 (367)
Q Consensus       156 ---------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~---~~~---~~~~~p~  220 (367)
                               ....|++||.+.+.+++.++.+.   |+++++++||.+.+|...... .......   ...   .....+.
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~  225 (337)
T 2c29_D          150 MEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSM-PPSLITALSPITGNEAHYSIIRQ  225 (337)
T ss_dssp             HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSC-CHHHHHHTHHHHTCGGGHHHHTE
T ss_pred             hhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCC-CchHHHHHHHHcCCCccccccCC
Confidence                     22369999999999999887653   899999999999998653221 1110000   000   0011123


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          221 CRPGEPDEVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      .++.+++|+|+++++++..  ...+|.. .+.+
T Consensus       226 ~~~i~v~Dva~a~~~~~~~--~~~~~~~-~~~~  255 (337)
T 2c29_D          226 GQFVHLDDLCNAHIYLFEN--PKAEGRY-ICSS  255 (337)
T ss_dssp             EEEEEHHHHHHHHHHHHHC--TTCCEEE-EECC
T ss_pred             CCEEEHHHHHHHHHHHhcC--cccCceE-EEeC
Confidence            4588999999999999843  3445654 4433

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=7.3e-24  Score=191.94  Aligned_cols=193  Identities=12%  Similarity=0.042  Sum_probs=137.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+||||++++++|+++| ++|++++|+.+++++.      ....+.++.+|++|++++++++        ..+|
T Consensus        25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~--------~~~D   90 (236)
T 3qvo_A           25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAM--------QGQD   90 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHH--------TTCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHh--------cCCC
Confidence            89999999999999999999999 8999999998764321      1346889999999999999887        4689


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc---------HH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL---------YG  161 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~---------Y~  161 (367)
                      +||||||..        ..              ...++.+++.|++.+.++||++||..++.+.++...         |.
T Consensus        91 ~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~  148 (236)
T 3qvo_A           91 IVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPL  148 (236)
T ss_dssp             EEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGG
T ss_pred             EEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchH
Confidence            999999852        11              123557778888888899999999887655443211         11


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-CCCCCCHHHHHHHHHHHhCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-ICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ..+...+       ..+.+.||+++.|+||++.++........          ....+ .+++++++|+|+++++++++.
T Consensus       149 ~~~~~~~-------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~----------~~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          149 KPFRRAA-------DAIEASGLEYTILRPAWLTDEDIIDYELT----------SRNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             HHHHHHH-------HHHHTSCSEEEEEEECEEECCSCCCCEEE----------CTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             HHHHHHH-------HHHHHCCCCEEEEeCCcccCCCCcceEEe----------ccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence            1222211       12235699999999999988754321110          11123 367789999999999999877


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      ..++ |+.+.++++....
T Consensus       212 ~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          212 EKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             TTTT-TEEEEEECSSCCC
T ss_pred             cccc-CeeEEecCCCCCC
Confidence            6665 8999999886654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=2.2e-23  Score=199.16  Aligned_cols=227  Identities=13%  Similarity=0.066  Sum_probs=170.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-----LKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-----~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++||||||||+||++++++|+++|++|++++|+........+.+....     .++.++.+|++|++++.+++       
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   98 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-------   98 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-------
Confidence            399999999999999999999999999999997654444444443221     57899999999999888877       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC----------
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP----------  155 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~----------  155 (367)
                       .++|+|||+||.....    ...+++...+++|+.++.++++++..    .+.++||++||.+.+...+          
T Consensus        99 -~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  169 (351)
T 3ruf_A           99 -KGVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKVEENIG  169 (351)
T ss_dssp             -TTCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             -cCCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCccCCCC
Confidence             4699999999975321    13456678899999999999998854    3467999999987664322          


Q ss_pred             -CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCC---------CCCC
Q 035642          156 -LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPI---------CRPG  224 (367)
Q Consensus       156 -~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~---------~~~~  224 (367)
                       ....|+.+|.+.+.+++.++.+.   |++++.+.||.+.+|........ .....+...+....+.         ..+.
T Consensus       170 ~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  246 (351)
T 3ruf_A          170 NPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC  246 (351)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeE
Confidence             24689999999999999999886   79999999999998865432111 1122234444443332         1356


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .++|+|++++.++... ....|+.+++.+|...
T Consensus       247 ~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          247 YIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            7999999999988431 3467999999887643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.4e-22  Score=197.15  Aligned_cols=226  Identities=12%  Similarity=0.047  Sum_probs=163.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH-----------------HHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN-----------------ERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~-----------------~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      +||||||+|+||++++++|+++|++|++++|+.....                 ...+.....+.++.++.+|++|++++
T Consensus        13 ~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~   92 (404)
T 1i24_A           13 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFL   92 (404)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHH
T ss_pred             eEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHH
Confidence            8999999999999999999999999999998754321                 11111111245688899999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCccccc-
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVT-  152 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~-  152 (367)
                      .++++..      ++|+|||+||....... ..+.+.+...+++|+.|+.++++++.+.    +. ++||++||.+.+. 
T Consensus        93 ~~~~~~~------~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg~  161 (404)
T 1i24_A           93 AESFKSF------EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYGT  161 (404)
T ss_dssp             HHHHHHH------CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGCC
T ss_pred             HHHHhcc------CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhCC
Confidence            9888653      58999999997543211 2256667889999999999999998654    23 5999999976542 


Q ss_pred             -----------------------CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-------
Q 035642          153 -----------------------AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-------  202 (367)
Q Consensus       153 -----------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-------  202 (367)
                                             +......|+.||.+++.+++.++.++   |+++++++||.+.+|......       
T Consensus       162 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~~~~~  238 (404)
T 1i24_A          162 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEELRN  238 (404)
T ss_dssp             CSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             CCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccccccc
Confidence                                   22235689999999999999998876   899999999999998643110       


Q ss_pred             ----C---ChhhhHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccc--cEEEeCC
Q 035642          203 ----H---DPAKNKIVEGLVSRTPI---------CRPGEPDEVSSLVAFLCFPAASYITG--QVICVDG  253 (367)
Q Consensus       203 ----~---~~~~~~~~~~~~~~~p~---------~~~~~~~dvA~ai~~L~s~~~~~itG--~~i~vdg  253 (367)
                          .   ......++..+....+.         ..+.+++|+|++++.++.  .....|  +.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~--~~~~~g~~~~yni~~  305 (404)
T 1i24_A          239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA--NPAKAGEFRVFNQFT  305 (404)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH--SCCCTTCEEEEEECS
T ss_pred             ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHh--CcccCCCceEEEECC
Confidence                0   11122233333333221         134679999999999883  333346  6888865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=1.4e-23  Score=201.02  Aligned_cols=227  Identities=15%  Similarity=0.055  Sum_probs=168.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+.++.....+.+. .+.++.++.+|++|++++.++++..      ++|+
T Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~d~   83 (357)
T 1rkx_A           11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------QPEI   83 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------CCCE
Confidence            89999999999999999999999999999998765444433332 2446788999999999999888753      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------CCCCCcc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------AAPLTPL  159 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------~~~~~~~  159 (367)
                      |||+||...    .+.+.++++..+++|+.|+.++++++.+.   .+.++||++||.+.+.            +......
T Consensus        84 vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~  156 (357)
T 1rkx_A           84 VFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDP  156 (357)
T ss_dssp             EEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSH
T ss_pred             EEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCc
Confidence            999999632    11235667889999999999999999763   2368999999986432            2234568


Q ss_pred             HHHHHHHHHHHHHHHHHHhC------CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC--------CCCCCC
Q 035642          160 YGPYNGAMNQLTKHLECEQA------KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP--------ICRPGE  225 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~------~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~  225 (367)
                      |+.||.+.+.+++.++.++.      +.|++++.++||++.+|....  .......+...+....+        ...+..
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~  234 (357)
T 1rkx_A          157 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA--LDRIVPDILRAFEQSQPVIIRNPHAIRPWQH  234 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC--SSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc--cccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence            99999999999999999875      348999999999999985421  11112223333333222        123678


Q ss_pred             HHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 035642          226 PDEVSSLVAFLCFPA--ASYITGQVICVDGG  254 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~--~~~itG~~i~vdgG  254 (367)
                      ++|+|++++.++...  .....|+.+++.+|
T Consensus       235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            999999999887320  11235778888764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=4.5e-24  Score=200.72  Aligned_cols=218  Identities=18%  Similarity=0.127  Sum_probs=160.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+++|++|++++|.......   .+   ...+.++.+|++|++++++++++      .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---PKGVPFFRVDLRDKEGVERAFRE------FRPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---CTTCCEECCCTTCHHHHHHHHHH------HCCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---ccCeEEEECCCCCHHHHHHHHHh------cCCCE
Confidence            69999999999999999999999999999985432110   01   13466788999999999888864      25899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------------CCCc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------------PLTP  158 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------------~~~~  158 (367)
                      +||+||.....    .+.++++..+++|+.|++++++++..    .+.++||++||.++..+.             .+..
T Consensus        70 vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           70 VSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             EEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             EEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99999965321    13456788999999999999998853    446899999998332221             2356


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC--------------CCCCC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP--------------ICRPG  224 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p--------------~~~~~  224 (367)
                      .|++||++++.+++.++.++   |++++.++||.+.+|.............+...+....+              ...+.
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence            89999999999999999875   79999999999999865322111111222333322222              12456


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .++|+|+++++++..  .   |+.+++++|...
T Consensus       219 ~v~Dva~a~~~~~~~--~---~~~~~i~~~~~~  246 (311)
T 2p5y_A          219 YVGDVAEAHALALFS--L---EGIYNVGTGEGH  246 (311)
T ss_dssp             EHHHHHHHHHHHHHH--C---CEEEEESCSCCE
T ss_pred             EHHHHHHHHHHHHhC--C---CCEEEeCCCCCc
Confidence            799999999998843  2   889999888643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=9.6e-24  Score=201.27  Aligned_cols=227  Identities=12%  Similarity=0.035  Sum_probs=160.9

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~-~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.+++ +||||||||+||++++++|+++|  ++|++.+|+.... ....+.+ ....++.++.+|++|++++.++++. 
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKE-   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH-
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhh-
Confidence            344556 99999999999999999999999  6888888764211 1111111 1134789999999999999999875 


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC------
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP------  155 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~------  155 (367)
                           .++|+|||+||......    ..++++..+++|+.|+.++++++..    .+.++||++||.+.+...+      
T Consensus        97 -----~~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           97 -----RDVQVIVNFAAESHVDR----SIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             -----HTCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             -----cCCCEEEECCcccchhh----hhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcC
Confidence                 25899999999764322    4456778899999999999998854    3568999999986554321      


Q ss_pred             ------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC--------
Q 035642          156 ------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC--------  221 (367)
Q Consensus       156 ------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~--------  221 (367)
                            ....|+.+|.+.+.+++.++.+.   |++++.+.||.+.+|.....   .....+...+....+..        
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE---KLIPLMVTNALEGKKLPLYGDGLNV  237 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT---SHHHHHHHHHHTTCCCEEETTSCCE
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc---chHHHHHHHHHcCCCceeeCCCCeE
Confidence                  23689999999999999999875   79999999999998864321   12222344444443322        


Q ss_pred             -CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          222 -RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       222 -~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                       .+..++|+|+++++++...  . .|+++++.+|..
T Consensus       238 ~~~i~v~Dva~a~~~~~~~~--~-~g~~~~i~~~~~  270 (346)
T 4egb_A          238 RDWLHVTDHCSAIDVVLHKG--R-VGEVYNIGGNNE  270 (346)
T ss_dssp             ECEEEHHHHHHHHHHHHHHC--C-TTCEEEECCSCC
T ss_pred             EeeEEHHHHHHHHHHHHhcC--C-CCCEEEECCCCc
Confidence             2346999999999998432  2 799999998864

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=3.4e-24  Score=194.71  Aligned_cols=212  Identities=10%  Similarity=0.033  Sum_probs=154.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++++||||+|+||++++++|+++  |++|++++|+.++.+.+       +.++.++.+|++|++++.+++        .+
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~--------~~   69 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------QG   69 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHH--------cC
Confidence            38999999999999999999999  89999999998665432       335668889999999998887        45


Q ss_pred             ccEEEEcCCCCCCCCc---------cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC--
Q 035642           89 LNLLVNNAAVAVPKEA---------LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT--  157 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~---------~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~--  157 (367)
                      +|+||||||.......         .+...+.+++.+++|+.++.++++++.+.    +.++||++||..+..+....  
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~  145 (253)
T 1xq6_A           70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNK  145 (253)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGG
T ss_pred             CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCcccc
Confidence            8999999997542110         11122344567899999999999887543    46899999998876443332  


Q ss_pred             ---ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          158 ---PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       158 ---~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                         ..|+.+|.+++.+++.       .|++++.++||++.++...........   ...+..  ...++.+++|+|++++
T Consensus       146 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGK---DDELLQ--TDTKTVPRADVAEVCI  213 (253)
T ss_dssp             GGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEES---TTGGGG--SSCCEEEHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccC---CcCCcC--CCCcEEcHHHHHHHHH
Confidence               3477799999988753       589999999999998864311000000   000111  1245779999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCc
Q 035642          235 FLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~  255 (367)
                      +++..  ...+|+.+++++|.
T Consensus       214 ~~~~~--~~~~g~~~~i~~~~  232 (253)
T 1xq6_A          214 QALLF--EEAKNKAFDLGSKP  232 (253)
T ss_dssp             HHTTC--GGGTTEEEEEEECC
T ss_pred             HHHcC--ccccCCEEEecCCC
Confidence            99954  33579999998863

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=4.9e-24  Score=204.88  Aligned_cols=225  Identities=14%  Similarity=0.044  Sum_probs=158.9

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHH--CCCEEEEEeCChhHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAG--FGAIIHTCSRNQTELNERL-------QEWKLKGLKVTGSVCDLSSREQRE   75 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~--~G~~Vi~~~R~~~~~~~~~-------~~l~~~~~~~~~~~~Dlsd~~sv~   75 (367)
                      .|++++ +||||||+|+||++++++|++  +|++|++++|+........       ......+.++.++.+|++|+++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            356666 999999999999999999999  9999999999764211000       001112446788999999999988


Q ss_pred             HHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC
Q 035642           76 KLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP  155 (367)
Q Consensus        76 ~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~  155 (367)
                      ++      .. .++|+|||+||....      +.++++..+++|+.|+.++++++..    .+ ++||++||.+.+....
T Consensus        85 ~~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           85 RL------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----KK-AKVIYASSAGVYGNTK  146 (362)
T ss_dssp             HH------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGGCSCC
T ss_pred             Hh------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEeCcHHHhCCCC
Confidence            87      12 679999999996432      3345678999999999999999843    33 4599999965543221


Q ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHhhcCCC----
Q 035642          156 ----------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRTPI----  220 (367)
Q Consensus       156 ----------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~----  220 (367)
                                ....|+.||.+.+.+++.++.+     ++++.+.|+.+.+|....... ......+...+....+.    
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE  221 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence                      2345999999999999988754     788889999998876433211 01112233333333222    


Q ss_pred             -----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          221 -----CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       221 -----~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                           ..+..++|+|+++++++...   .+| .+++++|...
T Consensus       222 ~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~~  259 (362)
T 3sxp_A          222 FGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQAR  259 (362)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCEE
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCCc
Confidence                 23567999999999999643   368 9999887643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.7e-23  Score=199.02  Aligned_cols=209  Identities=11%  Similarity=0.105  Sum_probs=155.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+.++.+.+    .  ..++.++.+|++|++++.+++        .++|+
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~Dl~d~~~~~~~~--------~~~d~   80 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A--YLEPECRVAEMLDHAGLERAL--------RGLDG   80 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G--GGCCEEEECCTTCHHHHHHHT--------TTCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c--cCCeEEEEecCCCHHHHHHHH--------cCCCE
Confidence            799999999999999999999999999999987654322    1  125778899999999888776        45899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC---------------
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL---------------  156 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~---------------  156 (367)
                      |||+||....      ..++++..+++|+.++.++++++.+.    +.++||++||.+.+...++               
T Consensus        81 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~  150 (342)
T 2x4g_A           81 VIFSAGYYPS------RPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPS  150 (342)
T ss_dssp             EEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCT
T ss_pred             EEECCccCcC------CCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccc
Confidence            9999996531      34567788999999999999999764    4579999999887654443               


Q ss_pred             -CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC----C--CCCCHHHH
Q 035642          157 -TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI----C--RPGEPDEV  229 (367)
Q Consensus       157 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~----~--~~~~~~dv  229 (367)
                       ...|+.+|.+.+.+++.++.   . |++++.++||++.++......    .......+....+.    .  .+.+++|+
T Consensus       151 ~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  222 (342)
T 2x4g_A          151 GKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT----TGRVITAIGNGEMTHYVAGQRNVIDAAEA  222 (342)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS----TTHHHHHHHTTCCCEEECCEEEEEEHHHH
T ss_pred             ccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc----HHHHHHHHHcCCCccccCCCcceeeHHHH
Confidence             67899999999999999886   3 899999999999998652100    11233333333221    2  26689999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          230 SSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       230 A~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      |+++++++....   .|+.+++++|.
T Consensus       223 a~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          223 GRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             HHHHHHHHhCCC---CCceEEEcCCc
Confidence            999999985332   28999999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=5.8e-23  Score=180.92  Aligned_cols=197  Identities=11%  Similarity=0.046  Sum_probs=150.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+|+||++++++|+++|++|++++|+.++....      ...++.++.+|++|++++.+++        ..+|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~--------~~~d   69 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AGQD   69 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TTCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHH--------cCCC
Confidence            4899999999999999999999999999999998654211      1346788999999999988877        4589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC----CCccHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP----LTPLYGPYNGA  166 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~----~~~~Y~asKaa  166 (367)
                      ++||+||.....   +        ..++|+.++.++++++.+    .+.++||++||.......+    ....|+.+|.+
T Consensus        70 ~vi~~a~~~~~~---~--------~~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~  134 (206)
T 1hdo_A           70 AVIVLLGTRNDL---S--------PTTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (206)
T ss_dssp             EEEECCCCTTCC---S--------CCCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             EEEECccCCCCC---C--------ccchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHHHHHHH
Confidence            999999975431   1        124788898888888754    3467999999987665444    45689999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcc-cCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVI-RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      ++.+.+.       .|++++.++||++ .++.......  .        ....|.+.+.+++|+|+++++++..  ...+
T Consensus       135 ~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~--~--------~~~~~~~~~i~~~Dva~~~~~~~~~--~~~~  195 (206)
T 1hdo_A          135 MHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV--T--------LDGRGPSRVISKHDLGHFMLRCLTT--DEYD  195 (206)
T ss_dssp             HHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE--E--------SSSCSSCSEEEHHHHHHHHHHTTSC--STTT
T ss_pred             HHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe--c--------ccCCCCCCccCHHHHHHHHHHHhcC--cccc
Confidence            9998842       4899999999998 3433221110  0        0112225778999999999999954  3468


Q ss_pred             ccEEEeCCCc
Q 035642          246 GQVICVDGGM  255 (367)
Q Consensus       246 G~~i~vdgG~  255 (367)
                      |+.+.++||.
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            9999999985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=2.2e-23  Score=198.16  Aligned_cols=220  Identities=15%  Similarity=-0.000  Sum_probs=158.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE-RLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~-~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+|+||++++++|+++|++|++++|+.++... ..+.+. .+.++.++.+|++|++++.++++.+      ++|
T Consensus         5 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~d   77 (345)
T 2z1m_A            5 RALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV------QPD   77 (345)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH------CCS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc------CCC
Confidence            89999999999999999999999999999998765321 112221 1346888999999999999988754      589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-----------cCCCCCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-----------TAAPLTPL  159 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-----------~~~~~~~~  159 (367)
                      +||||||.....    .+.++++..+++|+.|+.++++++.+.   ...++||++||.+.+           .+..+...
T Consensus        78 ~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~  150 (345)
T 2z1m_A           78 EVYNLAAQSFVG----VSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSP  150 (345)
T ss_dssp             EEEECCCCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCcchh----hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCCCCh
Confidence            999999975321    123457889999999999999999753   113799999998653           22344678


Q ss_pred             HHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc---------CCCC-CCCCH
Q 035642          160 YGPYNGAMNQLTKHLECEQA---KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR---------TPIC-RPGEP  226 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~---~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~p~~-~~~~~  226 (367)
                      |+.||++++.+++.++.+++   ..++.++.+.||...|.+....      ......+...         .+.. .+.++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  224 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI------TYSLARIKYGLQDKLVLGNLNAKRDWGYA  224 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH------HHHHHHHHTTSCSCEEESCTTCEECCEEH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH------HHHHHHHHcCCCCeeeeCCCCceeeeEEH
Confidence            99999999999999999875   2345667788887776643211      0011111111         1122 27889


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      +|+|++++++++...    ++.+++.+|.
T Consensus       225 ~Dva~a~~~~~~~~~----~~~~~i~~~~  249 (345)
T 2z1m_A          225 PEYVEAMWLMMQQPE----PDDYVIATGE  249 (345)
T ss_dssp             HHHHHHHHHHHTSSS----CCCEEECCSC
T ss_pred             HHHHHHHHHHHhCCC----CceEEEeCCC
Confidence            999999999995432    3567776664

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=6.8e-23  Score=195.39  Aligned_cols=230  Identities=14%  Similarity=0.082  Sum_probs=162.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH------HHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE------LNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~------~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++||||||+|+||++++++|+++|++|++++|+...      ..+..+.+.. .+.++.++.+|++|++++++++++   
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh---
Confidence            489999999999999999999999999999885432      1122222322 245678899999999999888764   


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------  153 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------  153 (367)
                         .++|+|||+||......    +.++++..+++|+.++.++++++.    +.+.++||++||.+.+..          
T Consensus        80 ---~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~E~~  148 (348)
T 1ek6_A           80 ---YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEAH  148 (348)
T ss_dssp             ---CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ---cCCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcCCCC
Confidence               26999999999753221    345677899999999999998764    345689999999776532          


Q ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-------CChhhhHHHHHHh-hcCC----
Q 035642          154 --APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-------HDPAKNKIVEGLV-SRTP----  219 (367)
Q Consensus       154 --~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-------~~~~~~~~~~~~~-~~~p----  219 (367)
                        .+....|+.||++++.+++.++.+ . .+++++.+.|+.+.++......       ............. ...+    
T Consensus       149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1ek6_A          149 PTGGCTNPYGKSKFFIEEMIRDLCQA-D-KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (348)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH-C-TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhc-C-CCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEe
Confidence              122678999999999999999987 3 3699999999999887421110       0111111222222 1111    


Q ss_pred             -----------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          220 -----------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       220 -----------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                                 ...+.+++|+|++++.++........|+.+++.+|..
T Consensus       227 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             CCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence                       1235679999999999884321122348999987653

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=2.1e-23  Score=198.89  Aligned_cols=218  Identities=16%  Similarity=0.101  Sum_probs=162.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~-~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++||||||+|+||++++++|+++  |++|++++|+.... .+..+.+  .+.++.++.+|++|++++++++        .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~--------~   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLA--------A   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHH--------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHh--------h
Confidence            37999999999999999999998  89999999975211 1111111  1357889999999999988887        3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc---------------
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT---------------  152 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~---------------  152 (367)
                      .+|+|||+||....    +.+.++++..+++|+.|+.++++++.+.    + ++||++||.+.+.               
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            57999999997532    1134556788999999999999999775    2 4999999976432               


Q ss_pred             --------CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-----
Q 035642          153 --------AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-----  219 (367)
Q Consensus       153 --------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-----  219 (367)
                              +......|+.||.+.+.+++.++.++   |++++.++||.+.++....   ..........+....+     
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHI---EKFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCT---TSHHHHHHHHHHHTCCCEEET
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCc---cchHHHHHHHHHcCCCceEec
Confidence                    12345689999999999999999886   7999999999999987532   1111123333332222     


Q ss_pred             ----CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          220 ----ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       220 ----~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                          ...+.+++|+|+++++++...   .+|+.+++++|..
T Consensus       220 ~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          220 EGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             CCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence                234678999999999998432   4799999998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=1.3e-23  Score=188.51  Aligned_cols=209  Identities=9%  Similarity=0.019  Sum_probs=156.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.++....       ...+.++.+|++|++++.+++        .++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~--------~~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVC--------KGAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHH--------TTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHh--------cCCC
Confidence            4899999999999999999999999999999998764321       257899999999999998887        4589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC----------CCccH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP----------LTPLY  160 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~----------~~~~Y  160 (367)
                      +|||+||.....          ...+++|+.++.++++++..    .+.++||++||..+..+.+          ....|
T Consensus        70 ~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWNN----------PDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC----------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            999999864211          13788999999999888754    4567999999987665432          35689


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +.+|.+.+.+.+.++.+   .|++++.++||++.++............  . .+ .......+.+++|+|++++.++  +
T Consensus       136 ~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~--~-~~-~~~~~~~~i~~~Dva~ai~~~l--~  206 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKD--D-MI-VDIVGNSHISVEDYAAAMIDEL--E  206 (227)
T ss_dssp             HHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESS--B-CC-CCTTSCCEEEHHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCC--C-cc-cCCCCCcEEeHHHHHHHHHHHH--h
Confidence            99999999998888753   4899999999999887543211000000  0 00 0000133578999999999999  5


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                      .....|+++.+.+....
T Consensus       207 ~~~~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          207 HPKHHQERFTIGYLEHH  223 (227)
T ss_dssp             SCCCCSEEEEEECCSCC
T ss_pred             CccccCcEEEEEeehhc
Confidence            55678999999876543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=1.7e-23  Score=196.65  Aligned_cols=215  Identities=13%  Similarity=0.035  Sum_probs=160.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|++|++++|+.+......      ...+.++.+|++|.+ +.+++        .. |+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~--------~~-d~   65 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGI--------KG-DV   65 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTC--------CC-SE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhc--------CC-CE
Confidence            6999999999999999999999999999999865432211      346788899999987 65544        33 99


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      |||+||....    ..+.++++..+++|+.++.++++++..    .+.++||++||.+.+..           ..+...|
T Consensus        66 vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y  137 (312)
T 3ko8_A           66 VFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVY  137 (312)
T ss_dssp             EEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             EEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChH
Confidence            9999996432    224456778899999999999998854    34679999999876532           2345789


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc-CC---------CCCCCCHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR-TP---------ICRPGEPDEVS  230 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~p---------~~~~~~~~dvA  230 (367)
                      +.||.+.+.+++.++.++   |++++.++||.+.+|....    .........+... .+         ...+.+++|+|
T Consensus       138 ~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  210 (312)
T 3ko8_A          138 GAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRH----GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV  210 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCS----SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCC----ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence            999999999999999886   8999999999999986432    1111233332222 11         12356699999


Q ss_pred             HHHHHHhCC-CCCCccccEEEeCCCccc
Q 035642          231 SLVAFLCFP-AASYITGQVICVDGGMTV  257 (367)
Q Consensus       231 ~ai~~L~s~-~~~~itG~~i~vdgG~~~  257 (367)
                      +++++++.. ......|+.+++.+|...
T Consensus       211 ~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          211 EATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHHHHHhccccCCCCcEEEEcCCCce
Confidence            999999843 113457899999987643

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=4.7e-23  Score=196.56  Aligned_cols=214  Identities=12%  Similarity=0.041  Sum_probs=159.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .++ +||||||||+||++++++|+++|++|++++|+.+.            .++.++.+|++|.+++.+++        .
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~--------~   76 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI--------M   76 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH--------T
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH--------h
Confidence            344 89999999999999999999999999999998754            35678899999999988877        4


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-------------C
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-------------A  154 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-------------~  154 (367)
                      ++|+|||+|+....      +.+.++..+++|+.++.++++++..    .+.++||++||...+..             .
T Consensus        77 ~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~  146 (347)
T 4id9_A           77 GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTEDHPL  146 (347)
T ss_dssp             TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCC
T ss_pred             CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCCCCCC
Confidence            69999999997543      2334588999999999999998854    45689999999655432             2


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-------------CCcccccc--------CChhhhHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR-------------TSLSDAIR--------HDPAKNKIVEG  213 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~-------------t~~~~~~~--------~~~~~~~~~~~  213 (367)
                      .....|+.+|.+.+.+++.++.+.   |++++.+.|+++.             +|......        .......+...
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 4id9_A          147 CPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQS  223 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHH
Confidence            345689999999999999998874   8999999999998             33211100        01111122223


Q ss_pred             HhhcCC---------CCCC----CCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          214 LVSRTP---------ICRP----GEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       214 ~~~~~p---------~~~~----~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .....+         ...+    .+++|+|++++.++..  ....|+.+++.+|...
T Consensus       224 ~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~--~~~~~~~~ni~~~~~~  278 (347)
T 4id9_A          224 RDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDH--PEAAGGTFNLGADEPA  278 (347)
T ss_dssp             HCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHC--GGGTTEEEEESCSSCE
T ss_pred             HHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcC--cccCCCeEEECCCCcc
Confidence            222222         1234    7899999999999943  3346899999887643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=3.1e-23  Score=195.50  Aligned_cols=219  Identities=13%  Similarity=0.046  Sum_probs=147.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTE---LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~---~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++||||||+|+||++++++|+++|++|++++| +.+.   .... ..+...+.++.++.+|++|++++++++        
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------   72 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAI--------   72 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHH--------
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHH--------
Confidence            48999999999999999999999999999998 6532   1111 111101125788889999999988877        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC----------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL----------  156 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~----------  156 (367)
                      ..+|+|||+|+...   ..  ..+.+++++++|+.|++++++++.+.   .+.++||++||.++..+.+.          
T Consensus        73 ~~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           73 EGCVGIFHTASPID---FA--VSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             TTCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             cCCCEEEEcCCccc---CC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCccc
Confidence            35899999997431   11  11224568999999999999998653   14689999999876543211          


Q ss_pred             -----------C-ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh---cCCCC
Q 035642          157 -----------T-PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS---RTPIC  221 (367)
Q Consensus       157 -----------~-~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~p~~  221 (367)
                                 . ..|+.||.+.+.+++.++.+   .|+++++++||++.||...... .............   ..+..
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~g~~~~~~~~  220 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKL-PDSIEKALVLVLGKKEQIGVT  220 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSC-CHHHHHHTHHHHSCGGGCCEE
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCC-CchHHHHHHHHhCCCccCcCC
Confidence                       1 16999999999988887754   4899999999999999754221 1111101111111   11111


Q ss_pred             --CCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          222 --RPGEPDEVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       222 --~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                        .+++++|+|+++++++..  ...+|+ +++.+
T Consensus       221 ~~~~i~v~Dva~a~~~~~~~--~~~~g~-~~~~~  251 (322)
T 2p4h_X          221 RFHMVHVDDVARAHIYLLEN--SVPGGR-YNCSP  251 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHS--CCCCEE-EECCC
T ss_pred             CcCEEEHHHHHHHHHHHhhC--cCCCCC-EEEcC
Confidence              378999999999999843  335776 44443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=5.9e-23  Score=195.25  Aligned_cols=212  Identities=14%  Similarity=0.015  Sum_probs=154.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +||||||+|+||++++++|+++|++|++++|+.....+.   +.. -.++.++.+|++|+++++++++.      +
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~~~~~~~~Dl~d~~~~~~~~~~------~   88 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD-HPNLTFVEGSIADHALVNQLIGD------L   88 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC-CTTEEEEECCTTCHHHHHHHHHH------H
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh-cCCceEEEEeCCCHHHHHHHHhc------c
Confidence            344 899999999999999999999999999999985432111   110 13688899999999999988864      3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc----CC--------C
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT----AA--------P  155 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~----~~--------~  155 (367)
                      ++|+||||||.....     +.++++  +++|+.++.++++++.+    .+.++||++||.+.+.    ..        .
T Consensus        89 ~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~  157 (333)
T 2q1w_A           89 QPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRN  157 (333)
T ss_dssp             CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCC
T ss_pred             CCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCC
Confidence            699999999976432     223444  89999999999999865    3568999999977653    21        2


Q ss_pred             CC-ccHHHHHHHHHHHHHH-HHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc------CCCCCCCCHH
Q 035642          156 LT-PLYGPYNGAMNQLTKH-LECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR------TPICRPGEPD  227 (367)
Q Consensus       156 ~~-~~Y~asKaal~~l~~~-la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~  227 (367)
                      .. ..|+.+|++++.+++. ++        ++..+.|+.+.+|...    ......+...+...      .+...+.+++
T Consensus       158 p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  225 (333)
T 2q1w_A          158 PANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV----SGPLPIFFQRLSEGKKCFVTKARRDFVFVK  225 (333)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC----SSHHHHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred             CCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc----CcHHHHHHHHHHcCCeeeCCCceEeeEEHH
Confidence            23 7899999999999988 65        5677889888877511    11111122222221      1234567899


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+|++++++++...    |+.+++++|...
T Consensus       226 Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          226 DLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            99999999996432    899999988643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=9.2e-23  Score=200.53  Aligned_cols=218  Identities=11%  Similarity=0.101  Sum_probs=157.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHHHHh---------cCCcEEEEEccCCCHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT---ELNERLQEWKL---------KGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~---~~~~~~~~l~~---------~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      +||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+..         .+.++.++.+|++|++++.    
T Consensus        71 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~----  146 (427)
T 4f6c_A           71 NTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV----  146 (427)
T ss_dssp             EEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC----
T ss_pred             EEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC----
Confidence            8999999999999999999999999999999987   33333333322         1457999999999988877    


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc--c------
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG--V------  151 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~--~------  151 (367)
                          .+ +++|+||||||...       ..+.++..+++|+.|+.++++++.+     +.++||++||...  .      
T Consensus       147 ----~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~~  209 (427)
T 4f6c_A          147 ----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTE  209 (427)
T ss_dssp             ----CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSCS
T ss_pred             ----Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCCC
Confidence                23 78999999999763       2346788899999999999999865     3589999999877  0      


Q ss_pred             ----------cCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh----hhhHHHHHHhhc
Q 035642          152 ----------TAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP----AKNKIVEGLVSR  217 (367)
Q Consensus       152 ----------~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~  217 (367)
                                .+......|+.||.+.+.+++.++.    .|++++.++||.+.++.........    .....+......
T Consensus       210 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (427)
T 4f6c_A          210 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQL  285 (427)
T ss_dssp             CCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHS
T ss_pred             CccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhc
Confidence                      0122567899999999999999764    4899999999999988654321111    111233333332


Q ss_pred             CC--------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          218 TP--------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       218 ~p--------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .+        ...+.+++|+|+++++++....   .|+++++++|...
T Consensus       286 ~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          286 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             SEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             CCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            22        2236789999999999985433   8999999887643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=1.4e-22  Score=196.26  Aligned_cols=217  Identities=17%  Similarity=0.025  Sum_probs=161.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+..+....      ...++.++.+|++|.+++.+++        .++|+
T Consensus        31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~--------~~~d~   96 (379)
T 2c5a_A           31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVT--------EGVDH   96 (379)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHH--------TTCSE
T ss_pred             eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHh--------CCCCE
Confidence            899999999999999999999999999999986543211      1235778899999999988877        36899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------------C
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------------A  153 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------------~  153 (367)
                      |||+||.......   +.++++..+++|+.++.++++++..    .+.++||++||.+.+.                  +
T Consensus        97 Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~  169 (379)
T 2c5a_A           97 VFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWP  169 (379)
T ss_dssp             EEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS
T ss_pred             EEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcccCCC
Confidence            9999997543211   1234678899999999999998854    4567999999976543                  1


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCC----------CCC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTP----------ICR  222 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p----------~~~  222 (367)
                      ......|+.+|.+.+.+++.++.+.   |++++.++||++.++........ .....+...+....+          ...
T Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  246 (379)
T 2c5a_A          170 AEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS  246 (379)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEE
Confidence            2335689999999999999998875   79999999999999865322111 111223333322222          224


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +.+++|+|+++++++...    .|+.+++.+|..
T Consensus       247 ~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~  276 (379)
T 2c5a_A          247 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM  276 (379)
T ss_dssp             CEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             EEEHHHHHHHHHHHhhcc----CCCeEEeCCCCc
Confidence            667999999999998432    467888888754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.90  E-value=3.6e-23  Score=196.57  Aligned_cols=219  Identities=13%  Similarity=0.096  Sum_probs=162.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC---C---CEEEEEeCChhH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGF---G---AIIHTCSRNQTE--LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~---G---~~Vi~~~R~~~~--~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+. .+.++.++.+|++|++++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            5999999999999999999997   8   999999986421  1111 1111 1357889999999999888776     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------  152 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------  152 (367)
                         +++|+|||+||.....    .+.++++..+++|+.++.++++++.+.    +.++||++||.+.+.           
T Consensus        75 ---~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence               5699999999975321    133556788999999999999998764    457999999976542           


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCCC
Q 035642          153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICRP  223 (367)
Q Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~  223 (367)
                      +......|+.||.+.+.+++.++.++   |++++.++||.+.+|....   ...............+         ...+
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHP---EKLIPLFVTNLLDGGTLPLYGDGANVREW  217 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCT---TSHHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCC---CChHHHHHHHHhcCCCcEEeCCCCeeEee
Confidence            22345789999999999999999875   7999999999999986432   1111123333333222         1235


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ..++|+|+++++++...   .+|+.+++++|...
T Consensus       218 i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          218 VHTDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             EEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             EeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            67999999999988432   37899999998643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=2.8e-22  Score=194.67  Aligned_cols=170  Identities=13%  Similarity=0.087  Sum_probs=135.4

Q ss_pred             eEEEEcCCChhHHHHHHHHH-HCCCEEEEEeCChhH---------HHHHHHHHHhc-----CCc---EEEEEccCCCHHH
Q 035642           12 NYFITGGTRGIGHAIVEELA-GFGAIIHTCSRNQTE---------LNERLQEWKLK-----GLK---VTGSVCDLSSREQ   73 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~-~~G~~Vi~~~R~~~~---------~~~~~~~l~~~-----~~~---~~~~~~Dlsd~~s   73 (367)
                      +||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+...     ..+   +.++.+|++|+++
T Consensus         4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   83 (397)
T 1gy8_A            4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (397)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence            79999999999999999999 999999999997654         33333323222     124   8889999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA  153 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~  153 (367)
                      +++++++    + +++|+||||||......    +.++++..+++|+.++.++++++..    .+.++||++||.+.+..
T Consensus        84 ~~~~~~~----~-~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v~g~  150 (397)
T 1gy8_A           84 LNGVFTR----H-GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGN  150 (397)
T ss_dssp             HHHHHHH----S-CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBS
T ss_pred             HHHHHHh----c-CCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHHhCC
Confidence            8888764    3 56999999999754321    3456788999999999999998643    45689999999655432


Q ss_pred             CC------------------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCc
Q 035642          154 AP------------------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSL  197 (367)
Q Consensus       154 ~~------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~  197 (367)
                      ..                  ....|++||++++.+++.++.++   |++++.++||++.++.
T Consensus       151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            21                  15689999999999999999887   8999999999998875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.89  E-value=1.2e-22  Score=196.40  Aligned_cols=222  Identities=10%  Similarity=0.025  Sum_probs=161.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .+++ +||||||+|+||++++++|+++| ++|++++|+.....+.   +. ...++.++.+|++|++++++++       
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~-------   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQ-------   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCC-------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHh-------
Confidence            3455 89999999999999999999999 9999999986542111   11 1357889999999998877765       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCccccc------------
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVT------------  152 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~------------  152 (367)
                       .++|+|||+||.....    .+.++++..+++|+.++.++++++.    +. +.++||++||.+.+.            
T Consensus        98 -~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~  168 (377)
T 2q1s_A           98 -DEYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKATEE  168 (377)
T ss_dssp             -SCCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC--------------CC
T ss_pred             -hCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCcccc
Confidence             4699999999975321    1345678899999999999999873    34 567999999976431            


Q ss_pred             ----CC-CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc---------ccccC-ChhhhHHHHHHhhc
Q 035642          153 ----AA-PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS---------DAIRH-DPAKNKIVEGLVSR  217 (367)
Q Consensus       153 ----~~-~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~---------~~~~~-~~~~~~~~~~~~~~  217 (367)
                          +. .....|+.+|.+.+.+++.++.+.   |++++.++||.+.++..         ..... ......+...+...
T Consensus       169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g  245 (377)
T 2q1s_A          169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKG  245 (377)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTT
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcC
Confidence                11 345689999999999999998875   79999999999999865         11000 11122234444444


Q ss_pred             CCCC---------CCCCHHHHHHH-HHHHhCCCCCCccccEEEeCCCcc
Q 035642          218 TPIC---------RPGEPDEVSSL-VAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       218 ~p~~---------~~~~~~dvA~a-i~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .+..         .+..++|+|++ +++++...  . +| .+++.+|..
T Consensus       246 ~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~--~-~g-~~~i~~~~~  290 (377)
T 2q1s_A          246 MPLPLENGGVATRDFIFVEDVANGLIACAADGT--P-GG-VYNIASGKE  290 (377)
T ss_dssp             CCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCC--T-TE-EEECCCCCC
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcC--C-CC-eEEecCCCc
Confidence            3332         24569999999 99988542  2 78 999988753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=4.1e-22  Score=192.69  Aligned_cols=229  Identities=12%  Similarity=-0.032  Sum_probs=158.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-----LNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-----~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++||||||+|+||++++++|+++|++|++++|+.++     ++.+.+.....+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            589999999999999999999999999999998653     2222222211123 6888999999999999888753   


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccC----------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTA----------  153 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~----------  153 (367)
                         ++|+|||+||.....    .+.++++..+++|+.++.++++++.+...+ .+.++||++||.+.+..          
T Consensus       106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence               589999999975321    134667889999999999999999987643 23469999999875432          


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc----------CCCCCC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR----------TPICRP  223 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----------~p~~~~  223 (367)
                      ......|+.+|.+.+.+++.++.++   |+.+..+.|..+.+|.................+...          .....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            2346789999999999999999876   455555555554444321100000001112222111          112246


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ..++|+|+++++++....    ++.+++.+|..
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  284 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEG  284 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCE
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCC
Confidence            789999999999995432    47888888753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=9.3e-23  Score=191.86  Aligned_cols=211  Identities=14%  Similarity=0.046  Sum_probs=157.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|+.|++..|+....+.       ....+.++.+|+++ +++.+++        .++|+
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~--------~~~d~   66 (313)
T 3ehe_A            3 LIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYL--------KGAEE   66 (313)
T ss_dssp             CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHH--------TTCSE
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHh--------cCCCE
Confidence            69999999999999999999999666555555432211       13468889999999 8887776        46899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------CCCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------AAPLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------~~~~~~~Y  160 (367)
                      |||+|+....    ..+.++++..+++|+.|+.++++++..    .+.++||++||.+.+.           +..+...|
T Consensus        67 vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  138 (313)
T 3ehe_A           67 VWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLY  138 (313)
T ss_dssp             EEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             EEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHH
Confidence            9999996432    224456788999999999999998654    3468999999987652           23345789


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc-C---------CCCCCCCHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR-T---------PICRPGEPDEVS  230 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~---------p~~~~~~~~dvA  230 (367)
                      +.||.+.+.+++.++.++   |++++.+.|+.+.+|....    ......+..+... .         ....+..++|+|
T Consensus       139 ~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  211 (313)
T 3ehe_A          139 GASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTH----GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV  211 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCC----SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCc----ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence            999999999999999885   8999999999999885432    1111122222222 1         122467899999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +++++++.   ....|+.+++.+|..
T Consensus       212 ~a~~~~~~---~~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          212 DAMLFGLR---GDERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHTT---CCSSEEEEECCCSCC
T ss_pred             HHHHHHhc---cCCCCceEEECCCCC
Confidence            99999995   334688999988754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=3.4e-22  Score=190.06  Aligned_cols=219  Identities=15%  Similarity=0.093  Sum_probs=160.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.++.+...     ...++.++.+|++|. +.++++++        ++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~~   68 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------KC   68 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------HC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------CC
Confidence            6999999999999999999998 899999999876543221     134688999999984 55666653        47


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC-------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL-------------  156 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~-------------  156 (367)
                      |+|||+||...+..    ..++++..+++|+.++.++++++.+    .+ ++||++||.+.+....+             
T Consensus        69 d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~  139 (345)
T 2bll_A           69 DVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (345)
T ss_dssp             SEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             CEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccC
Confidence            99999999754221    2345677899999999999998854    34 79999999765432111             


Q ss_pred             -----CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-----CChhhhHHHHHHhhcCCC------
Q 035642          157 -----TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-----HDPAKNKIVEGLVSRTPI------  220 (367)
Q Consensus       157 -----~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~p~------  220 (367)
                           ...|+.+|.+.+.+++.++.+.   |++++.++||.+.++......     .......++..+....+.      
T Consensus       140 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  216 (345)
T 2bll_A          140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  216 (345)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred             cccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCC
Confidence                 1279999999999999998775   799999999999988653211     011112233333333221      


Q ss_pred             ---CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          221 ---CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       221 ---~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                         ..+.+++|+|+++++++.......+|+.+++.+|.
T Consensus       217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence               23678999999999998544334679999999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.89  E-value=7.8e-23  Score=236.00  Aligned_cols=179  Identities=21%  Similarity=0.303  Sum_probs=142.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHH---HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTEL---NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~---~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++..+++|||||++|||+++|+.|+++|++ |++++|+..+.   .+..+++...+.++.++.||++|.++++++++++.
T Consensus      1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence            344559999999999999999999999996 88899986443   44556666667889999999999999999999987


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      + + +++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.|.+  .|+||++||.++..+.+++.+|++
T Consensus      1961 ~-~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~a 2036 (2512)
T 2vz8_A         1961 Q-L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGF 2036 (2512)
T ss_dssp             H-H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHH
T ss_pred             h-c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHH
Confidence            4 6 89999999999987788889999999999999999999999999998754  389999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVI  193 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v  193 (367)
                      ||+++++|++.++.+    |+...++.+|.+
T Consensus      2037 aKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            999999999988765    777778887765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.89  E-value=1.1e-23  Score=200.17  Aligned_cols=220  Identities=14%  Similarity=0.086  Sum_probs=147.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER--LQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~--~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .++||||||+|+||++++++|+++|++|+++.|+.++....  ...+. ...++.++.+|++|++++.+++        .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--------~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPI--------A   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHH--------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHH--------c
Confidence            34899999999999999999999999999999986542211  12232 2346888999999998888776        3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------------
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------------  154 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------------  154 (367)
                      ++|+|||+|+.....     ..+..++.+++|+.|+.++++++.+..   +.++||++||.++..+.             
T Consensus        80 ~~D~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           80 GCDFVFHVATPVHFA-----SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CCCEEEEeCCccCCC-----CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            589999999964211     122234588999999999999987532   36899999998743210             


Q ss_pred             --------C---CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh--------
Q 035642          155 --------P---LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV--------  215 (367)
Q Consensus       155 --------~---~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~--------  215 (367)
                              +   ....|+.||.+.+.+++.++.+.   |+++++++||.+.+|....... ...........        
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~~~  227 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVP-SSIGLAMSLITGNEFLING  227 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCC-HHHHHHHHHHHTCHHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCcccccc
Confidence                    0   01159999999999999887653   8999999999999996543211 11000000000        


Q ss_pred             -hc--CCCC--CCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          216 -SR--TPIC--RPGEPDEVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       216 -~~--~p~~--~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                       ..  .+.+  .+.+++|+|++++++++.  ...+|.. ++.+
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~--~~~~~~~-~~~~  267 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEK--ESASGRY-ICCA  267 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHC--TTCCEEE-EECS
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcC--CCcCCcE-EEec
Confidence             00  0001  377999999999999843  3345654 4433

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=7.6e-22  Score=190.37  Aligned_cols=227  Identities=12%  Similarity=-0.029  Sum_probs=157.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-----LNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-----~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++||||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.... .+.++.++.+|++|++++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            589999999999999999999999999999998543     2221111110 1346888999999999999888753   


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------  153 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------  153 (367)
                         ++|+|||+||.....    .+.++++..+++|+.++.++++++.+... .+.++||++||.+.+..           
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccCC
Confidence               589999999975321    13456788999999999999999977542 12379999999876542           


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-C---------CCCC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-P---------ICRP  223 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-p---------~~~~  223 (367)
                      ......|+.||++++.+++.++.++   ++.+..+.|+.+.+|..............+..+.... +         ...+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence            1235689999999999999999875   6888888888877764321100000111222222221 1         1135


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ..++|+|++++.++....    ++.+++.+|.
T Consensus       251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  278 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE----PEDFVIATGE  278 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             EEHHHHHHHHHHHHhcCC----CceEEEeCCC
Confidence            679999999999884321    3567776664

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=1.6e-21  Score=187.59  Aligned_cols=226  Identities=13%  Similarity=0.017  Sum_probs=153.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN-ERLQEWKL----KGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~-~~~~~l~~----~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++|||||+|+||++++++|+++|++|++++|+.+... +..+.+..    .+.++.++.+|++|++++.++++..     
T Consensus         3 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   77 (372)
T 1db3_A            3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----   77 (372)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-----
Confidence            7999999999999999999999999999999865421 11112111    1357888999999999999988753     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------C
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------P  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~  155 (367)
                       ++|+||||||.....    .+.++++..+++|+.++.++++++.+...+ +.++||++||.+.+...           .
T Consensus        78 -~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~~  151 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFY  151 (372)
T ss_dssp             -CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCCC
T ss_pred             -CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCCC
Confidence             589999999975432    133456788999999999999999775422 23899999998665321           2


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-C---------CCCCCC
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-P---------ICRPGE  225 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-p---------~~~~~~  225 (367)
                      +...|+.||++++.+++.++.++   |+.+..+.|..+.+|..............+..+.... +         ...+..
T Consensus       152 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  228 (372)
T 1db3_A          152 PRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (372)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence            35689999999999999999886   5666677776666554221000001111222222221 1         113678


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          226 PDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       226 ~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++|+|++++.++..  .  .++.+++.+|.
T Consensus       229 v~Dva~a~~~~~~~--~--~~~~~ni~~~~  254 (372)
T 1db3_A          229 AKDYVKMQWMMLQQ--E--QPEDFVIATGV  254 (372)
T ss_dssp             HHHHHHHHHHTTSS--S--SCCCEEECCCC
T ss_pred             HHHHHHHHHHHHhc--C--CCceEEEcCCC
Confidence            99999999988843  2  14677777664

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=7e-22  Score=188.05  Aligned_cols=223  Identities=17%  Similarity=0.143  Sum_probs=155.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFG-------AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G-------~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +.+++ +||||||+|+||++++++|+++|       ++|++++|+.++...      ..+.++.++.+|++|++++++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHH
Confidence            45666 89999999999999999999999       899999998643221      12457888999999999988887


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCC-C-
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAA-P-  155 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~-~-  155 (367)
                      +       +++|+|||+||....     .+.++++..+++|+.|+.++++++.+...+. +.++||++||.+.+... + 
T Consensus        84 ~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           84 E-------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             H-------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             h-------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence            5       469999999997531     1356788999999999999999987754221 25899999998765432 1 


Q ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhC--CCCeEEEEEe--cCcccCCccccccCChhhhHHHHHHhhcC----
Q 035642          156 ---------LTPLYGPYNGAMNQLTKHLECEQA--KDNIRANSIA--PGVIRTSLSDAIRHDPAKNKIVEGLVSRT----  218 (367)
Q Consensus       156 ---------~~~~Y~asKaal~~l~~~la~e~~--~~gIrvn~I~--PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----  218 (367)
                               +...|++||++++.+++.++.+..  ...+|++.+.  ||.+.++...      .............    
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~------~~~~~~~~~~~~~~~~~  225 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG------FFSNILREPLVGQEAVL  225 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG------HHHHHHHHHHTTCCEEE
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH------HHHHHHHHHhcCCCeec
Confidence                     467899999999999999987631  1124555554  5554433211      1111222222222    


Q ss_pred             CCCC-----CCCHHHHHHHHHHHhCCCCC-CccccEEEeCC
Q 035642          219 PICR-----PGEPDEVSSLVAFLCFPAAS-YITGQVICVDG  253 (367)
Q Consensus       219 p~~~-----~~~~~dvA~ai~~L~s~~~~-~itG~~i~vdg  253 (367)
                      |.+.     +.+++|+|++++.++..... ...|+.+++.|
T Consensus       226 ~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          226 PVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             cCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            2221     46899999999998832211 01466777743

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=7.1e-22  Score=176.66  Aligned_cols=199  Identities=17%  Similarity=0.106  Sum_probs=142.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|++|++++|+.+++..+.      ...+.++.+|++|+++  +.       + +++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~--~~-------~-~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE--AD-------L-DSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH--HH-------H-TTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH--hh-------c-ccCCE
Confidence            5999999999999999999999999999999987765331      3467889999999887  22       2 67999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC--------------C
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL--------------T  157 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~--------------~  157 (367)
                      ||||||......           ...+|+.++.++++++    ++.+ +++|++||.++..+.+.              .
T Consensus        66 vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           66 VVDALSVPWGSG-----------RGYLHLDFATHLVSLL----RNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEECCCCCTTSS-----------CTHHHHHHHHHHHHTC----TTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEECCccCCCcc-----------hhhHHHHHHHHHHHHH----HHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999862211           1356777776665554    5556 99999999877665444              5


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ..|+.+|.+.+.+ .   ......|++++.++||++.++.....   ...  ....+........+.+++|+|++++.++
T Consensus       130 ~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~--~~~~~~~~~~~~~~i~~~DvA~~~~~~l  200 (224)
T 3h2s_A          130 PWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATS---YVA--GKDTLLVGEDGQSHITTGNMALAILDQL  200 (224)
T ss_dssp             TTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCC---EEE--ESSBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccC---cee--cccccccCCCCCceEeHHHHHHHHHHHh
Confidence            7899999999854 2   22235689999999999998732111   000  0000000111235789999999999999


Q ss_pred             CCCCCCccccEEEeCC
Q 035642          238 FPAASYITGQVICVDG  253 (367)
Q Consensus       238 s~~~~~itG~~i~vdg  253 (367)
                      .  .....|+++.+.|
T Consensus       201 ~--~~~~~g~~~~~~~  214 (224)
T 3h2s_A          201 E--HPTAIRDRIVVRD  214 (224)
T ss_dssp             H--SCCCTTSEEEEEE
T ss_pred             c--CccccCCEEEEec
Confidence            4  4455789988755

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=1e-21  Score=186.31  Aligned_cols=225  Identities=13%  Similarity=-0.004  Sum_probs=158.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN-ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~-~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .++||||||+|+||++++++|+++|++|++++|+.++.. ...+.+. .+.++.++.+|++|++++.++++..      +
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~   86 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------Q   86 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------C
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------C
Confidence            348999999999999999999999999999999865421 1111111 1346888999999999999888653      5


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccCCC-----------C
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTAAP-----------L  156 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~~~-----------~  156 (367)
                      +|+|||+||......    +.++++..+++|+.++.++++++.+.    + .++||++||.+.+....           .
T Consensus        87 ~d~Vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p  158 (335)
T 1rpn_A           87 PQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYP  158 (335)
T ss_dssp             CSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CCEEEECccccchhh----hhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCCC
Confidence            899999999653210    12346788999999999999998653    3 37999999976653322           2


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-C---C------CCCCCH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-P---I------CRPGEP  226 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-p---~------~~~~~~  226 (367)
                      ...|+.||.+.+.+++.++.++   |+++..+.|+.+.+|..............+..+.... +   .      ..+..+
T Consensus       159 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v  235 (335)
T 1rpn_A          159 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  235 (335)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             CChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEH
Confidence            4579999999999999998875   6888889999888875321110011111222222221 1   1      125678


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          227 DEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|+|++++.++....    ++.+++.+|..
T Consensus       236 ~Dva~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          236 GDYVEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             HHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence            999999999884322    46788877653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=1.8e-22  Score=185.87  Aligned_cols=191  Identities=18%  Similarity=0.189  Sum_probs=146.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+|+||++++++|+++|++|++++|+.++..         ...+.++.+|++|++++.+++        .++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLV--------KDCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHH--------TTCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHH--------cCCC
Confidence            37999999999999999999999999999999875311         135788889999999988877        3589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC------------CCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP------------LTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~------------~~~  158 (367)
                      +||||||...        .+.++..+++|+.++.++++++.+    .+.++||++||...+...+            ...
T Consensus        66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999752        123578899999999999998864    4568999999987654322            347


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR-TSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .|+.||++++.+++.++.+   .|++++.++||++. ++.      ...   .         ...+.+++|+|++++.++
T Consensus       134 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~------~~~---~---------~~~~~~~~dva~~~~~~~  192 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK------DAR---M---------MATWLSVDDFMRLMKRAF  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC------SHH---H---------HHHBCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC------CCC---e---------eeccccHHHHHHHHHHHH
Confidence            8999999999999988653   58999999999984 331      100   0         112468999999999988


Q ss_pred             CCCCCCccccEEEeCC
Q 035642          238 FPAASYITGQVICVDG  253 (367)
Q Consensus       238 s~~~~~itG~~i~vdg  253 (367)
                      ..  ....+..+.+.+
T Consensus       193 ~~--~~~~~~~~~~~~  206 (267)
T 3ay3_A          193 VA--PKLGCTVVYGAS  206 (267)
T ss_dssp             HS--SCCCEEEEEECC
T ss_pred             hC--CCCCceeEecCC
Confidence            43  222344555543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=2.4e-21  Score=184.01  Aligned_cols=228  Identities=12%  Similarity=0.043  Sum_probs=154.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++.+|++|+++++++++.      .++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCCC
Confidence            699999999999999999999999999998643211111122221 144677889999999999888764      2599


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------C-CCCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------A-PLTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~-~~~~  158 (367)
                      +||||||......    ..++.+..+++|+.|+.++++++..    .+.++||++||.+.+..           . +...
T Consensus        76 ~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~  147 (338)
T 1udb_A           76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred             EEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCC
Confidence            9999999753221    2344567899999999999987643    34689999999765421           1 2366


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-------CChhhhHHHHHHh-hcCC-----------
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-------HDPAKNKIVEGLV-SRTP-----------  219 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-------~~~~~~~~~~~~~-~~~p-----------  219 (367)
                      .|++||++++.+++.++.+.  .|+++..+.|+.+.++......       ............. ...+           
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  225 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence            89999999999999999874  3799999999877765321100       0101111111111 1111           


Q ss_pred             ----CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          220 ----ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       220 ----~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                          ...+.+++|+|++++.++........++.+++.+|.
T Consensus       226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence                113567999999998877321112234788887664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.88  E-value=2.7e-21  Score=181.82  Aligned_cols=208  Identities=13%  Similarity=0.063  Sum_probs=156.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||||+||++++++|+++|++|++++|+....+     +.    ++.++.+|++ .+++.+++        .++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~--------~~~d   64 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQL--------NDVD   64 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--------TTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhh--------cCCC
Confidence            48999999999999999999999999999999944322     11    5778999999 98888776        4699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPL  159 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~  159 (367)
                      +|||+||.....        +.+..+++|+.++.++++++..    .+.++||++||...+...           .....
T Consensus        65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (311)
T 3m2p_A           65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLM  132 (311)
T ss_dssp             EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSH
T ss_pred             EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCch
Confidence            999999986543        3346788999999999998854    456799999996654321           23468


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---------CCCCCHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---------CRPGEPDEVS  230 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dvA  230 (367)
                      |+.+|.+.+.+++.++.+   .|++++.+.||.+.++.....   .....+...+....+.         ..+..++|+|
T Consensus       133 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva  206 (311)
T 3m2p_A          133 YGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN---YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA  206 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C---CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC---CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence            999999999999999876   489999999999998865421   1122233433333221         1356799999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++.++....   .|+.+++.+|...
T Consensus       207 ~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          207 KSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHHHHhcCC---CCCeEEeCCCCcc
Confidence            99999985432   7889999887643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=2.2e-21  Score=183.54  Aligned_cols=222  Identities=13%  Similarity=0.047  Sum_probs=158.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||+|+||++++++|+++|++|++++|+.....   +.+   ..++.++.+|++|++++++++++      .++|+
T Consensus         3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~------~~~d~   70 (330)
T 2c20_A            3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ------ENIEA   70 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH------SCEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh------cCCCE
Confidence            7999999999999999999999999999998754321   111   22577889999999999888764      37999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      |||+||......    +.++++..+++|+.++.++++++..    .+.++||++||.+.+...           .....|
T Consensus        71 vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y  142 (330)
T 2c20_A           71 VMHFAADSLVGV----SMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTY  142 (330)
T ss_dssp             EEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHH
T ss_pred             EEECCcccCccc----cccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChH
Confidence            999999753221    3456788999999999999998743    456899999997665321           235789


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc------CChhhhHHHHHHhhcC-C-----------C--
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR------HDPAKNKIVEGLVSRT-P-----------I--  220 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~-p-----------~--  220 (367)
                      +.||.+.+.+++.++.++   |++++.+.||.+.++......      ................ +           .  
T Consensus       143 ~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  219 (330)
T 2c20_A          143 GETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGT  219 (330)
T ss_dssp             HHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCc
Confidence            999999999999998764   899999999999887532111      0111111222111111 1           1  


Q ss_pred             --CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          221 --CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       221 --~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                        ..+..++|+|++++.++........|+.+++.+|..
T Consensus       220 ~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          220 CIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             eeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence              134679999999998874221112367888877643

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=7e-22  Score=190.33  Aligned_cols=217  Identities=15%  Similarity=0.107  Sum_probs=162.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS-SREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dls-d~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.++.....+     ..++.++.+|++ |.+++.++++        ++
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~--------~~   92 (372)
T 3slg_A           26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK--------KC   92 (372)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH--------HC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc--------cC
Confidence            8999999999999999999998 9999999999765433211     347899999999 9999988875        48


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC---------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA---------------  154 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~---------------  154 (367)
                      |+|||+||......    ..++....+++|+.++.++++++...    + +++|++||.+.+...               
T Consensus        93 d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~  163 (372)
T 3slg_A           93 DVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDASALTYG  163 (372)
T ss_dssp             SEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTTCCEEEC
T ss_pred             CEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCccccccccC
Confidence            99999999764321    23456678899999999999988653    3 799999996544321               


Q ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-----CChhhhHHHHHHhhcCCC------
Q 035642          155 ---PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-----HDPAKNKIVEGLVSRTPI------  220 (367)
Q Consensus       155 ---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~p~------  220 (367)
                         .....|+.||.+.+.+++.++.+    |++++.+.|+.+.+|......     .......+...+....+.      
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  239 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGG  239 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGG
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCC
Confidence               12237999999999999998855    899999999999988654211     111122233333333322      


Q ss_pred             ---CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          221 ---CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       221 ---~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                         ..+..++|+|++++.++........|+++++.++
T Consensus       240 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~  276 (372)
T 3slg_A          240 SQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNP  276 (372)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             ceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCC
Confidence               1356899999999999954443368999999983

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=8.4e-22  Score=185.38  Aligned_cols=209  Identities=14%  Similarity=0.130  Sum_probs=125.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||||+||++++++|+++|++|++++|+.+.           + +  ++.+|++|++++.++++..      ++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~d   62 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QPH   62 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CCC
Confidence            489999999999999999999999999999987543           1 1  6778999999988888643      589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------CCCCccH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------APLTPLY  160 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------~~~~~~Y  160 (367)
                      +|||+||.....    .+.++++..+++|+.++.++++++.+.    + ++||++||.+.+.+          ..+...|
T Consensus        63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             EEEECC-----------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            999999975432    245678889999999999999999763    2 49999999887544          3446789


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHh-hc-------CCCCCCCCHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV-SR-------TPICRPGEPDEVSSL  232 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~-------~p~~~~~~~~dvA~a  232 (367)
                      +.+|.+++.+++.++.       ++..+.|+.+.++........  ......... ..       .+...+.+++|+|++
T Consensus       134 ~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  204 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESA--VTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATV  204 (315)
T ss_dssp             HHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGST--TGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccH--HHHHHHHHHhcCCCeeeccCceECcEEHHHHHHH
Confidence            9999999999998742       235667776665543210000  000122221 11       233467889999999


Q ss_pred             HHHHhCCC-CCCccccEEEeCCCccc
Q 035642          233 VAFLCFPA-ASYITGQVICVDGGMTV  257 (367)
Q Consensus       233 i~~L~s~~-~~~itG~~i~vdgG~~~  257 (367)
                      +++++... .....|+.+++++|...
T Consensus       205 ~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          205 CRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHHHhhccccCCCCeEEEcCCCcc
Confidence            99988532 12346889999887643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=2e-21  Score=173.03  Aligned_cols=203  Identities=15%  Similarity=0.117  Sum_probs=135.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|++|++++|+.++++...       ..+.++.+|++|+++  +.       + +++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~-------~-~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SD-------L-SDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HH-------H-TTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hh-------h-cCCCE
Confidence            5999999999999999999999999999999987755432       457889999999887  22       2 57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC------------Ccc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL------------TPL  159 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~------------~~~  159 (367)
                      ||||||....             ....|+.++.+++++    +++.+.+++|++||..+..+.++            ...
T Consensus        65 vi~~ag~~~~-------------~~~~~~~~~~~l~~a----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           65 VVDAYGISPD-------------EAEKHVTSLDHLISV----LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             EEECCCSSTT-------------TTTSHHHHHHHHHHH----HCSCCSSEEEEECCCC-------------------CCC
T ss_pred             EEECCcCCcc-------------ccchHHHHHHHHHHH----HHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            9999997422             134566666666555    45566799999999887654332            456


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |+.+|.+.+.+. .+..  ...|++++.++||++.++....  .....  ....+........+.+++|+|++++.++  
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~--~~~~~--~~~~~~~~~~~~~~i~~~Dva~~~~~~l--  198 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERT--GDYQI--GKDHLLFGSDGNSFISMEDYAIAVLDEI--  198 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCcc--CceEe--ccccceecCCCCceEeHHHHHHHHHHHH--
Confidence            999999998873 2221  1468999999999999872111  00000  0000000011124778999999999999  


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      +.....|+++.+.|....
T Consensus       199 ~~~~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          199 ERPNHLNEHFTVAGKLEH  216 (221)
T ss_dssp             HSCSCTTSEEECCC----
T ss_pred             hCccccCCEEEECCCCcc
Confidence            445567999998876544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=4.6e-22  Score=190.62  Aligned_cols=220  Identities=12%  Similarity=0.071  Sum_probs=156.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++ +||||||+|+||++++++|+++| ++|++++|+.....  .+.+.  +  +. +.+|++|.++++++++.  ..+ 
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~--~~-~~~d~~~~~~~~~~~~~--~~~-  113 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--D--LN-IADYMDKEDFLIQIMAG--EEF-  113 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--T--SC-CSEEEEHHHHHHHHHTT--CCC-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--C--ce-EeeecCcHHHHHHHHhh--ccc-
Confidence            344 89999999999999999999999 89999999865421  01111  1  22 56799999888887753  123 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----------  155 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----------  155 (367)
                      +++|+|||+||....      +.++++..+++|+.++.++++++.+.    +. +||++||.+.+...+           
T Consensus       114 ~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          114 GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            479999999997643      22346788999999999999998763    34 899999987654332           


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHhhcCC----------CCCCC
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRTP----------ICRPG  224 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~p----------~~~~~  224 (367)
                      ....|+.+|.+.+.+++.++.+   .|++++.++||++.+|....... ......+...+....+          ...+.
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  259 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  259 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccE
Confidence            2568999999999999998865   38999999999999885431100 1111122233322221          22457


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +++|+|+++++++....    |+.+++++|..
T Consensus       260 ~v~Dva~ai~~~~~~~~----~~~~~i~~~~~  287 (357)
T 2x6t_A          260 YVGDVADVNLWFLENGV----SGIFNLGTGRA  287 (357)
T ss_dssp             EHHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             EHHHHHHHHHHHHhcCC----CCeEEecCCCc
Confidence            89999999999984322    88999988754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=3.2e-21  Score=180.85  Aligned_cols=217  Identities=15%  Similarity=0.078  Sum_probs=156.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++|||||+|+||++++++|+++  |++|++++|+..+.+ .    ..   ++.++.+|++|++++.+++++      .+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~~---~~~~~~~D~~d~~~~~~~~~~------~~   68 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----VN---SGPFEVVNALDFNQIEHLVEV------HK   68 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----HH---SSCEEECCTTCHHHHHHHHHH------TT
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----cC---CCceEEecCCCHHHHHHHHhh------cC
Confidence            47999999999999999999999  899999999875521 1    11   355788999999999888864      26


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------CC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------PL  156 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------~~  156 (367)
                      +|+|||+||.....     ..++++..+++|+.++.++++++.+    .+.++||++||.+.+...            ..
T Consensus        69 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~  139 (312)
T 2yy7_A           69 ITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEP  139 (312)
T ss_dssp             CCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCC
T ss_pred             CCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCC
Confidence            89999999964321     2355778899999999999998854    456799999998765431            22


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--ChhhhHHHHHHhhcC--------CCCCCCCH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--DPAKNKIVEGLVSRT--------PICRPGEP  226 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~--------p~~~~~~~  226 (367)
                      ...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.......  ......+...+....        ....+..+
T Consensus       140 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  216 (312)
T 2yy7_A          140 STVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYM  216 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEH
T ss_pred             CchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeH
Confidence            5689999999999999998775   7999999999998875322111  111111122221111        11124578


Q ss_pred             HHHHHHHHHHhCCCCCCc-cccEEEeCC
Q 035642          227 DEVSSLVAFLCFPAASYI-TGQVICVDG  253 (367)
Q Consensus       227 ~dvA~ai~~L~s~~~~~i-tG~~i~vdg  253 (367)
                      +|+|++++.++....... .|+.+++.|
T Consensus       217 ~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          217 DDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHhCcccccccCceEEeCC
Confidence            999999999884332222 257888865

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.86  E-value=2.2e-21  Score=184.76  Aligned_cols=237  Identities=19%  Similarity=0.098  Sum_probs=170.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCEEEEEeCChh------------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELA-GFGAIIHTCSRNQT------------ELNERLQEWKLKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~-~~G~~Vi~~~R~~~------------~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      |+|||||||+|||++++..|+ +.|+.|+++.+..+            ......+.+++.|.+...+.||++++++++++
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v  130 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV  130 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence            499999999999999999999 78999999887643            23445566777799999999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCC-------------CCc---------------------cCCCHHHHH---HhHHHhh
Q 035642           78 METVSSIFQGKLNLLVNNAAVAVP-------------KEA---------------------LDTTAEYMS---TLRSTNF  120 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag~~~~-------------~~~---------------------~~~~~e~~~---~~~~vNv  120 (367)
                      ++++.+++ |++|+||||++....             +++                     ...+.++++   ..|....
T Consensus       131 i~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~  209 (401)
T 4ggo_A          131 IEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGED  209 (401)
T ss_dssp             HHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhH
Confidence            99999999 999999999997521             011                     112344444   4445556


Q ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC--CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcc
Q 035642          121 ESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP--LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLS  198 (367)
Q Consensus       121 ~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~--~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~  198 (367)
                      .+.|...+...+.|.  ++++++.+|+..+....|  +...++++|++++..++.|+.++++  +++|+++||.+.|.-.
T Consensus       210 ~s~w~~al~~a~lla--~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          210 WERWIKQLSKEGLLE--EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             HHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCTTG
T ss_pred             HHHHHHHHHhhhccc--CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccchh
Confidence            666777777666663  368999999988865544  4458999999999999999999974  8999999999999877


Q ss_pred             ccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          199 DAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ..++.-+---..+...+     +..++-|.+.+.+..|+.+ .-|-++..+.+|+.-.++
T Consensus       286 saIP~~ply~~~l~kvm-----k~~g~heg~ieq~~rl~~~-~ly~~~~~~~~D~~~r~r  339 (401)
T 4ggo_A          286 AVIPVIPLYLASLFKVM-----KEKGNHEGCIEQITRLYAE-RLYRKDGTIPVDEENRIR  339 (401)
T ss_dssp             GGSSSHHHHHHHHHHHH-----HHHTCCCCHHHHHHHHHHH-TTSCTTCCCCCCTTSCEE
T ss_pred             hcCCCchHHHHHHHHHH-----HhcCCCCchHHHHHHHHHH-hhccCCCCCCcCCCCCcc
Confidence            76654332111122221     2233446777877777743 223233344566644443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.85  E-value=5.2e-21  Score=177.99  Aligned_cols=193  Identities=16%  Similarity=0.113  Sum_probs=147.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||+|+||++++++|+++|++|++++|+                     .+|++|++++.++++..      ++|
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~~d   65 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------KPN   65 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------CCS
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------CCC
Confidence            389999999999999999999999999999996                     26999999998888643      589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----------CCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----------LTPL  159 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----------~~~~  159 (367)
                      +|||+||....    +.+.++++..+++|+.++.++++++.+.    +. +||++||.+.+.+..           ....
T Consensus        66 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~  136 (292)
T 1vl0_A           66 VVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----GA-EIVQISTDYVFDGEAKEPITEFDEVNPQSA  136 (292)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEechHHeECCCCCCCCCCCCCCCCccH
Confidence            99999997532    1134667889999999999999998763    33 999999986654322           3568


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcC-------CCCCCCCHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT-------PICRPGEPDEVSSL  232 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~dvA~a  232 (367)
                      |+.+|.+.+.+++.++.       +++.+.|+.+.++ ...     .............       ....+..++|+|++
T Consensus       137 Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  203 (292)
T 1vl0_A          137 YGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNN-----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARV  203 (292)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSC-----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcC-----hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHH
Confidence            99999999999988742       3678999999877 211     1111222222222       12456789999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCcc
Q 035642          233 VAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ++++++..    .|+.+++++|..
T Consensus       204 ~~~~~~~~----~~~~~~i~~~~~  223 (292)
T 1vl0_A          204 VLKVIDEK----NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHT----CCEEEECCCBSC
T ss_pred             HHHHHhcC----CCcEEEecCCCC
Confidence            99998542    688999988753

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.85  E-value=8.3e-21  Score=196.71  Aligned_cols=219  Identities=14%  Similarity=0.095  Sum_probs=161.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ-REKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++ |++|++++|+.++.+...     ...++.++.+|++|.++ ++++++        ++
T Consensus       317 ~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~--------~~  383 (660)
T 1z7e_A          317 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------KC  383 (660)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH--------HC
T ss_pred             eEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc--------CC
Confidence            8999999999999999999998 899999999876543211     13468899999998764 555553        48


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC--------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP--------------  155 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~--------------  155 (367)
                      |+|||+||......    ..++++..+++|+.|+.++++++.+    .+ +++|++||.+.+....              
T Consensus       384 D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T 1z7e_A          384 DVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  454 (660)
T ss_dssp             SEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEEC
T ss_pred             CEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccccccC
Confidence            99999999754321    2345678899999999999998864    33 7999999976653211              


Q ss_pred             ----CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccc-----cCChhhhHHHHHHhhcCCC------
Q 035642          156 ----LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI-----RHDPAKNKIVEGLVSRTPI------  220 (367)
Q Consensus       156 ----~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~p~------  220 (367)
                          ....|+.||.+.+.+++.++.+.   |++++.++||.+.++.....     ........+...+....+.      
T Consensus       455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g  531 (660)
T 1z7e_A          455 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  531 (660)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGG
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCC
Confidence                12369999999999999998775   79999999999998865321     0111112233333333332      


Q ss_pred             ---CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          221 ---CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       221 ---~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                         ..+.+++|+|+++++++.......+|+.+++++|.
T Consensus       532 ~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence               13567999999999998654444689999999874

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=9.6e-21  Score=177.29  Aligned_cols=217  Identities=13%  Similarity=0.077  Sum_probs=152.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+.  +..   +.+|+++.++++++++...  + +++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~---~~~d~~~~~~~~~~~~~~~--~-~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN---IADYMDKEDFLIQIMAGEE--F-GDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH--TSC---CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC--cce---eccccccHHHHHHHHhccc--c-CCCc
Confidence            48999999999999999999999 89999999865421  11121  112   5679999888887764110  1 2699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----------CCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----------LTPL  159 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----------~~~~  159 (367)
                      +|||+||....      +.++++..+++|+.++.++++++.+.    +. ++|++||.+.+....           ....
T Consensus        71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997643      12345778999999999999998653    34 899999986543222           2457


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-ChhhhHHHHHHhhcC---------C-CCCCCCHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-DPAKNKIVEGLVSRT---------P-ICRPGEPDE  228 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~---------p-~~~~~~~~d  228 (367)
                      |+.+|.+.+.+++.++.+   .|++++.++||++.+|....... ..........+....         . ...+..++|
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            999999999999998765   48999999999999886432110 011111222222211         1 224567999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|++++.++...  .  |+.+++.+|..
T Consensus       217 va~~~~~~~~~~--~--~~~~~i~~~~~  240 (310)
T 1eq2_A          217 VADVNLWFLENG--V--SGIFNLGTGRA  240 (310)
T ss_dssp             HHHHHHHHHHHC--C--CEEEEESCSCC
T ss_pred             HHHHHHHHHhcC--C--CCeEEEeCCCc
Confidence            999999988432  2  78999987753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.85  E-value=1.2e-20  Score=179.71  Aligned_cols=217  Identities=10%  Similarity=0.044  Sum_probs=151.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ +||||||+|+||++++++|+++|++|++++|+........+.+. ...++.++.+|+++..            + .
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~-~   90 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y-I   90 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-C
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-c
Confidence            344 89999999999999999999999999999997532111111111 1346888999998752            3 5


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc---------------
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT---------------  152 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~---------------  152 (367)
                      ++|+|||+||.......    .++++..+++|+.++.++++++.+.    + .++|++||.+.+.               
T Consensus        91 ~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~  161 (343)
T 2b69_A           91 EVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHV  161 (343)
T ss_dssp             CCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred             CCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccccC
Confidence            79999999997542211    1234678899999999999988653    2 4899999976542               


Q ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCC
Q 035642          153 -AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICR  222 (367)
Q Consensus       153 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~  222 (367)
                       +......|+.||.+.+.+++.++.+.   |++++.++||.+.+|...... ......+........+         ...
T Consensus       162 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (343)
T 2b69_A          162 NPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMND-GRVVSNFILQALQGEPLTVYGSGSQTRA  237 (343)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTC-CCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCc-ccHHHHHHHHHHcCCCceEcCCCCeEEe
Confidence             12234579999999999999998775   799999999999998643211 1111123333333222         123


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          223 PGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +..++|+|++++.++...    .|+.+++.+|..
T Consensus       238 ~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          238 FQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             CEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             eEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence            568999999999998532    266788887753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=1.7e-20  Score=176.44  Aligned_cols=214  Identities=13%  Similarity=0.058  Sum_probs=152.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||+|+||++++++|+++  |++|++++|+....+           .+.++.+|++|++++.+++++      .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence            4899999999999999999998  899999998764321           345788999999999888864      369


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------CCC
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------PLT  157 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------~~~  157 (367)
                      |+|||+||.....     ..++++..+++|+.++.++++++.+    .+.++||++||.+.+.+.            ...
T Consensus        64 d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSAK-----GEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCCc-----cccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999999974321     2355678899999999999998854    456799999998765432            135


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--ChhhhHHHHHHhhcC---C-----CCCCCCHH
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--DPAKNKIVEGLVSRT---P-----ICRPGEPD  227 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~---p-----~~~~~~~~  227 (367)
                      ..|+.||.+.+.+++.++.+.   |++++.+.|+.+.++.......  ......+...+....   +     ...+..++
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            689999999999999988764   7999999987776643211111  111111112221111   0     11235689


Q ss_pred             HHHHHHHHHhCCC-CCCccccEEEeCCC
Q 035642          228 EVSSLVAFLCFPA-ASYITGQVICVDGG  254 (367)
Q Consensus       228 dvA~ai~~L~s~~-~~~itG~~i~vdgG  254 (367)
                      |+|++++.++... ....+|+.+++.|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            9999998877432 22335788888764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=4.1e-20  Score=184.44  Aligned_cols=224  Identities=19%  Similarity=0.116  Sum_probs=155.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHC---CCEEEEEeCChhHHHHHHHHHH---------------hcCCcEEEEEccCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGF---GAIIHTCSRNQTELNERLQEWK---------------LKGLKVTGSVCDLS   69 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~---G~~Vi~~~R~~~~~~~~~~~l~---------------~~~~~~~~~~~Dls   69 (367)
                      .++ +||||||+|+||++++++|+++   |++|++++|+.+......+...               ....++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            344 9999999999999999999999   9999999998765432221110               11358999999999


Q ss_pred             ------CHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEE
Q 035642           70 ------SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIV  143 (367)
Q Consensus        70 ------d~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV  143 (367)
                            +.++++++++        ++|+||||||....        +.++..+++|+.|+.++++++.    +.+.++||
T Consensus       151 ~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~----~~~~~~~V  210 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIAL----TTKLKPFT  210 (478)
T ss_dssp             SGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHT----SSSCCCEE
T ss_pred             CcccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHH----hCCCCeEE
Confidence                  5566666653        48999999998643        2234678999999999999874    34457899


Q ss_pred             EecCcccccCCCC----------------------CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccc-
Q 035642          144 FISSVAGVTAAPL----------------------TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDA-  200 (367)
Q Consensus       144 ~iSS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~-  200 (367)
                      ++||.+.+.....                      ...|+.||.+.+.+++.++.+.   |++++.++||+|.++.... 
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~~g  287 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSYAG  287 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSSSS
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCccCC
Confidence            9999765432111                      1349999999999999998865   7999999999998863311 


Q ss_pred             -ccCChhhhHHHHHHhh--cCCC---------------CCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCCc
Q 035642          201 -IRHDPAKNKIVEGLVS--RTPI---------------CRPGEPDEVSSLVAFLCFPA--ASYITGQVICVDGGM  255 (367)
Q Consensus       201 -~~~~~~~~~~~~~~~~--~~p~---------------~~~~~~~dvA~ai~~L~s~~--~~~itG~~i~vdgG~  255 (367)
                       ..........+.....  ..|.               ..+..++|+|++++.++...  .....|+++++.++.
T Consensus       288 ~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          288 QLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH  362 (478)
T ss_dssp             CCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred             cCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence             1111111112221111  1121               13467999999999987321  133468899997765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.84  E-value=3.1e-20  Score=170.79  Aligned_cols=192  Identities=17%  Similarity=0.119  Sum_probs=140.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++||||+|+||++++++|+ +|++|++++|+.+..         .+     +.+|++|++++.++++..      ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCCE
Confidence            59999999999999999999 599999999987421         12     778999999999988753      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC----------CCccHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP----------LTPLYG  161 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~----------~~~~Y~  161 (367)
                      ||||||.....    .+.+++++.+++|+.++.++++++.+    .+ ++||++||..++.+.+          ....|+
T Consensus        61 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           61 IINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             EEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99999975421    13467889999999999999999864    33 5999999988765433          256899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC------CCCCCCHHHHHHHHHH
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP------ICRPGEPDEVSSLVAF  235 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~ai~~  235 (367)
                      .+|++++.+++.    .     ....+.|+.+.++      . ..............+      ...+.+++|+|+++++
T Consensus       132 ~sK~~~e~~~~~----~-----~~~~iR~~~v~G~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  195 (273)
T 2ggs_A          132 LSKLLGETFALQ----D-----DSLIIRTSGIFRN------K-GFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILE  195 (273)
T ss_dssp             HHHHHHHHHHCC----T-----TCEEEEECCCBSS------S-SHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC----C-----CeEEEeccccccc------c-HHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHH
Confidence            999999999887    2     2345666666531      0 001111122222222      3467899999999999


Q ss_pred             HhCCCCCCccccEEEeCC
Q 035642          236 LCFPAASYITGQVICVDG  253 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdg  253 (367)
                      +++..   .+| .++++|
T Consensus       196 ~~~~~---~~g-~~~i~~  209 (273)
T 2ggs_A          196 LLELR---KTG-IIHVAG  209 (273)
T ss_dssp             HHHHT---CCE-EEECCC
T ss_pred             HHhcC---cCC-eEEECC
Confidence            98532   245 788877

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=2.2e-20  Score=173.24  Aligned_cols=196  Identities=12%  Similarity=0.035  Sum_probs=145.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++|||||||+||++++++|+++  |++|++++|+.++.+.+..      ..+.++.+|++|++++.+++        .++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~--------~~~   67 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QGVEVRHGDYNQPESLQKAF--------AGV   67 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cCCeEEEeccCCHHHHHHHH--------hcC
Confidence            5999999999999999999999  9999999999876543321      24678899999999888876        458


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+|||+||...       ..       ++|+.++.++++++.    +.+.++||++||.....   ....|+.+|.+.+.
T Consensus        68 d~vi~~a~~~~-------~~-------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~  126 (287)
T 2jl1_A           68 SKLLFISGPHY-------DN-------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SIIPLAHVHLATEY  126 (287)
T ss_dssp             SEEEECCCCCS-------CH-------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CCSTHHHHHHHHHH
T ss_pred             CEEEEcCCCCc-------Cc-------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CCCchHHHHHHHHH
Confidence            99999999521       11       578999999888874    34568999999987642   23479999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHH-H---hhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEG-L---VSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~-~---~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.       .|++++.+.||++.++.....     ....... .   ........+.+++|+|++++.++...  ..+
T Consensus       127 ~~~~-------~~~~~~ilrp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  192 (287)
T 2jl1_A          127 AIRT-------TNIPYTFLRNALYTDFFVNEG-----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE--GHE  192 (287)
T ss_dssp             HHHH-------TTCCEEEEEECCBHHHHSSGG-----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS--SCT
T ss_pred             HHHH-------cCCCeEEEECCEeccccchhh-----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC--CCC
Confidence            8863       489999999999876542111     0011111 0   00112235789999999999999542  347


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.++++||..
T Consensus       193 g~~~~i~~~~~  203 (287)
T 2jl1_A          193 NKTYNLVSNQP  203 (287)
T ss_dssp             TEEEEECCSSC
T ss_pred             CcEEEecCCCc
Confidence            99999998854

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=1.9e-21  Score=172.60  Aligned_cols=196  Identities=11%  Similarity=0.125  Sum_probs=144.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .++++||||+|+||++++++|+++|+  +|++++|+.++          ...++.++.+|++|++++.+++         
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh---------
Confidence            34899999999999999999999998  99999998764          1346788889998877655432         


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                       +|+||||||....      +.+.++..+++|+.++.++++++.+    .+.++||++||......  ....|+.+|.++
T Consensus        66 -~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~  132 (215)
T 2a35_A           66 -IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGEL  132 (215)
T ss_dssp             -CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred             -hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHH
Confidence             7999999996432      2345678889999999999998754    45679999999877543  356899999999


Q ss_pred             HHHHHHHHHHhCCCCeE-EEEEecCcccCCccccccCChhhhHHHHHHhhcCCC----CCCCCHHHHHHHHHHHhCCCCC
Q 035642          168 NQLTKHLECEQAKDNIR-ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI----CRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIr-vn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +.+++.       .|++ ++.++||++.++........ .   ..   ....|.    ..+.+++|+|++++.++.... 
T Consensus       133 e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~-~---~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  197 (215)
T 2a35_A          133 EQALQE-------QGWPQLTIARPSLLFGPREEFRLAE-I---LA---APIARILPGKYHGIEACDLARALWRLALEEG-  197 (215)
T ss_dssp             HHHHTT-------SCCSEEEEEECCSEESTTSCEEGGG-G---TT---CCCC----CHHHHHHHHHHHHHHHHHHTCCC-
T ss_pred             HHHHHH-------cCCCeEEEEeCceeeCCCCcchHHH-H---HH---HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-
Confidence            998875       3798 99999999998854311000 0   00   000111    124578999999999995432 


Q ss_pred             CccccEEEeCCCc
Q 035642          243 YITGQVICVDGGM  255 (367)
Q Consensus       243 ~itG~~i~vdgG~  255 (367)
                         |+.+++.++.
T Consensus       198 ---~~~~~i~~~~  207 (215)
T 2a35_A          198 ---KGVRFVESDE  207 (215)
T ss_dssp             ---SEEEEEEHHH
T ss_pred             ---CCceEEcHHH
Confidence               6677776553

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.83  E-value=1.3e-20  Score=174.79  Aligned_cols=193  Identities=15%  Similarity=0.155  Sum_probs=145.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+++|++|++++|.                     .+|++|.+++.++++..      ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence            79999999999999999999999999999992                     26999999999988753      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      |||+||......    ..++++..+++|+.++.++++++.+.    + .++|++||...+.+.           .+...|
T Consensus        60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999764221    12456788999999999999998653    2 489999998765332           235689


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-------CCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-------CRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~dvA~ai  233 (367)
                      +.+|.+.+.+++.++.       +++.+.|+.+.+|....     .............+.       ..+..++|+|+++
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  198 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNN-----FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMI  198 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCC-----HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCc-----HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence            9999999999988753       45889999998875321     111233333322222       2345699999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCcc
Q 035642          234 AFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ++++....    ++.+++.+|..
T Consensus       199 ~~~~~~~~----~~~~~i~~~~~  217 (287)
T 3sc6_A          199 NKLIHTSL----YGTYHVSNTGS  217 (287)
T ss_dssp             HHHHTSCC----CEEEECCCBSC
T ss_pred             HHHHhCCC----CCeEEEcCCCc
Confidence            99995432    66888888753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=1e-19  Score=171.36  Aligned_cols=209  Identities=14%  Similarity=0.096  Sum_probs=151.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+++|++|++++|+.                    .+|++|.+++.++++..      ++|+
T Consensus         5 ~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~~d~   58 (321)
T 1e6u_A            5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------RIDQ   58 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------CCCE
Confidence            899999999999999999999999999988863                    26999999998887643      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-------------CC--
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-------------PL--  156 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-------------~~--  156 (367)
                      |||+||.....   ....++.+..+++|+.++.++++++.+    .+.+++|++||...+...             +.  
T Consensus        59 vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p  131 (321)
T 1e6u_A           59 VYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  131 (321)
T ss_dssp             EEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             EEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCCC
Confidence            99999975321   112345678899999999999998854    345799999998765321             11  


Q ss_pred             -CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhh-------cC-------CC
Q 035642          157 -TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVS-------RT-------PI  220 (367)
Q Consensus       157 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~-------~~-------p~  220 (367)
                       ...|+.+|.+.+.+++.++.+.   |++++.++||++.++........ .....++..+..       ..       ..
T Consensus       132 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~  208 (321)
T 1e6u_A          132 TNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  208 (321)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEE
Confidence             2489999999999999998775   79999999999998865321111 111122332221       11       11


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCC------CccccEEEeCCCcc
Q 035642          221 CRPGEPDEVSSLVAFLCFPAAS------YITGQVICVDGGMT  256 (367)
Q Consensus       221 ~~~~~~~dvA~ai~~L~s~~~~------~itG~~i~vdgG~~  256 (367)
                      ..+..++|+|++++.++.....      ...|+.+++.+|..
T Consensus       209 ~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          209 REFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             ECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             EEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            1355899999999998843211      11368888877643

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.83  E-value=1.2e-20  Score=176.04  Aligned_cols=200  Identities=15%  Similarity=0.090  Sum_probs=146.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++|||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|++++.++++..      ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCCE
Confidence            69999999999999999999 8999999999862                 3467999999998888642      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----------CCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----------LTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----------~~~~Y  160 (367)
                      |||+||......    ..++++..+++|+.++.++++++.+    .+ .++|++||.+.+.+..           ....|
T Consensus        58 vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           58 IVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEECcccCCHhh----hhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            999999753211    1234567889999999999998843    33 4899999986653322           24689


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-------CCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-------CRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~dvA~ai  233 (367)
                      +.+|.+.+.+++.++.       +++.+.||++.++....     ........+....+.       ..+..++|+|+++
T Consensus       129 ~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  196 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNN-----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCT  196 (299)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCC-----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCc-----HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence            9999999999988642       78899999999885431     111233333333222       2345699999999


Q ss_pred             HHHhCCCCCCc-cccEEEeCCCcc
Q 035642          234 AFLCFPAASYI-TGQVICVDGGMT  256 (367)
Q Consensus       234 ~~L~s~~~~~i-tG~~i~vdgG~~  256 (367)
                      ++++....... .|+.+++.+|..
T Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          197 AHAIRVALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHHHHHHHCGGGCEEEECCCBSC
T ss_pred             HHHHHHhccccccCceEEEeCCCC
Confidence            99984321123 588999988753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=3.2e-19  Score=185.89  Aligned_cols=236  Identities=14%  Similarity=0.029  Sum_probs=158.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .+.+++ +||||||+|+||++++++|+++|++|++++|+........+.+.. .+.++.++.+|++|++++++++++   
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~---   82 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---   82 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh---
Confidence            344555 999999999999999999999999999999875432222222221 134677889999999999888764   


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------  153 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------  153 (367)
                         -++|+|||+||......    ..+..+..+++|+.++.++++++..    .+.++||++||.+.+..          
T Consensus        83 ---~~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           83 ---YKIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             ---SCCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             ---CCCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCCc
Confidence               26999999999754221    1233456789999999999887643    34689999999765421          


Q ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC------ChhhhHHHHHHhh--cCCC
Q 035642          154 -----APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH------DPAKNKIVEGLVS--RTPI  220 (367)
Q Consensus       154 -----~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~------~~~~~~~~~~~~~--~~p~  220 (367)
                           ......|+.||++++.+++.++.+. ..|++++.+.|+.+.++.......      ....-..+.....  ..+.
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKL  230 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCce
Confidence                 1134689999999999999998875 358999999999888764221110      0111111211111  1111


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhCCC----CCCccccEEEeCCCcc
Q 035642          221 ---------------CRPGEPDEVSSLVAFLCFPA----ASYITGQVICVDGGMT  256 (367)
Q Consensus       221 ---------------~~~~~~~dvA~ai~~L~s~~----~~~itG~~i~vdgG~~  256 (367)
                                     .-+..++|+|++++.++...    .....|+++++.+|..
T Consensus       231 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~  285 (699)
T 1z45_A          231 YIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG  285 (699)
T ss_dssp             CCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC
T ss_pred             EEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC
Confidence                           12456899999998877311    1122467888877753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.82  E-value=1.3e-19  Score=182.04  Aligned_cols=219  Identities=12%  Similarity=0.118  Sum_probs=156.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHH---HHHHHHHH---------hcCCcEEEEEccCCCHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL---NERLQEWK---------LKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~---~~~~~~l~---------~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      ++||||||||+||++++++|.+.|++|++++|+..+.   +.+.+.+.         ....++.++.+|+++++++.   
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---  227 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---  227 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC---
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC---
Confidence            3899999999999999999999999999999987632   22322222         12468999999999987776   


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc--ccC---
Q 035642           79 ETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG--VTA---  153 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~--~~~---  153 (367)
                           .. .++|+|||+|+...       ....++..+++|+.++.++++++.+     +.+++|++||...  ...   
T Consensus       228 -----~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~~  289 (508)
T 4f6l_B          228 -----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDT  289 (508)
T ss_dssp             -----CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTTC
T ss_pred             -----Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccCC
Confidence                 22 68999999999753       2235677889999999999998854     4589999999876  100   


Q ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC----hhhhHHHHHHhh
Q 035642          154 -------------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD----PAKNKIVEGLVS  216 (367)
Q Consensus       154 -------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~----~~~~~~~~~~~~  216 (367)
                                   ......|+.||.+.|.+++.++.    .|++++.+.||.+.++........    ......+.....
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~  365 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ  365 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH
Confidence                         11456899999999999998764    489999999999988865433111    111123333322


Q ss_pred             cC--CCC------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          217 RT--PIC------RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       217 ~~--p~~------~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      ..  |.+      .+.+++|+|+++++++....   .|+++++.+|...
T Consensus       366 ~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          366 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             CSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             cCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            21  211      25679999999999985433   7889999887643

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.82  E-value=4.5e-20  Score=170.88  Aligned_cols=193  Identities=15%  Similarity=0.109  Sum_probs=138.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||+|+||++++++|+++  |++|++++|+.++.+.+..      ..+.++.+|++|++++.+++        .++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~--------~~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSAL--------QGV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHH--------hCC
Confidence            4899999999999999999998  9999999999876543321      24678899999999888776        458


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+|||+||...                ..|+.++.++++++..    .+.++||++||..+.   +....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999999521                1366677777776643    356899999998765   233579999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHH-HHh---hcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE-GLV---SRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~-~~~---~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++.       .|++++.++||++.++.....      ..... ...   .......+.+++|+|+++++++...  ..+
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  188 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLASA------PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA--GHE  188 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTTH------HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS--SCT
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHHh------HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC--CCC
Confidence            8864       389999999998876542110      00111 000   0112335779999999999998543  247


Q ss_pred             ccEEEeCCCcc
Q 035642          246 GQVICVDGGMT  256 (367)
Q Consensus       246 G~~i~vdgG~~  256 (367)
                      |+.++++||..
T Consensus       189 g~~~~i~~~~~  199 (286)
T 2zcu_A          189 GKVYELAGDSA  199 (286)
T ss_dssp             TCEEEECCSSC
T ss_pred             CceEEEeCCCc
Confidence            99999998843

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.81  E-value=5.1e-19  Score=165.39  Aligned_cols=211  Identities=13%  Similarity=0.051  Sum_probs=147.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|+      +...           ....+.++.+|++|++++.++++.      .++|+
T Consensus         8 ~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~------~~~d~   64 (319)
T 4b8w_A            8 RILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEK------VQPTH   64 (319)
T ss_dssp             EEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHH------SCCSE
T ss_pred             eEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhh------cCCCE
Confidence            899999999999999999999998      1100           011223346799999999988864      36999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------------C
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------------P  155 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------------~  155 (367)
                      |||+|+.......   +.++....+++|+.|+.++++++..    .+.+++|++||.+.+...                +
T Consensus        65 Vih~A~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p  137 (319)
T 4b8w_A           65 VIHLAAMVGGLFR---NIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHN  137 (319)
T ss_dssp             EEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCS
T ss_pred             EEECceecccccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccccccCCCCC
Confidence            9999997532111   2234567889999999999998754    456799999998654221                1


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHH----HhhcCCC---------C
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEG----LVSRTPI---------C  221 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~----~~~~~p~---------~  221 (367)
                      ....|+.||.+.+.+++.++.+.   |++++.+.|+.+.+|........ .....++..    .....+.         .
T Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (319)
T 4b8w_A          138 SNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRR  214 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeE
Confidence            12259999999999999998875   79999999999998865321111 111122333    2333221         1


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .+..++|+|++++.++... ....|+.+++.+|..
T Consensus       215 ~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          215 QFIYSLDLAQLFIWVLREY-NEVEPIILSVGEEDE  248 (319)
T ss_dssp             CEEEHHHHHHHHHHHHHHC-CCSSCEEECCCGGGC
T ss_pred             EEEeHHHHHHHHHHHHhcc-ccCCceEEEecCCCc
Confidence            3468999999999988432 234677888876644

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.81  E-value=2.6e-20  Score=173.02  Aligned_cols=196  Identities=12%  Similarity=0.107  Sum_probs=144.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||| +|+||++++++|+++|++|++++|+.++.          ..++.++.+|++|.+++.++++       +++|+
T Consensus         5 ~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~~d~   66 (286)
T 3gpi_A            5 KILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LRPEI   66 (286)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GCCSE
T ss_pred             cEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CCCCE
Confidence            799999 59999999999999999999999987652          3467788999999998887764       46999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      |||+||..         ..+.+..+++|+.++.++++++.    +.+.+++|++||.+.+...           .....|
T Consensus        67 vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (286)
T 3gpi_A           67 LVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFS  133 (286)
T ss_dssp             EEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHH
T ss_pred             EEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChh
Confidence            99999852         23456778899999999988874    3556899999998654322           135689


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh------cCCCCCCCCHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS------RTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~~~~dvA~ai~  234 (367)
                      +.+|.+.+.+ +..        ++++.+.||.+.++....         +...+..      ......+..++|+|++++
T Consensus       134 ~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  195 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR---------MIRQAQTPEQWPARNAWTNRIHRDDGAAFIA  195 (286)
T ss_dssp             HHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH---------HHHHTTCGGGSCSSBCEECEEEHHHHHHHHH
T ss_pred             hHHHHHHHHH-Hhc--------CCeEEEecccccCCCchh---------HHHHHHhcccCCCcCceeEEEEHHHHHHHHH
Confidence            9999999988 543        788999999998875431         1111111      111224567999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcc
Q 035642          235 FLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +++........|+.+++.+|..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          196 YLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHHHHTTSCCCSEEEECCSCC
T ss_pred             HHHhhhccCCCCceEEEeCCCC
Confidence            9985422245688999988753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.80  E-value=4e-20  Score=173.80  Aligned_cols=209  Identities=14%  Similarity=0.069  Sum_probs=142.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL--KGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~--~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++||||||||+||++++++|+++|++|++++|+........+.+..  ....+.++.+|++                  +
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------------~   69 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------------D   69 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------------T
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------------c
Confidence            4899999999999999999999999999999986510000000000  0112233333433                  5


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCC
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLT  157 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~  157 (367)
                      +|+|||+||........+    .....++ |+.++.++++++...    +.++||++||...+...           ...
T Consensus        70 ~d~vi~~a~~~~~~~~~~----~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~  140 (321)
T 3vps_A           70 VRLVYHLASHKSVPRSFK----QPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSPLSPR  140 (321)
T ss_dssp             EEEEEECCCCCCHHHHTT----STTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             CCEEEECCccCChHHHHh----CHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCCCCCC
Confidence            899999999764321111    1223556 999999999988653    35799999998765332           225


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCCCCCHH
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNI-RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICRPGEPD  227 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gI-rvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~  227 (367)
                      ..|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+.+|....   ..........+....+         ...+.+++
T Consensus       141 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          141 SPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERP---DALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCT---TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCC---CChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence            68999999999999999876   478 99999999999886432   1111223333333222         12356899


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      |+|+++++++....   .| .+++.+|..
T Consensus       215 Dva~~~~~~~~~~~---~g-~~~i~~~~~  239 (321)
T 3vps_A          215 DVVDKLVALANRPL---PS-VVNFGSGQS  239 (321)
T ss_dssp             HHHHHHHHGGGSCC---CS-EEEESCSCC
T ss_pred             HHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence            99999999995433   37 999988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=7.9e-19  Score=163.99  Aligned_cols=207  Identities=14%  Similarity=0.052  Sum_probs=140.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++++||||||+||++++++|+++| ++|++++|+.++...  +.+..  ..+.++.+|++|++++.+++        .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~--------~~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELAL--------NG   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHH--------hc
Confidence            3589999999999999999999999 999999999765421  22222  24678899999999988877        45


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC--CCCCccHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA--APLTPLYGPYNGA  166 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~--~~~~~~Y~asKaa  166 (367)
                      +|+|||+||.....            ..+.|+.++.++++++    ++.+.++||++||......  ......|+.+|.+
T Consensus        73 ~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           73 AYATFIVTNYWESC------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             CSEEEECCCHHHHT------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             CCEEEEeCCCCccc------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            89999999843110            1234555666665554    4456789999666443221  1124679999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC----CCCCHHHHHHHHHHHhCCCCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC----RPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ++.+.+.       .|++++.++||++.+++...+....... . ....-..|.+    .+.+++|+|++++.++.... 
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  206 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPD-G-KSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-  206 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTT-S-SSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCC-C-CEEEEEecCCCCccceecHHHHHHHHHHHHcChh-
Confidence            9998865       2799999999999887643221100000 0 0000011222    35689999999999885322 


Q ss_pred             CccccEEEeCCC
Q 035642          243 YITGQVICVDGG  254 (367)
Q Consensus       243 ~itG~~i~vdgG  254 (367)
                      ...|+.+.+.|.
T Consensus       207 ~~~g~~~~~~g~  218 (299)
T 2wm3_A          207 KYVGQNIGLSTC  218 (299)
T ss_dssp             HHTTCEEECCSE
T ss_pred             hhCCeEEEeeec
Confidence            236888888764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.76  E-value=8.3e-18  Score=156.15  Aligned_cols=196  Identities=16%  Similarity=0.099  Sum_probs=134.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||||+||++++++|+++ |++|++++|+.++...+      ....+.++.+|++|++++.+++        .++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~--------~~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAF--------KGMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHH--------hCCC
Confidence            5999999999999999999998 99999999998764332      1346888999999999988877        4689


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      +|||+||.....              ..|+.++.++++++    ++.+.++||++||.......    .|..++...  +
T Consensus        68 ~vi~~a~~~~~~--------------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~~--~  123 (289)
T 3e48_A           68 TVVFIPSIIHPS--------------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHNN----PFHMSPYFG--Y  123 (289)
T ss_dssp             EEEECCCCCCSH--------------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTTC----CSTTHHHHH--H
T ss_pred             EEEEeCCCCccc--------------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCCC----CCccchhHH--H
Confidence            999999964321              23566666665555    45667899999996543322    222222211  1


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCC----CCCHHHHHHHHHHHhCCCCCCccc
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR----PGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +   ...+...|++++.++||++.+++....      ......-....+.+.    +.+++|+|+++++++.....  .|
T Consensus       124 ~---e~~~~~~g~~~~ilrp~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~g  192 (289)
T 3e48_A          124 A---SRLLSTSGIDYTYVRMAMYMDPLKPYL------PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--WG  192 (289)
T ss_dssp             H---HHHHHHHCCEEEEEEECEESTTHHHHH------HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--TT
T ss_pred             H---HHHHHHcCCCEEEEeccccccccHHHH------HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--CC
Confidence            1   122223489999999999998754211      111111111233333    67899999999999965433  38


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.+.++ |...
T Consensus       193 ~~~~~~-~~~~  202 (289)
T 3e48_A          193 KRYLLS-GYSY  202 (289)
T ss_dssp             CEEEEC-CEEE
T ss_pred             ceEEeC-CCcC
Confidence            999999 6554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.75  E-value=8.7e-18  Score=155.66  Aligned_cols=195  Identities=12%  Similarity=0.040  Sum_probs=135.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||| |+||++++++|+++|++|++++|+.++...+..      ..+.++.+|++|.+            + .++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence            47999998 999999999999999999999999877654432      35889999999832            3 6799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc--CCCCEEEEecCcccccCC-----------CCC
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA--SGNGIIVFISSVAGVTAA-----------PLT  157 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~--~~~g~IV~iSS~~~~~~~-----------~~~  157 (367)
                      +|||+|+.....     ..            .+.+++++    +++  .+.+++|++||...+...           ...
T Consensus        66 ~vi~~a~~~~~~-----~~------------~~~~l~~a----~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           66 HLLISTAPDSGG-----DP------------VLAALGDQ----IAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEEECCCCBTTB-----CH------------HHHHHHHH----HHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEEECCCccccc-----cH------------HHHHHHHH----HHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            999999975432     11            01223333    333  456899999997654322           123


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ..|+.+|.+.+.+++.+      .|++++.+.||.+.++...........  ....+........+..++|+|++++.++
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~a~~~~~  196 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKG--GIRRIIKPGQVFSRIHVEDIAQVLAASM  196 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSS--CCCEEECTTCCBCEEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcC--CccccCCCCcccceEEHHHHHHHHHHHH
Confidence            47999999999998887      489999999999988754322111000  0000000012234567899999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 035642          238 FPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       238 s~~~~~itG~~i~vdgG~~~  257 (367)
                      ....   .|+.+++.+|...
T Consensus       197 ~~~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          197 ARPD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             HSCC---TTCEEEECCSCCB
T ss_pred             hCCC---CCCEEEEeCCCCc
Confidence            5332   6889999887643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.75  E-value=4.8e-18  Score=162.93  Aligned_cols=207  Identities=12%  Similarity=0.041  Sum_probs=139.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEcc-CCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCD-LSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~D-lsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++++||||||+||++++++|+++|++|++++|+.++..  .+.+.. ...+.++.+| ++|++++.+++        ..+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~--------~~~   74 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLF--------EGA   74 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHH--------TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHH--------hcC
Confidence            48999999999999999999999999999999876542  122322 2368888999 99999988877        458


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcc-cccCCCCCccHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVA-GVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~-~~~~~~~~~~Y~asKaal  167 (367)
                      |++|||++....               +.|..+ .++++++    ++.+ .++||++||.. +..+......|+.||+++
T Consensus        75 d~Vi~~a~~~~~---------------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~  134 (352)
T 1xgk_A           75 HLAFINTTSQAG---------------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  134 (352)
T ss_dssp             SEEEECCCSTTS---------------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             CEEEEcCCCCCc---------------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHHHH
Confidence            999999975310               235544 5555554    3444 68999999986 344445557899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHH-HHhhcCC---CC--CCCCH-HHHHHHHHHHhCCC
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE-GLVSRTP---IC--RPGEP-DEVSSLVAFLCFPA  240 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~p---~~--~~~~~-~dvA~ai~~L~s~~  240 (367)
                      +.+++..       |++++.++||++.+................. ......+   ..  .+.++ +|+|++++.++...
T Consensus       135 E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          135 ENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             HHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence            9998762       7999999999764433211000000000000 0000001   11  24678 89999999998533


Q ss_pred             CCCccccEEEeCCCc
Q 035642          241 ASYITGQVICVDGGM  255 (367)
Q Consensus       241 ~~~itG~~i~vdgG~  255 (367)
                      .....|+++++.++.
T Consensus       208 ~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          208 PQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHHTTCEEEECSEE
T ss_pred             chhhCCeEEEEecCC
Confidence            223468899998654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.73  E-value=1.1e-17  Score=161.05  Aligned_cols=192  Identities=16%  Similarity=0.121  Sum_probs=142.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||||+||++++++|+++|+ +|+..+|+                         +|+++++++++        ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cCC
Confidence            699999999999999999999998 77776664                         67788888774        389


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC-EEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g-~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      +|||+||.....        ..+..+++|+.++.++++++.    +.+.. ++|++||.....    ...|+.+|.+.+.
T Consensus        49 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~  112 (369)
T 3st7_A           49 FIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQ  112 (369)
T ss_dssp             EEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHH
T ss_pred             EEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHH
Confidence            999999976532        234567889999999998873    33444 899999987654    6789999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC--------CCCCHHHHHHHHHHHhCCCC
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC--------RPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~--------~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +++.++.+.   |++++.+.|+.+.++....... .....+...+....+..        .+..++|+|++++.++....
T Consensus       113 ~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          113 LLREYAEEY---GNTVYIYRWPNLFGKWCKPNYN-SVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSS-CHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHh---CCCEEEEECCceeCCCCCCCcc-hHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            999998875   7899999999999885433211 11222333343333322        24569999999999985332


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      . ..|+.+++.+|...
T Consensus       189 ~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          189 T-IENGVPTVPNVFKV  203 (369)
T ss_dssp             C-EETTEECCSCCEEE
T ss_pred             c-cCCceEEeCCCCce
Confidence            2 13888888887443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.73  E-value=2.5e-17  Score=157.13  Aligned_cols=204  Identities=9%  Similarity=-0.008  Sum_probs=137.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh----hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ----TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~----~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      |.+ +|+||||||+||++++++|+++|++|++++|+.    ++.+. .+.+.  ...+.++.+|++|.+++.+++++   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~---   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE--DKGAIIVYGLINEQEAMEKILKE---   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH--HTTCEEEECCTTCHHHHHHHHHH---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH--hCCcEEEEeecCCHHHHHHHHhh---
Confidence            344 899999999999999999999999999999986    33332 22333  24678899999999999988864   


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc----CCCCCcc
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT----AAPLTPL  159 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~----~~~~~~~  159 (367)
                         .++|+|||+||.                   .|+.++.++++++...   ....++|+ |+.....    +.+....
T Consensus        82 ---~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~---g~v~~~v~-S~~g~~~~e~~~~~p~~~  135 (346)
T 3i6i_A           82 ---HEIDIVVSTVGG-------------------ESILDQIALVKAMKAV---GTIKRFLP-SEFGHDVNRADPVEPGLN  135 (346)
T ss_dssp             ---TTCCEEEECCCG-------------------GGGGGHHHHHHHHHHH---CCCSEEEC-SCCSSCTTTCCCCTTHHH
T ss_pred             ---CCCCEEEECCch-------------------hhHHHHHHHHHHHHHc---CCceEEee-cccCCCCCccCcCCCcch
Confidence               369999999996                   2777888888887542   22577875 5443221    1234468


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh---hhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA---KNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      |+.+|.+++.+.+.       .|++++.++||++.+...........   ................+.+++|+|++++.+
T Consensus       136 y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          136 MYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHH
Confidence            99999999888765       47999999999988755332211000   000000000111123467899999999999


Q ss_pred             hCCCCCCccccEEEeCC
Q 035642          237 CFPAASYITGQVICVDG  253 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdg  253 (367)
                      +...  ...|+.+.+.|
T Consensus       209 l~~~--~~~~~~~~i~g  223 (346)
T 3i6i_A          209 VDDV--RTLNKSVHFRP  223 (346)
T ss_dssp             TTCG--GGTTEEEECCC
T ss_pred             HhCc--cccCeEEEEeC
Confidence            9543  33477777763

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.73  E-value=1.6e-16  Score=152.01  Aligned_cols=211  Identities=11%  Similarity=0.076  Sum_probs=144.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-----CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-----AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-----~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +||||||||+||++++++|+++|     ++|++++|+.....       ....++.++.+|++|++++.++++..     
T Consensus         3 ~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   70 (364)
T 2v6g_A            3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL-----   70 (364)
T ss_dssp             EEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC-----
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC-----
Confidence            79999999999999999999999     99999999875432       12346788899999999888777421     


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEE-------EecCcccccCC-----
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIV-------FISSVAGVTAA-----  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV-------~iSS~~~~~~~-----  154 (367)
                      +++|+|||+||...         ++.+..+++|+.++.++++++.+..  .+..++|       ++||.+.+...     
T Consensus        71 ~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           71 TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccCCC
Confidence            24999999999752         1356788999999999999986531  1456787       68887543211     


Q ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHhCCCC-eEEEEEecCcccCCccccccCChhhhH-HHHHH--hhcCCCC
Q 035642          155 ---------PLTPLYGPYNGAMNQLTKHLECEQAKDN-IRANSIAPGVIRTSLSDAIRHDPAKNK-IVEGL--VSRTPIC  221 (367)
Q Consensus       155 ---------~~~~~Y~asKaal~~l~~~la~e~~~~g-Irvn~I~PG~v~t~~~~~~~~~~~~~~-~~~~~--~~~~p~~  221 (367)
                               +....|.    +.+.+++.++.   ..| ++++.++|+.+.++...... ...... ....+  ....+..
T Consensus       140 ~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~g~~~~  211 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMM-NLVGTLCVYAAICKHEGKVLR  211 (364)
T ss_dssp             SBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSS-CHHHHHHHHHHHHHHHTCCBC
T ss_pred             CCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCccc-chHHHHHHHHHHHHhcCCcee
Confidence                     1133562    35555555542   245 99999999999988654221 111111 12222  1222211


Q ss_pred             ------------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 035642          222 ------------RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       222 ------------~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                                  .+.+++|+|++++.++.  .....|+.+++.+|.
T Consensus       212 ~~g~~~~~~~~~~~~~v~Dva~a~~~~~~--~~~~~g~~~ni~~~~  255 (364)
T 2v6g_A          212 FTGCKAAWDGYSDCSDADLIAEHHIWAAV--DPYAKNEAFNVSNGD  255 (364)
T ss_dssp             CCSCHHHHHSCBCCEEHHHHHHHHHHHHH--CGGGTTEEEEECCSC
T ss_pred             cCCCcccccccCCCCcHHHHHHHHHHHHh--CCCCCCceEEecCCC
Confidence                        23456999999999884  333478899998875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.72  E-value=2.8e-17  Score=154.08  Aligned_cols=202  Identities=11%  Similarity=0.066  Sum_probs=132.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-----hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-----TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-----~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++|+||||||+||++++++|+++|++|++++|+.     ++.+.+ +.+.  ...+.++.+|++|++++.+++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~-------   74 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDAL-------   74 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHH-------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHH-------
Confidence            3799999999999999999999999999999984     333222 2232  345778899999999988877       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC------CCCCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA------APLTP  158 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~------~~~~~  158 (367)
                       .++|+|||+||.....               .|+.++.++++++.    +.+ .++||+ |+......      .+...
T Consensus        75 -~~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~  133 (313)
T 1qyd_A           75 -KQVDVVISALAGGVLS---------------HHILEQLKLVEAIK----EAGNIKRFLP-SEFGMDPDIMEHALQPGSI  133 (313)
T ss_dssp             -TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHHH----HSCCCSEEEC-SCCSSCTTSCCCCCSSTTH
T ss_pred             -hCCCEEEECCccccch---------------hhHHHHHHHHHHHH----hcCCCceEEe-cCCcCCccccccCCCCCcc
Confidence             4599999999975331               25666666666653    455 678885 44332111      13345


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh----hhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP----AKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      .| .+|.+++.+.+.       .|++++.++||++.+++........    .................+.+++|+|++++
T Consensus       134 ~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            68 999999887752       3789999999988664332211100    00000000000011123568999999999


Q ss_pred             HHhCCCCCCccccEEEeCC
Q 035642          235 FLCFPAASYITGQVICVDG  253 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdg  253 (367)
                      .++...  ...|+.+.+.|
T Consensus       206 ~~l~~~--~~~~~~~~~~g  222 (313)
T 1qyd_A          206 KSIDDP--QTLNKTMYIRP  222 (313)
T ss_dssp             HHTTCG--GGSSSEEECCC
T ss_pred             HHHhCc--ccCCceEEEeC
Confidence            998543  23477777765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.72  E-value=3.2e-17  Score=153.24  Aligned_cols=197  Identities=13%  Similarity=0.089  Sum_probs=130.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-------hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-------TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-------~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|+||||||+||++++++|+++|++|++++|+.       ++.+.+ +.+..  ..+.++.+|++|++++.+++      
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~------   74 (307)
T 2gas_A            4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAI------   74 (307)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHH------
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHH------
Confidence            799999999999999999999999999999986       444433 33332  24778899999999888877      


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCccccc-----CCCCCc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVT-----AAPLTP  158 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~-----~~~~~~  158 (367)
                        .++|+|||+||...                   +.++.++++++    ++.+ .+++|. |+.....     ..+...
T Consensus        75 --~~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  128 (307)
T 2gas_A           75 --KQVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP-SEFGLDVDRHDAVEPVRQ  128 (307)
T ss_dssp             --TTCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             --hCCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee-cccccCcccccCCCcchh
Confidence              45999999999642                   23344555554    3344 678873 4332111     112235


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh---hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP---AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      .| .+|.+++.+.+.       .|++++.++||++.+++........   .................+.+++|+|++++.
T Consensus       129 ~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  200 (307)
T 2gas_A          129 VF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIR  200 (307)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHH
Confidence            78 999999987763       2789999999999887543321110   000000000011112345689999999999


Q ss_pred             HhCCCCCCccccEEEeCC
Q 035642          236 LCFPAASYITGQVICVDG  253 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdg  253 (367)
                      ++.+.  ...|+.+.+.|
T Consensus       201 ~l~~~--~~~~~~~~~~~  216 (307)
T 2gas_A          201 AANDP--NTLNKAVHIRL  216 (307)
T ss_dssp             HHTCG--GGTTEEEECCC
T ss_pred             HHcCc--cccCceEEEeC
Confidence            99643  23477777765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.71  E-value=6.3e-18  Score=159.22  Aligned_cols=206  Identities=13%  Similarity=0.120  Sum_probs=127.7

Q ss_pred             CCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            4 YVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         4 ~~~~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      |..+.|.++++||||||+||++++++|+++|++|++++|+.+...+..+.+..  ..+.++.+|++|++++.+++     
T Consensus         5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~-----   77 (318)
T 2r6j_A            5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELM-----   77 (318)
T ss_dssp             ----CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHH-----
T ss_pred             ccccCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHH-----
Confidence            33344556899999999999999999999999999999987522222233332  24778899999999988887     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC--C---CCC
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA--A---PLT  157 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~--~---~~~  157 (367)
                         .++|+|||+|+...                   +.++.++++++    ++.+ .++||+ |+......  .   +..
T Consensus        78 ---~~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~  130 (318)
T 2r6j_A           78 ---KKVDVVISALAFPQ-------------------ILDQFKILEAI----KVAGNIKRFLP-SDFGVEEDRINALPPFE  130 (318)
T ss_dssp             ---TTCSEEEECCCGGG-------------------STTHHHHHHHH----HHHCCCCEEEC-SCCSSCTTTCCCCHHHH
T ss_pred             ---cCCCEEEECCchhh-------------------hHHHHHHHHHH----HhcCCCCEEEe-eccccCcccccCCCCcc
Confidence               35899999998531                   22334444444    3444 678874 44321111  1   112


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          158 PLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      ..| .+|.+++.+.+.       .|++++.+.||++.+...........................+.+++|+|++++.++
T Consensus       131 ~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (318)
T 2r6j_A          131 ALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA  202 (318)
T ss_dssp             HHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred             hhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence            468 999999887753       378889999998765432111000000000000000111223568999999999998


Q ss_pred             CCCCCCccccEEEeCC
Q 035642          238 FPAASYITGQVICVDG  253 (367)
Q Consensus       238 s~~~~~itG~~i~vdg  253 (367)
                      ....  ..|+.+.+.|
T Consensus       203 ~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          203 TDPR--ALNRVVIYRP  216 (318)
T ss_dssp             TCGG--GTTEEEECCC
T ss_pred             cCcc--ccCeEEEecC
Confidence            6432  3467777765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.67  E-value=4.8e-17  Score=153.26  Aligned_cols=196  Identities=12%  Similarity=0.188  Sum_probs=126.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh------hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ------TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~------~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|+||||||+||++++++|+++|++|++++|+.      ++.+ ..+.+..  ..+.++.+|++|++++.+++       
T Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~l~~~~~--~~v~~v~~D~~d~~~l~~a~-------   75 (321)
T 3c1o_A            6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQ-LREEFRS--MGVTIIEGEMEEHEKMVSVL-------   75 (321)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHH-------
T ss_pred             EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHH-HHHHhhc--CCcEEEEecCCCHHHHHHHH-------
Confidence            799999999999999999999999999999986      2222 2223322  34778899999999988887       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC---C---CCCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA---A---PLTP  158 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~---~---~~~~  158 (367)
                       ..+|+|||+||...                   +.++.++++++    ++.+ .++|| .|+ .+...   .   +...
T Consensus        76 -~~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v-~S~-~g~~~~~~~~~~p~~~  129 (321)
T 3c1o_A           76 -KQVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFL-PSD-FGCEEDRIKPLPPFES  129 (321)
T ss_dssp             -TTCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEE-CSC-CSSCGGGCCCCHHHHH
T ss_pred             -cCCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEe-ccc-cccCccccccCCCcch
Confidence             45899999999532                   23344444444    3444 67887 333 33111   1   1134


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC---hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD---PAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      .| .+|.+++.+++.       .|++++.++||++.++........   ..................+.+++|+|++++.
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (321)
T 3c1o_A          130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK  201 (321)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence            68 999999988863       268888999998866532211000   0000000000011112246789999999999


Q ss_pred             HhCCCCCCccccEEEeCC
Q 035642          236 LCFPAASYITGQVICVDG  253 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdg  253 (367)
                      ++.+..  ..|+.+.+.|
T Consensus       202 ~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          202 VACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHCGG--GTTEEEECCC
T ss_pred             HHhCcc--ccCeEEEEeC
Confidence            985432  3578888875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.67  E-value=5.2e-16  Score=156.15  Aligned_cols=201  Identities=13%  Similarity=0.072  Sum_probs=137.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|++|++++|+..+.+              .+.+|+.+.  .       .+.+ .++|+
T Consensus       149 ~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~--~-------~~~l-~~~D~  204 (516)
T 3oh8_A          149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNP--A-------SDLL-DGADV  204 (516)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSC--C-------TTTT-TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccch--h-------HHhc-CCCCE
Confidence            8999999999999999999999999999999976421              155687643  1       1223 57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-C----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-A----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~----------~~~~~~Y  160 (367)
                      |||+||.....   ..+.+..+..+++|+.|+.++++++.   +..+.++||++||...+. .          ..+...|
T Consensus       205 Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          205 LVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             EEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             EEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            99999975433   22455677899999999999999753   245568999999976543 0          1134568


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc--CCC------CCCCCHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR--TPI------CRPGEPDEVSSL  232 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~p~------~~~~~~~dvA~a  232 (367)
                      +.+|...+.+.+...    ..|++++.+.||.+.++...      ....+...+...  ...      ..+..++|+|++
T Consensus       279 ~~~~~~~E~~~~~~~----~~gi~~~ilRp~~v~Gp~~~------~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~a  348 (516)
T 3oh8_A          279 AEVCRDWEHATAPAS----DAGKRVAFIRTGVALSGRGG------MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDI  348 (516)
T ss_dssp             HHHHHHHHHTTHHHH----HTTCEEEEEEECEEEBTTBS------HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH----hCCCCEEEEEeeEEECCCCC------hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHH
Confidence            888888777655432    35899999999999987521      111111111111  111      235679999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCc
Q 035642          233 VAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      ++.++..  ....| .+++.+|.
T Consensus       349 i~~~l~~--~~~~g-~~ni~~~~  368 (516)
T 3oh8_A          349 YYRAIVD--AQISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHC--TTCCE-EEEESCSC
T ss_pred             HHHHHhC--cccCC-cEEEECCC
Confidence            9999843  33455 56666553

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.64  E-value=2.8e-16  Score=146.91  Aligned_cols=198  Identities=10%  Similarity=0.102  Sum_probs=126.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT------ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~------~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++|+||||||+||++++++|+++|++|++++|+..      +.+ ..+.+.  ...+.++.+|++|++++.++++     
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQ-LLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHH-HHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHH-HHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            37999999999999999999999999999999843      222 122332  3457788999999999888774     


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecCcccccC-----CCCCc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISSVAGVTA-----APLTP  158 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS~~~~~~-----~~~~~  158 (367)
                         ++|+|||+||...                   +.+..++++++    ++.+ .++||+ |+......     .+...
T Consensus        77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  129 (308)
T 1qyc_A           77 ---NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAKS  129 (308)
T ss_dssp             ---TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             ---CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcchh
Confidence               4899999998531                   22334455544    3344 678874 54332211     12234


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh---hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP---AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      .| .+|.+++.+.+.       .|++++.+.||++.+++........   .................+.+++|+|++++.
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK  201 (308)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence            68 999999888764       2688899999988654332111100   000000000001111235689999999999


Q ss_pred             HhCCCCCCccccEEEeCC
Q 035642          236 LCFPAASYITGQVICVDG  253 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdg  253 (367)
                      ++...  ...|+.+.+.|
T Consensus       202 ~l~~~--~~~~~~~~~~g  217 (308)
T 1qyc_A          202 AVDDP--RTLNKTLYLRL  217 (308)
T ss_dssp             TSSCG--GGTTEEEECCC
T ss_pred             HHhCc--cccCeEEEEeC
Confidence            88543  23477777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.55  E-value=2.6e-13  Score=126.40  Aligned_cols=203  Identities=15%  Similarity=0.125  Sum_probs=129.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|+++|++|++++|++..            ..+   ..|     ..+      .+.+ ..+|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~~------~~~l-~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----ELA------ASGL-PSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HHH------HHCC-CSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hhh------Hhhc-cCCCE
Confidence            59999999999999999999999999999997642            111   112     111      1223 57999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      +||.||..........+.+..+..++.|+.++.++.+++...  ..+..++|+.||...+...           .....|
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            999998643333333467777888999999999888876543  2334567777776554321           122345


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhc--CC------CCCCCCHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSR--TP------ICRPGEPDEVSSL  232 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~p------~~~~~~~~dvA~a  232 (367)
                      +.+|...+..     ......++++..+.||.+.+|....      ...........  .+      ...+..++|+|++
T Consensus       133 ~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~------~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a  201 (298)
T 4b4o_A          133 SNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGA------MGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGI  201 (298)
T ss_dssp             HHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHH------HHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred             HHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCc------hhHHHHHHhcCCcceecccCceeecCcHHHHHHH
Confidence            5555444332     2334568999999999998874211      11111111111  11      1224579999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCccc
Q 035642          233 VAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       233 i~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +.+++  +.....| .+++.++...
T Consensus       202 ~~~~~--~~~~~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          202 LTHAL--EANHVHG-VLNGVAPSSA  223 (298)
T ss_dssp             HHHHH--HCTTCCE-EEEESCSCCC
T ss_pred             HHHHH--hCCCCCC-eEEEECCCcc
Confidence            99988  4444456 7777766543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.27  E-value=9e-13  Score=122.59  Aligned_cols=108  Identities=15%  Similarity=0.198  Sum_probs=81.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++||||+||||+++++.|+++|++|++++|+.++++++.+++... ..+.++.+|+++++++++++        
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~--------  186 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV--------  186 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT--------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH--------
Confidence            4555 9999999999999999999999999999999999888888777542 13556778999999887766        


Q ss_pred             CCccEEEEcCCCCCC-CCccCCCH-HHHHHhHHHhhHHHH
Q 035642           87 GKLNLLVNNAAVAVP-KEALDTTA-EYMSTLRSTNFESVF  124 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~-~~~~~~~~-e~~~~~~~vNv~g~~  124 (367)
                      ..+|+||||||.... .+..+.+. +.++.++++|+.+++
T Consensus       187 ~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          187 KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            458999999986432 22212222 344456777777665

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.27  E-value=5.5e-12  Score=119.47  Aligned_cols=162  Identities=10%  Similarity=0.037  Sum_probs=109.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQ--TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~--~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +|+||||+|+||.+++..|+++|+       .|++++++.  ++.+....++......  ++ .|+.+.++..+.+    
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~----   78 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF----   78 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh----
Confidence            799999999999999999999996       899999875  3333333344322111  22 3665544444443    


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc--------c-C
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV--------T-A  153 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~--------~-~  153 (367)
                          ...|+|||.||.....   ..+   ..+.++.|+.++.++++++..+-  ....+++++||....        . +
T Consensus        79 ----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           79 ----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             ----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             ----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCC
Confidence                4589999999976432   123   34678999999999999987641  134588888886521        1 2


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRT  195 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t  195 (367)
                      .+....|+.+|...+.+.+.++..+   |+++..++|.++.+
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG  185 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred             CChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence            3344579999999999999998776   44444445444433

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.84  E-value=5.7e-09  Score=92.94  Aligned_cols=81  Identities=26%  Similarity=0.257  Sum_probs=60.3

Q ss_pred             CCC-eEEEEcC----------------CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH
Q 035642            9 NEQ-NYFITGG----------------TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR   71 (367)
Q Consensus         9 ~~~-~vLVTGa----------------s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~   71 (367)
                      +.+ +||||||                |||||+++|++|+++|++|++++++.. ++       . ...+  -.+|+++.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------~-~~g~--~~~dv~~~   74 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------T-PPFV--KRVDVMTA   74 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------C-CTTE--EEEECCSH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------c-CCCC--eEEccCcH
Confidence            556 9999999                699999999999999999999987652 11       0 1112  24588775


Q ss_pred             HHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCc
Q 035642           72 EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEA  104 (367)
Q Consensus        72 ~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~  104 (367)
                      +   ++++.+.+.+ +++|++|||||+....+.
T Consensus        75 ~---~~~~~v~~~~-~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           75 L---EMEAAVNASV-QQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             H---HHHHHHHHHG-GGCSEEEECCBCCSEEES
T ss_pred             H---HHHHHHHHhc-CCCCEEEECCcccCCCCc
Confidence            4   4566667777 889999999998754433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.79  E-value=3.7e-08  Score=77.86  Aligned_cols=71  Identities=17%  Similarity=0.218  Sum_probs=60.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|+ |++|+++++.|++.| ++|++++|+.++.+.+.      ...+.++.+|+++.+++.+++        .++|
T Consensus         7 ~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~--------~~~d   71 (118)
T 3ic5_A            7 NICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKAL--------GGFD   71 (118)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHH--------cCCC
Confidence            8999999 999999999999999 89999999988776554      224567788999998877765        4689


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|++++
T Consensus        72 ~vi~~~~   78 (118)
T 3ic5_A           72 AVISAAP   78 (118)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999996

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.69  E-value=1e-08  Score=86.45  Aligned_cols=78  Identities=14%  Similarity=0.047  Sum_probs=64.9

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCChhHHH---HHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCccEEEE
Q 035642           20 RGIGHAIVEELAGFGAIIHTCSRNQTELN---ERLQEWKLKGLKVTGSVCDLSSR--EQREKLMETVSSIFQGKLNLLVN   94 (367)
Q Consensus        20 ~GIG~aia~~L~~~G~~Vi~~~R~~~~~~---~~~~~l~~~~~~~~~~~~Dlsd~--~sv~~~~~~~~~~~~g~iD~lI~   94 (367)
                      +-++.++++.|+++|++|+++.|+.+...   +..+.+...|.++..+++|++++  ++++++++.+.+.+ |+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence            35789999999999999999988765432   23445556688899999999999  99999999999888 78 99999


Q ss_pred             cCCCC
Q 035642           95 NAAVA   99 (367)
Q Consensus        95 ~Ag~~   99 (367)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99963

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.69  E-value=6.4e-09  Score=92.85  Aligned_cols=90  Identities=16%  Similarity=0.181  Sum_probs=63.6

Q ss_pred             CeEEEEcC----------------CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Q 035642           11 QNYFITGG----------------TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR   74 (367)
Q Consensus        11 ~~vLVTGa----------------s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv   74 (367)
                      ++||||||                ||++|.++|++|+++|++|++++|+... ..      .....+..  .|+.   ++
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~~--~~v~---s~   71 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLSI--REIT---NT   71 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEEE--EECC---SH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeEE--EEHh---HH
Confidence            38999999                8889999999999999999999997531 00      00112322  2444   56


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHH
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS  113 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~  113 (367)
                      .++++.+.+.+ +++|++|||||+....+....+.+.+.
T Consensus        72 ~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~~  109 (232)
T 2gk4_A           72 KDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred             HHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhhh
Confidence            66677777777 789999999999766554433444433

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.62  E-value=2e-07  Score=90.69  Aligned_cols=80  Identities=24%  Similarity=0.231  Sum_probs=69.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG---AIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G---~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +|+|+|| ||||+++++.|+++|   ..|++++|+.++++++.+++... +.++..+.+|++|.+++++++++.      
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~------   75 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV------   75 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh------
Confidence            6899999 899999999999998   48999999999999988888653 246788899999999999998754      


Q ss_pred             CccEEEEcCCC
Q 035642           88 KLNLLVNNAAV   98 (367)
Q Consensus        88 ~iD~lI~~Ag~   98 (367)
                      ++|+||||++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            58999999984

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.48  E-value=2.7e-07  Score=80.30  Aligned_cols=101  Identities=20%  Similarity=0.216  Sum_probs=70.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||.++++.+...|++|++++|++++.+.+.    +.+...   .+|.++.+..+.+.+...   ++++|
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~---~~~~D  109 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD---GYGVD  109 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT---TCCEE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC---CCCCe
Confidence            39999999999999999999999999999999987665432    224332   247777654444443321   13699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ++|+|+|.           +.               .+.+++.++.  +|++|++++..
T Consensus       110 ~vi~~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAG-----------EA---------------IQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCT-----------HH---------------HHHHHHTEEE--EEEEEECSCGG
T ss_pred             EEEECCch-----------HH---------------HHHHHHHhcc--CCEEEEEcCCC
Confidence            99999972           00               2344455533  58999998864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.45  E-value=3.5e-07  Score=90.04  Aligned_cols=76  Identities=11%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||| +||||+++++.|++.|++|++++|+.++++++.+.+    ..+..+.+|++|.+++.+++        .++|
T Consensus         4 k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l--------~~~D   70 (450)
T 1ff9_A            4 KSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AKHD   70 (450)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHH--------TTSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHH--------cCCc
Confidence            3899998 799999999999999999999999987766554332    24677889999998887776        4699


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.42  E-value=4.4e-07  Score=86.16  Aligned_cols=102  Identities=16%  Similarity=0.191  Sum_probs=72.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||+||+||||+++++.+...|++|++++|++++.+.+ +++   +...   .+|.++.+++.+.+.++..   +++|
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~~---~~~D  240 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGEV---FIDFTKEKDIVGAVLKATD---GGAH  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCCE---EEETTTCSCHHHHHHHHHT---SCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCce---EEecCccHhHHHHHHHHhC---CCCC
Confidence            3999999999999999999999999999999998876543 232   4332   2487765556666655442   4799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ++|+|+|.          .+               .++.+++.++.  +|+||.+++..
T Consensus       241 ~vi~~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVS----------EA---------------AIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSC----------HH---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred             EEEECCCc----------HH---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence            99999983          11               23444455433  58999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.41  E-value=4.8e-07  Score=86.83  Aligned_cols=105  Identities=18%  Similarity=0.218  Sum_probs=73.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +.+ +++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+   +..   +.+|.++.+++.+++.        
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~--------  228 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ--------  228 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh--------
Confidence            445 9999999 99999999999999999999999998876655433   333   3457788877776653        


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ..|++|++++.....                   .+..+.+..++.|+  +++.||++|+..
T Consensus       229 ~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          229 HADLLIGAVLVPGAK-------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             HCSEEEECCC--------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CCCEEEECCCCCccc-------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            479999999864211                   01223455566663  368999999754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.41  E-value=5.9e-07  Score=84.70  Aligned_cols=77  Identities=8%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||.++++.+...|++|++++|+.++++.+ +++   +...   .+|.++.+++.+.+.++..   +++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~~---~~~d  216 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKASP---DGYD  216 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHCT---TCEE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHhC---CCCe
Confidence            3999999999999999999999999999999998877655 433   3332   2487774445555544432   5799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.40  E-value=1.2e-06  Score=82.73  Aligned_cols=149  Identities=11%  Similarity=0.076  Sum_probs=99.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCC----hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRN----QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~----~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +|+||||+|+||.+++..|+..|.       .|++++++    +++++....++......+.   .|+....+..+.+  
T Consensus         7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al--   81 (329)
T 1b8p_A            7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF--   81 (329)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT--
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh--
Confidence            899999999999999999999885       79999998    6666655556654211111   2433323333333  


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc--------c
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV--------T  152 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~--------~  152 (367)
                            ...|+|||+||.....   ..+.   .+.+..|+..+..+.+.+..+-  ...++||++|.....        .
T Consensus        82 ------~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~  147 (329)
T 1b8p_A           82 ------KDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSA  147 (329)
T ss_dssp             ------TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             ------CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHc
Confidence                  4689999999975321   1233   3467889999998888887651  135789999875421        1


Q ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhC
Q 035642          153 -AAPLTPLYGPYNGAMNQLTKHLECEQA  179 (367)
Q Consensus       153 -~~~~~~~Y~asKaal~~l~~~la~e~~  179 (367)
                       +.|..-.|+.++.-...+.+.++..++
T Consensus       148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          148 PSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             233333466666666777777887765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.31  E-value=2e-07  Score=86.39  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=58.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|||++ |+|++++..|++.| +|++++|+.++++++.+++...+.....+.+|+++.          .+.+ 
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~-  191 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL-  191 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC-
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh-
Confidence            4555 99999997 99999999999999 999999999988888877754210000112344441          2334 


Q ss_pred             CCccEEEEcCCCCCC
Q 035642           87 GKLNLLVNNAAVAVP  101 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~  101 (367)
                      +++|++|||+|....
T Consensus       192 ~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          192 DGVDIIINATPIGMY  206 (287)
T ss_dssp             TTCCEEEECSCTTCT
T ss_pred             CCCCEEEECCCCCCC
Confidence            789999999997643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.30  E-value=1.7e-09  Score=106.25  Aligned_cols=45  Identities=11%  Similarity=0.011  Sum_probs=38.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      +++.+ +++|||++ +||+++|+.|++.|++|+++++++.++.+...
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            34666 99999987 99999999999999999999999877665543

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.29  E-value=1.7e-07  Score=94.10  Aligned_cols=96  Identities=13%  Similarity=0.109  Sum_probs=66.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF-Q   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~-~   86 (367)
                      +++ +++|||| ||+|++++..|++.|++|++++|+.++++++.+++.   .++.    ++.+   +        +.+ .
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l--------~~~~~  422 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---L--------DNYHP  422 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---T--------TTC--
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---h--------hhccc
Confidence            455 8999999 599999999999999999999999998888877662   2221    2222   1        111 0


Q ss_pred             CCccEEEEcCCCCCC-----CCccCCCHHHHHHhHHHhhHHH
Q 035642           87 GKLNLLVNNAAVAVP-----KEALDTTAEYMSTLRSTNFESV  123 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~-----~~~~~~~~e~~~~~~~vNv~g~  123 (367)
                      +.+|++|||+|+...     .++.+.+.+.|..++++|+.+.
T Consensus       423 ~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          423 EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             cCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            458999999997532     2455556667778888888764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.23  E-value=3.5e-06  Score=79.38  Aligned_cols=78  Identities=14%  Similarity=0.210  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||.++++.+...|++|++++|++++++.+.+ +   +...   .+|.++.+..+++.+.. ..  .++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~-~~--~~~d  216 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREIT-GG--KGVD  216 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHH-TT--CCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHh-CC--CCCe
Confidence            399999999999999999999999999999999877765533 3   4332   24777655444444332 11  3699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999994

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.23  E-value=7e-06  Score=76.79  Aligned_cols=83  Identities=19%  Similarity=0.189  Sum_probs=63.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN---QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~---~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +++++ +++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++....+ ..+...++.+.+++.+.+   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l---  224 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEI---  224 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhh---
Confidence            45566 9999998 7999999999999999 89999999   8888888888865422 223334677766655444   


Q ss_pred             HHHcCCCccEEEEcCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~   99 (367)
                           ...|+|||+....
T Consensus       225 -----~~aDiIINaTp~G  237 (315)
T 3tnl_A          225 -----AESVIFTNATGVG  237 (315)
T ss_dssp             -----HTCSEEEECSSTT
T ss_pred             -----cCCCEEEECccCC
Confidence                 3579999997654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.22  E-value=2.3e-06  Score=84.48  Aligned_cols=78  Identities=9%  Similarity=0.168  Sum_probs=61.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ +|+|+|| ||+|++++..|++. |++|++++|+.++++++.+.   .  .+..+.+|++|.+++.++++      
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l~------   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--GSKAISLDVTDDSALDKVLA------   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHHc------
Confidence            4455 8999998 99999999999998 78999999999887766543   1  34566789999988777663      


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                        ++|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              589999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.21  E-value=3.4e-06  Score=79.20  Aligned_cols=102  Identities=16%  Similarity=0.246  Sum_probs=71.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|||||+||||.++++.+...|++|++++|++++.+.+.+ +   +...   .+|.++.+..+++.+...   +.++|
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~---~~~~D  211 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG---GKKVR  211 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT---TCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC---CCCce
Confidence            399999999999999999999999999999999887765543 3   3332   247776555554443321   13699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++|+|+|.   .     .                  .+.+++.++.  +|++|.+++..+
T Consensus       212 ~vi~~~g~---~-----~------------------~~~~~~~l~~--~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVGR---D-----T------------------WERSLDCLQR--RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSCG---G-----G------------------HHHHHHTEEE--EEEEEECCCTTC
T ss_pred             EEEECCch---H-----H------------------HHHHHHHhcC--CCEEEEEecCCC
Confidence            99999982   1     0                  2334444433  589999987654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.17  E-value=6.6e-06  Score=78.27  Aligned_cols=78  Identities=18%  Similarity=0.240  Sum_probs=57.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||.++++.+...|++|++++|++++++.+ +++   +...   .+|.++.+..+++.+.. .  ++++|
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~~d  233 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFT-K--GAGVN  233 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHT-T--TSCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHh-c--CCCce
Confidence            3999999999999999999999999999999998877665 333   4332   24666654444433322 1  13699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|+|+|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999993

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.17  E-value=2.5e-06  Score=80.74  Aligned_cols=78  Identities=5%  Similarity=0.209  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||+||+||||.++++.+...|++|++++|++++++.+.+++   +...   .+|.++.+++.+.+.++.   ++++|
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~~d  227 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCF---PNGID  227 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHC---TTCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHh---CCCCc
Confidence            39999999999999999999999999999999988776554333   4332   237766544444444432   14699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|+|+|
T Consensus       228 ~vi~~~g  234 (345)
T 2j3h_A          228 IYFENVG  234 (345)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.16  E-value=1.2e-05  Score=79.02  Aligned_cols=108  Identities=15%  Similarity=0.151  Sum_probs=73.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEc--cCC---------CHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--DLS---------SREQREKLME   79 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~--Dls---------d~~sv~~~~~   79 (367)
                      .+|||+||+|+||.++++.+...|++|+++++++++.+.+ +++   |....+-..  |+.         +.++.+++.+
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEEecccccccccccccccccchhhhHHHH
Confidence            3999999999999999999999999999999998877655 333   443322211  221         2345555666


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++.+..++++|++|+++|.           +.               .+.+++.+  +.+|+||++++..+
T Consensus       298 ~v~~~~g~g~Dvvid~~G~-----------~~---------------~~~~~~~l--~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTGR-----------VT---------------FGLSVIVA--RRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHSSCCSEEEECSCH-----------HH---------------HHHHHHHS--CTTCEEEESCCTTC
T ss_pred             HHHHHhCCCceEEEECCCc-----------hH---------------HHHHHHHH--hcCCEEEEEecCCC
Confidence            6666553479999999982           01               13334444  34699999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.14  E-value=8.7e-06  Score=77.00  Aligned_cols=102  Identities=12%  Similarity=0.192  Sum_probs=69.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .++||+||+||||..+++.+...|++|+++++++++.+.+. ++   +...   .+|.++.+..+. +.+...  +.++|
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~~~~-~~~~~~--~~~~d  237 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDWPKE-VRRLTG--GKGAD  237 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTHHHH-HHHHTT--TTCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccHHHH-HHHHhC--CCCce
Confidence            39999999999999999999999999999999988876653 33   4332   247766542222 222221  13699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++|+++| ..       .                  .+.+++.++.  .|++|.+++..+
T Consensus       238 ~vi~~~g-~~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~  269 (343)
T 2eih_A          238 KVVDHTG-AL-------Y------------------FEGVIKATAN--GGRIAIAGASSG  269 (343)
T ss_dssp             EEEESSC-SS-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred             EEEECCC-HH-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence            9999999 21       1                  2333444433  589999987654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.12  E-value=5.3e-06  Score=78.91  Aligned_cols=102  Identities=11%  Similarity=0.159  Sum_probs=70.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||.++++.+...|+ +|+++++++++.+.+.+++   +...   .+|.++.+..+.+ .+.   .++++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~-~~~---~~~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDA---AINYKKDNVAEQL-RES---CPAGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSE---EEETTTSCHHHHH-HHH---CTTCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCce---EEecCchHHHHHH-HHh---cCCCC
Confidence            6999999999999999999999999 9999999987776654433   4332   2477664333332 222   22469


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      |++|+|+|.           +               ..+.+++.++.  +|++|.++...+
T Consensus       232 d~vi~~~G~-----------~---------------~~~~~~~~l~~--~G~iv~~G~~~~  264 (357)
T 2zb4_A          232 DVYFDNVGG-----------N---------------ISDTVISQMNE--NSHIILCGQISQ  264 (357)
T ss_dssp             EEEEESCCH-----------H---------------HHHHHHHTEEE--EEEEEECCCGGG
T ss_pred             CEEEECCCH-----------H---------------HHHHHHHHhcc--CcEEEEECCccc
Confidence            999999982           1               12234454433  589999987654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.10  E-value=7.8e-06  Score=77.70  Aligned_cols=77  Identities=14%  Similarity=0.236  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++++||||+||||.++++.+...|++|++++|++++.+.+ +++   +...   .+|.++.+..+++.+.. .  +.++|
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~d~~~~~~~~~~~~~~-~--~~~~D  241 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAHE---VFNHREVNYIDKIKKYV-G--EKGID  241 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSTTHHHHHHHHH-C--TTCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---CCCE---EEeCCCchHHHHHHHHc-C--CCCcE
Confidence            3999999999999999999999999999999998877633 332   4332   24776655444433322 1  13699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|+|+|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.10  E-value=1.2e-05  Score=65.70  Aligned_cols=72  Identities=15%  Similarity=0.311  Sum_probs=58.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|+ |.+|+++++.|.++|++|+++++++++.+.+.+.    +  ..++.+|.++++.++++-      . .+.|+
T Consensus         8 ~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----~--~~~~~gd~~~~~~l~~~~------~-~~~d~   73 (141)
T 3llv_A            8 EYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----G--FDAVIADPTDESFYRSLD------L-EGVSA   73 (141)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----T--CEEEECCTTCHHHHHHSC------C-TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----C--CcEEECCCCCHHHHHhCC------c-ccCCE
Confidence            7999998 7899999999999999999999998876655432    2  556788999998776541      1 46899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|.+.+
T Consensus        74 vi~~~~   79 (141)
T 3llv_A           74 VLITGS   79 (141)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            998776

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.09  E-value=7.5e-05  Score=70.23  Aligned_cols=113  Identities=19%  Similarity=0.174  Sum_probs=74.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~--~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +|+||||+|++|.+++..|+++|  ..|++++++++  +....++.....  ++..    +++..+..+++        .
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------~   75 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------T   75 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------C
Confidence            79999999999999999999999  78999998876  333334433221  2222    22344444444        5


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..|++|++||......   .+.   .+.+..|+.++..+.+.+.++   ...+.|++.|-
T Consensus        76 gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SN  126 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISN  126 (326)
T ss_dssp             TCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             CCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence            6899999999653221   111   245788999999998888765   23355555443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.06  E-value=3.6e-06  Score=68.55  Aligned_cols=73  Identities=14%  Similarity=0.216  Sum_probs=55.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|+ |++|+.+++.|.+.|++|++++|++++.+.+.    ..+  ...+.+|.++.+.+.++      .. ++.|+
T Consensus         8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~--~~~~~~d~~~~~~l~~~------~~-~~~d~   73 (144)
T 2hmt_A            8 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSL------GI-RNFEY   73 (144)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC--SEEEECCTTCHHHHHTT------TG-GGCSE
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC--CEEEEeCCCCHHHHHhc------CC-CCCCE
Confidence            7999998 99999999999999999999999976654322    222  24567899887665443      12 46899


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|++++.
T Consensus        74 vi~~~~~   80 (144)
T 2hmt_A           74 VIVAIGA   80 (144)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999883

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.04  E-value=8.9e-06  Score=76.62  Aligned_cols=77  Identities=12%  Similarity=0.171  Sum_probs=57.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||+||+||||.++++.+...|++|++++|++++.+.+.+++   +....   .|.++.+..+.+.+.    .++++|
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~~~~~~~----~~~~~d  220 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDGA---IDYKNEDLAAGLKRE----CPKGID  220 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSEE---EETTTSCHHHHHHHH----CTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCEE---EECCCHHHHHHHHHh----cCCCce
Confidence            39999999999999999999999999999999998876654443   43322   366664433333322    225799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|+|+|
T Consensus       221 ~vi~~~g  227 (336)
T 4b7c_A          221 VFFDNVG  227 (336)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.02  E-value=1.1e-05  Score=73.82  Aligned_cols=76  Identities=11%  Similarity=0.288  Sum_probs=57.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+.  ..|+   +++       .+   
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~---  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG---  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc---
Confidence            4555 9999998 799999999999999999999999999888887765422 222  1333   211       11   


Q ss_pred             CCccEEEEcCCCCC
Q 035642           87 GKLNLLVNNAAVAV  100 (367)
Q Consensus        87 g~iD~lI~~Ag~~~  100 (367)
                      ++.|++|||++...
T Consensus       179 ~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 HEFDLIINATSSGI  192 (271)
T ss_dssp             CCCSEEEECCSCGG
T ss_pred             CCCCEEEECCCCCC
Confidence            36999999999754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.97  E-value=4.2e-05  Score=71.51  Aligned_cols=146  Identities=13%  Similarity=0.069  Sum_probs=89.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeC--ChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSR--NQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R--~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +|+||||+|++|.+++..|+..|.  .++++++  ++++++....++...    +..+.+...|    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            589999999999999999998885  6888998  765555433444321    1122222111    1122222     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc--------CCC
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT--------AAP  155 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~--------~~~  155 (367)
                         ...|+|||+||.....   ..+.   ...+..|+.++..+.+++..+   . .+.|+++|......        +.+
T Consensus        73 ---~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~---~-~~~vlv~SNPv~~~t~~~~k~~~~p  139 (313)
T 1hye_A           73 ---DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI---C-DTKIFVITNPVDVMTYKALVDSKFE  139 (313)
T ss_dssp             ---TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---C-CCEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             ---CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh---C-CeEEEEecCcHHHHHHHHHHhhCcC
Confidence               5689999999975322   1232   345889999999999988775   2 45566665543321        233


Q ss_pred             CCccHHH-HHHHHHHHHHHHHHHhC
Q 035642          156 LTPLYGP-YNGAMNQLTKHLECEQA  179 (367)
Q Consensus       156 ~~~~Y~a-sKaal~~l~~~la~e~~  179 (367)
                      ..-.++. +..-...+...+++.++
T Consensus       140 ~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          140 RNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             TTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             hhcEEEeCccHHHHHHHHHHHHHhC
Confidence            3334444 44445566666776664

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.91  E-value=5.9e-05  Score=71.61  Aligned_cols=77  Identities=17%  Similarity=0.291  Sum_probs=57.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+.+ +   +....   +|.++.+..+.+.+..    ++++|
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~~~----~~g~D  237 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKAET----GQGVD  237 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHH----SSCEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHHHh----CCCce
Confidence            399999999999999999999999999999999988765543 3   44332   3655544433333322    26799


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|+|+|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999983

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.89  E-value=2.8e-05  Score=71.65  Aligned_cols=80  Identities=13%  Similarity=0.144  Sum_probs=59.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ +++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++......+.+...+..+   +.+.+       
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l-------  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI-------  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH-------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH-------
Confidence            4556 9999998 8999999999999999 79999999999999988886543222222334333   33333       


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                       ...|+|||+....
T Consensus       193 -~~~DiVInaTp~G  205 (283)
T 3jyo_A          193 -AAADGVVNATPMG  205 (283)
T ss_dssp             -HHSSEEEECSSTT
T ss_pred             -hcCCEEEECCCCC
Confidence             2469999998654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.86  E-value=3.5e-05  Score=72.88  Aligned_cols=78  Identities=12%  Similarity=0.213  Sum_probs=55.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++|||||+||||..+++.+... |++|+++++++++.+.+. ++   +....   +|.++.+..+++. ++...  +++
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~~~-~~~~~--~~~  241 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADYV---INASMQDPLAEIR-RITES--KGV  241 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHHH-HHTTT--SCE
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCEE---ecCCCccHHHHHH-HHhcC--CCc
Confidence            39999999999999999999998 999999999988776553 33   43322   3666544333322 22111  479


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|+|+|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999993

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.85  E-value=3.8e-05  Score=71.99  Aligned_cols=78  Identities=13%  Similarity=0.170  Sum_probs=56.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||+||+|+||.++++.+...|++|+++++++++.+.+. ++   +....   .|.++.+..+.+.+.. .  +.++|
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~~~~~~-~--~~g~D  211 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKRVLELT-D--GKKCP  211 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHHHHHT-T--TCCEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHHHHHHh-C--CCCce
Confidence            39999999999999999999999999999999988876554 33   43332   3555544333333222 1  13699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++++|+|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999994

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.83  E-value=0.00012  Score=60.55  Aligned_cols=76  Identities=11%  Similarity=0.103  Sum_probs=58.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +.++|.|+ |.+|+.+++.|.+.|+.|++++++ +++.+.+.+..   ...+.++.+|.++++.+.++-      . .+.
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~------i-~~a   72 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAG------I-DRC   72 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHT------T-TTC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcC------h-hhC
Confidence            47899986 999999999999999999999997 45554444333   224677889999988766541      1 468


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99998876

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.83  E-value=4.4e-05  Score=72.81  Aligned_cols=96  Identities=21%  Similarity=0.272  Sum_probs=65.4

Q ss_pred             C-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 Q-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      + +|||+|| |+||..+++.+...|++|++++++.   ++.+.+ +++   +..  .+  | .+ +-.+++. + .  . 
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga~--~v--~-~~-~~~~~~~-~-~--~-  244 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KTN--YY--N-SS-NGYDKLK-D-S--V-  244 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TCE--EE--E-CT-TCSHHHH-H-H--H-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CCc--ee--c-hH-HHHHHHH-H-h--C-
Confidence            5 9999999 9999999999999999999999998   666433 333   432  22  5 54 2222222 2 1  1 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHH-HHHHHHHHcCCCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS-KLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~-~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      +++|++|+++|...                         .+ +.+++.|+.  +|+||+++...
T Consensus       245 ~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~  281 (366)
T 2cdc_A          245 GKFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFST  281 (366)
T ss_dssp             CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCC
T ss_pred             CCCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCC
Confidence            57999999998421                         12 444555533  58999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.83  E-value=9.2e-05  Score=70.05  Aligned_cols=77  Identities=10%  Similarity=0.123  Sum_probs=55.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||+||+|+||..+++.+...|++|+++++++++.+.+. ++   |....   .|..+.+..+.+. +....  .++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~v~-~~~~~--~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEATLR-EVMKA--EQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHHHH-HHHHH--HCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHHHH-HHhcC--CCCc
Confidence            38999999999999999999999999999999998876554 33   44332   3555544333333 33221  3699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++++++|
T Consensus       236 ~vid~~g  242 (349)
T 3pi7_A          236 IFLDAVT  242 (349)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.82  E-value=0.0001  Score=68.77  Aligned_cols=82  Identities=20%  Similarity=0.195  Sum_probs=60.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC---hhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN---QTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~---~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      +++++ +++|+|+ ||+|++++..|++.|+ +|.++.|+   .++++++.+++... +..+.  ..+..+.+...+.+  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l--  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL--  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc--
Confidence            34556 9999998 8999999999999999 89999999   88888888887653 22233  33555543333322  


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 035642           81 VSSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~   99 (367)
                            ...|+|||+....
T Consensus       219 ------~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ------ASADILTNGTKVG  231 (312)
T ss_dssp             ------HHCSEEEECSSTT
T ss_pred             ------cCceEEEECCcCC
Confidence                  2469999987654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.81  E-value=0.00014  Score=67.72  Aligned_cols=112  Identities=10%  Similarity=-0.002  Sum_probs=73.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeC--ChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSR--NQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R--~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++||||+|++|.+++..|+..|.  .+++.++  ++++++....++...   ...+.+.. |  +.    +.+      
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~----~a~------   68 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY----EDT------   68 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG----GGG------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH----HHh------
Confidence            689999999999999999999886  6889999  776665544454432   22222222 2  21    112      


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                        ...|++||+||.....   ..+.+   +.+..|+.++..+.+.+..+   ...+.|+++|.
T Consensus        69 --~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SN  120 (303)
T 1o6z_A           69 --AGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTSN  120 (303)
T ss_dssp             --TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECCS
T ss_pred             --CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCC
Confidence              5689999999974321   12332   45788998888888877653   22355555443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.81  E-value=0.00017  Score=65.98  Aligned_cols=76  Identities=13%  Similarity=0.221  Sum_probs=56.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+...+ .+..  +|+.   ++.       +   
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~~---~~~-------~---  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSMD---SIP-------L---  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEGG---GCC-------C---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeHH---Hhc-------c---
Confidence            4455 9999998 899999999999999999999999999998888875432 2322  2331   110       0   


Q ss_pred             CCccEEEEcCCCCC
Q 035642           87 GKLNLLVNNAAVAV  100 (367)
Q Consensus        87 g~iD~lI~~Ag~~~  100 (367)
                      +..|++||+++...
T Consensus       179 ~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 QTYDLVINATSAGL  192 (272)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             CCCCEEEECCCCCC
Confidence            36899999999754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.80  E-value=4.4e-05  Score=72.01  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=56.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +....   .|.++.+..+++.+ ...  +.++|
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~~~~~-~~~--~~g~D  215 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYETVME-LTN--GIGAD  215 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HTT--TSCEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHHHHHH-HhC--CCCCc
Confidence            399999999999999999999999999999999888765543 3   44432   35555443333332 211  13699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|+|+|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999983

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.79  E-value=9.2e-05  Score=69.79  Aligned_cols=98  Identities=18%  Similarity=0.195  Sum_probs=67.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+|| ||||..+++.+...|++|+++++++++.+.+. ++   +...   .+|.++.+-.+. +.+.   . +++|+
T Consensus       167 ~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~d~~~~~~~~~-~~~~---~-~~~d~  233 (339)
T 1rjw_A          167 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---GADL---VVNPLKEDAAKF-MKEK---V-GGVHA  233 (339)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---TCSE---EECTTTSCHHHH-HHHH---H-SSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---CCCE---EecCCCccHHHH-HHHH---h-CCCCE
Confidence            9999999 88999999999999999999999988876543 22   4432   247665432222 2222   2 56999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      +|+++|..          +               .++.+++.++.  .|+++.+++..
T Consensus       234 vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~  264 (339)
T 1rjw_A          234 AVVTAVSK----------P---------------AFQSAYNSIRR--GGACVLVGLPP  264 (339)
T ss_dssp             EEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred             EEECCCCH----------H---------------HHHHHHHHhhc--CCEEEEecccC
Confidence            99999831          1               12334455433  58999998754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.79  E-value=4.7e-05  Score=71.62  Aligned_cols=78  Identities=12%  Similarity=0.180  Sum_probs=55.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++||+||+|+||.++++.+...|++|+++++++++.+.+ +++   +....   .|.++.+..+.+.+.. .  +.++|
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~~---~~~~~~~~~~~~~~~~-~--~~g~D  219 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---GAEYL---INASKEDILRQVLKFT-N--GKGVD  219 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSEE---EETTTSCHHHHHHHHT-T--TSCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCcEE---EeCCCchHHHHHHHHh-C--CCCce
Confidence            3999999999999999999999999999999998877643 333   43332   3555544333333221 1  13699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++++|+|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.79  E-value=0.0001  Score=59.53  Aligned_cols=73  Identities=12%  Similarity=0.060  Sum_probs=55.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+..   +  +.++..|.++++.+.+.      .. .+.|+
T Consensus         6 ~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~--~~~~~~d~~~~~~l~~~------~~-~~~d~   72 (140)
T 1lss_A            6 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---D--ALVINGDCTKIKTLEDA------GI-EDADM   72 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---S--SEEEESCTTSHHHHHHT------TT-TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---C--cEEEEcCCCCHHHHHHc------Cc-ccCCE
Confidence            7899987 99999999999999999999999987765544321   2  34567798887765432      12 46899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|++.+
T Consensus        73 vi~~~~   78 (140)
T 1lss_A           73 YIAVTG   78 (140)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.78  E-value=7.9e-05  Score=71.09  Aligned_cols=74  Identities=22%  Similarity=0.318  Sum_probs=55.1

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      .+ +|+|+|+ |+||..+++.+...|++|+++++++++.+.+.+++   |....   .|..+.+.+.++       . +.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v---~~~~~~~~~~~~-------~-~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADSF---LVSRDQEQMQAA-------A-GT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSEE---EETTCHHHHHHT-------T-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCceE---EeccCHHHHHHh-------h-CC
Confidence            34 9999996 99999999999999999999999988876654333   44322   366665433322       2 57


Q ss_pred             ccEEEEcCCC
Q 035642           89 LNLLVNNAAV   98 (367)
Q Consensus        89 iD~lI~~Ag~   98 (367)
                      +|++|+++|.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999985

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.77  E-value=0.00017  Score=68.70  Aligned_cols=73  Identities=21%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|+|+ ||+|+++++.+...|++|++++|+.++++.+.+....   .+.   ++..+.+++.+.+        ...|+
T Consensus       169 ~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~--------~~~Dv  233 (361)
T 1pjc_A          169 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV--------AEADL  233 (361)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------HTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHH--------cCCCE
Confidence            9999999 9999999999999999999999999988777655422   211   1223444444333        35899


Q ss_pred             EEEcCCCC
Q 035642           92 LVNNAAVA   99 (367)
Q Consensus        92 lI~~Ag~~   99 (367)
                      +|++++..
T Consensus       234 VI~~~~~~  241 (361)
T 1pjc_A          234 LIGAVLVP  241 (361)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCcC
Confidence            99999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.76  E-value=9.5e-05  Score=69.81  Aligned_cols=76  Identities=18%  Similarity=0.285  Sum_probs=54.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      .+|||+||+|+||..+++.+...|++|++++++.++.+.+.+ +   +....   .|..  +++.+.+.+.   .++ ++
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~v---~~~~--~~~~~~v~~~---~~~~g~  228 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADIV---LPLE--EGWAKAVREA---TGGAGV  228 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EESS--TTHHHHHHHH---TTTSCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---ecCc--hhHHHHHHHH---hCCCCc
Confidence            399999999999999999999999999999999888765443 3   43332   2443  2333333322   223 69


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++++++|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999994

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.74  E-value=0.00012  Score=71.96  Aligned_cols=82  Identities=11%  Similarity=0.153  Sum_probs=60.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEc--c--------CCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVC--D--------LSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~--D--------lsd~~sv~~~~~~~   81 (367)
                      +|+|+||+|+||...++.+...|++|+++++++++++.+ +++   |....+-..  |        .++.++++++.+++
T Consensus       231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            999999999999999999999999999999988877655 333   443322111  1        24556666777777


Q ss_pred             HHHcCC-CccEEEEcCC
Q 035642           82 SSIFQG-KLNLLVNNAA   97 (367)
Q Consensus        82 ~~~~~g-~iD~lI~~Ag   97 (367)
                      .+..++ ++|+++.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            665533 7999999998

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.73  E-value=0.00019  Score=68.91  Aligned_cols=77  Identities=18%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .+.+ +++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+   +..+   .++.++.+++.+++        
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l--------  229 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAV--------  229 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHH--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHH--------
Confidence            3556 9999998 99999999999999999999999998877665443   3222   12444555555544        


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      ...|++|++++..
T Consensus       230 ~~aDvVi~~~~~p  242 (377)
T 2vhw_A          230 KRADLVIGAVLVP  242 (377)
T ss_dssp             HHCSEEEECCCCT
T ss_pred             cCCCEEEECCCcC
Confidence            2479999998853

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.68  E-value=0.00013  Score=69.65  Aligned_cols=70  Identities=20%  Similarity=0.181  Sum_probs=57.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|| |++|+.+++.|++ .+.|.+++++.++++++.       ..+..+.+|++|.+++.+++        .+.|+
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~--------~~~Dv   80 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVM--------KEFEL   80 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHH--------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHH--------hCCCE
Confidence            7999998 9999999998865 579999999988776542       23456788999999988887        46899


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ||++++.
T Consensus        81 Vi~~~p~   87 (365)
T 3abi_A           81 VIGALPG   87 (365)
T ss_dssp             EEECCCG
T ss_pred             EEEecCC
Confidence            9999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.67  E-value=0.00012  Score=69.76  Aligned_cols=101  Identities=10%  Similarity=0.166  Sum_probs=68.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   |....   .|..+.+ +.+.+.+.   .++++|
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~~~---~~~~~~~-~~~~~~~~---~~~g~D  233 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L---GCDRP---INYKTEP-VGTVLKQE---YPEGVD  233 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSEE---EETTTSC-HHHHHHHH---CTTCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c---CCcEE---EecCChh-HHHHHHHh---cCCCCC
Confidence            399999999999999999999999999999999877665433 2   44332   2544432 33333322   224699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ++|+++|.           +               ..+.+++.++.  .|++|.+++..+
T Consensus       234 ~vid~~g~-----------~---------------~~~~~~~~l~~--~G~iv~~g~~~~  265 (362)
T 2c0c_A          234 VVYESVGG-----------A---------------MFDLAVDALAT--KGRLIVIGFISG  265 (362)
T ss_dssp             EEEECSCT-----------H---------------HHHHHHHHEEE--EEEEEECCCGGG
T ss_pred             EEEECCCH-----------H---------------HHHHHHHHHhc--CCEEEEEeCCCC
Confidence            99999982           0               12233444433  589999988654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00018  Score=58.79  Aligned_cols=77  Identities=12%  Similarity=0.101  Sum_probs=60.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      -++++.++|.|+ |.+|..+++.|.+.|+.|+++++++++.+.+.+    .  .+.++.+|.++++.+.++-      . 
T Consensus         4 ~~~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a~------i-   69 (140)
T 3fwz_A            4 VDICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLAH------L-   69 (140)
T ss_dssp             CCCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHTT------G-
T ss_pred             ccCCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhcC------c-
Confidence            345668999997 889999999999999999999999987765543    2  3456778999998766531      1 


Q ss_pred             CCccEEEEcCC
Q 035642           87 GKLNLLVNNAA   97 (367)
Q Consensus        87 g~iD~lI~~Ag   97 (367)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (140)
T 3fwz_A           70 ECAKWLILTIP   80 (140)
T ss_dssp             GGCSEEEECCS
T ss_pred             ccCCEEEEECC
Confidence            45788888776

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.66  E-value=8.5e-05  Score=68.91  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.+ +++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+......  .     .+.+++.+       ..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~--~-----~~~~~~~~-------~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA--Y-----FSLAEAET-------RL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC--E-----ECHHHHHH-------TG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc--e-----eeHHHHHh-------hh
Confidence            4555 9999998 7999999999999998 9999999999988887765321111  1     12222222       22


Q ss_pred             CCCccEEEEcCCCCC
Q 035642           86 QGKLNLLVNNAAVAV  100 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~  100 (367)
                       ...|+|||+.+...
T Consensus       203 -~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 -AEYDIIINTTSVGM  216 (297)
T ss_dssp             -GGCSEEEECSCTTC
T ss_pred             -ccCCEEEECCCCCC
Confidence             56899999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.58  E-value=0.0004  Score=65.55  Aligned_cols=103  Identities=10%  Similarity=0.114  Sum_probs=67.6

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+ +|||+|| |+||..+++.+...|+ +|+++++++++.+.+. ++   +....   .|..+.+ +.+.+.++..  +.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~-~~~~v~~~~~--g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADYV---INPFEED-VVKEVMDITD--GN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC-HHHHHHHHTT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCCcC-HHHHHHHHcC--CC
Confidence            44 9999999 9999999999999999 9999999987766543 33   43322   3555433 2222222211  12


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      .+|++|+++|.          .+               .++.+++.++.  .|++|.+++...
T Consensus       236 g~D~vid~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~~  271 (348)
T 2d8a_A          236 GVDVFLEFSGA----------PK---------------ALEQGLQAVTP--AGRVSLLGLYPG  271 (348)
T ss_dssp             CEEEEEECSCC----------HH---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             CCCEEEECCCC----------HH---------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence            69999999983          11               22344455533  589999987543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.58  E-value=0.00038  Score=65.72  Aligned_cols=74  Identities=11%  Similarity=0.153  Sum_probs=53.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   |....   .|..+  ++.+.+.+.   .++.+|+
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~~~~~~~~~---~~~g~Dv  220 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--SLLNQFKTQ---GIELVDY  220 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--CHHHHHHHH---TCCCEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--cHHHHHHHh---CCCCccE
Confidence            99999999999999999999999999999999887765543 3   43322   24433  222223222   3257999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +++++|
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.55  E-value=0.0014  Score=62.05  Aligned_cols=79  Identities=14%  Similarity=0.049  Sum_probs=56.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|| |++|...++.+...|++ |+++++++++.+.+.+ +   ...+..+..|-.+.+++.+.+.+...  +.++|
T Consensus       182 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~~~v~~~t~--g~g~D  254 (363)
T 3m6i_A          182 PVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESAKKIVESFG--GIEPA  254 (363)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHHHHHHHHTS--SCCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHHHHHHHHhC--CCCCC
Confidence            9999998 99999999988899997 9999999888765543 3   22333444454555555544444322  13699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.++|
T Consensus       255 vvid~~g  261 (363)
T 3m6i_A          255 VALECTG  261 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.55  E-value=0.00054  Score=62.93  Aligned_cols=75  Identities=11%  Similarity=0.170  Sum_probs=57.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++++ +++|+|+ ||+|++++..|++.|+ +|.+++|+.++++++.+++...+ .+.....+  +   +          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l----------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---L----------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---C----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---h----------
Confidence            34556 9999998 7999999999999996 99999999999999988886543 34443321  1   0          


Q ss_pred             cCCCccEEEEcCCCC
Q 035642           85 FQGKLNLLVNNAAVA   99 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~   99 (367)
                      . ...|++||+.+..
T Consensus       185 ~-~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 K-QSYDVIINSTSAS  198 (281)
T ss_dssp             C-SCEEEEEECSCCC
T ss_pred             c-CCCCEEEEcCcCC
Confidence            0 3589999988754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.51  E-value=0.00026  Score=66.75  Aligned_cols=74  Identities=23%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|||+||+|+||..+++.+...|++|+++ ++.++.+.+ +++   |...    +| .+.+ +.+.+.+....  .++|
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~~-~~~~~~~~~~~--~g~D  218 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASRE-PEDYAAEHTAG--QGFD  218 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTSC-HHHHHHHHHTT--SCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCCC-HHHHHHHHhcC--CCce
Confidence            399999999999999999999999999999 777776543 333   4433    34 3333 33333333221  3699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++++++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.48  E-value=0.00048  Score=62.97  Aligned_cols=75  Identities=12%  Similarity=0.125  Sum_probs=56.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++++ +++|+|+ ||+|++++..|++.|+ +|.+++|+.++++++.+++..  ..+....  +.+   +.       . 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c-
Confidence            34556 9999998 7999999999999996 999999999999999888753  2344332  221   11       0 


Q ss_pred             cCCCccEEEEcCCCC
Q 035642           85 FQGKLNLLVNNAAVA   99 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~   99 (367)
                        ...|++||+....
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              2579999997653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.44  E-value=0.00014  Score=60.38  Aligned_cols=75  Identities=13%  Similarity=0.075  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+   ..+  ...+..|.++++.+.++      .. ...
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------~~-~~a   85 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------GM-EKA   85 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------TG-GGC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------Cc-ccC
Confidence            348999996 999999999999999999999999877543321   112  34566788886554332      01 458


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |++|.+.+
T Consensus        86 d~Vi~~~~   93 (155)
T 2g1u_A           86 DMVFAFTN   93 (155)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEEeC
Confidence            99999887

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.37  E-value=0.00096  Score=62.99  Aligned_cols=116  Identities=15%  Similarity=0.125  Sum_probs=73.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|.|+||+|++|.++|..++..|.  .|++++.++++++....++......    ..++.-..+..+.+        ...
T Consensus        10 KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al--------~dA   77 (343)
T 3fi9_A           10 KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL--------TDA   77 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH--------TTE
T ss_pred             EEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh--------CCC
Confidence            899999999999999999999994  7999999998887766666542100    01111111222222        468


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC-EEEEecCc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG-IIVFISSV  148 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g-~IV~iSS~  148 (367)
                      |++|.+||.....   ..+   -.+.+..|..-...+.+.+.++   ...+ .|+++|-.
T Consensus        78 DvVvitaG~p~kp---G~~---R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNP  128 (343)
T 3fi9_A           78 KYIVSSGGAPRKE---GMT---REDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNP  128 (343)
T ss_dssp             EEEEECCC----------C---HHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSS
T ss_pred             CEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCc
Confidence            9999999964221   112   2455677877777777766654   2346 36676643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.36  E-value=0.0016  Score=60.76  Aligned_cols=115  Identities=18%  Similarity=0.149  Sum_probs=74.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~~--~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +|.|+||+|.+|..++..|+..|  ..|+++++++  .+....++.....  ++....    ..++.++++        .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~--------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL--------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH--------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh--------C
Confidence            58999999999999999999988  6899999987  3334444543211  222211    012233333        4


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ..|++|++||......   .+.   .+.+..|+.....+.+.+.++   ...++|+++|-..
T Consensus        68 ~aDvVvi~ag~~~~~g---~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv  120 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPV  120 (314)
T ss_dssp             TCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred             CCCEEEECCCcCCCCC---CcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCc
Confidence            6899999999753221   121   134677877777777777665   3457888876543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.36  E-value=0.00052  Score=60.25  Aligned_cols=73  Identities=15%  Similarity=0.065  Sum_probs=58.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+ |.+|.++++.|.++|+.|+++++++++.+.+.+..     ...++.+|.++++.++++-      . ...|+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~------i-~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAE------V-SKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHT------C-CTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcC------c-ccCCE
Confidence            4899997 99999999999999999999999998877654432     3457888999988776541      1 56899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            987765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.36  E-value=0.00034  Score=59.60  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=55.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|.|+ |.+|..+++.|.+. |+.|+++++++++.+.+.    ..+  +..+.+|.++++.+.++.     .. .+.|
T Consensus        41 ~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~~-----~~-~~ad  107 (183)
T 3c85_A           41 QVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERIL-----DT-GHVK  107 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTBC-----SC-CCCC
T ss_pred             cEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhcc-----CC-CCCC
Confidence            8999985 99999999999999 999999999988766543    223  345667999887654430     01 4689


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9998776

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.35  E-value=0.0031  Score=59.51  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=52.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|+ |++|..+++.+...|++|+++++++++.+.+. ++   |....   .|.++ .+..+++.+......++++|
T Consensus       171 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~~---~~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          171 TVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC---GADVT---LVVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSEE---EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh---CCCEE---EcCcccccHHHHHHHHhccccCCCCC
Confidence            9999997 99999999988899999999999988766543 32   44422   24443 22223332222100114699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|+++|
T Consensus       243 ~vid~~g  249 (352)
T 1e3j_A          243 VTIDCSG  249 (352)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.32  E-value=0.00045  Score=63.82  Aligned_cols=71  Identities=15%  Similarity=0.260  Sum_probs=52.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++|+||+|++|..+++.+...|++|+++++++++.+.+. ++   +....   .|..+ .+    +.+++     +++
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~~---~~~~~~~~----~~~~~-----~~~  190 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---GAEEA---ATYAEVPE----RAKAW-----GGL  190 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---TCSEE---EEGGGHHH----HHHHT-----TSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCEE---EECCcchh----HHHHh-----cCc
Confidence            39999999999999999999999999999999988776543 22   43322   35544 22    22222     469


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 883

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.31  E-value=0.00024  Score=66.89  Aligned_cols=116  Identities=9%  Similarity=0.075  Sum_probs=75.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--E-----EEEEeCCh--hHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--I-----IHTCSRNQ--TELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~-----Vi~~~R~~--~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.||||+|+||.+++..|+..|.  .     ++++++++  ++++....++.... .-..-+.  .++  ...+.+   
T Consensus         5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~~~~---   77 (333)
T 5mdh_A            5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEEIAF---   77 (333)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcHHHh---
Confidence            799999999999999999998875  4     99999974  45666666665532 2221111  111  112222   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCC-EEEEecCc
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNG-IIVFISSV  148 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g-~IV~iSS~  148 (367)
                           ...|++|++||.....   ..+   -.+.++.|+.....+.+.+.++   ...+ +|+++|-.
T Consensus        78 -----~daDvVvitAg~prkp---G~t---R~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvsNP  131 (333)
T 5mdh_A           78 -----KDLDVAILVGSMPRRD---GME---RKDLLKANVKIFKCQGAALDKY---AKKSVKVIVVGNP  131 (333)
T ss_dssp             -----TTCSEEEECCSCCCCT---TCC---TTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSS
T ss_pred             -----CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcCCc
Confidence                 5689999999964321   112   2356778888888887777654   2235 67777764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.0022  Score=61.03  Aligned_cols=77  Identities=14%  Similarity=0.189  Sum_probs=53.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~   88 (367)
                      .+|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++   |....   +|.++ .+++.+.+.++..   ++
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~~~~~~---~g  262 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GATDF---VNPNDHSEPISQVLSKMTN---GG  262 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCCEE---ECGGGCSSCHHHHHHHHHT---SC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCceE---EeccccchhHHHHHHHHhC---CC
Confidence            39999996 9999999998889999 8999999988876543 33   43322   24442 1223333333322   57


Q ss_pred             ccEEEEcCCC
Q 035642           89 LNLLVNNAAV   98 (367)
Q Consensus        89 iD~lI~~Ag~   98 (367)
                      +|++|+++|.
T Consensus       263 ~D~vid~~g~  272 (374)
T 1cdo_A          263 VDFSLECVGN  272 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.00037  Score=65.18  Aligned_cols=75  Identities=17%  Similarity=0.164  Sum_probs=51.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|++|..+++.+...|++|+.+++++++.+.+. ++   |....   +|..+.+  .+.++++   .++++|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~~---i~~~~~~--~~~~~~~---~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---GAKEV---LAREDVM--AERIRPL---DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---TCSEE---EECC-----------C---CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---CCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence            8999999999999999999999999999999988776553 23   44332   2554432  2222222   1146999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|+++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.21  E-value=0.00094  Score=63.69  Aligned_cols=73  Identities=16%  Similarity=0.304  Sum_probs=50.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|+||+|+||..+++.+...|++|+.++ +.++.+.+ +++   |....   .|..+.+..+    ++.+ . +++|+
T Consensus       186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~v---~~~~~~~~~~----~~~~-~-~g~D~  251 (375)
T 2vn8_A          186 RVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL---GADDV---IDYKSGSVEE----QLKS-L-KPFDF  251 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT---TCSEE---EETTSSCHHH----HHHT-S-CCBSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc---CCCEE---EECCchHHHH----HHhh-c-CCCCE
Confidence            999999999999999999999999999988 45554433 333   44432   2555433222    2222 2 57999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|+++|.
T Consensus       252 vid~~g~  258 (375)
T 2vn8_A          252 ILDNVGG  258 (375)
T ss_dssp             EEESSCT
T ss_pred             EEECCCC
Confidence            9999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.21  E-value=0.00063  Score=64.07  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=53.0

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+ +|||+|| |++|..+++.+...|+ +|+.+++++++.+.+.+ +    ...   ..|..+. ++.+.+.++.   ++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~-~~~~~~~~~~---~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEE-DLLEVVRRVT---GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTS-CHHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCcc-CHHHHHHHhc---CC
Confidence            44 9999999 9999999999889999 89999999877654322 1    111   1355543 2333333332   25


Q ss_pred             CccEEEEcCCC
Q 035642           88 KLNLLVNNAAV   98 (367)
Q Consensus        88 ~iD~lI~~Ag~   98 (367)
                      ++|++|+++|.
T Consensus       231 g~D~vid~~g~  241 (343)
T 2dq4_A          231 GVEVLLEFSGN  241 (343)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.20  E-value=0.0013  Score=62.36  Aligned_cols=76  Identities=13%  Similarity=0.131  Sum_probs=54.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|||+| +|+||..+++.+...|++|+++++++++.+.+ +++   |....   .| .+.+++.+.+.++...  .++|
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~~v~~~~~g--~g~D  259 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVERVYALTGD--RGAD  259 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHHHHHHHHTT--CCEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHHHHHHHhCC--CCce
Confidence            3999999 89999999999999999999999998877654 333   44332   25 3333333333333321  3699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.++|
T Consensus       260 ~vid~~g  266 (363)
T 3uog_A          260 HILEIAG  266 (363)
T ss_dssp             EEEEETT
T ss_pred             EEEECCC
Confidence            9999998

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.18  E-value=0.0029  Score=60.21  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=52.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~   88 (367)
                      .+|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++   |....   .|..+ .+++.+.+.++   .+++
T Consensus       193 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~~~~---~~~g  261 (374)
T 2jhf_A          193 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATEC---VNPQDYKKPIQEVLTEM---SNGG  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHH---TTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCceE---ecccccchhHHHHHHHH---hCCC
Confidence            39999995 9999999999889999 8999999988876543 33   44322   24432 12233333333   2247


Q ss_pred             ccEEEEcCCC
Q 035642           89 LNLLVNNAAV   98 (367)
Q Consensus        89 iD~lI~~Ag~   98 (367)
                      +|++|.++|.
T Consensus       262 ~D~vid~~g~  271 (374)
T 2jhf_A          262 VDFSFEVIGR  271 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999983

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.16  E-value=0.0032  Score=59.97  Aligned_cols=76  Identities=12%  Similarity=0.119  Sum_probs=52.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|||+|+ |+||..+++.+...|+ +|+.+++++++.+.+. ++   |....   .|.++ .+++.+.+.++.   ++.+
T Consensus       198 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~~~v~~~~---~~g~  266 (376)
T 1e3i_A          198 TCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL---GATDC---LNPRELDKPVQDVITELT---AGGV  266 (376)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHHH---TSCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCcEE---EccccccchHHHHHHHHh---CCCc
Confidence            9999996 9999999998888999 8999999988876543 33   44322   24432 122333333332   2579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|.++|.
T Consensus       267 Dvvid~~G~  275 (376)
T 1e3i_A          267 DYSLDCAGT  275 (376)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999983

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.14  E-value=0.00027  Score=57.89  Aligned_cols=71  Identities=7%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .++++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+++.   ...  .  +..+   +.+++        ...
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~--~--~~~~---~~~~~--------~~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEY--V--LIND---IDSLI--------KNN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEE--E--ECSC---HHHHH--------HTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cce--E--eecC---HHHHh--------cCC
Confidence            348999996 999999999999999999999999998888777663   221  1  2333   23333        347


Q ss_pred             cEEEEcCCCC
Q 035642           90 NLLVNNAAVA   99 (367)
Q Consensus        90 D~lI~~Ag~~   99 (367)
                      |++|++.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998754

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.14  E-value=0.0096  Score=56.18  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=51.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCC--CHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS--SREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dls--d~~sv~~~~~~~~~~~~g~   88 (367)
                      +|||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++   |....   .|..  +.++..+   ++.+..+++
T Consensus       174 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~~~---~i~~~~~~g  242 (356)
T 1pl8_A          174 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GADLV---LQISKESPQEIAR---KVEGQLGCK  242 (356)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCSEE---EECSSCCHHHHHH---HHHHHHTSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---EcCcccccchHHH---HHHHHhCCC
Confidence            9999996 9999999988888999 8999999988765443 33   44322   2544  2233322   222222146


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|++|.++|
T Consensus       243 ~D~vid~~g  251 (356)
T 1pl8_A          243 PEVTIECTG  251 (356)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999998

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.12  E-value=0.0031  Score=59.91  Aligned_cols=76  Identities=14%  Similarity=0.170  Sum_probs=52.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ++   |....   .|.++ .+++.+.+.++   .++++
T Consensus       193 ~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~~~---~~~g~  261 (373)
T 2fzw_A          193 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLIEM---TDGGV  261 (373)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHHHH---hCCCC
Confidence            9999996 9999999998888999 8999999988876543 33   43322   24432 12233333332   22479


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|.++|.
T Consensus       262 D~vid~~g~  270 (373)
T 2fzw_A          262 DYSFECIGN  270 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCc
Confidence            999999983

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.11  E-value=0.0013  Score=62.31  Aligned_cols=87  Identities=14%  Similarity=0.100  Sum_probs=52.9

Q ss_pred             CCC-CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHH
Q 035642            8 SNE-QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR--EQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~-~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~--~sv~~~~~~~~~~   84 (367)
                      ... .+|||+||+|++|...++.+...|++|+.++++.++.++..+.+++.|....+   |..+.  +++.+.+.++...
T Consensus       165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhc
Confidence            344 69999999999999999888889999999988766532222222223544322   22210  1222223222200


Q ss_pred             cCCCccEEEEcCC
Q 035642           85 FQGKLNLLVNNAA   97 (367)
Q Consensus        85 ~~g~iD~lI~~Ag   97 (367)
                      .++++|++|.++|
T Consensus       242 ~~~g~Dvvid~~G  254 (364)
T 1gu7_A          242 SGGEAKLALNCVG  254 (364)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence            1257999999998

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.10  E-value=0.004  Score=58.40  Aligned_cols=73  Identities=19%  Similarity=0.269  Sum_probs=53.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+|+ |++|...++.+...|++|+++++++++.+.+ +++   |....   .|..+.+..+.+.+    .. +++|+
T Consensus       169 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~~----~~-g~~d~  235 (340)
T 3s2e_A          169 WVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL---GAEVA---VNARDTDPAAWLQK----EI-GGAHG  235 (340)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT---TCSEE---EETTTSCHHHHHHH----HH-SSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EeCCCcCHHHHHHH----hC-CCCCE
Confidence            9999997 8999999999999999999999998887644 222   44432   35555443333332    23 68999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.++|
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            999987

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.07  E-value=0.0081  Score=56.23  Aligned_cols=114  Identities=11%  Similarity=0.043  Sum_probs=76.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++++++++++....++...    +..+.....|   .    +       .+
T Consensus         7 kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~-------a~   71 (326)
T 3pqe_A            7 KVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----E-------DC   71 (326)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----G-------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----H-------Hh
Confidence            8999996 9999999999999997  8999999998888766666542    1122332222   1    1       12


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                       ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.|+++|-...
T Consensus        72 -~~aDvVvi~ag~p~kp---G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           72 -KDADIVCICAGANQKP---GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD  126 (326)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             -CCCCEEEEecccCCCC---CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence             5689999999964221   1232   345677776666666666554   34578888776443

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.05  E-value=0.0027  Score=57.14  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=57.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcC--CcEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKG--LKVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~--~~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+...+  .++..+..+++
T Consensus        33 ~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~  111 (249)
T 1jw9_B           33 RVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD  111 (249)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             eEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence            8999996 7999999999999998 899999987                   78888888776543  34556555665


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      + +.+.+++        ...|+||.+..
T Consensus       112 ~-~~~~~~~--------~~~DvVi~~~d  130 (249)
T 1jw9_B          112 D-AELAALI--------AEHDLVLDCTD  130 (249)
T ss_dssp             H-HHHHHHH--------HTSSEEEECCS
T ss_pred             H-hHHHHHH--------hCCCEEEEeCC
Confidence            3 3444443        35799998865

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.01  E-value=0.00093  Score=59.26  Aligned_cols=75  Identities=11%  Similarity=-0.005  Sum_probs=56.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +..++.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.     .  .+.++.+|.++++.+.++-      . 
T Consensus         6 ~~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-   69 (234)
T 2aef_A            6 VAKSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-   69 (234)
T ss_dssp             ----CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-
T ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-
Confidence            445568999998 8999999999999999 999999988765443     1  3667889999998766541      1 


Q ss_pred             CCccEEEEcCC
Q 035642           87 GKLNLLVNNAA   97 (367)
Q Consensus        87 g~iD~lI~~Ag   97 (367)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (234)
T 2aef_A           70 RGARAVIVDLE   80 (234)
T ss_dssp             TTCSEEEECCS
T ss_pred             chhcEEEEcCC
Confidence            46789888765

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.01  E-value=0.0024  Score=60.65  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=52.4

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      .+ +|||+||+|++|...++.+.. .|++|+++++++++.+.+. ++   |....   .|-.+  ++   .+++.+..++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l---Gad~v---i~~~~--~~---~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL---GAHHV---IDHSK--PL---AAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT---TCSEE---ECTTS--CH---HHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCC--CH---HHHHHHhcCC
Confidence            35 999999999999998876665 6899999999988776543 22   44432   24433  22   2333333325


Q ss_pred             CccEEEEcCC
Q 035642           88 KLNLLVNNAA   97 (367)
Q Consensus        88 ~iD~lI~~Ag   97 (367)
                      ++|+++.++|
T Consensus       239 g~Dvvid~~g  248 (363)
T 4dvj_A          239 APAFVFSTTH  248 (363)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.97  E-value=0.0043  Score=58.95  Aligned_cols=76  Identities=14%  Similarity=0.179  Sum_probs=51.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|||+|+ |+||...++.+...|+ +|+.+++++++.+.+. ++   |....   .|..+ .+++.+.+.++   .++++
T Consensus       194 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~~~i~~~---t~gg~  262 (373)
T 1p0f_A          194 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GATEC---LNPKDYDKPIYEVICEK---TNGGV  262 (373)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCcEE---EecccccchHHHHHHHH---hCCCC
Confidence            9999996 9999999988888899 8999999988876543 33   44322   24332 12233333332   22579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|.++|.
T Consensus       263 Dvvid~~g~  271 (373)
T 1p0f_A          263 DYAVECAGR  271 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.97  E-value=0.005  Score=57.66  Aligned_cols=116  Identities=12%  Similarity=0.036  Sum_probs=68.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ..+ +|.|+|+ |++|.+++..|+..|.  .|+++++++++++....++....   ..+.... |  +.           
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-----------   71 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-----------   71 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-----------
Confidence            344 8999996 9999999999999987  89999999988887777776421   1222222 1  11           


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      +.+ ...|++|.+||.....      -+.-.+.++.|..-...+.+.+.++   ...+.++++|-..
T Consensus        72 ~a~-~~aDiVvi~ag~~~kp------G~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtNPv  128 (326)
T 3vku_A           72 SDA-KDADLVVITAGAPQKP------GETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV  128 (326)
T ss_dssp             GGG-TTCSEEEECCCCC----------------------CHHHHHHHHHTT---TCCSEEEECSSSH
T ss_pred             HHh-cCCCEEEECCCCCCCC------CchHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccCch
Confidence            112 5689999999964221      1122345566665555555555443   3457788877544

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.0025  Score=60.37  Aligned_cols=75  Identities=17%  Similarity=0.172  Sum_probs=53.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|| |++|...++.+... |++|+.+++++++.+.+. ++   |....   .|..+.  +.+.+.++..  +.++|
T Consensus       189 ~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~--~~~~v~~~~~--g~g~D  256 (359)
T 1h2b_A          189 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GADHV---VDARRD--PVKQVMELTR--GRGVN  256 (359)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCSEE---EETTSC--HHHHHHHHTT--TCCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCCEE---Eeccch--HHHHHHHHhC--CCCCc
Confidence            9999999 89999999888888 999999999988766543 33   44332   255543  3333333321  12699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.88  E-value=0.0021  Score=59.69  Aligned_cols=90  Identities=13%  Similarity=0.060  Sum_probs=56.7

Q ss_pred             eEEEEcCCC-----------------h-hHHHHHHHHHHCCCEEEEEeCChhH--------HHHHHHHHHh---cCCcEE
Q 035642           12 NYFITGGTR-----------------G-IGHAIVEELAGFGAIIHTCSRNQTE--------LNERLQEWKL---KGLKVT   62 (367)
Q Consensus        12 ~vLVTGas~-----------------G-IG~aia~~L~~~G~~Vi~~~R~~~~--------~~~~~~~l~~---~~~~~~   62 (367)
                      +||||+|..                 | .|.++|+.++++||.|+++.+...-        .....+.+..   .+....
T Consensus        39 ~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~  118 (313)
T 1p9o_A           39 VVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLL  118 (313)
T ss_dssp             EEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEE
T ss_pred             EEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccc
Confidence            399987654                 5 9999999999999999998875321        0001111110   112234


Q ss_pred             EEEccCCCHHHHHHHHHHH------------------------------HHHcCCCccEEEEcCCCCCCC
Q 035642           63 GSVCDLSSREQREKLMETV------------------------------SSIFQGKLNLLVNNAAVAVPK  102 (367)
Q Consensus        63 ~~~~Dlsd~~sv~~~~~~~------------------------------~~~~~g~iD~lI~~Ag~~~~~  102 (367)
                      .+.+|+.+.+++.+++.+.                              .+.+ ++.|++|++|++....
T Consensus       119 ~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          119 SLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEE
T ss_pred             eeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhcc
Confidence            4555666665555555433                              2345 6799999999997554

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.84  E-value=0.0037  Score=59.50  Aligned_cols=75  Identities=12%  Similarity=0.166  Sum_probs=52.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|++|...++.+...|++|+.+. ++++.+ .++++   |....   .|..+.+-.    +++.+..++++|+
T Consensus       167 ~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l---Ga~~v---i~~~~~~~~----~~v~~~t~g~~d~  234 (371)
T 3gqv_A          167 YVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR---GAEEV---FDYRAPNLA----QTIRTYTKNNLRY  234 (371)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT---TCSEE---EETTSTTHH----HHHHHHTTTCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc---CCcEE---EECCCchHH----HHHHHHccCCccE
Confidence            999999999999999999999999999886 566654 33333   44332   255554322    2233323356999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ++.++|.
T Consensus       235 v~d~~g~  241 (371)
T 3gqv_A          235 ALDCITN  241 (371)
T ss_dssp             EEESSCS
T ss_pred             EEECCCc
Confidence            9999983

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.83  E-value=0.0027  Score=61.33  Aligned_cols=71  Identities=13%  Similarity=0.273  Sum_probs=53.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.+ +++|.|+ |+||+.+++.|...|+ +|++++|+.++++++.+.+   +..  .  .+.   +++.+.+        
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l--------  225 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL--------  225 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH--------
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh--------
Confidence            456 9999998 9999999999999999 9999999998887776665   322  1  222   2333333        


Q ss_pred             CCccEEEEcCCC
Q 035642           87 GKLNLLVNNAAV   98 (367)
Q Consensus        87 g~iD~lI~~Ag~   98 (367)
                      ...|++|++.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            357999999864

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.82  E-value=0.007  Score=58.35  Aligned_cols=41  Identities=15%  Similarity=0.212  Sum_probs=36.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      +.+ +|+|+|+ |.||+.+++.+...|++|++++++.++++.+
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            345 9999997 8999999999999999999999999887665

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.82  E-value=0.0053  Score=58.49  Aligned_cols=76  Identities=14%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|||+|+ |+||...++.+...|+ +|+++++++++++.+ +++   |....   .|..+ .+++.+.+.++   .++++
T Consensus       196 ~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~~~~~~i~~~---~~gg~  264 (378)
T 3uko_A          196 NVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF---GVNEF---VNPKDHDKPIQEVIVDL---TDGGV  264 (378)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT---TCCEE---ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCcEE---EccccCchhHHHHHHHh---cCCCC
Confidence            9999998 9999999998888999 899999999887643 332   44332   24432 12233333332   22579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++.++|.
T Consensus       265 D~vid~~g~  273 (378)
T 3uko_A          265 DYSFECIGN  273 (378)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.82  E-value=0.0021  Score=60.88  Aligned_cols=72  Identities=21%  Similarity=0.241  Sum_probs=51.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|+|+ |+||...++.+...|++|+++++++++.+.+.+++   |....   .|..+.+.+.+       .. +++|+
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~~-------~~-~g~D~  247 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADDY---VIGSDQAKMSE-------LA-DSLDY  247 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSCE---EETTCHHHHHH-------ST-TTEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCcee---eccccHHHHHH-------hc-CCCCE
Confidence            9999995 99999999988889999999999988766554333   43321   25555433222       22 57999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ++.++|.
T Consensus       248 vid~~g~  254 (357)
T 2cf5_A          248 VIDTVPV  254 (357)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.0049  Score=58.61  Aligned_cols=71  Identities=13%  Similarity=0.232  Sum_probs=52.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+|+ |++|..+++.+...|++|+++++++++.+.+. ++   |....   .|..+.+.+++    +   . +++|+
T Consensus       197 ~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~----~---~-~g~Dv  260 (369)
T 1uuf_A          197 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADEV---VNSRNADEMAA----H---L-KSFDF  260 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE---EETTCHHHHHT----T---T-TCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---eccccHHHHHH----h---h-cCCCE
Confidence            9999998 89999999988889999999999988876554 33   43322   36666543322    2   1 46999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|.++|.
T Consensus       261 vid~~g~  267 (369)
T 1uuf_A          261 ILNTVAA  267 (369)
T ss_dssp             EEECCSS
T ss_pred             EEECCCC
Confidence            9999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.78  E-value=0.019  Score=53.47  Aligned_cols=111  Identities=15%  Similarity=0.098  Sum_probs=72.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN--QTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~--~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++.|+|+ |.+|.+++..|+..|. .|++.+++  +++++....++...      ..++... .|   .           
T Consensus        10 kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~-----------   73 (315)
T 3tl2_A           10 KVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y-----------   73 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H-----------
Confidence            8999997 9999999999999999 99999999  55555444444321      2222221 12   1           


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      +.+ ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.++++|-.
T Consensus        74 ~a~-~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 ADT-ADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             GGG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             HHh-CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence            112 5689999999974322   2233   345677776666666666554   345788887754

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.76  E-value=0.0033  Score=59.07  Aligned_cols=73  Identities=15%  Similarity=0.229  Sum_probs=51.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|||+|| |++|...++.+...  |++|+.+++++++.+.+. ++   |....   .|..+.   .+.++++.+  +.++
T Consensus       173 ~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~--g~g~  239 (344)
T 2h6e_A          173 VVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD--GLGA  239 (344)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT--TCCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc--CCCc
Confidence            9999999 99999999988888  999999999988776543 33   43322   233220   122333332  1379


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |++|.++|
T Consensus       240 D~vid~~g  247 (344)
T 2h6e_A          240 SIAIDLVG  247 (344)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999998

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0073  Score=57.62  Aligned_cols=76  Identities=18%  Similarity=0.219  Sum_probs=53.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCC--CHHHHHHHHHHHHHHcCC-
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS--SREQREKLMETVSSIFQG-   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dls--d~~sv~~~~~~~~~~~~g-   87 (367)
                      +|||+| +|++|..+++.+...| ++|+++++++++.+.+. ++   |....   .|..  +.+++.+.+.++   .++ 
T Consensus       198 ~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~v~~~---~~g~  266 (380)
T 1vj0_A          198 TVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI---GADLT---LNRRETSVEERRKAIMDI---THGR  266 (380)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT---TCSEE---EETTTSCHHHHHHHHHHH---TTTS
T ss_pred             EEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc---CCcEE---EeccccCcchHHHHHHHH---hCCC
Confidence            999999 8999999999988999 59999999988776543 32   44322   2443  133433333332   223 


Q ss_pred             CccEEEEcCCC
Q 035642           88 KLNLLVNNAAV   98 (367)
Q Consensus        88 ~iD~lI~~Ag~   98 (367)
                      ++|++|.++|.
T Consensus       267 g~Dvvid~~g~  277 (380)
T 1vj0_A          267 GADFILEATGD  277 (380)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCcEEEECCCC
Confidence            69999999983

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.70  E-value=0.0063  Score=58.56  Aligned_cols=75  Identities=25%  Similarity=0.274  Sum_probs=52.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      +|||+|| |++|...++.+...|+ +|+++++++++.+.+ +++   |....   .|-.+.+..+++    .+..++ ++
T Consensus       216 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~i----~~~t~g~g~  283 (404)
T 3ip1_A          216 NVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKENFVEAV----LDYTNGLGA  283 (404)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSCHHHHH----HHHTTTCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCCHHHHH----HHHhCCCCC
Confidence            9999998 9999999998889999 899999998877644 333   44332   254443322222    222223 69


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++.++|.
T Consensus       284 D~vid~~g~  292 (404)
T 3ip1_A          284 KLFLEATGV  292 (404)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999983

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.68  E-value=0.033  Score=52.40  Aligned_cols=118  Identities=14%  Similarity=0.074  Sum_probs=72.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcC--CcEEEEEccCCCHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQT--ELNERLQEWKLKG--LKVTGSVCDLSSREQREK   76 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~~--~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~   76 (367)
                      ++. +|.||||+|+||++++-.|+....       .+.+.+.++.  +++...-++....  .....+..+  +.   .+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---RV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---HH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---HH
Confidence            455 899999999999999999987643       6889998753  4454555554421  122222221  22   12


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           77 LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      .       + ...|++|-+||.....   .++.+   +.++.|..=...+.+.+.++  ..+...|+.+|-
T Consensus        97 a-------~-~~advVvi~aG~prkp---GmtR~---DLl~~Na~I~~~~~~~i~~~--a~~~~~vlvvsN  151 (345)
T 4h7p_A           97 A-------F-DGVAIAIMCGAFPRKA---GMERK---DLLEMNARIFKEQGEAIAAV--AASDCRVVVVGN  151 (345)
T ss_dssp             H-------T-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH--SCTTCEEEECSS
T ss_pred             H-------h-CCCCEEEECCCCCCCC---CCCHH---HHHHHhHHHHHHHHHHHHhh--ccCceEEEEeCC
Confidence            2       2 5689999999975332   23443   45677766665565555443  123455666654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.68  E-value=0.00052  Score=64.21  Aligned_cols=74  Identities=15%  Similarity=0.148  Sum_probs=50.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|++|..+++.+...|++|+.+++++++.+.+. ++   |....+   |..+.+  .+.++++   .++++|+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v~---~~~~~~--~~~~~~~---~~~~~d~  220 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEVI---SREDVY--DGTLKAL---SKQQWQG  220 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEEE---EHHHHC--SSCCCSS---CCCCEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEEE---ECCCch--HHHHHHh---hcCCccE
Confidence            8999999999999999999899999999999987766543 33   433321   322111  0111111   1146999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|+++|
T Consensus       221 vid~~g  226 (330)
T 1tt7_A          221 AVDPVG  226 (330)
T ss_dssp             EEESCC
T ss_pred             EEECCc
Confidence            999998

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.66  E-value=0.0033  Score=54.62  Aligned_cols=43  Identities=26%  Similarity=0.417  Sum_probs=37.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      +++|+||+|.+|.++++.|++.|++|++++|+.++.+.+.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999988877665543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.64  E-value=0.00039  Score=63.75  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=36.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERL   51 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~   51 (367)
                      ++++ +++|+|+ ||+|++++..|++.|+ +|.+++|+.++++++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            3445 8999997 7999999999999999 8999999998765543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.63  E-value=0.0019  Score=60.18  Aligned_cols=72  Identities=13%  Similarity=0.125  Sum_probs=51.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .|||+||+|++|...++.+...|++|+.+++++++.+.+.+ +   |....+   |..+.+.    ++++   .++++|+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi---~~~~~~~----~~~~---~~~~~d~  214 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRIL---SRDEFAE----SRPL---EKQLWAG  214 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEE---EGGGSSC----CCSS---CCCCEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEE---ecCCHHH----HHhh---cCCCccE
Confidence            69999999999999999999999999999999888765543 3   444333   2222111    1111   1257999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.++|
T Consensus       215 v~d~~g  220 (324)
T 3nx4_A          215 AIDTVG  220 (324)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999887

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.63  E-value=0.0037  Score=58.17  Aligned_cols=70  Identities=13%  Similarity=0.210  Sum_probs=49.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|+||+|++|...++.+...|++|+.++++ ++. +.++++   |....   .|..+.+.+.+.       . .++|+
T Consensus       155 ~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~l---Ga~~~---i~~~~~~~~~~~-------~-~g~D~  218 (321)
T 3tqh_A          155 VVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKAL---GAEQC---INYHEEDFLLAI-------S-TPVDA  218 (321)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHHH---TCSEE---EETTTSCHHHHC-------C-SCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHHc---CCCEE---EeCCCcchhhhh-------c-cCCCE
Confidence            99999999999999999999999999988854 333 334444   44432   255544322221       1 46999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.++|
T Consensus       219 v~d~~g  224 (321)
T 3tqh_A          219 VIDLVG  224 (321)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.60  E-value=0.0031  Score=59.69  Aligned_cols=71  Identities=20%  Similarity=0.135  Sum_probs=51.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR-EQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~-~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|| |++|..+++.+...|++|+++++++++.+.+.+ +   |....   .|..+. +.    .+++.    +++|
T Consensus       182 ~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---~~~~~~~~~----~~~~~----~~~D  245 (360)
T 1piw_A          182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY---IATLEEGDW----GEKYF----DTFD  245 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EEGGGTSCH----HHHSC----SCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE---EcCcCchHH----HHHhh----cCCC
Confidence            9999999 999999999888899999999999888765543 3   43332   243332 21    22221    4699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|.++|.
T Consensus       246 ~vid~~g~  253 (360)
T 1piw_A          246 LIVVCASS  253 (360)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999985

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.60  E-value=0.0091  Score=54.91  Aligned_cols=85  Identities=13%  Similarity=0.174  Sum_probs=62.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh------------------hHHHHHHHHHHhcC--CcEEEEEccCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ------------------TELNERLQEWKLKG--LKVTGSVCDLSS   70 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~------------------~~~~~~~~~l~~~~--~~~~~~~~Dlsd   70 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .|.+.+++.+...+  .++..+..++++
T Consensus        38 ~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            8999987 8999999999999997 899998875                  66777777776543  456666678888


Q ss_pred             HHHHHHHHHHHHHHc---CCCccEEEEcCC
Q 035642           71 REQREKLMETVSSIF---QGKLNLLVNNAA   97 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~---~g~iD~lI~~Ag   97 (367)
                      .+.++.+++.+....   ....|+||.+..
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            777777775442210   025799987654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.59  E-value=0.031  Score=52.18  Aligned_cols=113  Identities=11%  Similarity=0.062  Sum_probs=72.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.|+|| |.+|.+++..|+..|. .|++.++++++++....++...      ..++.. ..|   .    +.       
T Consensus         9 kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a-------   72 (324)
T 3gvi_A            9 KIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AA-------   72 (324)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GG-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HH-------
Confidence            7999998 9999999999999998 9999999998876555444431      223322 112   1    11       


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      + ..-|++|.+||......   .+   -.+.+..|..-...+.+.+..+   ...+.|+++|-...
T Consensus        73 ~-~~aDiVIiaag~p~k~G---~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd  128 (324)
T 3gvi_A           73 I-EGADVVIVTAGVPRKPG---MS---RDDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD  128 (324)
T ss_dssp             G-TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             H-CCCCEEEEccCcCCCCC---CC---HHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence            2 46899999999643211   11   2235566766666666666554   34578888776443

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.58  E-value=0.0033  Score=60.02  Aligned_cols=77  Identities=10%  Similarity=0.089  Sum_probs=53.8

Q ss_pred             eEEEEc-CCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITG-GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTG-as~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||.| |+|++|...++.+...|++|+.+++++++.+.+.+ +   |....   .|-.+.+-.+++. ++...  ..+|
T Consensus       173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~v~-~~t~~--~g~d  242 (379)
T 3iup_A          173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q---GAVHV---CNAASPTFMQDLT-EALVS--TGAT  242 (379)
T ss_dssp             SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T---TCSCE---EETTSTTHHHHHH-HHHHH--HCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C---CCcEE---EeCCChHHHHHHH-HHhcC--CCce
Confidence            899997 99999999999888899999999999887765532 2   43322   2444443333333 22221  2599


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +++.++|.
T Consensus       243 ~v~d~~g~  250 (379)
T 3iup_A          243 IAFDATGG  250 (379)
T ss_dssp             EEEESCEE
T ss_pred             EEEECCCc
Confidence            99999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.58  E-value=0.0049  Score=58.65  Aligned_cols=77  Identities=23%  Similarity=0.262  Sum_probs=52.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|| |++|...++.+...|+ +|+++++++++.+. ++++   |....   .|.++.+..+.+ .+.....++++|
T Consensus       185 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~~v---i~~~~~~~~~~i-~~~~~~~~gg~D  255 (370)
T 4ej6_A          185 TVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV---GATAT---VDPSAGDVVEAI-AGPVGLVPGGVD  255 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH---TCSEE---ECTTSSCHHHHH-HSTTSSSTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCCEE---ECCCCcCHHHHH-HhhhhccCCCCC
Confidence            9999998 9999999998889999 89999999887653 3344   44332   355554322222 211002225799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.++|
T Consensus       256 vvid~~G  262 (370)
T 4ej6_A          256 VVIECAG  262 (370)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999988

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.56  E-value=0.025  Score=52.99  Aligned_cols=115  Identities=9%  Similarity=0.018  Sum_probs=78.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|+|| |++|.+++..|+..|.  .|++.++++++++....++....   .....+..  .|.+   +        + 
T Consensus        21 kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---~--------~-   85 (331)
T 4aj2_A           21 KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---V--------T-   85 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---G--------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH---H--------h-
Confidence            8999998 9999999999999997  89999999988888777776421   11122222  1221   1        2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ...|++|.+||.....   .++.   .+.++.|..-...+.+.+.++   ...+.++++|-...
T Consensus        86 ~~aDiVvi~aG~~~kp---G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           86 ANSKLVIITAGARQQE---GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             TTEEEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             CCCCEEEEccCCCCCC---CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence            5689999999975321   1222   246677776666666666654   34578888876543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.45  E-value=0.05  Score=50.67  Aligned_cols=114  Identities=11%  Similarity=0.068  Sum_probs=74.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|+|+ |.+|.+++..|+..|. .|++.++++++++....++...    +....+...+  +.    +.       + 
T Consensus         7 kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a-------~-   71 (321)
T 3p7m_A            7 KITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KD-------L-   71 (321)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GG-------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HH-------H-
Confidence            7888995 9999999999999998 9999999998877666666532    1112221111  21    11       2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+..+   ...+.++++|-..
T Consensus        72 ~~aDvVIi~ag~p~k~---G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  125 (321)
T 3p7m_A           72 ENSDVVIVTAGVPRKP---GMSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNPL  125 (321)
T ss_dssp             TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             CCCCEEEEcCCcCCCC---CCCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            4689999999964322   1233   245666776666676666654   3457888876543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.43  E-value=0.036  Score=51.78  Aligned_cols=75  Identities=17%  Similarity=0.229  Sum_probs=50.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|+|| |++|...++.+...|+. |+.+++++++.+.+ +++   |....+   |.++.+ ..+..+++.+.  +..|
T Consensus       163 ~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l---Ga~~~i---~~~~~~-~~~~~~~~~~~--~g~d  231 (346)
T 4a2c_A          163 NVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF---GAMQTF---NSSEMS-APQMQSVLREL--RFNQ  231 (346)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSEEE---ETTTSC-HHHHHHHHGGG--CSSE
T ss_pred             EEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc---CCeEEE---eCCCCC-HHHHHHhhccc--CCcc
Confidence            9999987 89999999999999986 56788888776543 333   544332   444332 23333333332  5689


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.++|
T Consensus       232 ~v~d~~G  238 (346)
T 4a2c_A          232 LILETAG  238 (346)
T ss_dssp             EEEECSC
T ss_pred             ccccccc
Confidence            9999988

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.42  E-value=0.0099  Score=56.38  Aligned_cols=74  Identities=15%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++   |....   .|..+.+-.+    ++.+..++++|
T Consensus       193 ~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~~~----~~~~~~~gg~D  260 (371)
T 1f8f_A          193 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQDPVA----AIKEITDGGVN  260 (371)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSCHHH----HHHHHTTSCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccCHHH----HHHHhcCCCCc
Confidence            9999995 9999999988888899 699999998877654 333   43332   2444332222    22222224799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.++|
T Consensus       261 ~vid~~g  267 (371)
T 1f8f_A          261 FALESTG  267 (371)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.40  E-value=0.0045  Score=58.25  Aligned_cols=66  Identities=20%  Similarity=0.320  Sum_probs=49.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+|+ |+||...++.+...|++|+++++++++.+.+. ++   |....+     ++.+.+.           .++|+
T Consensus       179 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v~-----~~~~~~~-----------~~~D~  237 (348)
T 3two_A          179 KVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM---GVKHFY-----TDPKQCK-----------EELDF  237 (348)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT---TCSEEE-----SSGGGCC-----------SCEEE
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc---CCCeec-----CCHHHHh-----------cCCCE
Confidence            9999997 99999999999899999999999988876543 23   544433     3333211           26999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ++.++|.
T Consensus       238 vid~~g~  244 (348)
T 3two_A          238 IISTIPT  244 (348)
T ss_dssp             EEECCCS
T ss_pred             EEECCCc
Confidence            9999984

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.39  E-value=0.071  Score=49.82  Aligned_cols=116  Identities=10%  Similarity=0.015  Sum_probs=69.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|.|.|| |.+|.+++..|+..|+ +|++.++++++++.....+...      ..++.+.    +|.   ++.+      
T Consensus        11 kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~------   76 (331)
T 1pzg_A           11 KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAAL------   76 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHH------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHh------
Confidence            8999998 9999999999999998 9999999998777644443321      1223221    222   2222      


Q ss_pred             cCCCccEEEEcCCCCCCCCccC--CCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALD--TTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~--~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                        ...|++|.++|.........  .+.   ...+..|..-...+.+.+.++   ...+.++++|-..
T Consensus        77 --~~aDiVi~a~g~p~~~g~~~~~~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~vi~~tNP~  135 (331)
T 1pzg_A           77 --TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTNPL  135 (331)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             --CCCCEEEEccCCCCCCCcccCCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEEcCch
Confidence              45799999998643221100  011   123445555555555555544   2346666654433

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.37  E-value=0.021  Score=51.98  Aligned_cols=166  Identities=12%  Similarity=0.148  Sum_probs=94.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHH-CCCEEE-EEeCChhHH--HH-----------------HHHHHHhcCCcEEEEEc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAG-FGAIIH-TCSRNQTEL--NE-----------------RLQEWKLKGLKVTGSVC   66 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~-~G~~Vi-~~~R~~~~~--~~-----------------~~~~l~~~~~~~~~~~~   66 (367)
                      +++ +|.|+|++|.+|+.+++.+.+ .|+.|+ +++++.+..  ..                 +.+.+.  +.++   .+
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~Dv---VI   77 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDV---FI   77 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSE---EE
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCCE---EE
Confidence            344 899999999999999999874 577776 556654320  00                 001111  2222   34


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhH----------HHh----hHHHHHHHHHHHH
Q 035642           67 DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR----------STN----FESVFHLSKLAHP  132 (367)
Q Consensus        67 Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~----------~vN----v~g~~~l~~~~~~  132 (367)
                      |++.++...+.+..+.+.   ++++++-+.|..         .+..+.+.          .+|    +.-.+.+++.+.+
T Consensus        78 Dft~p~~~~~~~~~a~~~---G~~vVigTtG~~---------~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~  145 (273)
T 1dih_A           78 DFTRPEGTLNHLAFCRQH---GKGMVIGTTGFD---------EAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAK  145 (273)
T ss_dssp             ECSCHHHHHHHHHHHHHT---TCEEEECCCCCC---------HHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHH
T ss_pred             EcCChHHHHHHHHHHHhC---CCCEEEECCCCC---------HHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHH
Confidence            999999998888887764   578888777632         22222221          112    1123344455555


Q ss_pred             HHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHHHHHh---------------CCCCeEEEEEecCcccCC
Q 035642          133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQ---------------AKDNIRANSIAPGVIRTS  196 (367)
Q Consensus       133 ~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~---------------~~~gIrvn~I~PG~v~t~  196 (367)
                      ++..  .-.|=.+   ..+....--..|+.++...+.+.+.+...+               .+.+|.+.++.-|-+.+.
T Consensus       146 ~~~~--~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          146 VMGD--YTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             HHTT--TSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             hcCC--CCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            5521  1122211   112222333568999988888876654321               134789999986655443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.35  E-value=0.019  Score=54.84  Aligned_cols=42  Identities=10%  Similarity=0.100  Sum_probs=36.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL   51 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~   51 (367)
                      +.+ +|+|+|+ |++|+.+++.+...|++|++++|+.++++.+.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            345 9999996 89999999999999999999999988776553

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.35  E-value=0.01  Score=56.78  Aligned_cols=77  Identities=16%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   |..  .  +|.++.+.+.+.+.++..  +.++|
T Consensus       188 ~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~--~--i~~~~~~~~~~~v~~~t~--g~g~D  256 (398)
T 1kol_A          188 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---GFE--I--ADLSLDTPLHEQIAALLG--EPEVD  256 (398)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCE--E--EETTSSSCHHHHHHHHHS--SSCEE
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---CCc--E--EccCCcchHHHHHHHHhC--CCCCC
Confidence            9999995 9999999988888999 799999998877654 333   543  2  355443323322322221  12699


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      ++|.++|..
T Consensus       257 vvid~~G~~  265 (398)
T 1kol_A          257 CAVDAVGFE  265 (398)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECCCCc
Confidence            999999853

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.34  E-value=0.036  Score=52.77  Aligned_cols=40  Identities=10%  Similarity=0.035  Sum_probs=36.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      +|+|.|+ |.+|..+++.+...|++|++++|+.++++.+.+
T Consensus       186 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          186 SALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            8999999 899999999999999999999999988776644

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.31  E-value=0.026  Score=52.51  Aligned_cols=112  Identities=11%  Similarity=0.005  Sum_probs=69.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|..++..|+..|.  .|++.+.++++++....++....   ..+.+. .  .+.    +       .+ 
T Consensus         9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~----~-------a~-   72 (318)
T 1y6j_A            9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY----S-------DV-   72 (318)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----G-------GG-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH----H-------Hh-
Confidence            7999998 9999999999999997  89999999877766555654321   122111 1  111    1       12 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ...|++|.++|.....   ..+.   .+.+..|+.-...+.+.+.++   ...+.|+++|-.
T Consensus        73 ~~aDvVii~~g~p~k~---g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  125 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKP---GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNP  125 (318)
T ss_dssp             TTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSS
T ss_pred             CCCCEEEEcCCCCCCC---CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCc
Confidence            5689999999974321   1122   245677777777777777665   345777776543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.30  E-value=0.002  Score=60.90  Aligned_cols=80  Identities=15%  Similarity=0.206  Sum_probs=47.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|++|...++.+...|++|+.++++.++.++..+.+++.|....+   |-.+. .... +.++.... +++|+
T Consensus       170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~-~~~~~~~~-~~~Dv  243 (357)
T 1zsy_A          170 SVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEEL-RRPE-MKNFFKDM-PQPRL  243 (357)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHHH-HSGG-GGGTTSSS-CCCSE
T ss_pred             EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCcc-hHHH-HHHHHhCC-CCceE
Confidence            9999999999999999888888999888776644322222223333544322   21111 0111 11111111 25899


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|.++|
T Consensus       244 vid~~g  249 (357)
T 1zsy_A          244 ALNCVG  249 (357)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999988

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.28  E-value=0.0056  Score=57.81  Aligned_cols=72  Identities=13%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             CeEEEEcCCChhHHHH-HHHH-HHCCCE-EEEEeCChh---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAI-VEEL-AGFGAI-IHTCSRNQT---ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~ai-a~~L-~~~G~~-Vi~~~R~~~---~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+|||+|| |++|... ++.+ ...|++ |+.++++++   +.+.+ +++   |..  .+  |..+.+ +.+ +.++   
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---Ga~--~v--~~~~~~-~~~-i~~~---  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---DAT--YV--DSRQTP-VED-VPDV---  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---TCE--EE--ETTTSC-GGG-HHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---CCc--cc--CCCccC-HHH-HHHh---
Confidence            49999999 9999999 7766 678997 999999887   66544 333   432  22  544432 223 3333   


Q ss_pred             cCCCccEEEEcCC
Q 035642           85 FQGKLNLLVNNAA   97 (367)
Q Consensus        85 ~~g~iD~lI~~Ag   97 (367)
                      . +++|++|.++|
T Consensus       240 ~-gg~Dvvid~~g  251 (357)
T 2b5w_A          240 Y-EQMDFIYEATG  251 (357)
T ss_dssp             S-CCEEEEEECSC
T ss_pred             C-CCCCEEEECCC
Confidence            2 57999999998

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.26  E-value=0.056  Score=50.20  Aligned_cols=113  Identities=13%  Similarity=0.085  Sum_probs=71.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|+|| |.+|.+++..|+..|.  .|++.++++++++....++...    +..+.+.. |  +.+    .       +
T Consensus         8 KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~----a-------~   72 (317)
T 3d0o_A            8 KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS----D-------C   72 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG----G-------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH----H-------h
Confidence            7999999 9999999999998884  8999999988776544444321    12222222 2  211    1       2


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                       ...|++|.++|.....   ..+.+   ..+..|..-...+.+.+.++   ...+.|+++|-..
T Consensus        73 -~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (317)
T 3d0o_A           73 -HDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV  126 (317)
T ss_dssp             -TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             -CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence             5689999999974322   12322   34566665555555555554   3457777765433

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.22  E-value=0.0097  Score=56.00  Aligned_cols=75  Identities=15%  Similarity=0.155  Sum_probs=51.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      +|||+|+ |+||...++.+...|+ +|+.+++++++.+.+ +++   |....   .|..+.+..++    +.+..++ ++
T Consensus       169 ~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~----v~~~t~g~g~  236 (352)
T 3fpc_A          169 TVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATDI---INYKNGDIVEQ----ILKATDGKGV  236 (352)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCEE---ECGGGSCHHHH----HHHHTTTCCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCceE---EcCCCcCHHHH----HHHHcCCCCC
Confidence            9999985 9999999998888999 799999998776543 333   44322   24433332222    2222223 69


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++.++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.22  E-value=0.064  Score=48.81  Aligned_cols=42  Identities=19%  Similarity=0.192  Sum_probs=36.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      ++|.|.|+ |.+|..+|..|++.|++|++.+|++++++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            36777776 8899999999999999999999999887766654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.18  E-value=0.076  Score=49.56  Aligned_cols=114  Identities=11%  Similarity=0.033  Sum_probs=74.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|.+++..|+..+.  .|++.++++++++....++....   ..+.+.. |  +.++           + 
T Consensus        11 KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------~-   74 (326)
T 2zqz_A           11 KVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------A-   74 (326)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------h-
Confidence            8999999 9999999999998886  89999999988887666665421   2222222 2  2111           2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ...|++|..+|.....   ..+.+   +.+..|..-...+.+.+..+   ...+.|+++|-...
T Consensus        75 ~~aDvVii~ag~~~k~---g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           75 KDADLVVITAGAPQKP---GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             GGCSEEEECCCCC--------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred             CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence            4689999999974321   12322   34566666666666666554   34688888765443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.16  E-value=0.058  Score=50.05  Aligned_cols=115  Identities=15%  Similarity=0.047  Sum_probs=73.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-C--CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEc-cCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-G--AIIHTCSRNQTELNERLQEWKLKGLKVTGSVC-DLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~-Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +|.|+||+|.+|.+++..|+.+ +  ..++++++++ +.+....++............ .-.+.    +.+        .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~----~~~--------~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDAT----PAL--------E   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCH----HHH--------T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcH----HHh--------C
Confidence            5889999999999999999875 5  4799999987 444445555543322222211 10111    112        5


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ..|++|.+||.....   .++.   .+.++.|..-...+.+.+.++   ...+.|+++|-.
T Consensus        69 ~aDivii~ag~~rkp---G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           69 GADVVLISAGVARKP---GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             TCSEEEECCSCSCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            689999999974321   2233   456777877777777777665   345778887653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.16  E-value=0.076  Score=49.34  Aligned_cols=114  Identities=11%  Similarity=0.042  Sum_probs=71.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|.+++..|+..|.  .|++.++++++++....++....   ..+.+.. |  +.+           .+ 
T Consensus         7 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------a~-   70 (318)
T 1ez4_A            7 KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------DC-   70 (318)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------GG-
T ss_pred             EEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------Hh-
Confidence            8999999 9999999999998886  89999999988887666665421   2222222 2  111           12 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                      ...|++|..+|.....   ..+   -.+.+..|..-...+.+.+..+   ...+.|+++|-...
T Consensus        71 ~~aDvVii~ag~~~~~---g~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP---GES---RLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPVD  125 (318)
T ss_dssp             TTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcHH
Confidence            5689999999974321   111   1234556665555555555443   34678888765443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.033  Score=53.52  Aligned_cols=40  Identities=13%  Similarity=0.246  Sum_probs=36.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      +|+|.|+ |.+|..+++.+...|++|++++++.++++.+.+
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            8999999 899999999999999999999999988766543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.13  E-value=0.015  Score=55.66  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=51.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-Cc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-KL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-~i   89 (367)
                      +|||+|+ |++|...++.+...|+ +|+++++++++.+.+. +   .|.  ..  +|..+.+.+.+.+.++.   ++ ++
T Consensus       188 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa--~~--i~~~~~~~~~~~~~~~~---~g~g~  255 (398)
T 2dph_A          188 HVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D---AGF--ET--IDLRNSAPLRDQIDQIL---GKPEV  255 (398)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T---TTC--EE--EETTSSSCHHHHHHHHH---SSSCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---cCC--cE--EcCCCcchHHHHHHHHh---CCCCC
Confidence            9999997 9999999988888899 9999999988765432 2   244  22  35544322122222222   13 69


Q ss_pred             cEEEEcCCCC
Q 035642           90 NLLVNNAAVA   99 (367)
Q Consensus        90 D~lI~~Ag~~   99 (367)
                      |++|.++|..
T Consensus       256 Dvvid~~g~~  265 (398)
T 2dph_A          256 DCGVDAVGFE  265 (398)
T ss_dssp             EEEEECSCTT
T ss_pred             CEEEECCCCc
Confidence            9999999853

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.12  E-value=0.0052  Score=56.30  Aligned_cols=46  Identities=22%  Similarity=0.180  Sum_probs=39.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQE   53 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~   53 (367)
                      +++.+ +++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~  165 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence            34556 9999997 7999999999999998 899999999887776543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.11  E-value=0.017  Score=54.09  Aligned_cols=75  Identities=12%  Similarity=0.151  Sum_probs=50.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|+ |++|...++.+... |++|+.+++++++.+.+. ++   |....+   |-.+ +..++ +.++...  .++|
T Consensus       174 ~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l---Ga~~~i---~~~~-~~~~~-v~~~t~g--~g~d  241 (345)
T 3jv7_A          174 TAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV---GADAAV---KSGA-GAADA-IRELTGG--QGAT  241 (345)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT---TCSEEE---ECST-THHHH-HHHHHGG--GCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc---CCCEEE---cCCC-cHHHH-HHHHhCC--CCCe
Confidence            9999998 99999988877666 789999999988776543 22   444322   3332 22222 2222221  2699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +++.++|.
T Consensus       242 ~v~d~~G~  249 (345)
T 3jv7_A          242 AVFDFVGA  249 (345)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.09  E-value=0.036  Score=50.97  Aligned_cols=114  Identities=11%  Similarity=-0.039  Sum_probs=70.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|+|| |.+|.+++..|+..|.  .|++.++++++++....++...    .....+...  +|.    +.+       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~-------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLL-------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGG-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HHh-------
Confidence            5889999 9999999999999998  8999999998876433333321    112222211  121    112       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                       ..-|++|.+||.....   ..+..   +.+..|..-...+.+.+.++   ...+.|+++|-..
T Consensus        68 -~~aDiVViaag~~~kp---G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~iivvsNPv  121 (294)
T 1oju_A           68 -KGSEIIVVTAGLARKP---GMTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTNPM  121 (294)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSSSH
T ss_pred             -CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcc
Confidence             4579999999975322   22333   34566655544555544433   3457788877543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.04  E-value=0.0048  Score=55.63  Aligned_cols=40  Identities=18%  Similarity=0.209  Sum_probs=35.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~   52 (367)
                      +++|.|+ ||.|++++..|++.|+ +|.+++|+.++++++.+
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~  150 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF  150 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            7999997 8999999999999998 89999999987765543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.03  E-value=0.027  Score=50.52  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=54.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcC--CcEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKG--LKVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~--~~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+++.+++.+...+  .++..+..+++
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~  108 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLT  108 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            8999998 7899999999999998 788886642                   56777777776543  34555554554


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      + +.+.+++        ...|+||++..
T Consensus       109 ~-~~~~~~~--------~~~DvVi~~~d  127 (251)
T 1zud_1          109 G-EALKDAV--------ARADVVLDCTD  127 (251)
T ss_dssp             H-HHHHHHH--------HHCSEEEECCS
T ss_pred             H-HHHHHHH--------hcCCEEEECCC
Confidence            3 4444444        24699998754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.00  E-value=0.011  Score=53.80  Aligned_cols=42  Identities=26%  Similarity=0.276  Sum_probs=38.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++|.|+ ||.|++++..|++.|.+|.++.|+.++++++. ++
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            48999997 99999999999999999999999999998887 55

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.98  E-value=0.083  Score=48.70  Aligned_cols=112  Identities=10%  Similarity=0.045  Sum_probs=67.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|..++..|+..|.  .|++.++++++++....++....   ....+..   .+.+    .       + 
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~----a-------~-   65 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS----E-------L-   65 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG----G-------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH----H-------h-
Confidence            5889998 9999999999999998  99999999887766555553221   1111111   1211    1       2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ...|++|.++|.....      ...-.+.+..|+.-...+.+.+.++   ...+.|+++|-.
T Consensus        66 ~~aDvVIi~~~~~~~~------g~~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP  118 (304)
T 2v6b_A           66 ADAQVVILTAGANQKP------GESRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNP  118 (304)
T ss_dssp             TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred             CCCCEEEEcCCCCCCC------CCcHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            5689999999864321      1112245566766666666666665   245667765543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.90  E-value=0.077  Score=49.24  Aligned_cols=114  Identities=11%  Similarity=0.062  Sum_probs=69.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|+|+ |.+|.+++..|+..|.  .|++.++++++++....++...    +........|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            5889997 9999999999999887  8999999998877655555431    1122222112  111           12


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                       ...|++|.+||.....   .   ..-.+.+..|..-...+.+.+..+   ...+.|+++|-..
T Consensus        68 -~~aDvVii~ag~~~kp---G---~~R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  121 (314)
T 3nep_X           68 -EDSDVCIITAGLPRSP---G---MSRDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVANPL  121 (314)
T ss_dssp             -TTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCSSH
T ss_pred             -CCCCEEEECCCCCCCC---C---CCHHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCCch
Confidence             5689999999974321   1   112345566665555555555433   3457788777543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.90  E-value=0.017  Score=55.84  Aligned_cols=72  Identities=15%  Similarity=0.110  Sum_probs=56.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .|+|.|. |-+|+.+++.|.+.|+.|++++++++..+.+.+    .+  +.++.+|.++++.+.++-      . .+.|+
T Consensus         6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~ag------i-~~A~~   71 (413)
T 3l9w_A            6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESAG------A-AKAEV   71 (413)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHTT------T-TTCSE
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhcC------C-CccCE
Confidence            6999997 889999999999999999999999987765542    23  446778999988766551      1 45788


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ||.+.+
T Consensus        72 viv~~~   77 (413)
T 3l9w_A           72 LINAID   77 (413)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            887765

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.89  E-value=0.12  Score=48.17  Aligned_cols=121  Identities=16%  Similarity=0.137  Sum_probs=68.4

Q ss_pred             CCCCCCC--CCCeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHH
Q 035642            2 YSYVWWS--NEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSRE   72 (367)
Q Consensus         2 ~~~~~~~--~~~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~   72 (367)
                      |+|..+.  +..+|.|+|| |.+|.++|..|+..|. +|++.++++++++.....+...      ..++... .|.   +
T Consensus         4 ~~~~~~~~~~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~   78 (328)
T 2hjr_A            4 ISYKYNTVIMRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---E   78 (328)
T ss_dssp             ---------CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G
T ss_pred             cchhhcccCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---H
Confidence            3454443  2238999998 9999999999999998 9999999998877544333221      2233321 221   1


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                          .+        ...|++|.++|.......   +..   +.+..|..-...+.+.+.++   ...+.++++|-.
T Consensus        79 ----al--------~~aD~VI~avg~p~k~g~---tr~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  133 (328)
T 2hjr_A           79 ----YL--------QNSDVVIITAGVPRKPNM---TRS---DLLTVNAKIVGSVAENVGKY---CPNAFVICITNP  133 (328)
T ss_dssp             ----GG--------TTCSEEEECCSCCCCTTC---CSG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             ----HH--------CCCCEEEEcCCCCCCCCC---chh---hHHhhhHHHHHHHHHHHHHH---CCCeEEEEecCc
Confidence                11        468999999986432111   111   23344444444455555444   234666665543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.81  E-value=0.02  Score=52.54  Aligned_cols=84  Identities=4%  Similarity=0.009  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhc-CCcEEEEEccCCCHHHHHHHHHHH
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-------WKLK-GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~-------l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ..++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.       ..+. ..++  +..=+.+...++++++.+
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADL--IHITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSE--EEECCSSHHHHHHHHHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCE--EEEECCChHHHHHHHHHH
Confidence            34688887 58999999999999999999999999877665432       1110 1233  333455667788888777


Q ss_pred             HHHcCCCccEEEEcCC
Q 035642           82 SSIFQGKLNLLVNNAA   97 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag   97 (367)
                      .+.. .+=.++|++..
T Consensus        92 ~~~l-~~g~ivv~~st  106 (296)
T 3qha_A           92 AGHA-KPGTVIAIHST  106 (296)
T ss_dssp             HTTC-CTTCEEEECSC
T ss_pred             HHhc-CCCCEEEEeCC
Confidence            6654 33456777654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.77  E-value=0.056  Score=50.65  Aligned_cols=56  Identities=14%  Similarity=0.163  Sum_probs=41.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEccC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSVCDL   68 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~~Dl   68 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+++.+...+.  ++..+..++
T Consensus        36 ~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i  113 (340)
T 3rui_A           36 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  113 (340)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence            8999988 8999999999999998 788887753                   566667777765444  444444444

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.76  E-value=0.019  Score=56.31  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=59.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+ |-+|+++|+.|.++|+.|++++++++.++.+.+.+     .+..+.+|-++++.++++=-       ...|+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad~   71 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDADM   71 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCCE
Confidence            6889888 78999999999999999999999999887776554     46678889999988877621       45788


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|...+
T Consensus        72 ~ia~t~   77 (461)
T 4g65_A           72 LVAVTN   77 (461)
T ss_dssp             EEECCS
T ss_pred             EEEEcC
Confidence            876554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.72  E-value=0.077  Score=49.06  Aligned_cols=71  Identities=14%  Similarity=0.067  Sum_probs=51.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|.|+|| |.+|..++..|+..|. +|++.++++++++....++...      ..++... .|   .+    .       
T Consensus         4 kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~----a-------   67 (309)
T 1ur5_A            4 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---YA----D-------   67 (309)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---GG----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---HH----H-------
Confidence            7999999 9999999999999997 9999999988877655555431      2222221 12   11    1       


Q ss_pred             cCCCccEEEEcCCCC
Q 035642           85 FQGKLNLLVNNAAVA   99 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~   99 (367)
                      + ...|++|.++|..
T Consensus        68 ~-~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           68 T-ANSDVIVVTSGAP   81 (309)
T ss_dssp             G-TTCSEEEECCCC-
T ss_pred             H-CCCCEEEEcCCCC
Confidence            1 4689999999974

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.72  E-value=0.086  Score=48.42  Aligned_cols=113  Identities=10%  Similarity=-0.060  Sum_probs=71.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|+|| |+||..+|..|+.+|.  .+++++.++++++..+.++...    +........+  |.++           +
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------h
Confidence            4788895 9999999999998875  7999999988777666666541    2222222221  2211           1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                       ..-|++|-+||.....   .++.+   +.++.|..=...+.+.+.++   ...+.|+.+|-.
T Consensus        68 -~~aDvVvitAG~prkp---GmtR~---dLl~~Na~I~~~i~~~i~~~---~p~aivlvvsNP  120 (294)
T 2x0j_A           68 -KGSEIIVVTAGLARKP---GMTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTNP  120 (294)
T ss_dssp             -TTCSEEEECCCCCCCS---SSCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSSS
T ss_pred             -CCCCEEEEecCCCCCC---CCchH---HHHHHHHHHHHHHHHHHHhc---CCceEEEEecCc
Confidence             4679999999975432   22443   45677766555555555433   234666666653

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.70  E-value=0.012  Score=54.52  Aligned_cols=65  Identities=11%  Similarity=0.141  Sum_probs=45.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+|| |++|...++.+...|++|+.++ ++++.+.+ +++   |....+   |  |   .+++        ++++|+
T Consensus       145 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~v~---~--d---~~~v--------~~g~Dv  202 (315)
T 3goh_A          145 EVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR---GVRHLY---R--E---PSQV--------TQKYFA  202 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH---TEEEEE---S--S---GGGC--------CSCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc---CCCEEE---c--C---HHHh--------CCCccE
Confidence            9999999 9999999998888999999999 77776554 333   433222   3  2   1111        268999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ++.++|.
T Consensus       203 v~d~~g~  209 (315)
T 3goh_A          203 IFDAVNS  209 (315)
T ss_dssp             EECC---
T ss_pred             EEECCCc
Confidence            9999884

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.69  E-value=0.23  Score=46.28  Aligned_cols=112  Identities=13%  Similarity=0.027  Sum_probs=75.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK-----GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~-----~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.|+|+ |.+|..++..|+..|.  .|++.++++++++....++...     ..++ ....|..+              
T Consensus        23 kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~~--------------   86 (330)
T 3ldh_A           23 KITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDYSV--------------   86 (330)
T ss_dssp             EEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSSCS--------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCHHH--------------
Confidence            8999999 9999999999999997  8999999998887766666532     1122 11224322              


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      + ...|++|-+||......   ++.   .+.+..|..-...+.+.+.++   ...+.++++|-..
T Consensus        87 ~-~daDiVIitaG~p~kpG---~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 S-AGSKLVVITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             C-SSCSEEEECCSCCCCSS---CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             h-CCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence            1 56899999999753321   121   235566665555666666554   3457788877644

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.55  E-value=0.049  Score=48.71  Aligned_cols=77  Identities=12%  Similarity=0.124  Sum_probs=56.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|.|.|++|.+|+.+++.+.+. |+.|+......+.++++..    .+.+   +.+|++.++...+.+..+.+   .+++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~---~g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLID---NGIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHH---TTCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHH---cCCC
Confidence            5899999999999999999866 8988765443333333322    1223   34599999999988887766   3588


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +|+-+.|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99988873

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.53  E-value=0.047  Score=50.16  Aligned_cols=72  Identities=15%  Similarity=0.257  Sum_probs=51.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++.+ +++|.|+ |+||+++++.|...|++|++++|+.++.+.+.+    .+..  .+  +   .+++++++       
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~--~~--~---~~~l~~~l-------  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGLV--PF--H---TDELKEHV-------  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCE--EE--E---GGGHHHHS-------
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCCe--EE--c---hhhHHHHh-------
Confidence            35666 9999996 999999999999999999999999876554322    2322  22  1   12333332       


Q ss_pred             CCCccEEEEcCCC
Q 035642           86 QGKLNLLVNNAAV   98 (367)
Q Consensus        86 ~g~iD~lI~~Ag~   98 (367)
                       ...|+++++...
T Consensus       214 -~~aDvVi~~~p~  225 (300)
T 2rir_A          214 -KDIDICINTIPS  225 (300)
T ss_dssp             -TTCSEEEECCSS
T ss_pred             -hCCCEEEECCCh
Confidence             468999998874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.52  E-value=0.016  Score=54.16  Aligned_cols=72  Identities=13%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++.++|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.+      ..+.++.+|.+|++.++++-      . .+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~------i-~~a  178 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKAN------V-RGA  178 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTC------S-TTE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcC------h-hhc
Confidence            347999997 8999999999999999 999999998776 322      24668889999998877651      1 467


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.+|...+
T Consensus       179 ~~vi~~~~  186 (336)
T 1lnq_A          179 RAVIVDLE  186 (336)
T ss_dssp             EEEEECCS
T ss_pred             cEEEEcCC
Confidence            88887654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.38  E-value=0.2  Score=46.30  Aligned_cols=113  Identities=14%  Similarity=0.046  Sum_probs=74.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|.+++..|+..|  ..|++.++++++++....++....   ..+.+.. |  +.++           + 
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~-   65 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L-   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h-
Confidence            5889998 999999999999988  489999999988887666665421   1222222 2  2211           2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ...|++|..+|.....   ..+.+   +.+..|..-...+.+.+.++   ...+.|+++|-..
T Consensus        66 ~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  119 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV  119 (310)
T ss_dssp             TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            5689999999975322   22333   34566666555566655554   3457888876543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.36  E-value=0.056  Score=50.47  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=48.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|| |++|...+..+... |++|+.+++++++++.+. +   .+....   .|-++.+..+++.+.. .  +..+|
T Consensus       166 ~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~---~Ga~~~---i~~~~~~~~~~v~~~t-~--g~g~d  234 (348)
T 4eez_A          166 WQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-K---IGADVT---INSGDVNPVDEIKKIT-G--GLGVQ  234 (348)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-H---TTCSEE---EEC-CCCHHHHHHHHT-T--SSCEE
T ss_pred             EEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-h---cCCeEE---EeCCCCCHHHHhhhhc-C--CCCce
Confidence            9999987 78888777777765 779999999988765432 2   244433   2555544444333221 1  12588


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      .++.+++
T Consensus       235 ~~~~~~~  241 (348)
T 4eez_A          235 SAIVCAV  241 (348)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            8988887

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.32  E-value=0.18  Score=45.73  Aligned_cols=82  Identities=20%  Similarity=0.137  Sum_probs=58.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHH----------hcCCcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA---IIHTCSRNQTELNERLQEWK----------LKGLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~---~Vi~~~R~~~~~~~~~~~l~----------~~~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      ++.|.|+ |-+|.++++.|++.|+   +|++++|++++++++.+.+.          ..+.++.++.+   .++.+.+++
T Consensus         5 ~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~vl   80 (280)
T 3tri_A            5 NITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMVC   80 (280)
T ss_dssp             CEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHHH
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHHH
Confidence            6888887 8999999999999998   89999999988877765421          01345555544   456777888


Q ss_pred             HHHHHH-cCCCccEEEEcCCC
Q 035642           79 ETVSSI-FQGKLNLLVNNAAV   98 (367)
Q Consensus        79 ~~~~~~-~~g~iD~lI~~Ag~   98 (367)
                      +++... . .+=.++|++++.
T Consensus        81 ~~l~~~~l-~~~~iiiS~~ag  100 (280)
T 3tri_A           81 EELKDILS-ETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHH-TTTCEEEECCTT
T ss_pred             HHHHhhcc-CCCeEEEEecCC
Confidence            777665 4 222377877653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.31  E-value=0.4  Score=44.31  Aligned_cols=111  Identities=14%  Similarity=0.076  Sum_probs=67.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC----cEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGL----KVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~----~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|+|+ |.+|.+++..|+..|.  .|++.++++++++....++.....    ...+.. |  +.+    .       +
T Consensus         8 kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~----a-------l   72 (316)
T 1ldn_A            8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYD----D-------C   72 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGG----G-------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHH----H-------h
Confidence            8999999 9999999999998875  899999998766655555543211    222222 1  111    1       2


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                       ...|++|.++|+......   +.   .+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus        73 -~~aDvViia~~~~~~~g~---~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~~iv~tN  124 (316)
T 1ldn_A           73 -RDADLVVICAGANQKPGE---TR---LDLVDKNIAIFRSIVESVMAS---GFQGLFLVATN  124 (316)
T ss_dssp             -TTCSEEEECCSCCCCTTT---CS---GGGHHHHHHHHHHHHHHHHHH---TCCSEEEECSS
T ss_pred             -CCCCEEEEcCCCCCCCCC---CH---HHHHHcChHHHHHHHHHHHHH---CCCCEEEEeCC
Confidence             568999999997543211   11   123445544333444444443   23466666544

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.24  E-value=0.18  Score=46.86  Aligned_cols=117  Identities=11%  Similarity=0.089  Sum_probs=69.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +|.|+|| |.+|..++..|+..|. +|++.++++++++.....+...      ..++... .|.   +    .       
T Consensus         6 kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~----a-------   69 (322)
T 1t2d_A            6 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D----D-------   69 (322)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H----H-------
Confidence            7999998 9999999999999998 9999999998877655554421      2223221 121   1    1       


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      + ...|++|.++|........... ..-.+.+..|..-...+.+.+.++   ...+.++++|-..
T Consensus        70 l-~~aD~Vi~a~g~p~k~g~~~qe-~~r~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP~  129 (322)
T 1t2d_A           70 L-AGADVVIVTAGFTKAPGKSDKE-WNRDDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVTNPV  129 (322)
T ss_dssp             G-TTCSEEEECCSCSSCTTCCSTT-CCGGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSSH
T ss_pred             h-CCCCEEEEeCCCCCCCCCCccc-ccHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCCh
Confidence            1 4689999999964321110000 000122444444444455555444   2356777765433

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.20  E-value=0.29  Score=45.06  Aligned_cols=113  Identities=12%  Similarity=0.046  Sum_probs=71.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|.|+ |.+|..++..|+..  |++|++.++++++++....++...    .....+...  +|.+   +        +
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~--------l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D--------T   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G--------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H--------H
Confidence            5889998 99999999999985  789999999988777654444321    111111111  2211   1        1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                       ...|++|.+++.....   ..+.   .+.+..|..-...+.+.+.++   ...+.|++++-.
T Consensus        68 -~~aDvViiav~~p~~~---g~~r---~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP  120 (310)
T 1guz_A           68 -ANSDIVIITAGLPRKP---GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNP  120 (310)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSS
T ss_pred             -CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCc
Confidence             4689999999853211   1122   245666766666777776665   235777777543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.19  E-value=0.089  Score=52.95  Aligned_cols=84  Identities=12%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEccC-
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKGL--KVTGSVCDL-   68 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~~--~~~~~~~Dl-   68 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+++.+++.+.+.+.  ++..+..++ 
T Consensus       328 rVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ip  406 (615)
T 4gsl_A          328 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIP  406 (615)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeecccc
Confidence            8999988 8999999999999998 788888753                   467777777766444  445554444 


Q ss_pred             ------CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           69 ------SSREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        69 ------sd~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                            ++++....-.+.+.+.+ .+.|+||++..
T Consensus       407 m~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tD  440 (615)
T 4gsl_A          407 MIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVD  440 (615)
T ss_dssp             CTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCS
T ss_pred             ccCccccchhhhcCCHHHHHHHh-hcCCEEEecCC
Confidence                  22211111111122222 45799998876

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.09  E-value=0.21  Score=46.12  Aligned_cols=114  Identities=11%  Similarity=0.064  Sum_probs=68.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHh------cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKL------KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~------~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      .++.|.|| |.+|.+++..|+..|+ +|++.++++++++....++..      ...++... .|   .+    .+     
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d---~~----a~-----   70 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DD---YA----DI-----   70 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG----GG-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HH----Hh-----
Confidence            37999998 9999999999999998 999999998777654322221      12223221 12   11    11     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccc
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAG  150 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~  150 (367)
                         ...|++|.++|......   .+.+   +.+..|..-...+.+.+.++   ...+.++++|....
T Consensus        71 ---~~aDiVi~avg~p~~~g---~~r~---d~~~~~~~i~~~i~~~i~~~---~~~~iii~~sNp~~  125 (317)
T 2ewd_A           71 ---SGSDVVIITASIPGRPK---DDRS---ELLFGNARILDSVAEGVKKY---CPNAFVICITNPLD  125 (317)
T ss_dssp             ---TTCSEEEECCCCSSCCS---SCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHH
T ss_pred             ---CCCCEEEEeCCCCCCCC---CcHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEeCChHH
Confidence               46899999998753221   1211   12334444444555555554   23466776665443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.00  E-value=0.29  Score=46.13  Aligned_cols=41  Identities=24%  Similarity=0.228  Sum_probs=36.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      ++.|.|+ |.+|.+++..|++.|++|.+.+|+++..+.+.+.
T Consensus        31 kI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~   71 (356)
T 3k96_A           31 PIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAE   71 (356)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred             eEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence            7889987 8999999999999999999999998877766543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.99  E-value=0.051  Score=51.55  Aligned_cols=46  Identities=20%  Similarity=0.200  Sum_probs=40.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++ +++|.|+ |.+|..+|+.|.+.|++|++++++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            4667 9999997 88999999999999999999999998887777665

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.97  E-value=0.2  Score=46.47  Aligned_cols=113  Identities=10%  Similarity=0.043  Sum_probs=70.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|+ |.+|.+++..|+..|+  .|++.++++++++.....+...   .....+..   ++.+    .+        
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~--------   65 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DL--------   65 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GG--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----Hh--------
Confidence            5889998 9999999999999998  9999999988877765544321   01111111   2221    11        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVA  149 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~  149 (367)
                      ...|++|.+++.....   ..+..   +.+..|..-...+.+.+.++   ...+.||++|-..
T Consensus        66 ~~aDvViiav~~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tNp~  119 (319)
T 1a5z_A           66 KGSDVVIVAAGVPQKP---GETRL---QLLGRNARVMKEIARNVSKY---APDSIVIVVTNPV  119 (319)
T ss_dssp             TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             CCCCEEEEccCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcH
Confidence            4689999999865421   11221   33455555555555555554   2356777765443

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=94.90  E-value=0.064  Score=50.66  Aligned_cols=76  Identities=20%  Similarity=0.211  Sum_probs=55.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcC--CcEEEEEccCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ-------------------TELNERLQEWKLKG--LKVTGSVCDLS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~-------------------~~~~~~~~~l~~~~--~~~~~~~~Dls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+...+  .++..+..+++
T Consensus       120 ~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~  198 (353)
T 3h5n_A          120 KVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNIN  198 (353)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccC
Confidence            8999988 8999999999999998 788888763                   35666666666543  45666666777


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +..++..        + .+.|+||.+..
T Consensus       199 ~~~~~~~--------~-~~~DlVvd~~D  217 (353)
T 3h5n_A          199 DYTDLHK--------V-PEADIWVVSAD  217 (353)
T ss_dssp             SGGGGGG--------S-CCCSEEEECCC
T ss_pred             chhhhhH--------h-ccCCEEEEecC
Confidence            6543322        2 57899998764

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.88  E-value=0.058  Score=49.03  Aligned_cols=41  Identities=10%  Similarity=0.062  Sum_probs=36.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      ++.|.|++|.+|.++++.|++.|++|++++|+.++.+.+.+
T Consensus        13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            79999999999999999999999999999999887766543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=94.84  E-value=0.43  Score=45.22  Aligned_cols=117  Identities=14%  Similarity=0.058  Sum_probs=68.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--E---EEEEeC----ChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--I---IHTCSR----NQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~---Vi~~~R----~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.||||+|.||.+++-.++..+.  .   |++.+.    ++++++...-++..... -..-+.  +++ +.. +     
T Consensus        34 KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~-~~y-~-----  104 (375)
T 7mdh_A           34 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI-DPY-E-----  104 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES-CHH-H-----
T ss_pred             EEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec-CCH-H-----
Confidence            899999999999999999998875  2   666544    33445656666654321 111111  121 111 1     


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                        .+ ...|++|.+||.....   .++.   .+.++.|..-...+.+.+.++  ....+.|+++|-.
T Consensus       105 --~~-~daDvVVitag~prkp---G~tR---~DLl~~N~~I~k~i~~~i~~~--a~p~~ivlVvsNP  160 (375)
T 7mdh_A          105 --VF-EDVDWALLIGAKPRGP---GMER---AALLDINGQIFADQGKALNAV--ASKNVKVLVVGNP  160 (375)
T ss_dssp             --HT-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH--SCTTCEEEECSSS
T ss_pred             --Hh-CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEecCc
Confidence              12 5689999999964321   2233   345667765555555544433  1345777777653

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=94.82  E-value=0.28  Score=45.30  Aligned_cols=113  Identities=17%  Similarity=0.149  Sum_probs=70.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +|.|+|| |.+|..++..|+..|. .|++.++++++++....++...    +....+...  +|.+    .       + 
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a-------~-   65 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE----D-------M-   65 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG----G-------G-
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH----H-------h-
Confidence            4789998 9999999999998887 6999999988877655555431    212222221  1211    1       2 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ...|++|..+|.....   ..+.+   +.+..|..-...+.+.+.++   ...+.|+++|-.
T Consensus        66 ~~aD~Vi~~ag~~~k~---G~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP  118 (308)
T 2d4a_B           66 RGSDIVLVTAGIGRKP---GMTRE---QLLEANANTMADLAEKIKAY---AKDAIVVITTNP  118 (308)
T ss_dssp             TTCSEEEECCSCCCCS---SCCTH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             CCCCEEEEeCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCc
Confidence            5689999999975322   12222   33455555444555554443   345778887553

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.81  E-value=0.064  Score=48.77  Aligned_cols=82  Identities=17%  Similarity=0.101  Sum_probs=55.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHH---H
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-------WKL--KGLKVTGSVCDLSSREQREKLM---E   79 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~-------l~~--~~~~~~~~~~Dlsd~~sv~~~~---~   79 (367)
                      ++.|.|+ |.+|.++++.|++.|++|++.+|++++.+.+.+.       ..+  .+.++.++  =+.++..++.++   +
T Consensus         3 ~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~--~vp~~~~~~~v~~~~~   79 (287)
T 3pef_A            3 KFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFA--MLADPAAAEEVCFGKH   79 (287)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEE--CCSSHHHHHHHHHSTT
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEE--EcCCHHHHHHHHcCcc
Confidence            5778875 8999999999999999999999999887665431       000  12233333  345566777777   6


Q ss_pred             HHHHHcCCCccEEEEcCC
Q 035642           80 TVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag   97 (367)
                      .+.+.. .+=.++|++.+
T Consensus        80 ~l~~~l-~~~~~vi~~st   96 (287)
T 3pef_A           80 GVLEGI-GEGRGYVDMST   96 (287)
T ss_dssp             CHHHHC-CTTCEEEECSC
T ss_pred             hHhhcC-CCCCEEEeCCC
Confidence            665544 33356677654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=94.74  E-value=0.041  Score=64.59  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=52.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~iD   90 (367)
                      +|||.||+||+|.+.++.....|++|+.++++.++.+.+.+.+...+....   .|-.+.+-    .+++.+..+ .++|
T Consensus      1670 ~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v---~~~~~~~~----~~~i~~~t~g~GvD 1742 (2512)
T 2vz8_A         1670 SVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF---ANSRDTSF----EQHVLRHTAGKGVD 1742 (2512)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE---EESSSSHH----HHHHHHTTTSCCEE
T ss_pred             EEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE---ecCCCHHH----HHHHHHhcCCCCce
Confidence            999999999999999998888999999999998877666553311122211   14344322    223322221 2599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++++.|
T Consensus      1743 vVld~~g 1749 (2512)
T 2vz8_A         1743 LVLNSLA 1749 (2512)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9998875

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.71  E-value=0.079  Score=53.25  Aligned_cols=56  Identities=14%  Similarity=0.202  Sum_probs=42.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcC--CcEEEEEccC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKG--LKVTGSVCDL   68 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~--~~~~~~~~Dl   68 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|++.+++.+++.+  .++..+..++
T Consensus       329 kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I  406 (598)
T 3vh1_A          329 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  406 (598)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            8999987 7999999999999998 78888654                   257777777777643  3455555444

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.71  E-value=0.07  Score=49.01  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=35.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      ++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus         9 ~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            9 HVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            688886 5899999999999999999999999988776654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.70  E-value=0.11  Score=46.64  Aligned_cols=83  Identities=14%  Similarity=0.098  Sum_probs=56.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHH--------h--cCCcEEEEEccCCCHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWK--------L--KGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~--------~--~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      ++.|.|+ |.+|..+++.|++.|++ |.+++|++++.+.+.+.+.        +  .+.++.++.   ..+..+.+++++
T Consensus        12 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~v~~~   87 (266)
T 3d1l_A           12 PIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAELLQG   87 (266)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHHHHHH
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHHHHHH
Confidence            6889997 99999999999999998 8899999988877665431        0  012222222   334466777777


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 035642           81 VSSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~   99 (367)
                      +.... .+=.++|++.+..
T Consensus        88 l~~~~-~~~~ivv~~s~~~  105 (266)
T 3d1l_A           88 IVEGK-REEALMVHTAGSI  105 (266)
T ss_dssp             HHTTC-CTTCEEEECCTTS
T ss_pred             HHhhc-CCCcEEEECCCCC
Confidence            76543 2334677877654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=94.61  E-value=0.061  Score=50.41  Aligned_cols=74  Identities=5%  Similarity=0.096  Sum_probs=45.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+|+|+||+|++|...++.+...| ++|+.++ +.++.+.+.  +   +....   .| .+.+-. +.+.++   .++.+
T Consensus       144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~---ga~~~---~~-~~~~~~-~~~~~~---~~~g~  209 (349)
T 4a27_A          144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--D---SVTHL---FD-RNADYV-QEVKRI---SAEGV  209 (349)
T ss_dssp             CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--G---GSSEE---EE-TTSCHH-HHHHHH---CTTCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--c---CCcEE---Ec-CCccHH-HHHHHh---cCCCc
Confidence            399999999999999887666664 6888877 444444332  2   33322   24 333222 222222   22579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++.+.|.
T Consensus       210 Dvv~d~~g~  218 (349)
T 4a27_A          210 DIVLDCLCG  218 (349)
T ss_dssp             EEEEEECC-
T ss_pred             eEEEECCCc
Confidence            999999984

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.48  E-value=0.12  Score=47.82  Aligned_cols=82  Identities=12%  Similarity=0.142  Sum_probs=54.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHHH--H
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE-------WKL--KGLKVTGSVCDLSSREQREKLME--T   80 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~-------l~~--~~~~~~~~~~Dlsd~~sv~~~~~--~   80 (367)
                      ++.|.|+ |.+|..+++.|++.|++|++++|++++.+++.+.       ..+  .+.++.++  =+.+...++.++.  .
T Consensus        33 ~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~--~vp~~~~~~~v~~~~~  109 (320)
T 4dll_A           33 KITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVS--MLENGAVVQDVLFAQG  109 (320)
T ss_dssp             EEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEE--CCSSHHHHHHHHTTTC
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEE--ECCCHHHHHHHHcchh
Confidence            7888866 8999999999999999999999999887765432       110  12333333  3455666776665  4


Q ss_pred             HHHHcCCCccEEEEcCC
Q 035642           81 VSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag   97 (367)
                      +.+.. .+=.++|++..
T Consensus       110 ~~~~l-~~~~~vi~~st  125 (320)
T 4dll_A          110 VAAAM-KPGSLFLDMAS  125 (320)
T ss_dssp             HHHHC-CTTCEEEECSC
T ss_pred             HHhhC-CCCCEEEecCC
Confidence            44443 33356666654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.43  E-value=0.028  Score=51.03  Aligned_cols=72  Identities=19%  Similarity=0.350  Sum_probs=50.9

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ +++|.|+ |++|++++..|++.|++|.+++|+.++++++.+.+   +  +..  .+  +   +.+.+        
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~---~~~~~--------  184 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--S---PEEVI--------  184 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--C---GGGTG--------
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--h---HHhhh--------
Confidence            3445 8999996 79999999999999999999999988776654432   2  211  11  1   11121        


Q ss_pred             CCccEEEEcCCCCC
Q 035642           87 GKLNLLVNNAAVAV  100 (367)
Q Consensus        87 g~iD~lI~~Ag~~~  100 (367)
                      ...|++|++.....
T Consensus       185 ~~aDiVi~atp~~~  198 (275)
T 2hk9_A          185 DKVQVIVNTTSVGL  198 (275)
T ss_dssp             GGCSEEEECSSTTS
T ss_pred             cCCCEEEEeCCCCC
Confidence            35799999988653

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=94.38  E-value=0.32  Score=46.92  Aligned_cols=41  Identities=12%  Similarity=0.148  Sum_probs=34.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE   49 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~   49 (367)
                      .+.+ +++|.|. |.||+.+|+.|...|++|+++++++.+..+
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~  258 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQ  258 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHH
Confidence            3556 9999997 679999999999999999999999765443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.34  E-value=0.12  Score=47.24  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=53.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++.|.||.|.||.++++.|.+.|++|++++|+.+..  ..+.+  ...++.++.+-.   ..+.++++++.... .+=.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~--~~aDvVilavp~---~~~~~vl~~l~~~l-~~~~   93 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL--ANADVVIVSVPI---NLTLETIERLKPYL-TENM   93 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH--TTCSEEEECSCG---GGHHHHHHHHGGGC-CTTS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh--cCCCEEEEeCCH---HHHHHHHHHHHhhc-CCCc
Confidence            3799999999999999999999999999999987531  11122  245666665532   34677777765544 2223


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++++.+++
T Consensus        94 iv~~~~sv  101 (298)
T 2pv7_A           94 LLADLTSV  101 (298)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            55665553

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.21  E-value=0.07  Score=47.96  Aligned_cols=45  Identities=18%  Similarity=0.228  Sum_probs=38.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++++|.|+ |++|+++++.|.+.|++|.+++|+.++++++.+.+
T Consensus       115 l~~~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          115 LKGPALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            3337999997 78999999999999999999999998887777665

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.19  E-value=0.24  Score=44.52  Aligned_cols=81  Identities=15%  Similarity=0.165  Sum_probs=52.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH---------HHh-cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE---------WKL-KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~---------l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.|.| .|.+|.++++.|.+.|++|++++|++++.+.+.+.         ... .+.++.++.   ..+..+.++++++
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~vi~a---v~~~~~~~~~~~l   77 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL   77 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHhCCCCEEEEE---CCHHHHHHHHHHH
Confidence            578888 59999999999999999999999998877665321         000 112222222   2355677777777


Q ss_pred             HHHcCCCccEEEEcCC
Q 035642           82 SSIFQGKLNLLVNNAA   97 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag   97 (367)
                      .... .+=.++++.++
T Consensus        78 ~~~~-~~~~~vv~~~~   92 (279)
T 2f1k_A           78 IPHL-SPTAIVTDVAS   92 (279)
T ss_dssp             GGGS-CTTCEEEECCS
T ss_pred             HhhC-CCCCEEEECCC
Confidence            5544 22235666544

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.16  E-value=0.074  Score=48.26  Aligned_cols=43  Identities=16%  Similarity=0.246  Sum_probs=38.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.+
T Consensus       120 ~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          120 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            38999996 8999999999999998 7999999999998888776

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=94.12  E-value=0.59  Score=42.88  Aligned_cols=113  Identities=12%  Similarity=0.072  Sum_probs=67.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|| |.+|..++..|+..|+  +|++++|++++++....++...   .........  ++.+.           . 
T Consensus         9 kI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-----------~-   73 (319)
T 1lld_A            9 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------C-   73 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH-----------h-
Confidence            7999998 9999999999999998  9999999987665322222110   011111111  12111           1 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ...|++|.+++.....   ..+..   +.+..|..-...+.+.+.++   ...+.|+.++-.
T Consensus        74 ~~aD~Vii~v~~~~~~---g~~r~---~~~~~n~~~~~~~~~~i~~~---~~~~~vi~~~Np  126 (319)
T 1lld_A           74 RDADMVVITAGPRQKP---GQSRL---ELVGATVNILKAIMPNLVKV---APNAIYMLITNP  126 (319)
T ss_dssp             TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSS
T ss_pred             CCCCEEEECCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCceEEEecCc
Confidence            4689999999864321   12322   34556665555566666553   234566665543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=94.09  E-value=0.21  Score=43.17  Aligned_cols=71  Identities=11%  Similarity=0.061  Sum_probs=51.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++.|.| .|.+|.+++..|++.|++|++.+|+++         ...+.++.++.+-   ...++++++++.... . =.+
T Consensus        21 ~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~~-~-~~~   85 (209)
T 2raf_A           21 EITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQL-K-GKI   85 (209)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHHH-T-TSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHhc-C-CCE
Confidence            799999 699999999999999999999999876         1124456555443   667778887776554 3 235


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +++++.
T Consensus        86 vi~~~~   91 (209)
T 2raf_A           86 VVDITN   91 (209)
T ss_dssp             EEECCC
T ss_pred             EEEECC
Confidence            666654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.07  E-value=0.13  Score=47.18  Aligned_cols=40  Identities=18%  Similarity=0.260  Sum_probs=35.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ   52 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~   52 (367)
                      +|.|.|+ |.+|.++|..|++.|++|++.+|++++++...+
T Consensus        17 ~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           17 HVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            6888888 899999999999999999999999988776544

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=94.02  E-value=0.36  Score=47.43  Aligned_cols=41  Identities=17%  Similarity=0.244  Sum_probs=35.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      +|.|.|+ |-+|..+|..|++.|+.|++.++++++++...+.
T Consensus         7 kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            7 TVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            5666666 8999999999999999999999999988776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	367
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-78
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-75
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-68
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-68
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-65
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-64
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-61
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-60
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-59
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-59
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	6e-59
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-59
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-58
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-57
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-57
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	7e-57
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-56
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-56
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-56
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-56
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-56
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-55
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-55
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-55
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-53
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-52
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-52
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-52
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-52
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-52
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-52
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-51
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-51
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	7e-51
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-51
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-50
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-50
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-49
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-49
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-49
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-48
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-47
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-46
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-45
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-44
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-44
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-42
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-42
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-42
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-41
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-39
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-38
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	9e-35
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-32
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-32
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-32
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-30
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	8e-30
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-29
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-27
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-26
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-24
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-20
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-12
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	8e-10
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.002
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.004
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.004

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  237 bits (607), Expect = 8e-78
 Identities = 140/248 (56%), Positives = 178/248 (71%), Gaps = 1/248 (0%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG+RGIG+ IVEELA  GA ++TCSRNQ ELN+ L +W+ KG KV  SVCDLSSR +
Sbjct: 12  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R++LM TV++ F GKLN+LVNNA + + KEA D T E  S + S NFE+ +HLS LAHP 
Sbjct: 72  RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS  G +VFISSV+G  A P   +YG   GAM+QLT+ L  E AKDNIR N + PGVI
Sbjct: 132 LKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 191

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            TSL +    DP + + +  L+ R  + R GEP E++++VAFLCFPAASY+TGQ+I VDG
Sbjct: 192 ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 251

Query: 254 GMTVN-GF 260
           G+  N GF
Sbjct: 252 GLMANCGF 259

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  232 bits (593), Expect = 1e-75
 Identities = 152/247 (61%), Positives = 187/247 (75%), Gaps = 4/247 (1%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGGT+GIGHAIVEE AGFGA+IHTC+RN+ ELNE L +W+ KG +VTGSVCD S R +
Sbjct: 12  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPE 71

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           REKLM+TVSS+F GKL++L+NN      K  LD TAE  S   STN ES +HLS+LAHPL
Sbjct: 72  REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPL 131

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKASG G I+F+SS+AGV +A +  +Y    GA+NQL ++L CE A D IRAN++AP VI
Sbjct: 132 LKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVI 191

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T L++A+  D  K  +    +SR P+ R GEP+EVSSLVAFLC PAASYITGQ ICVDG
Sbjct: 192 ATPLAEAVYDDEFKKVV----ISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG 247

Query: 254 GMTVNGF 260
           G+TVNGF
Sbjct: 248 GLTVNGF 254

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  212 bits (542), Expect = 4e-68
 Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 8/244 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG RGIG AI +  A  GA++  C                + +       DL    +
Sbjct: 9   LVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV------AEAIGGAFFQVDLEDERE 62

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R + +E  +    G++++LVNNAA+A P  AL         +   N  +  HLS LA   
Sbjct: 63  RVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE 121

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++  G G IV ++SV G+ A      Y    G +  LT+ L  + A   IR N++APG I
Sbjct: 122 MRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAI 181

Query: 194 RT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T ++ +AI   P   +          + R G+P+EV+  V FL    AS+ITG ++ VD
Sbjct: 182 ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVD 241

Query: 253 GGMT 256
           GGMT
Sbjct: 242 GGMT 245

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  213 bits (542), Expect = 5e-68
 Identities = 141/247 (57%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG++GIG+AIVEELAG GA ++TCSRN+ EL+E L+ W+ KGL V GSVCDL SR +
Sbjct: 10  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTE 69

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
           R+KLM+TV+ +F GKLN+LVNNA V + KEA D T +  + +  TNFE+ +HLS++A+PL
Sbjct: 70  RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           LKAS NG ++F+SS+AG +A P   LY    GA+NQ+TK L CE AKDNIR NS+APGVI
Sbjct: 130 LKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVI 189

Query: 194 RTSLSDA-IRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
            T L +  I+ +P + + ++  + +TP+ R G+P EVS+L+AFLCFPAASYITGQ+I  D
Sbjct: 190 LTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWAD 249

Query: 253 GGMTVNG 259
           GG T NG
Sbjct: 250 GGFTANG 256

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  206 bits (526), Expect = 1e-65
 Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 6/243 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  GIG AI E  A  GA I           E     +  G +V    CD+S    
Sbjct: 9   VITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCDVSQPGD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E   + V S F G+ ++LVNNA +       + T E        N +S F ++K   P 
Sbjct: 67  VEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K +G G I+ ++S            Y     A    T+ L  +  KD I  N+IAP ++
Sbjct: 126 MKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLV 185

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           RT+ ++A       + +         I R   P +++   AFL    AS+ITGQ + VDG
Sbjct: 186 RTATTEASALSAMFDVLPN---MLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 242

Query: 254 GMT 256
           GM 
Sbjct: 243 GMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  202 bits (515), Expect = 6e-64
 Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 13/256 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL---KVTGSVCDLSS 70
            ITG + GIG A     A  GA +    R+   L E  Q+    G+    V   V D+++
Sbjct: 9   IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 68

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHL 126
              +++++ T    F GKL++LVNNA  A+P    K     + E      + N  SV  L
Sbjct: 69  DAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 127

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K A P L ++   I+   S  +G+ A P  P Y     A++Q T++   +  +  IR N
Sbjct: 128 TKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 187

Query: 187 SIAPGVIRTSLSDAIRHDPAKNK----IVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAA 241
           SI+PG++ T    A+      +K     +  +    P    G+P +++ ++AFL     +
Sbjct: 188 SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTS 247

Query: 242 SYITGQVICVDGGMTV 257
           SYI G  + VDGG ++
Sbjct: 248 SYIIGHQLVVDGGSSL 263

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  195 bits (496), Expect = 3e-61
 Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 7/248 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  G+G  +V+ L G GA +     N+    +   E   + + V     D+SS   
Sbjct: 10  LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHDVSSEAD 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              +M  V     G LN+LVNNA + +P +      E  S L   N ESVF   +     
Sbjct: 67  WTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAPG 191
           +K +G G I+ ++SV+          Y     A++ LT+     C +    IR NSI P 
Sbjct: 126 MKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD 184

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T +  A        ++V          R   P+ ++ LV FL    +S ++G  +  
Sbjct: 185 GIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHA 244

Query: 252 DGGMTVNG 259
           D  +   G
Sbjct: 245 DNSILGMG 252

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  193 bits (491), Expect = 2e-60
 Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 9/246 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGGT GIG AI  +    GA +    R+     +  +       ++     D S  + 
Sbjct: 10  IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDG 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
             KL +     F G ++ LVNNA +AV K   +TT      L + N + VF  ++L    
Sbjct: 69  WTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127

Query: 134 LKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAP 190
           +K  G G  I+ +SS+ G    P    Y    GA+  ++K    +C     ++R N++ P
Sbjct: 128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
           G I+T L D +              ++TP+   GEP++++ +  +L    + + TG    
Sbjct: 188 GYIKTPLVDDLPGAEEAMSQR----TKTPMGHIGEPNDIAYICVYLASNESKFATGSEFV 243

Query: 251 VDGGMT 256
           VDGG T
Sbjct: 244 VDGGYT 249

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  190 bits (484), Expect = 1e-59
 Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 13/244 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG   V+ L   GA +   +R     N  L     +   +     DL   + 
Sbjct: 9   LVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPVCVDLGDWDA 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            EK +  +     G ++LLVNNAA+ + +  L+ T E      S N  SVF +S++    
Sbjct: 65  TEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD 119

Query: 134 L-KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           +      G IV +SS+      P    Y    GAM  LTK +  E     IR NS+ P V
Sbjct: 120 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 179

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + T +   +  DP   +    L  R P+ +  E ++V + + FL    ++  +G  I VD
Sbjct: 180 VLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD 236

Query: 253 GGMT 256
            G  
Sbjct: 237 AGYL 240

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  190 bits (483), Expect = 5e-59
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 13/256 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE---RLQEWKLKGLKVTGSVCDLSS 70
            ITG + GIG       A  GA +    R+   L E    + +  +   +V   V D+++
Sbjct: 9   IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 68

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAVPK----EALDTTAEYMSTLRSTNFESVFHL 126
            + +++++ +    F GK+++LVNNA  A+P        D   +        N ++V  +
Sbjct: 69  EDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 127

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K   P L AS   I+   S VAG  A P    Y     A++Q T+    + AK  IR N
Sbjct: 128 TKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVN 187

Query: 187 SIAPGVIRTSLSDAIRHDPAKNK----IVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
           S++PG++ T  ++A+      ++     +       PI   G+P+ +++++ FL     S
Sbjct: 188 SVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLS 247

Query: 243 -YITGQVICVDGGMTV 257
            YI GQ I  DGG ++
Sbjct: 248 FYILGQSIVADGGTSL 263

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (481), Expect = 6e-59
 Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 9/246 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG RGIG  IV      GA +  C +++       +  + +       +CD++  + 
Sbjct: 10  VVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILCDVTQEDD 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHP 132
            + L+      F  +L+ +VNNA    P +   +T+A+    L   N    + L+KLA P
Sbjct: 66  VKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 124

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L+ S  G ++ ISS+ G         Y    GA+  +TK L  +++   +R N I+PG 
Sbjct: 125 YLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGN 183

Query: 193 IRTSLSDAI-RHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           I T L + +    P     +   +   P+ R G+P EV +   FL    A++ TG  + V
Sbjct: 184 IWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLV 242

Query: 252 DGGMTV 257
            GG  +
Sbjct: 243 TGGAEL 248

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 8e-59
 Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 13/244 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG   V+ L   GA +   SR Q +L+  ++E       +     DL   E 
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEA 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+ + +V     G ++LLVNNAAVA+ +  L+ T E        N  +V  +S++    
Sbjct: 67  TERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121

Query: 134 LKASGNG-IIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           L A G    IV +SS     A     +Y    GA++ LTK +  E     IR N++ P V
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVD 252
           + TS+  A   DP K    + +++R P+ +  E + V + + FL    +   TG  + V+
Sbjct: 182 VMTSMGQATWSDPHK---AKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE 238

Query: 253 GGMT 256
           GG  
Sbjct: 239 GGFW 242

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  188 bits (479), Expect = 1e-58
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 6/247 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
            +TGG+RG+G  I + LA  G  +   SRN  E +E  Q+   K G++     CD+S+ E
Sbjct: 9   LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 68

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL-AH 131
           + +KL+E V   F GKL+ +VN A +     A +   +    +   N    +++ +    
Sbjct: 69  EVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS 127

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            L ++    II   S        P    Y    G +  LTK L  E  +  IR N IAPG
Sbjct: 128 LLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG 187

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
             RT +++A+  DP K   ++ ++ R P+ R G P+++  +  FL    A Y+TGQ+I V
Sbjct: 188 WYRTKMTEAVFSDPEK---LDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFV 244

Query: 252 DGGMTVN 258
           DGG T N
Sbjct: 245 DGGWTAN 251

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  185 bits (472), Expect = 1e-57
 Identities = 72/246 (29%), Positives = 103/246 (41%), Gaps = 10/246 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG RG+G     +    GA +        E     +E    G        D++  E 
Sbjct: 9   IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEED 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++++      F G ++ LVNNA ++        + E    +   N   VF   K   P 
Sbjct: 66  WQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K +G G IV ISS AG+    LT  YG     +  L+K    E   D IR NS+ PG+ 
Sbjct: 125 MKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMT 184

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPG-EPDEVSSLVAFLCFPAASYITGQVICVD 252
            T ++             EG    TP+ R G EP E++  V  L    +SY+TG  + VD
Sbjct: 185 YTPMTAETGIRQG-----EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 239

Query: 253 GGMTVN 258
           GG T  
Sbjct: 240 GGWTTG 245

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  185 bits (471), Expect = 1e-57
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 12/244 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG A +E  A  GA +  C   +  L E  +      +     V D++    
Sbjct: 9   LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMDVADPAS 63

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E+      +   G+L+ +V+ A +           E    +   N    F ++K A   
Sbjct: 64  VERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEA 122

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++    G IV  +S   +        Y      +  LT+ L  E  +  IR N++APG I
Sbjct: 123 MREKNPGSIVLTASRVYLGNLGQAN-YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFI 181

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T ++  +       K+ E  ++ TP+ R G+P EV+    FL    +S+ITGQV+ VDG
Sbjct: 182 ETRMTAKV-----PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDG 236

Query: 254 GMTV 257
           G T+
Sbjct: 237 GRTI 240

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  185 bits (470), Expect = 3e-57
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 15/253 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSRE 72
            +TGG RGIG A    +A  GA +    R+  +  E  ++  K  G+K     CD+S+ +
Sbjct: 13  IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD 72

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              K ++ + +   G ++ L+ NA V+V K A + T E  + +   N   VF+  +    
Sbjct: 73  IVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 131

Query: 133 LLKASGN-GIIVFIS-------SVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
           L       G IV  S       + + +  +     Y     A + L K L  E A   IR
Sbjct: 132 LWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 191

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N+++PG + T  +  +       KI +   S  P+ R  +P+E++     L    A+Y+
Sbjct: 192 VNALSPGYVNTDQTAHM-----DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYM 246

Query: 245 TGQVICVDGGMTV 257
           TG    +DGG  +
Sbjct: 247 TGGEYFIDGGQLI 259

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  184 bits (467), Expect = 7e-57
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 14/255 (5%)

Query: 10  EQNYF--------ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKV 61
           E  Y+        +TG  RGIG  I + LA   + +   SR Q   +  + E K  G + 
Sbjct: 2   ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES 61

Query: 62  TGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFE 121
           +G   D+S +E+  +++  +       +++LVNNA +      L    +    +  TN  
Sbjct: 62  SGYAGDVSKKEEISEVINKIL-TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN 120

Query: 122 SVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
           S+F++++     +  +  G I+ ISS+ G+T       Y      +   TK L  E A  
Sbjct: 121 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASR 180

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           NI  N+IAPG I + ++D I     KN     ++S  P  R G P+EV++L  FL    +
Sbjct: 181 NITVNAIAPGFISSDMTDKISEQIKKN-----IISNIPAGRMGTPEEVANLACFLSSDKS 235

Query: 242 SYITGQVICVDGGMT 256
            YI G+V  +DGG++
Sbjct: 236 GYINGRVFVIDGGLS 250

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  184 bits (467), Expect = 1e-56
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 11/254 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNE---RLQEWKLKGLKVTGSVCDLSS 70
            ITG + GIG +     A  GA +    RN+  L E   ++ +  +   K+   V D++ 
Sbjct: 8   IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 67

Query: 71  REQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSK 128
              ++ ++ T  + F GK+++LVNNA   +       D   E        NF++V  +++
Sbjct: 68  ASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ 126

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                L  +   I+   S VAG  A    P Y     A++Q T+    +  +  +R NS+
Sbjct: 127 KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSV 186

Query: 189 APGVIRTSLSDAIRHDPAKNK----IVEGLVSRTPICRPGEPDEVSSLVAFLCFP-AASY 243
           +PG + T    A+      +      +       P+   G+P+E+++++ FL     +SY
Sbjct: 187 SPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSY 246

Query: 244 ITGQVICVDGGMTV 257
           I GQ I  DGG T+
Sbjct: 247 IIGQSIVADGGSTL 260

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 2e-56
 Identities = 81/253 (32%), Positives = 115/253 (45%), Gaps = 8/253 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-----LKGLKVTGSVCDL 68
            +TGG  GIG AIV+EL   G+ +   SR    L     E +      K  +V    C++
Sbjct: 16  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 75

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
            + E+   L+++    F GK+N LVNN        A   +++    +  TN    F++ K
Sbjct: 76  RNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 134

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
             +        G IV I  V      PL    G     +  LTK L  E A   IR N +
Sbjct: 135 AVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCV 193

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
           APGVI +  +    +        EG   + P  R G P+EVSS+V FL  PAAS+ITGQ 
Sbjct: 194 APGVIYSQTAVE-NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQS 252

Query: 249 ICVDGGMTVNGFN 261
           + VDGG ++   +
Sbjct: 253 VDVDGGRSLYTHS 265

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 2e-56
 Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 14/249 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSR 71
            +TG + GIG A+   L   G  +  C+R    + E   E K  G    +    CDLS+ 
Sbjct: 14  LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 73

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    +   + S     +++ +NNA +A P   L  +      + + N  ++   ++ A+
Sbjct: 74  EDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 132

Query: 132 PLLKASG--NGIIVFISSVAGVTAAPL--TPLYGPYNGAMNQLTKHL--ECEQAKDNIRA 185
             +K     +G I+ I+S++G    PL  T  Y     A+  LT+ L  E  +A+ +IRA
Sbjct: 133 QSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRA 192

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
             I+PGV+ T  +  +      +K  E   +     +  +P++V+  V ++    A    
Sbjct: 193 TCISPGVVETQFAFKLH-----DKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQI 247

Query: 246 GQVICVDGG 254
           G +     G
Sbjct: 248 GDIQMRPTG 256

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  182 bits (463), Expect = 5e-56
 Identities = 71/258 (27%), Positives = 102/258 (39%), Gaps = 17/258 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  G+G A+V+     GA +    ++   L E   +    G  V G V D+ S E 
Sbjct: 9   LITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGDVRSLED 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLR-----STNFESVFHLSK 128
           +++      + F GK++ L+ NA +     AL    E             N +   H  K
Sbjct: 66  QKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124

Query: 129 LAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
              P L AS  G ++F  S AG       PLY     A+  L + L  E A   +R N +
Sbjct: 125 ACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVRVNGV 182

Query: 189 APGVIRTSLSDAIRHDPAKNKI-----VEGLVSRTPICRPGEPDEVSSLVAFLCFPA-AS 242
             G I + L            I      + L S  PI R  E +E +    F      A+
Sbjct: 183 GSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAA 242

Query: 243 YITGQVICVDGGMTVNGF 260
             TG ++  DGG+ V GF
Sbjct: 243 PATGALLNYDGGLGVRGF 260

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 6e-56
 Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSR 71
            +TG  +GIG A  E L   GA +     N     +       + +  K     CD++ +
Sbjct: 7   LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 66

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           +Q       V   F G+L++LVNNA V   K    T           N  SV   + L  
Sbjct: 67  QQLRDTFRKVVDHF-GRLDILVNNAGVNNEKNWEKTLQ--------INLVSVISGTYLGL 117

Query: 132 PLLKASGN---GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKH--LECEQAKDNIRAN 186
             +        GII+ +SS+AG+      P+Y      +   T+   L        +R N
Sbjct: 118 DYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLN 177

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEG---LVSRTPICRPGEPDEVSSLVAFLCFPAASY 243
           +I PG + T++ ++I  +    + +E    +          +P  +++ +  L       
Sbjct: 178 AICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI--EDDA 235

Query: 244 ITGQVICVDGGMTV 257
           + G ++ +     +
Sbjct: 236 LNGAIMKITTSKGI 249

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  181 bits (460), Expect = 1e-55
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 5/249 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  GIG    +    +GA +           +           ++   CD++  E 
Sbjct: 10  IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDED 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
              L++T  +   GKL+++  N  V    P   L+   E    +   N    F ++K A 
Sbjct: 69  VRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127

Query: 132 PLLKASGNGIIVFISSVAGVTAA-PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
            ++  +  G IVF +S++  TA   ++ +Y     A+  LT  L  E  +  IR N ++P
Sbjct: 128 RVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSP 187

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            ++ + L   +    +         +          ++V+  VA+L    + Y++G  + 
Sbjct: 188 YIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLV 247

Query: 251 VDGGMTVNG 259
           +DGG T   
Sbjct: 248 IDGGYTRTN 256

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  180 bits (457), Expect = 2e-55
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 9/251 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG T GIG  I   L   G  +  C+R +  L   L+E +  G++  G  CD+ S  +
Sbjct: 6   LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L+  V   + G +++LVNNA         +   E    +  TN   VF ++K     
Sbjct: 66  IEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 124

Query: 134 --LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
             +   G G IV I+S  G         Y      +   TK L  E A+  I  N++ PG
Sbjct: 125 GGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPG 184

Query: 192 VIRTSLSDAIRHDPAKN------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT 245
            + T ++ ++R   +        +  + + +R PI R  +P EV+ +VA+L  P A+ +T
Sbjct: 185 FVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVT 244

Query: 246 GQVICVDGGMT 256
            Q + V GG+ 
Sbjct: 245 AQALNVCGGLG 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  178 bits (453), Expect = 7e-55
 Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 11/252 (4%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           +T      G      L+  G  +     +  + +E      L+    T       S ++ 
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSEQEP 58

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +L+E V+S + G++++LV+N   A   + +     E             F L       
Sbjct: 59  AELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQ 117

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K   +G I+FI+S            Y         L   L  E  + NI   +I P  +
Sbjct: 118 MKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYL 177

Query: 194 RTSLSDAIRHDPAKN---KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVIC 250
            +  S             + V  +   T + R G   E+  LVAFL   +  Y+TGQV  
Sbjct: 178 HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFW 237

Query: 251 VDGGMTVNGFNP 262
           + GG  +    P
Sbjct: 238 LAGGFPMIERWP 249

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  174 bits (441), Expect = 5e-53
 Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 6/243 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG  I    A  GA +     N    N  + E +  G +     CD++S ++
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQE 74

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L +   S   GK+++LVNNA    PK      A++        F        +A  +
Sbjct: 75  LSALADFAISKL-GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
            K  G  I+   S             Y     A + L +++  +  + NIR N IAPG I
Sbjct: 134 EKNGGGVILTITSMA-AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI 192

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T    ++       +I + ++  TPI R G+P ++++   FLC PAAS+++GQ++ V G
Sbjct: 193 LTDALKSVITP----EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248

Query: 254 GMT 256
           G  
Sbjct: 249 GGV 251

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  173 bits (439), Expect = 1e-52
 Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 11/250 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
             TG  RGIG  I  EL   GA ++     +     E + E K  G +      D+S   
Sbjct: 10  LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPS 69

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
           +   L +   S F G L+ +++N+ + V  + L+ T E    + + N    F +++    
Sbjct: 70  EVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK 128

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
             +  G  I+   S  A +T  P   LY     A+    +    +     +  N IAPG 
Sbjct: 129 HCRRGGRIIL-TSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGG 187

Query: 193 IRTSLSDAIRHDPAKN--------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           ++T + D      A          KI EGL +  P+ R G P ++   V+ LC   + +I
Sbjct: 188 VKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWI 247

Query: 245 TGQVICVDGG 254
            GQVI + GG
Sbjct: 248 NGQVIKLTGG 257

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  172 bits (437), Expect = 2e-52
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 7/249 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSR 71
            ITGG  G+G A    LA  GA +     +   L              +V  +V D+S  
Sbjct: 8   LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYM-STLRSTNFESVFHLSKLA 130
            Q E  +   +  F G+++   NNA +   +   ++        + S N   VF   +  
Sbjct: 68  AQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV 126

Query: 131 HPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAP 190
             +++  G+G++V  +SV G+        Y      +  LT++   E  +  IR N+IAP
Sbjct: 127 LKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP 186

Query: 191 GVIRTSLSDAIRHDPAKN---KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           G I T + +            K  E  +   P  R GE  E++++VAFL    ASY+   
Sbjct: 187 GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNAT 246

Query: 248 VICVDGGMT 256
           V+ +DGG +
Sbjct: 247 VVPIDGGQS 255

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 3e-52
 Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 12/246 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +T   +GIG A     A  GA +     N+     +LQE + K   +   V D++ ++Q
Sbjct: 10  ILTAAAQGIGQAAALAFAREGAKVIATDINE----SKLQELE-KYPGIQTRVLDVTKKKQ 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++    V  +      +L N A        LD   +      + N  S++ + K   P 
Sbjct: 65  IDQFANEVERLD-----VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPK 119

Query: 134 LKASGNGIIVFISSVAG-VTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A  +G I+ +SSVA  V       +Y     A+  LTK +  +  +  IR N + PG 
Sbjct: 120 MLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGT 179

Query: 193 IRT-SLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
           + T SL + I+      +     + R    R    +E++ L  +L    ++Y+TG  + +
Sbjct: 180 VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVII 239

Query: 252 DGGMTV 257
           DGG ++
Sbjct: 240 DGGWSL 245

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  171 bits (435), Expect = 4e-52
 Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 6/246 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            ITG + G+G ++    A   A +    R+ + E N  L+E K  G +      D++   
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
               L+++    F GKL++++NNA +  P  + + +    + +  TN    F  S+ A  
Sbjct: 71  DVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129

Query: 133 LLKA-SGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
                   G ++ +SSV      PL   Y    G M  +T+ L  E A   IR N+I PG
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG 189

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I T ++     DP +      + S  P+   GEP+E++++ A+L    ASY+TG  +  
Sbjct: 190 AINTPINAEKFADPEQ---RADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA 246

Query: 252 DGGMTV 257
           DGGMT+
Sbjct: 247 DGGMTL 252

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  171 bits (434), Expect = 4e-52
 Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 14/243 (5%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ++GG RG+G + V  +   GA +        E      E       V     D++   Q
Sbjct: 10  LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLDVTQPAQ 66

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            +  ++T  + F G L++LVNNA +       D        +   N   VF   +     
Sbjct: 67  WKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 125

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K +G G I+ ISS+ G+        Y     A+  LTK    E     IR NSI PG++
Sbjct: 126 MKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV 185

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T ++D +  D          + +T + R  EP EVS+LV +L    +SY TG    VDG
Sbjct: 186 KTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG 235

Query: 254 GMT 256
           G  
Sbjct: 236 GTV 238

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  171 bits (434), Expect = 9e-52
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 11/252 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG  RGIG  +  EL   G  +     N TE   E +   K  G        ++   E
Sbjct: 22  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE 81

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
              ++ E    IF GKL+++ +N+ V       D T E    + + N    F +++ A+ 
Sbjct: 82  DIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYK 140

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
            L+  G  I++   +     A P   +Y    GA+    + +  + A   I  N +APG 
Sbjct: 141 HLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGG 199

Query: 193 IRTSLSDAIRHDPAKN--------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
           I+T +  A+  +   N              V  +P+ R G P +++ +V FL      ++
Sbjct: 200 IKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWV 259

Query: 245 TGQVICVDGGMT 256
           TG+VI +DGG  
Sbjct: 260 TGKVIGIDGGAC 271

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  169 bits (428), Expect = 2e-51
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 12/244 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG   GIG A ++  A  GA +    R +  L E +   + + + V   V D+S  + 
Sbjct: 9   LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VADVSDPKA 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E +       F G+L+ + + A VA    + +   E    +   N    F +++ A  +
Sbjct: 66  VEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 124

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           L+    G +V   SVAG+ A  L   Y      +  L + L  E A+  +R N + PG+I
Sbjct: 125 LE--EGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVLLPGLI 181

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
           +T ++  +          E  V  +P+ R G P+EV+    FL    ++YITGQ + VDG
Sbjct: 182 QTPMTAGLPPW-----AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDG 236

Query: 254 GMTV 257
           G ++
Sbjct: 237 GRSI 240

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  168 bits (427), Expect = 6e-51
 Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 10/252 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSR 71
            +TG T GIG  I   LA  GA I           E+++       G+KV     DLS  
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E    L++       G++++LVNNA +       D   E    + + N  +VFH +  A 
Sbjct: 68  EAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
           P +K  G G I+ I+S  G+ A+     Y      +   TK    E A   I AN+I PG
Sbjct: 127 PHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186

Query: 192 VIRTSLSDAIRHDPAKNKIV-------EGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            +RT L +      A+   V       E L  + P  +   P+++     FL   AA+ I
Sbjct: 187 WVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQI 246

Query: 245 TGQVICVDGGMT 256
           TG  + VDGG T
Sbjct: 247 TGTTVSVDGGWT 258

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  168 bits (427), Expect = 7e-51
 Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 11/252 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG    IG A    LA  G  I     N+  L +     + KG++    VCD++S E 
Sbjct: 9   LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA 68

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
               +++V   F     L  N           D  ++  + + + N    FH+ K     
Sbjct: 69  VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQ 128

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +     G IV  +S+AGV   P    YG   GA+  LT+    + A  NIR N+I+PG +
Sbjct: 129 MITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYM 188

Query: 194 RTSLSDAIRHDPAKN-----------KIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS 242
                   + +                + + ++   P+ R G+ +E+  +VAFL    +S
Sbjct: 189 GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSS 248

Query: 243 YITGQVICVDGG 254
           ++TG  + + GG
Sbjct: 249 FMTGVNLPIAGG 260

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  168 bits (426), Expect = 7e-51
 Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 8/246 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE 72
            +TG +RGIG AI   L   G  ++   +R+     E  ++ +  G +      D+S   
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E +M+T      G ++++VNNA +      +         +   N   VF  ++ A  
Sbjct: 65  DVEAMMKTAID-AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           ++     G I+ I+SV G+        Y      +   +K    E A  NI  N + PG 
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGF 183

Query: 193 IRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF-PAASYITGQVICV 251
           I + ++  +  D  K      ++   P+ R G+P+ V+ LV FL   PAASYITGQ   +
Sbjct: 184 IASDMTAKLGEDMEKK-----ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI 238

Query: 252 DGGMTV 257
           DGG+ +
Sbjct: 239 DGGIAI 244

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  168 bits (426), Expect = 3e-50
 Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 29/252 (11%)

Query: 14  FITGGTRGIGHAIVEELAGFGAII---------HTCSRNQTELNERLQEWKLKGLKVTGS 64
            +TG   G+G A     A  GA++             +  +  ++ ++E + +G K   +
Sbjct: 11  LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVAN 70

Query: 65  VCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF 124
              +   E  EKL++T    F G+++++VNNA +   +     + E    ++  +    F
Sbjct: 71  YDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 126

Query: 125 HLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIR 184
            +++ A   +K    G I+  +S +G+        Y      +  L   L  E  K+NI 
Sbjct: 127 QVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIH 186

Query: 185 ANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI 244
            N+IAP          +  D                    +P+ V+ LV +LC  +    
Sbjct: 187 CNTIAPNAGSRMTETVMPEDLV---------------EALKPEYVAPLVLWLCHESC-EE 230

Query: 245 TGQVICVDGGMT 256
            G +  V  G  
Sbjct: 231 NGGLFEVGAGWI 242

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  166 bits (421), Expect = 3e-50
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 9/244 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG +RGIG AI E LA  GA +   + ++             G    G + +++    
Sbjct: 8   LVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLNVTDPAS 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E  +        G++++LVNNA +      +    E  + +  TN  SVF LSK     
Sbjct: 65  IES-VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA 123

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +    +G I+ I SV G         Y      +   +K L  E A   I  N +APG I
Sbjct: 124 MMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFI 183

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T ++ A+  D        G++++ P  R G   E+++ VAFL    A+YITG+ + V+G
Sbjct: 184 ETDMTRALSDDQ-----RAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNG 238

Query: 254 GMTV 257
           GM +
Sbjct: 239 GMYM 242

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  164 bits (417), Expect = 2e-49
 Identities = 64/252 (25%), Positives = 100/252 (39%), Gaps = 8/252 (3%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TG  +GIG AI   L   G  +     N         E    G        D+S R+Q
Sbjct: 5   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 64

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
               +E       G  +++VNNA VA        T E +  + + N + V    + A   
Sbjct: 65  VFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 123

Query: 134 -LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
             K    G I+   S AG    P   +Y     A+  LT+    + A   I  N   PG+
Sbjct: 124 FKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGI 183

Query: 193 IRTSLSDAIRHDPAK------NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           ++T +   I    ++               R  + R  EP++V++ V++L  P + Y+TG
Sbjct: 184 VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTG 243

Query: 247 QVICVDGGMTVN 258
           Q + +DGGM  N
Sbjct: 244 QSLLIDGGMVFN 255

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (415), Expect = 2e-49
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG RGIG AI + LA  G  +    R                  + G   D++  + 
Sbjct: 11  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDA 59

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++    V       + +LV+NA ++     +  T E    + + N    F +++ A   
Sbjct: 60  VDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 118

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           ++ +  G ++FI SV+G+        Y      +  + + +  E +K N+ AN +APG I
Sbjct: 119 MQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYI 178

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T ++ A+        I +G +   P  R G P EV+ +V+FL    ASYI+G VI VDG
Sbjct: 179 DTDMTRALDER-----IQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDG 233

Query: 254 GMT 256
           GM 
Sbjct: 234 GMG 236

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  163 bits (413), Expect = 4e-49
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 20/243 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +   +RGIG A+ + L+  GA +  C+RN+  L                 VCDL  R+ 
Sbjct: 8   LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---------SGHRYVVCDL--RKD 56

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            + L E V      ++++LV NA         + T E       + F ++  + +   P 
Sbjct: 57  LDLLFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 111

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVI 193
           +K  G G IV I+S + ++             A+    K L  E A   I  N +APG  
Sbjct: 112 MKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWT 171

Query: 194 RTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDG 253
            T     +  +  K ++     S+ P+ R  +P+E++S+VAFLC   ASY+TGQ I VDG
Sbjct: 172 ETERVKELLSEEKKKQVE----SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG 227

Query: 254 GMT 256
           G++
Sbjct: 228 GLS 230

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  163 bits (414), Expect = 2e-48
 Identities = 61/246 (24%), Positives = 102/246 (41%), Gaps = 5/246 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSRE 72
           FITGG  G+G  +   L+  GA     SR    L    ++   + G KV    CD+   +
Sbjct: 29  FITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD 88

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVF-HLSKLAH 131
             +  +  +  +  G  N+++NNAA          +     T+             ++  
Sbjct: 89  MVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK 147

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPG 191
            L+KA      + I+++   T +            +  ++K L  E  K  +R N I PG
Sbjct: 148 QLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPG 207

Query: 192 VIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV 251
            I+T  + +        +  + ++ R P  R G  +E+++L AFLC   AS+I G VI  
Sbjct: 208 PIKTKGAFSRLDPTGTFE--KEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKF 265

Query: 252 DGGMTV 257
           DGG  V
Sbjct: 266 DGGEEV 271

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  160 bits (405), Expect = 1e-47
 Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 11/252 (4%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG  RGIG A  E     GA +     N         E    G        D++ +  
Sbjct: 9   LITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQAS 65

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            ++ +  +   + G +++LVNNAA+      ++ T E    L + N      + +     
Sbjct: 66  IDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA 124

Query: 134 LKASGNGIIVFI-SSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGV 192
           + A G G  +   +S AG     L  +Y     A+  LT+       +  I  N+IAPGV
Sbjct: 125 MIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGV 184

Query: 193 IRTSLSDAIRHDPA------KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +     D +    A      + +    + +  P  R G  ++++ +  FL  P A YI  
Sbjct: 185 VDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVA 244

Query: 247 QVICVDGGMTVN 258
           Q   VDGG  ++
Sbjct: 245 QTYNVDGGNWMS 256

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  156 bits (396), Expect = 2e-46
 Identities = 48/252 (19%), Positives = 84/252 (33%), Gaps = 28/252 (11%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +TGG  G+G A    L   G  +      +            +G  +     D++  E 
Sbjct: 5   LVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTREED 52

Query: 74  REKLMETVSSIFQGK--LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
             + +            ++      A  +  +      E    +   N    F++ +LA 
Sbjct: 53  VRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 112

Query: 132 PL------LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
                         G+IV  +SVA          Y    G +  LT     E A   IR 
Sbjct: 113 WAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRV 172

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYI 244
            ++APG+  T L   +            L ++ P   R G P+E ++LV  +       +
Sbjct: 173 VTVAPGLFDTPLLQGLPEKAK-----ASLAAQVPFPPRLGRPEEYAALVLHIL--ENPML 225

Query: 245 TGQVICVDGGMT 256
            G+V+ +DG + 
Sbjct: 226 NGEVVRLDGALR 237

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  154 bits (390), Expect = 1e-45
 Identities = 53/251 (21%), Positives = 94/251 (37%), Gaps = 24/251 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQTELNERLQEWKLKGLKVTGSVC 66
            ITG  +GIG AI  E A           ++   SR   +L +   E + +G        
Sbjct: 5   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITA 64

Query: 67  DLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
           D+S      +L   +   + G ++ LVNNA V       D T E      +TN +  F L
Sbjct: 65  DISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 123

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           ++    L++   +G I FI+SVA   A   + +Y         L + +     K N+R  
Sbjct: 124 TQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 183

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
            + PG + T +   +  +                     P+++++ V       +  +  
Sbjct: 184 DVQPGAVYTPMWGKVDDEMQA--------------LMMMPEDIAAPVVQAYLQPSRTVVE 229

Query: 247 QVIC--VDGGM 255
           ++I     G +
Sbjct: 230 EIILRPTSGDI 240

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  152 bits (385), Expect = 1e-44
 Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 13/252 (5%)

Query: 14  FITGGT--RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            + G T  R +G AI  +L   GA +    + +  L    ++             D++  
Sbjct: 12  LVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFRADVTQD 70

Query: 72  EQREKLMETVSSIFQGKLNLLVNNA----AVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           E+ + L   V     G L+ LV+        A+    +DT  +        +  S+  ++
Sbjct: 71  EELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVA 129

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           + A PLL+    G IV ++  A     P   +      A+    ++L  E     +R N+
Sbjct: 130 RRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNA 187

Query: 188 IAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ 247
           I+ G +RT    A R  P   K+ + +    P+ R    +EV +L  FL  P AS ITG+
Sbjct: 188 ISAGPVRT---VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGE 244

Query: 248 VICVDGGMTVNG 259
           V+ VD G  + G
Sbjct: 245 VVYVDAGYHIMG 256

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  152 bits (384), Expect = 1e-44
 Identities = 45/248 (18%), Positives = 75/248 (30%), Gaps = 20/248 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQ-EWKLKGLKVTGSVCDLS-SR 71
                  GIG     EL                     + +     + +T    D++   
Sbjct: 9   IFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPV 68

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
            + +KL++ +       +++L+N A +    +   T A         NF  + + +    
Sbjct: 69  AESKKLLKKIFDQL-KTVDILINGAGILDDHQIERTIA--------INFTGLVNTTTAIL 119

Query: 132 PLLKAS---GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSI 188
                      GII  I SV G  A    P+Y     A+   T  L        + A SI
Sbjct: 120 DFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179

Query: 189 APGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQV 248
            PG+ RT L             VE  V+   +  P +  E             +   G +
Sbjct: 180 NPGITRTPLVHTFNSWLD----VEPRVAELLLSHPTQTSEQ--CGQNFVKAIEANKNGAI 233

Query: 249 ICVDGGMT 256
             +D G  
Sbjct: 234 WKLDLGTL 241

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (368), Expect = 2e-42
 Identities = 56/229 (24%), Positives = 85/229 (37%), Gaps = 6/229 (2%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITG   GIG     E A   + +     N+  L E   + K  G KV   V D S+RE 
Sbjct: 11  LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRED 70

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
                + V +   G +++LVNNA V    +   T    +      N  + F  +K   P 
Sbjct: 71  IYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129

Query: 134 LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK---DNIRANSIAP 190
           +  + +G IV ++S AG  + P    Y     A     K L  E A      ++   + P
Sbjct: 130 MTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP 189

Query: 191 GVIRTSLSDAIRHDPAKNKIVEGLVSRTP--ICRPGEPDEVSSLVAFLC 237
             + T                E +V+R    I    +   + S +AFL 
Sbjct: 190 NFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLT 238

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  145 bits (367), Expect = 6e-42
 Identities = 58/266 (21%), Positives = 95/266 (35%), Gaps = 31/266 (11%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSS-- 70
           ITGG R IGH+I   L   G  +    R+     +RL       +         DLS   
Sbjct: 6   ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS 65

Query: 71  --REQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMST-------------- 114
              +  E +++     F G+ ++LVNNA+   P   L       +               
Sbjct: 66  SLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124

Query: 115 --LRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTK 172
               +  F       +        S N  +V +         P   +Y     A+  LT+
Sbjct: 125 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTR 184

Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRP-GEPDEVSS 231
               E A  +IR N++APG+     +          +  E    + P+ +      +++ 
Sbjct: 185 AAALELAPRHIRVNAVAPGLSLLPPAMP-------QETQEEYRRKVPLGQSEASAAQIAD 237

Query: 232 LVAFLCFPAASYITGQVICVDGGMTV 257
            +AFL    A YITG  + VDGG+ +
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLIL 263

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (365), Expect = 9e-42
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 16/248 (6%)

Query: 15  ITGGTRGIGHAIVEELAGF---GAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLS 69
           +TG +RG G A+  +LA     G+++   +R+++ L +  +E   +   LKV  +  DL 
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70

Query: 70  SREQREK---LMETVSSIFQGKLNLLVNNA---AVAVPKEALDTTAEYMSTLRSTNFESV 123
           +    ++    +  +      +  LL+NNA                  ++   + N  S+
Sbjct: 71  TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM 130

Query: 124 FHLSKLAHPLLKASGN--GIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKD 181
             L+       + S      +V ISS+  +       LY     A + L + L  E  + 
Sbjct: 131 LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EP 188

Query: 182 NIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA 241
           ++R  S APG +   +    R      ++   L          +    +  +  L     
Sbjct: 189 SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL-QKD 247

Query: 242 SYITGQVI 249
           ++ +G  +
Sbjct: 248 TFQSGAHV 255

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  142 bits (358), Expect = 9e-41
 Identities = 49/255 (19%), Positives = 102/255 (40%), Gaps = 14/255 (5%)

Query: 14  FITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG      I + I + +   GA +    +N  +L  R++E+  +        CD++  
Sbjct: 9   LVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAED 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTT-----AEYMSTLRSTNFESVFHL 126
              + +   +  ++  K +  V++   A   +           E        +  S   +
Sbjct: 68  ASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAM 126

Query: 127 SKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRAN 186
           +K    +L       ++ +S +    A P   + G    ++    +++      + +R N
Sbjct: 127 AKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVN 184

Query: 187 SIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG 246
           +I+ G IRT    A        K++    + TPI R    ++V +  AFLC   ++ I+G
Sbjct: 185 AISAGPIRT---LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG 241

Query: 247 QVICVDGGMTVNGFN 261
           +V+ VDGG ++   N
Sbjct: 242 EVVHVDGGFSIAAMN 256

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  138 bits (349), Expect = 2e-39
 Identities = 59/264 (22%), Positives = 94/264 (35%), Gaps = 40/264 (15%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            I+G   GIG A  + L   G  I        E+                 + DLS+ E 
Sbjct: 5   VISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAEG 47

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAE--------------------YMS 113
           R++ +  V +     ++ LV  A +    + L                         +  
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQP 107

Query: 114 TLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL-YGPYNGAMNQLTK 172
                +  +  HL+   +PL  A   G      ++          L Y     A+    +
Sbjct: 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR 167

Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
                  +  +R N+IAPG   T L  A   DP   + +       P+ R  EP E++S+
Sbjct: 168 KRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FVPPMGRRAEPSEMASV 225

Query: 233 VAFLCFPAASYITGQVICVDGGMT 256
           +AFL  PAASY+ G  I +DGG+ 
Sbjct: 226 IAFLMSPAASYVHGAQIVIDGGID 249

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (344), Expect = 2e-38
 Identities = 41/255 (16%), Positives = 81/255 (31%), Gaps = 24/255 (9%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSR------NQTELNERLQEWKLKGLKVTGSVCD 67
            ITG + GIG  +   LA   +              Q  L E  +        +     D
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 68  LSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLS 127
           +   +      E V+      L     NA + +         + ++++   N      + 
Sbjct: 66  VRDSKSVAAARERVTEGRVDVLV---CNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 128 KLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
           +   P +K  G+G ++   SV G+   P   +Y     A+  L + L        +  + 
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182

Query: 188 IAPGVIRTSLSDAIRHDPAK----------NKIVEGL--VSRTPICRPGEPDEVSSLVAF 235
           I  G + T+  + +   P +          ++  + L    +        P+EV+ +   
Sbjct: 183 IECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLT 242

Query: 236 LCF---PAASYITGQ 247
                 P   Y T +
Sbjct: 243 ALRAPKPTLRYFTTE 257

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (326), Expect = 3e-36
 Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 16/247 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG  G+G A  E L G GA         +    + ++     +     V      + 
Sbjct: 9   VITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQT 68

Query: 74  REKLMETVSSIF--QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
              L +              +   +     K+    T E    +   N    F++ +L  
Sbjct: 69  ALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 128

Query: 132 PLLKAS------GNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRA 185
             +  +        G+I+  +SVA          Y    G +  +T  +  + A   IR 
Sbjct: 129 GEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRV 188

Query: 186 NSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC-RPGEPDEVSSLVAFLCFPAASYI 244
            +IAPG+  T L  ++       K+   L S+ P   R G+P E + LV  +      ++
Sbjct: 189 MTIAPGLFGTPLLTSLP-----EKVCNFLASQVPFPSRLGDPAEYAHLVQAII--ENPFL 241

Query: 245 TGQVICV 251
            G+VI +
Sbjct: 242 NGEVIRL 248

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 9e-35
 Identities = 55/283 (19%), Positives = 93/283 (32%), Gaps = 71/283 (25%)

Query: 15  ITGGTRGIGHAIVEELAG-FGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
           +TGG +GIG AIV +L   F   +   +R+ T     +Q+ + +GL       D+   + 
Sbjct: 8   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS 67

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
              L + +   + G L++LVNNA +A                  TNF     +     PL
Sbjct: 68  IRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 126

Query: 134 LKASGNGIIVFISSVAGVTAAPL------------------------------------- 156
           +K  G   +V +SS+  V A                                        
Sbjct: 127 IKPQGR--VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK 184

Query: 157 ----TPLYGPYNGAMNQLTKHLECEQAK----DNIRANSIAPGVIRTSLSDAIRHDPAKN 208
               +  YG     +  L++    + ++    D I  N+  PG +RT ++          
Sbjct: 185 EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK------- 237

Query: 209 KIVEGLVSRTPICRPGEPDEVSSLVAFLCF--PAASYITGQVI 249
                            P+E +    +L    P A    GQ +
Sbjct: 238 -------------ATKSPEEGAETPVYLALLPPDAEGPHGQFV 267

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  119 bits (300), Expect = 1e-32
 Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 31/249 (12%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            + GG   +G   V+        + +    + E        K             S  EQ
Sbjct: 6   LVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDSFTEQ 55

Query: 74  REKLMETVSSIF-QGKLNLLVNNAAVAVPKEALDTTAEYM-STLRSTNFESVFHLSKLAH 131
            +++   V  +    K++ ++  A       A   +       +   +  +    S LA 
Sbjct: 56  ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT 115

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIA 189
                   G++    + A +   P    YG   GA++QL + L  +         A ++ 
Sbjct: 116 K--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVL 173

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
           P  + T ++     +                      + +               +G +I
Sbjct: 174 PVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRPNSGSLI 220

Query: 250 CV--DGGMT 256
            V    G T
Sbjct: 221 QVVTTDGKT 229

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  120 bits (302), Expect = 2e-32
 Identities = 60/283 (21%), Positives = 97/283 (34%), Gaps = 48/283 (16%)

Query: 15  ITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQE------------------WK 55
           +TG  + +G +I E L   G  +     R+  E N                         
Sbjct: 7   VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 66

Query: 56  LKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYM--- 112
              +        ++   +  +L+    + + G+ ++LVNNA+   P   L    +     
Sbjct: 67  TAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPC 125

Query: 113 -----------STLRSTNFESVFHLSKLAH------PLLKASGNGIIVFISSVAGVTAAP 155
                      + L  +N  + + L K         P      N  I+ +          
Sbjct: 126 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL 185

Query: 156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLV 215
              +Y    GA+  LT+    E A   IR N + PG+           D     + EG  
Sbjct: 186 GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV-------DDMPPAVWEGHR 238

Query: 216 SRTPIC-RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV 257
           S+ P+  R     EVS +V FLC   A YITG  + VDGG ++
Sbjct: 239 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 5e-32
 Identities = 48/248 (19%), Positives = 88/248 (35%), Gaps = 19/248 (7%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW-KLKGLKVTGSVCDLSSRE 72
            +TG ++GIG  +   LA  GA +   +R++  L + +    +L           +    
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77

Query: 73  QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHP 132
             E+ +     +  G L++L+ N               ++      NF S   L+  A P
Sbjct: 78  FAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP 136

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHL--ECEQAKDNIRANSIAP 190
           +LK S  G IV +SS+AG  A P+   Y     A++     +  E   ++ N+       
Sbjct: 137 MLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL 195

Query: 191 GVIRTSLSDAIRHDPAK----------NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA 240
           G+I T  +                    +I++G   R    +     + S     L    
Sbjct: 196 GLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALR----QEEVYYDSSLWTTLLIRNP 251

Query: 241 ASYITGQV 248
           +  I   +
Sbjct: 252 SRKILEFL 259

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  114 bits (285), Expect = 2e-30
 Identities = 36/252 (14%), Positives = 82/252 (32%), Gaps = 33/252 (13%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            + GG   +G AI+E     G  +     +  +  +                 + +  EQ
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTEQ 55

Query: 74  REKLMETVSSIFQ-GKLNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKLAH 131
            + ++E  +S  Q  +++ +   A       A      +    +   +  S    +KLA 
Sbjct: 56  EQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT 115

Query: 132 PLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAK--DNIRANSIA 189
                   G++    + A +   P    YG    A++ LT  L  + +   DN    +I 
Sbjct: 116 T--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 173

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLV-AFLCFPAASYITGQV 248
           P  + T ++     +   +                    +S  +  +    ++   +G +
Sbjct: 174 PVTLDTPMNRKWMPNADHS-------------SWTPLSFISEHLLKWTTETSSRPSSGAL 220

Query: 249 ICV---DGGMTV 257
           + +   +G  T+
Sbjct: 221 LKITTENGTSTI 232

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  113 bits (283), Expect = 8e-30
 Identities = 51/250 (20%), Positives = 94/250 (37%), Gaps = 9/250 (3%)

Query: 14  FITG--GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            I G    + I + I +     GA +     N+  L +R++    +         D+S  
Sbjct: 9   LIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKE 67

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAH 131
           E  + L  +V     G L+ +V++ A A  +    +  E   +  +T  E   +      
Sbjct: 68  EHFKSLYNSVKK-DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELT 126

Query: 132 PLLKASGNGIIVFISSV--AGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
             LK   N     ++              + G    A+    ++L  +  K +IR N+++
Sbjct: 127 NTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALS 186

Query: 190 PGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVI 249
            G IRT  S  I        I++      P+ +    +EV +   +L    +S ++G+V 
Sbjct: 187 AGPIRTLASSGIADFR---MILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVH 243

Query: 250 CVDGGMTVNG 259
            VD G  V G
Sbjct: 244 FVDAGYHVMG 253

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  109 bits (274), Expect = 9e-29
 Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 25/209 (11%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIH--TCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            +TG  RGIG  +V++L     I H    +R+  +  E       K  +V      ++  
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCD 63

Query: 72  EQREKLMETVSSIFQGK-LNLLVNNAAVAVPKEAL-DTTAEYMSTLRSTNFESVFHLSKL 129
           +  +  +  V  I     L+LL+NNA V +      +     ++     N  SV  L++ 
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQK 123

Query: 130 AHPLLKASGNGIIVFISSV------------------AGVTAAPLTPLYGPYNGAMNQLT 171
             PLLK + +       SV                     +A      Y     A+N   
Sbjct: 124 LLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFG 183

Query: 172 KHLECEQAKDNIRANSIAPGVIRTSLSDA 200
           + L  +   DN+   +  PG ++T+L   
Sbjct: 184 RTLAVDLKDDNVLVVNFCPGWVQTNLGGK 212

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  105 bits (263), Expect = 3e-27
 Identities = 50/262 (19%), Positives = 87/262 (33%), Gaps = 40/262 (15%)

Query: 12  NYFITGGTRGIGHAIVEELAGF---GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDL 68
           +  ITG  RG+G  +V+ L         + T  RN+ +  E L++       +     DL
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62

Query: 69  SSREQREKLMETVSSI--FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHL 126
            + +  +KL+  +  +   QG   L  N              ++ +     TN      L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 127 SKLAHPLLKASG-----------NGIIVFISSVAGVTAAPLTPLYGPYN---GAMNQLTK 172
           +K   PLLK +               I+ +SS+ G            Y     A+N  TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 173 HLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
            L  +     I   S+ PG ++T +  +                  P+  P    ++   
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------SAPLDVPTSTGQIVQT 226

Query: 233 VAFLCFPAASYITGQVICVDGG 254
           ++ L         G  +  DG 
Sbjct: 227 ISKL----GEKQNGGFVNYDGT 244

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  103 bits (256), Expect = 5e-26
 Identities = 44/254 (17%), Positives = 74/254 (29%), Gaps = 12/254 (4%)

Query: 14  FITG--GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSR 71
            ++G      I   I       GA +     ++  L +R+ +       +          
Sbjct: 10  LVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEH 69

Query: 72  EQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTL--RSTNFESVFHLSKL 129
                   T +     KL+ +V++                            S +  + +
Sbjct: 70  LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM 129

Query: 130 AHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIA 189
           A  LL     G  +         A P          A+  + + +  E  K  +R+N +A
Sbjct: 130 AKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVA 189

Query: 190 PGVIRTSLSDAIRHDPAKNK-------IVEGLVSRTPICR-PGEPDEVSSLVAFLCFPAA 241
            G IRT    AI       +       + EG   R PI     +   V+  V  L     
Sbjct: 190 AGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWL 249

Query: 242 SYITGQVICVDGGM 255
              TG +I  DGG 
Sbjct: 250 PATTGDIIYADGGA 263

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 99.4 bits (246), Expect = 2e-24
 Identities = 55/281 (19%), Positives = 83/281 (29%), Gaps = 38/281 (13%)

Query: 14  FITG--GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLK----------- 60
           FI G     G G A+ + LA  GA I   +             + K  +           
Sbjct: 12  FIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLME 71

Query: 61  ---------------------VTGSVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVA 99
                                        SS    ++  E V   F     L+ + A   
Sbjct: 72  IKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGP 131

Query: 100 VPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL 159
              + L  T+        +     F         +   G   I      +          
Sbjct: 132 EVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGG 191

Query: 160 YGPYNGAMNQLTKHLECEQAKDN-IRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRT 218
                 A+   T+ L  E  +   IR N+I+ G + +  + AI        ++E   +  
Sbjct: 192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID---TMIEYSYNNA 248

Query: 219 PICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNG 259
           PI +    DEV +  AFL  P AS ITG  I VD G+   G
Sbjct: 249 PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.6 bits (215), Expect = 4e-20
 Identities = 53/327 (16%), Positives = 103/327 (31%), Gaps = 77/327 (23%)

Query: 9   NEQNYFITG--GTRGIGHAIVEELAGFGA-----------IIHTCSRNQTELNERLQEWK 55
           NE   FI G   T G G  I +EL+                I   +    + +  +   K
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 56  LKGLKVTGSV---------------------CDLSSREQREKLMETVSSIFQGKLNLLVN 94
            K + +   +                      ++      E +   +   + GK+N+LV+
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVH 119

Query: 95  NAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT 152
           + A A    K+ L+T+ +      S +  S+  L K    ++K   + I +   +   V 
Sbjct: 120 SLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 153 AAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAI----------- 201
                 +        +             NIR N+I+ G +++  + AI           
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT 239

Query: 202 -----------------------------RHDPAKNKIVEGLVSRTPICRPGEPDEVSSL 232
                                        ++    +  +E      P+ +     ++ S+
Sbjct: 240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSV 299

Query: 233 VAFLCFPAASYITGQVICVDGGMTVNG 259
            +FL    +  ITGQ I VD G+ +  
Sbjct: 300 ASFLLSRESRAITGQTIYVDNGLNIMF 326

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 62.4 bits (150), Expect = 5e-12
 Identities = 18/182 (9%), Positives = 51/182 (28%), Gaps = 1/182 (0%)

Query: 15  ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQR 74
           + GGT  +G  +   LA  G  I   SR + +   +  E++      + +        + 
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 75  EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL 134
             +           ++   +   +   K  +          +   + S    +++   +L
Sbjct: 65  CDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVL 123

Query: 135 KASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIR 194
           ++      +     A          +       +  +K +      +      +  G + 
Sbjct: 124 ESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLS 183

Query: 195 TS 196
            S
Sbjct: 184 NS 185

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 56.4 bits (135), Expect = 4e-10
 Identities = 22/175 (12%), Positives = 45/175 (25%), Gaps = 15/175 (8%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            +  GT  +G      LAG GA +  C R   +          +  KV  +  + +    
Sbjct: 27  VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDAS 85

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTN-FESVFHLSKLAHP 132
           R + ++          + +    A+ +                S            L   
Sbjct: 86  RAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIVADYNAQPPLGIG 133

Query: 133 LLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANS 187
            + A+  G         G            +   + +L +  E     + I   +
Sbjct: 134 GIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAEEIYKLA 187

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 56.6 bits (135), Expect = 8e-10
 Identities = 39/192 (20%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 7   WSNEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW--KLKGLKVTG 63
           W       +TGGT G+G  I   LA  GA  +   SR+  +  +   E   +L+ L    
Sbjct: 6   WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGART 64

Query: 64  SVCDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESV 123
           +V      ++               L+ + + AA          T E +           
Sbjct: 65  TVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA 124

Query: 124 FHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNI 183
            +L +L   L         V  SS A    AP    Y P N  ++ L +    +     +
Sbjct: 125 RNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDG----L 176

Query: 184 RANSIAPGVIRT 195
            A ++A G    
Sbjct: 177 PATAVAWGTWAG 188

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 25/147 (17%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ 73
            ITGG   +G  + ++L   G  +       T     ++ W      +     +L + + 
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDV 58

Query: 74  REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL 133
            E L   V  I+        + A+ A P   +    + +     TN     ++  LA   
Sbjct: 59  VEPLYIEVDQIY--------HLASPASPPNYMYNPIKTL----KTNTIGTLNMLGLAK-- 104

Query: 134 LKASGNGI-IVFISSVAGVTAAPLTPL 159
                 G  ++  S+        + P 
Sbjct: 105 ----RVGARLLLASTSEVYGDPEVHPQ 127

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 18/145 (12%)

Query: 12  NYFITGGTRGIGHAIVEEL--AGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLS 69
              ITGG   IG A+V  +       +++          E L +   +  +      D+ 
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADIC 60

Query: 70  SREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKL 129
              +  ++ E      Q + + +++ AA +    ++   A ++     TN    + L ++
Sbjct: 61  DSAEITRIFE------QYQPDAVMHLAAESHVDRSITGPAAFI----ETNIVGTYALLEV 110

Query: 130 AH-----PLLKASGNGIIVFISSVA 149
           A             N     IS+  
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDE 135

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 36.7 bits (83), Expect = 0.004
 Identities = 28/217 (12%), Positives = 49/217 (22%), Gaps = 15/217 (6%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW--KLKGLKVTGSVCDLSSR 71
            I GGT  IG  IV      G   +   R +   N    +     K L        L   
Sbjct: 7   LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 72  EQREK------------LMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTN 119
           ++                   +S     +L L+         K  L +       +    
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA 126

Query: 120 FESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQA 179
            +           + +A     I +    + + A          +G M      +     
Sbjct: 127 LQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD 186

Query: 180 KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS 216
            +          V       +I      NK +     
Sbjct: 187 GNVKGIWVDEDDVGT-YTIKSIDDPQTLNKTMYIRPP 222

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 16/141 (11%)

Query: 14  FITGGTRGIGHAIVEELAGFGAIIHTCSR-----NQTELNERLQEWKLKGLKVTGSVCDL 68
            ITG T   G  + E L   G  +H   R     N   ++   Q+      K      DL
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64

Query: 69  SSREQREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSK 128
           S      +++       + + + + N  A++    + ++           +      L +
Sbjct: 65  SDTSNLTRILR------EVQPDEVYNLGAMSHVAVSFESPEYTA----DVDAMGTLRLLE 114

Query: 129 LAHPLLKASGNGIIVFISSVA 149
                L           S+  
Sbjct: 115 AIR-FLGLEKKTRFYQASTSE 134

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	367
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.87
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.86
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.79
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.78
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.78
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.77
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.76
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.75
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.75
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.75
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.72
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.71
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.7
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.7
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.64
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.63
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.4
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.4
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.35
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.24
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.24
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.2
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.99
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.06
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.93
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.79
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.77
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.74
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.66
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.66
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.6
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.59
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.52
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.49
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.49
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.48
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.44
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.32
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.26
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.25
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.21
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.18
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.15
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.15
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.05
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.02
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.99
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.97
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.96
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.92
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.9
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.88
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.77
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.76
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.76
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.72
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.68
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.68
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.68
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.63
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.63
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.63
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.6
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.6
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.6
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.58
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.54
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.5
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.5
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.49
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.43
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.39
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.36
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.33
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.31
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.21
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.94
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.87
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.82
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.77
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.71
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.29
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.1
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.05
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.97
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.88
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.82
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.77
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.61
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.42
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.3
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.24
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.16
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.99
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.91
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.83
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.82
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.79
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.67
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.44
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.41
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.38
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.22
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.06
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.06
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.95
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.79
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.79
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.61
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.59
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.34
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.32
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.08
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.07
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.0
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.84
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.82
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.79
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.62
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.6
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.51
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.49
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.43
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	91.43
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	90.92
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.82
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.79
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.52
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.25
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.95
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.92
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	89.81
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.79
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.57
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.36
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.34
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.26
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	88.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	88.48
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.4
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	87.73
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	87.7
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.69
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.62
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.25
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.21
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	87.2
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	86.77
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	86.73
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	86.64
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	86.4
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	86.06
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	85.9
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	85.84
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	85.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.32
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	85.09
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.92
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.85
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.55
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	84.54
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.34
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.6
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.43
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	83.41
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	83.11
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	83.02
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	82.97
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	82.92
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	82.83
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.69
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	81.57
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	81.38
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	80.86
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	80.47
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	80.44
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	80.35
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	80.2
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.11
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	80.07
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.02
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	80.02

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.5e-55  Score=404.98  Aligned_cols=253  Identities=55%  Similarity=0.883  Sum_probs=239.0

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|+++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.++.||++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            478888 9999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      +++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            84489999999999988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+|++|.|++++|||||+|+||+++|++...........+..+.+....|++|+++|+|+|++++||+|++++++
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  242 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  242 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            99999999999999999999999999999999987766665555667778889999999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      ||+.|.||||+...
T Consensus       243 tG~~i~VDGG~~a~  256 (259)
T d2ae2a_         243 TGQIIYVDGGLMAN  256 (259)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEECCCeEee
Confidence            99999999999764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-55  Score=404.55  Aligned_cols=251  Identities=30%  Similarity=0.457  Sum_probs=235.9

Q ss_pred             CCCCCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642            1 MYSYVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         1 ~~~~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      ||.+..|+++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.+++||++|+++++++++
T Consensus         1 m~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_           1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Confidence            88888899998 99999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCcc
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      ++.+++ |++|++|||||+....++ +.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+
T Consensus        81 ~~~~~~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~  158 (255)
T d1fmca_          81 FAISKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS  158 (255)
T ss_dssp             HHHHHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHHc-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccccc
Confidence            999999 899999999999877665 789999999999999999999999999999998999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      |++||+|+++|++++|.|++++|||||+|+||+++|++......    ++..+.+.+..|++|+++|+|+|++++||+|+
T Consensus       159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~----~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~  234 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSP  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC----HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999998765432    23556677889999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 035642          240 AASYITGQVICVDGGMTV  257 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~~~  257 (367)
                      +++++||+.|.||||+..
T Consensus       235 ~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         235 AASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             hhcCCcCCEEEECcCccc
Confidence            999999999999999843

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5e-55  Score=399.55  Aligned_cols=247  Identities=32%  Similarity=0.499  Sum_probs=229.2

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|+++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56777 999999999999999999999999999999999999988888754 4778999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~as  163 (367)
                      + |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||+++|..+. .+.++..+|++|
T Consensus        81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence            9 89999999999988889999999999999999999999999999999999989999999998764 467788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+++|+++++.|++++|||||+|+||+++|++.......+.   ..+.+.+..|++|+++|+|+|++++||+|+++++
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~  236 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPE---KLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHH---HHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999999999999876654433   5667778899999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 035642          244 ITGQVICVDGGMTV  257 (367)
Q Consensus       244 itG~~i~vdgG~~~  257 (367)
                      +||+.|.||||++.
T Consensus       237 itG~~i~vDGG~ta  250 (251)
T d1vl8a_         237 VTGQIIFVDGGWTA  250 (251)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCcEEEeCcCeeC
Confidence            99999999999975

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-55  Score=400.81  Aligned_cols=245  Identities=29%  Similarity=0.452  Sum_probs=228.2

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|++++ ++|||||++|||+++|++|+++|++|++++|++++++++.++++..+.++.++.+|++|+++++++++++.++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            466777 9999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                      + |++|++|||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        85 ~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  163 (251)
T d2c07a1          85 H-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK  163 (251)
T ss_dssp             C-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             c-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHH
Confidence            9 899999999999988899999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|+|++|.|++++|||||+|+||+++|++.....     ++..+.+....|++|+++|+|+|++++||+|++++++
T Consensus       164 aal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  238 (251)
T d2c07a1         164 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-----EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYI  238 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            99999999999999999999999999999999976542     2356777888999999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 035642          245 TGQVICVDGGMT  256 (367)
Q Consensus       245 tG~~i~vdgG~~  256 (367)
                      ||+.|.||||++
T Consensus       239 tG~~i~vDGG~s  250 (251)
T d2c07a1         239 NGRVFVIDGGLS  250 (251)
T ss_dssp             CSCEEEESTTSC
T ss_pred             cCcEEEECCCcC
Confidence            999999999975

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.5e-55  Score=401.62  Aligned_cols=253  Identities=60%  Similarity=0.964  Sum_probs=203.7

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ..|++++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.++.||++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            3577888 999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +++|++|++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  161 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  161 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence            98568999999999998899999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+|++++|.|++++|||||+|+||+++|++........    ..+.+....|++|+++|+|||++++||+|+++++
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (259)
T d1xq1a_         162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE----FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred             ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH----HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999999987654322    3455667789999999999999999999999999


Q ss_pred             ccccEEEeCCCccccCCC
Q 035642          244 ITGQVICVDGGMTVNGFN  261 (367)
Q Consensus       244 itG~~i~vdgG~~~~~~~  261 (367)
                      +||+.|.||||+++.++.
T Consensus       238 iTG~~i~vDGG~s~~g~~  255 (259)
T d1xq1a_         238 ITGQTICVDGGLTVNGFS  255 (259)
T ss_dssp             CCSCEEECCCCEEETTEE
T ss_pred             CcCcEEEeCCCEECCCCC
Confidence            999999999999987653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.3e-55  Score=397.00  Aligned_cols=241  Identities=29%  Similarity=0.431  Sum_probs=226.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++.   .+..++.+|++|+++++++++++.+++ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF-   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence            4566 99999999999999999999999999999999999999888873   467889999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++|++++|.|++++|||||+|+||+++|++......     +..+.+....|++|+++|+|+|++++||+|++++++||
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-----~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG  231 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD-----DQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG  231 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-----HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh-----hHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence            9999999999999999999999999999998765432     24556778899999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      |.|.+|||+++
T Consensus       232 q~i~vdGG~~~  242 (243)
T d1q7ba_         232 ETLHVNGGMYM  242 (243)
T ss_dssp             CEEEESTTSSC
T ss_pred             CeEEECCCeEe
Confidence            99999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.1e-54  Score=397.00  Aligned_cols=246  Identities=28%  Similarity=0.455  Sum_probs=229.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.++++|++|+++++++++++.++| |++|
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD   81 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVD   81 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            489999999999999999999999999999999999999999999888899999999999999999999999999 9999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHH--HHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPL--LKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~--m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +||||||+....++.+.+.++|++++++|+.|+++++|+++|+  |.+++.|+||++||.++..+.++..+|++||+|+.
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            9999999998899999999999999999999999999999997  56667799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +|+|++|.|++++|||||+|+||+++|+|.......      ...++..+.+....|++|+++|+|+|++++||+|++++
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~  241 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA  241 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999987654221      12345677788899999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++|||.|.||||++.
T Consensus       242 ~itG~~i~vDGG~~~  256 (257)
T d2rhca1         242 AVTAQALNVCGGLGN  256 (257)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCcCceEEECcCccc
Confidence            999999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.3e-54  Score=397.27  Aligned_cols=247  Identities=29%  Similarity=0.401  Sum_probs=229.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ-TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~-~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.++.++++|++|+++++++++++.+++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5777 999999999999999999999999999999985 56788888888888899999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|.+++. ++||++||.++..+.++..+|++||
T Consensus        84 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK  162 (261)
T d1geea_          84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence             89999999999998889999999999999999999999999999999987764 5699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|++++|.|++++|||||+|+||+++|++.......+   +..+.+.+..|++|+++|+|+|++++||+|++++++
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~i  239 (261)
T d1geea_         163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP---EQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV  239 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH---HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999976543332   355667788999999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      |||.|.||||++++
T Consensus       240 tG~~i~vDGG~sl~  253 (261)
T d1geea_         240 TGITLFADGGMTLY  253 (261)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCCeEEECCCeeCC
Confidence            99999999999986

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.6e-54  Score=394.89  Aligned_cols=247  Identities=26%  Similarity=0.351  Sum_probs=227.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.+++||++|+++++++++++.++| |++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCc
Confidence            3588999999999999999999999999999999999999999999888899999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|.++ +.++||++||.++..+.++..+|++||+|++
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            999999999988999999999999999999999999999999987655 4688999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          169 QLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       169 ~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      +|++++|.|++++|||||+|+||+++|++........      ........+.+..|++|+++|+|+|++++||+|++++
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  239 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  239 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999999999999999999999999999876542211      1123456677889999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 035642          243 YITGQVICVDGGMTV  257 (367)
Q Consensus       243 ~itG~~i~vdgG~~~  257 (367)
                      ++||+.|.||||+.+
T Consensus       240 ~itG~~i~vDGG~~~  254 (255)
T d1gega_         240 YMTGQSLLIDGGMVF  254 (255)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CccCcEEEecCCEEe
Confidence            999999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.2e-54  Score=392.55  Aligned_cols=241  Identities=27%  Similarity=0.425  Sum_probs=226.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTC-SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~-~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+||||||++|||+++|++|+++|++|+++ .|+++.++++.++++..+.++.++++|++|+++++++++++.+++ |++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            389999999999999999999999999886 567788889999998888899999999999999999999999999 899


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQ  169 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~  169 (367)
                      |+||||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            99999999999899999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh-CCCCCCccccE
Q 035642          170 LTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC-FPAASYITGQV  248 (367)
Q Consensus       170 l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~-s~~~~~itG~~  248 (367)
                      |+++++.|++++|||||+|+||+++|++.....     ++..+.+....|++|+++|+|+|++++||+ |++++++||+.
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~  235 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLG-----EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-----HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHhh-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCe
Confidence            999999999999999999999999999876542     225566778899999999999999999996 99999999999


Q ss_pred             EEeCCCccc
Q 035642          249 ICVDGGMTV  257 (367)
Q Consensus       249 i~vdgG~~~  257 (367)
                      |.+|||+++
T Consensus       236 i~vdGG~si  244 (244)
T d1edoa_         236 FTIDGGIAI  244 (244)
T ss_dssp             EEESTTTTC
T ss_pred             EEeCCCeeC
Confidence            999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.2e-54  Score=394.04  Aligned_cols=248  Identities=30%  Similarity=0.363  Sum_probs=218.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++| ++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.. .+.++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            455 99999999999999999999999999999997 4667777777754 36789999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence             8999999999999889999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-------hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-------KNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      |+++|++++|.|++++|||||+|+||+++|++.........       .....+.+....|++|+++|+|+|++++||+|
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999865432211       11123445677999999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++++|||.|.||||++.
T Consensus       241 ~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhCCCcCCEEEECcchhc
Confidence            9999999999999999875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=9.7e-54  Score=392.49  Aligned_cols=248  Identities=27%  Similarity=0.366  Sum_probs=227.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.+++||++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            456 9999999999999999999999999999999999999988887654  5578999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          82 -GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             -SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             -CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence             89999999999865 4678889999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC---ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH---DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +|+.+|++++|.|++++|||||+|+||+++|++......   .....+..+.+....|++|+++|+|+|++++||+|+++
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s  240 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999998764421   12233466777888999999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 035642          242 SYITGQVICVDGGMTV  257 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~  257 (367)
                      +++||++|.||||++.
T Consensus       241 ~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         241 SYVNATVVPIDGGQSA  256 (258)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCcCceEEcCcchhc
Confidence            9999999999999975

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1e-53  Score=390.00  Aligned_cols=243  Identities=30%  Similarity=0.319  Sum_probs=210.4

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|+.|+++|++|++++|++++  ...+.++..+.++.++.||++|+++++++++++.+++ |
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G   79 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-G   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            556 99999999999999999999999999999998753  3334455667899999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN  159 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccH
Confidence            99999999999988999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      .+|++++|.|++++|||||+|+||+++|++.........   .........|++|+++|+|+|++++||+|++++|+||+
T Consensus       160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~  236 (247)
T d2ew8a1         160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM---FDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchh---HHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            999999999999999999999999999999865433322   11112234689999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      .|.||||+..
T Consensus       237 ~i~vDGG~~~  246 (247)
T d2ew8a1         237 TLAVDGGMVR  246 (247)
T ss_dssp             EEEESSSCCC
T ss_pred             eEEECCCEec
Confidence            9999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.4e-53  Score=391.16  Aligned_cols=247  Identities=24%  Similarity=0.342  Sum_probs=225.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |.+++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++.||++|+++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            45777 9999999999999999999999999999999999999888877   6689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+ ++.|+||++||.++..+.++..+|++||
T Consensus        78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence             89999999999998889999999999999999999999999999997654 4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP------AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      +|+++|++++|.|++++|||||+|+||+++|++........      ...+..+.+....|++|+++|+|+|++++||+|
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S  236 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT  236 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999876432211      112355667788999999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 035642          239 PAASYITGQVICVDGGMTV  257 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~  257 (367)
                      ++++++||+.|.||||.++
T Consensus       237 ~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         237 PEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             chhCCccCceEEECcchhh
Confidence            9999999999999999876

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-53  Score=386.24  Aligned_cols=235  Identities=29%  Similarity=0.362  Sum_probs=221.1

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++.   .++.++++|++|+++++++++++.+++ |
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   79 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-G   79 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            566 99999999999999999999999999999999999988888773   478899999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|++|||||.....++.+.+.++|++++++|+.|+++++|++.|+|++++.|+||++||.++..+.++..+|++||+|+
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  159 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV  159 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHH
Confidence            99999999999988999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++|+|++|.|++++|||||+|+||+++|++.......          ....|++|+++|+|+|++++||+|++++++|||
T Consensus       160 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~  229 (244)
T d1nffa_         160 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGA  229 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCC
Confidence            9999999999999999999999999999997654332          245799999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      +|.||||+..
T Consensus       230 ~i~vDGG~~a  239 (244)
T d1nffa_         230 EFVVDGGTVA  239 (244)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCeec
Confidence            9999999975

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3e-53  Score=385.63  Aligned_cols=239  Identities=27%  Similarity=0.369  Sum_probs=219.6

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |++++ ++|||||++|||+++|++|+++|++|++++|+++++++..+++     +..++.||++|+++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            45666 9999999999999999999999999999999999888776654     35678999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.++|+++|| .+..+.++..+|++||+
T Consensus        76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence             8999999999999889999999999999999999999999999999999888888888877 46778889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      |+++|++++|.|++++|||||+|+||+++|++.....     ++..+.+....|++|+++|+|+|++++||+|++++++|
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  228 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP-----EKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFIT  228 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCC
Confidence            9999999999999999999999999999999976542     22556677889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.|.||||+++
T Consensus       229 G~~i~vDGG~t~  240 (242)
T d1ulsa_         229 GQVLFVDGGRTI  240 (242)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CcEEEECCCccC
Confidence            999999999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.4e-53  Score=390.51  Aligned_cols=245  Identities=27%  Similarity=0.390  Sum_probs=226.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|+.|+++|++|++++|++++++++.++++..+.++.++.||++|+++++++++++.+++ |
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            556 99999999999999999999999999999999999999999998888899999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.... .++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.++..+.++..+|++||+|
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  161 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence            99999999998754 68899999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-----------CChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-----------HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      +++|++++|.|++++|||||+|+||+|+|++.....           .....+...+.+....|++|+++|+|+|++++|
T Consensus       162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  241 (260)
T d1zema1         162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF  241 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999864321           111223456677888999999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCC
Q 035642          236 LCFPAASYITGQVICVDGG  254 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG  254 (367)
                      |+|++++++|||.|.||||
T Consensus       242 L~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         242 LLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHSGGGTTCCSCEEEESCC
T ss_pred             HhCchhcCccCCeEEeCCC
Confidence            9999999999999999998

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=4.6e-53  Score=386.51  Aligned_cols=243  Identities=27%  Similarity=0.395  Sum_probs=223.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+.++++++.+++.. +.++.++.+|++|+++++++++++.+++ |
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G   81 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-G   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            566 999999999999999999999999999999999999999888854 5589999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCC-CEEEEecCcccccCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGN-GIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~-g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      ++|+||||||.....++.+.+.++|++++++|+.|+++++++++|+|++++. |+||++||.++..+.++..+|++||+|
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaa  161 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA  161 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHH
Confidence            9999999999999899999999999999999999999999999999988775 589999999999999999999999999


Q ss_pred             HHHHHHHHHHH--hCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          167 MNQLTKHLECE--QAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       167 l~~l~~~la~e--~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +.+|++++|.|  ++++|||||+|+||+++|++........    .........|++|+++|+|+|++++||+|++++++
T Consensus       162 l~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  237 (251)
T d1zk4a1         162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE----EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA  237 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH----HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH----HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            99999999998  5688999999999999999987653322    33444567899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.||||++.
T Consensus       238 tG~~i~vDGG~ta  250 (251)
T d1zk4a1         238 TGSEFVVDGGYTA  250 (251)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECccccc
Confidence            9999999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.1e-52  Score=385.40  Aligned_cols=253  Identities=56%  Similarity=0.924  Sum_probs=230.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |+++| +||||||++|||+++|++|+++|++|++++|++++++++.+++...+..+.++.||++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            67888 99999999999999999999999999999999999999999999888899999999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      ++.+|+||||||.....++.+.+.++|++++++|+.+++++++++.|+|.+++.|+||++||.++..+.++..+|+++|+
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence            66899999999999989999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      |+++|++.+|.|++++|||||+|+||+++|++....... ....+..+.+....|++|+++|+|+|++++||+|++++++
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~i  241 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI  241 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999999999999999999998765433 2334567778888999999999999999999999999999


Q ss_pred             cccEEEeCCCccccC
Q 035642          245 TGQVICVDGGMTVNG  259 (367)
Q Consensus       245 tG~~i~vdgG~~~~~  259 (367)
                      ||+.|.||||++..+
T Consensus       242 tG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         242 TGQIIWADGGFTANG  256 (258)
T ss_dssp             CSCEEEESTTGGGCS
T ss_pred             cCcEEEeCCCeeccC
Confidence            999999999999865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.2e-53  Score=390.76  Aligned_cols=242  Identities=30%  Similarity=0.393  Sum_probs=224.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.++++|++++++++++++++.+++ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence            4566 9999999999999999999999999999999999888777665   5678999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            89999999999998899999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCC-CHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPG-EPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++|++++|.|++++|||||+|+||+++|++........     .+......|++|++ +|+|||++++||+|++++++|
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~-----~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~it  232 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ-----GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT  232 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC-----STTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH-----HHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCC
Confidence            999999999999999999999999999999886554332     22345678999997 699999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 035642          246 GQVICVDGGMTVN  258 (367)
Q Consensus       246 G~~i~vdgG~~~~  258 (367)
                      |+.|.||||++..
T Consensus       233 G~~i~vDGG~t~g  245 (254)
T d1hdca_         233 GAELAVDGGWTTG  245 (254)
T ss_dssp             SCEEEESTTTTTS
T ss_pred             CceEEeCCCccCC
Confidence            9999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.4e-53  Score=385.21  Aligned_cols=243  Identities=32%  Similarity=0.461  Sum_probs=217.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++| ++|||||++|||+++|++|+++|++|++++|+++..+ ..+++   +  ..+++||++|+++++++++++.+++ |
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~-G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---G--GAFFQVDLEDERERVRFVEEAAYAL-G   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhc-C
Confidence            456 9999999999999999999999999999999987643 34443   2  3567899999999999999999999 9


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  155 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL  155 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHH
Confidence            99999999999988999999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      ++|++++|.|++++|||||+|+||+++|++....... ....+..+.+....|++|+++|+|+|++++||+|++++++||
T Consensus       156 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG  235 (248)
T d2d1ya1         156 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG  235 (248)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence            9999999999999999999999999999987654322 222234556678899999999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 035642          247 QVICVDGGMTVN  258 (367)
Q Consensus       247 ~~i~vdgG~~~~  258 (367)
                      |.|.||||++..
T Consensus       236 ~~i~vDGG~tas  247 (248)
T d2d1ya1         236 AILPVDGGMTAS  247 (248)
T ss_dssp             CEEEESTTGGGB
T ss_pred             cEEEcCcCcccc
Confidence            999999999753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-52  Score=382.42  Aligned_cols=243  Identities=29%  Similarity=0.443  Sum_probs=219.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++| ++|||||++|||+++|+.|+++|++|++++|++++++++.+++    .+..++.||++|+++++++++++.++| 
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~-   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF-   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence            3566 9999999999999999999999999999999999888777664    467889999999999999999999999 


Q ss_pred             CCccEEEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           87 GKLNLLVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        87 g~iD~lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ .|+||++||.++..+.++..+|++||+
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa  156 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG  156 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHh
Confidence            89999999999764 4567889999999999999999999999999999865 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      |+.+|++++|.|++++|||||+|+||+++|++....... ....+..+......|++|+++|+|+|++++||+|+ ++++
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~i  235 (250)
T d1ydea1         157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC  235 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCC
Confidence            999999999999999999999999999999998765332 22234556666778999999999999999999996 8899


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.||||+++
T Consensus       236 tG~~i~vDGG~~l  248 (250)
T d1ydea1         236 TGIELLVTGGAEL  248 (250)
T ss_dssp             CSCEEEESTTTTS
T ss_pred             cCCeEEECCCccc
Confidence            9999999999986

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.8e-53  Score=380.99  Aligned_cols=233  Identities=29%  Similarity=0.452  Sum_probs=207.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++++ ++|||||++|||+++|++|+++|++|++++|+.+.+           .++..+++|++|+++++++++++.+++ 
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   71 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ-   71 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc-
Confidence            4556 999999999999999999999999999999997643           356778999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|++||+|
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  151 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG  151 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHH
Confidence            89999999999998889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +++|+++++.|++++|||||+|+||+++|++.....     +...+...+..|++|+++|+|+|++++||+|++++++||
T Consensus       152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG  226 (237)
T d1uzma1         152 VIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-----ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISG  226 (237)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-----HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999999999999999999886542     124566778899999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 035642          247 QVICVDGGMTV  257 (367)
Q Consensus       247 ~~i~vdgG~~~  257 (367)
                      +.|.+|||+++
T Consensus       227 ~~i~vdGG~~m  237 (237)
T d1uzma1         227 AVIPVDGGMGM  237 (237)
T ss_dssp             CEEEESTTTTC
T ss_pred             CeEEECCCCCC
Confidence            99999999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.4e-51  Score=380.35  Aligned_cols=248  Identities=21%  Similarity=0.284  Sum_probs=220.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++... ..+.++.||++|+++++++++++.+++ |
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH-G   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            566 9999999999999999999999999999999999999999998653 467889999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCC--CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC-ccHHHHH
Q 035642           88 KLNLLVNNAAVAVPK--EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT-PLYGPYN  164 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~--~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~-~~Y~asK  164 (367)
                      ++|++|||||+....  .+.+.+.++|++++++|+.|+++++|+++|+|.+++.|+||++||.++..+.++. .+|++||
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhH
Confidence            999999999987554  4678899999999999999999999999999999889999999999998876664 4899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|++++|.|++++|||||+|+||+++|++.....................|.+|+++|+|||++++||+|++++++
T Consensus       162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  241 (268)
T d2bgka1         162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV  241 (268)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCc
Confidence            99999999999999999999999999999999987665443321111122334688999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 035642          245 TGQVICVDGGMTVN  258 (367)
Q Consensus       245 tG~~i~vdgG~~~~  258 (367)
                      |||.|.||||++..
T Consensus       242 tGq~i~VDGG~t~~  255 (268)
T d2bgka1         242 SGLNLVIDGGYTRT  255 (268)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCceEEECcCcccC
Confidence            99999999999875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1e-52  Score=384.58  Aligned_cols=246  Identities=26%  Similarity=0.293  Sum_probs=223.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.+..++++|++|+++++++++++.+++ |
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g   79 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-G   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            556 9999999999999999999999999999999999999888887   5678899999999999999999999999 9


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||+..+.++.+.+.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++..+|++||+|+
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHH
Confidence            99999999999988899999999999999999999999999999999755 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC--CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          168 NQLTKHLECEQAK--DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       168 ~~l~~~la~e~~~--~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      .+|++++|.|+++  +|||||+|+||+++|++.....+.....+.........|++|+++|+|+|++++||+|++++++|
T Consensus       159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~it  238 (253)
T d1hxha_         159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS  238 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCc
Confidence            9999999999986  46999999999999999876544443333444445567889999999999999999999999999


Q ss_pred             ccEEEeCCCccccC
Q 035642          246 GQVICVDGGMTVNG  259 (367)
Q Consensus       246 G~~i~vdgG~~~~~  259 (367)
                      ||.|.||||+...+
T Consensus       239 G~~i~VDGG~~~~g  252 (253)
T d1hxha_         239 GSELHADNSILGMG  252 (253)
T ss_dssp             SCEEEESSSCTTTT
T ss_pred             CcEEEECccHhhCc
Confidence            99999999987543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-52  Score=377.79  Aligned_cols=239  Identities=28%  Similarity=0.390  Sum_probs=217.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |+++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++    ..+.++.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence            56787 9999999999999999999999999999999999888877765    356788999999999887765    45


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||+....++.+.+.++|++++++|+.|+++++|++.|+|. ++..|+||++||.++..+.++..+|++||
T Consensus        73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence             8999999999999889999999999999999999999999999999764 45679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.......+.   ..+.+....|++|+++|+|+|++++||+|++++++
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~i  228 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE---FARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST  228 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHH---HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999999999999999999999877655433   56677788999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      |||.|.||||+..
T Consensus       229 tG~~i~vDGG~~a  241 (242)
T d1cyda_         229 SGGGILVDAGYLA  241 (242)
T ss_dssp             CSSEEEESTTGGG
T ss_pred             CCceEEeCcchhc
Confidence            9999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-52  Score=377.24  Aligned_cols=239  Identities=29%  Similarity=0.407  Sum_probs=217.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +.++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+..+.+|++|+++++++++    ++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence            45777 99999999999999999999999999999999999888877653    46788899999999887765    45


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHH-HcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL-KASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m-~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                       |++|+||||||.....++.+.+.++|++++++|+.++++++++++|+| ++++.|+||++||.++..+.++..+|++||
T Consensus        75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  153 (244)
T d1pr9a_          75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence             899999999999998999999999999999999999999999999965 455679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYI  244 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~i  244 (367)
                      +|+++|++++|.|++++|||||+|+||+++|++.........   ..+.+....|++|+++|+|+|++++||+|++++++
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~---~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~i  230 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMT  230 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH---HHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence            999999999999999999999999999999999876654433   55667788999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 035642          245 TGQVICVDGGMTV  257 (367)
Q Consensus       245 tG~~i~vdgG~~~  257 (367)
                      ||+.|.||||++.
T Consensus       231 tG~~i~vDGG~~A  243 (244)
T d1pr9a_         231 TGSTLPVEGGFWA  243 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCcEEEECccHhh
Confidence            9999999999863

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.8e-51  Score=377.93  Aligned_cols=248  Identities=27%  Similarity=0.373  Sum_probs=224.3

Q ss_pred             CCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            5 VWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      +.|++++ ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.||++|+++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3467888 999999999999999999999999999999999998888887754 47789999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCccccc-------CC
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVT-------AA  154 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~-------~~  154 (367)
                      +++ |++|++|||||+....++.+.+.++|++++++|+.|++++++++.|+|. +...|+|++++|.....       +.
T Consensus        83 ~~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          83 ADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            999 9999999999999889999999999999999999999999999999985 45577888888876654       33


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA  234 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~  234 (367)
                      ++..+|++||+|+.+|+|++|.|++++|||||+|+||+++|++.....     ++..+.+....|++|+++|+|+|++++
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~pl~R~g~pedvA~~v~  236 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-----KKIRDHQASNIPLNRFAQPEEMTGQAI  236 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-----HHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            567899999999999999999999999999999999999999986542     235566778899999999999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcccc
Q 035642          235 FLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       235 ~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ||+|++++++||+.|.||||+.++
T Consensus       237 fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHhcchhCCCcCceEEECCCeecC
Confidence            999999999999999999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.9e-51  Score=378.68  Aligned_cols=247  Identities=31%  Similarity=0.474  Sum_probs=208.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++...+   .++.++.+|++++++++++++++.++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            556 99999999999999999999999999999999999999999987653   36999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc-ccccCCCCCcc
Q 035642           85 FQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV-AGVTAAPLTPL  159 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~-~~~~~~~~~~~  159 (367)
                      + |++|++|||||...+    .++.+.+.|+|++++++|+.|+++++|+++|+|++++ |++|+++|. ++..+.++..+
T Consensus        83 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          83 F-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             H-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             h-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence            9 999999999998643    3455678999999999999999999999999998765 556655554 56788999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh----hhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |++||+|+++|++++|.|++++|||||+|+||+++|++.........    .......+....|++|+++|+|+|++++|
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  240 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998765432221    12344566778999999999999999999


Q ss_pred             HhCCC-CCCccccEEEeCCCccc
Q 035642          236 LCFPA-ASYITGQVICVDGGMTV  257 (367)
Q Consensus       236 L~s~~-~~~itG~~i~vdgG~~~  257 (367)
                      |+|++ ++|+||+.|.||||+++
T Consensus       241 L~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         241 LADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HhCCcccCCccCceEEeCCChhh
Confidence            99954 89999999999999986

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2e-51  Score=380.02  Aligned_cols=249  Identities=28%  Similarity=0.431  Sum_probs=219.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.+++||++|+++++++++++.++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            556 99999999999999999999999999999999999999999997653   46899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCc----cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           85 FQGKLNLLVNNAAVAVPKEA----LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~----~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      + |++|++|||||...+.++    .+.+.+.|++++++|+.|+++++|+++|+|++++++.|+++||.++..+.++..+|
T Consensus        83 ~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          83 F-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             H-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             h-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            9 999999999999766544    45678899999999999999999999999987655555555556778899999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhh----HHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN----KIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ++||+|+.+|++++|.|++++|||||+|+||+|+|++...........    +.........|++|+++|+|+|++++||
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL  241 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999987665443322    2334455678999999999999999999


Q ss_pred             hCCC-CCCccccEEEeCCCcccc
Q 035642          237 CFPA-ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       237 ~s~~-~~~itG~~i~vdgG~~~~  258 (367)
                      +|++ +.|+|||.|.||||+++.
T Consensus       242 ~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         242 ADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hCcchhCCccCeEEEeCcCHHHh
Confidence            9975 579999999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.8e-51  Score=379.38  Aligned_cols=249  Identities=27%  Similarity=0.419  Sum_probs=223.9

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.++.+|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            566 99999999999999999999999999999999999999999998754   36899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCC--CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           85 FQGKLNLLVNNAAVAVPK--EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~--~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      | |++|++|||||.....  ...+.+.++|++++++|+.|+++++|+++|+|++++.|+|+++||.++..+.++..+|++
T Consensus        82 ~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          82 F-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             H-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             c-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            9 8999999999976443  445668899999999999999999999999999988899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhh----HHHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKN----KIVEGLVSRTPICRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s  238 (367)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|++...........    +.........|++|+++|+|||++++||+|
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S  240 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999887654433222    233344566899999999999999999999


Q ss_pred             C-CCCCccccEEEeCCCcccc
Q 035642          239 P-AASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~-~~~~itG~~i~vdgG~~~~  258 (367)
                      + .++|+||+.|.||||+++.
T Consensus       241 ~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         241 RNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HHHHTTCCSCEEEESTTGGGC
T ss_pred             CccccCccCcEEEeCcCHHHh
Confidence            5 6899999999999999875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-51  Score=381.34  Aligned_cols=250  Identities=32%  Similarity=0.423  Sum_probs=227.0

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-----KGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-----~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++| ++|||||++|||+++|++|+++|++|++++|+.+++++..+++..     .+.++.++.||++|+++++++++++.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            566 999999999999999999999999999999999999999988864     25689999999999999999999999


Q ss_pred             HHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHH
Q 035642           83 SIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGP  162 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~a  162 (367)
                      +++ |++|+||||||.....++.+.+.++|++++++|+.|+++++|+++|+|.+++.|+||++|| ++..+.++...|++
T Consensus        90 ~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~a  167 (297)
T d1yxma1          90 DTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGA  167 (297)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHH
T ss_pred             HHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccchh
Confidence            999 8999999999998888999999999999999999999999999999999988899999866 45567888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          163 YNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       163 sKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ||+|+++|+|++|.|++++|||||+|+||+|.|++....... ..++..+......|++|+++|+|||++++||+|++++
T Consensus       168 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~  246 (297)
T d1yxma1         168 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS  246 (297)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999987543322 1223456667789999999999999999999999999


Q ss_pred             CccccEEEeCCCccccCCC
Q 035642          243 YITGQVICVDGGMTVNGFN  261 (367)
Q Consensus       243 ~itG~~i~vdgG~~~~~~~  261 (367)
                      ++||++|.||||++++...
T Consensus       247 ~iTG~~i~VDGG~sl~~~~  265 (297)
T d1yxma1         247 FITGQSVDVDGGRSLYTHS  265 (297)
T ss_dssp             TCCSCEEEESTTGGGCBTT
T ss_pred             CcCCcEEEeCcChhhhcCC
Confidence            9999999999999987443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.3e-51  Score=377.28  Aligned_cols=241  Identities=21%  Similarity=0.205  Sum_probs=218.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.+....      +..+|++++++++++++++.++| |++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence            799999999999999999999999999999999888776554332      23589999999999999999999 99999


Q ss_pred             EEEcCCCCC-CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHHHH
Q 035642           92 LVNNAAVAV-PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQL  170 (367)
Q Consensus        92 lI~~Ag~~~-~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l  170 (367)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            999999864 4688899999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEecCcccCCccccccCCh---hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          171 TKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP---AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       171 ~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      +|++|.|++++|||||+|+||+++|++........   ..++..+.+.+..|++|+++|+|||++++||+|++++|+|||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999876543321   123466777888999999999999999999999999999999


Q ss_pred             EEEeCCCccccC
Q 035642          248 VICVDGGMTVNG  259 (367)
Q Consensus       248 ~i~vdgG~~~~~  259 (367)
                      .|.||||+++..
T Consensus       235 ~i~vdGG~~~~~  246 (252)
T d1zmta1         235 VFWLAGGFPMIE  246 (252)
T ss_dssp             EEEESTTCCCCC
T ss_pred             eEEECCCceeCC
Confidence            999999998753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.7e-50  Score=374.45  Aligned_cols=251  Identities=27%  Similarity=0.353  Sum_probs=219.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |+++| ++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++..+.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            45777 9999999999999999999999999999999999888877765   5689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCC-----ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           86 QGKLNLLVNNAAVAVPKE-----ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~-----~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                       |++|++|||||+.....     ..+.+.+.|++++++|+.|+++++|+++|+|++++ |+||+++|.++..+.++..+|
T Consensus        78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred             -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence             99999999999865432     23445678999999999999999999999998764 899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh-----hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP-----AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      ++||+|+.+|+|++|.|++++ ||||+|+||+|+|++........     ...+..+.+....|++|+++|+|+|++++|
T Consensus       156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999974 99999999999999875432211     112345667788999999999999999999


Q ss_pred             HhCC-CCCCccccEEEeCCCccccCCCCC
Q 035642          236 LCFP-AASYITGQVICVDGGMTVNGFNPT  263 (367)
Q Consensus       236 L~s~-~~~~itG~~i~vdgG~~~~~~~~~  263 (367)
                      |+|+ +++++||+.|.||||++++++...
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~g~~~~  263 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVRGFFSG  263 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGCCSSCS
T ss_pred             HcCCcccCCeeCcEEEECcChhhcceeCC
Confidence            9994 689999999999999999766544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-50  Score=370.57  Aligned_cols=249  Identities=24%  Similarity=0.276  Sum_probs=214.8

Q ss_pred             CCCCCCCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      |+.++++| ++|||||+|  |||+++|++|+++|++|++++|+++..++..+ +...+++..++++|++|++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhccCcccccccccCCHHHHHHHHHH
Confidence            56678888 999999987  99999999999999999999999765555443 444455677899999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCC
Q 035642           81 VSSIFQGKLNLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPL  156 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~  156 (367)
                      +.+++ |++|++|||||....    .++.+.+.++|+..+++|+.+++.+++++.|+|++  .|+||++||.++..+.++
T Consensus        80 ~~~~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~  156 (256)
T d1ulua_          80 VKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPK  156 (256)
T ss_dssp             HHHHH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTT
T ss_pred             HHHhc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCC
Confidence            99999 899999999998643    35677899999999999999999999999999865  489999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          157 TPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      ..+|++||+|+++|+|++|.|++++|||||+|+||+++|++........   +..+.+.+..|++|+++|+|+|++++||
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~---~~~~~~~~~~pl~R~~~pedvA~~v~fL  233 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT---KMYDRVAQTAPLRRNITQEEVGNLGLFL  233 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH---HHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH---HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999876554333   3566777889999999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCccccC
Q 035642          237 CFPAASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~~~~~  259 (367)
                      +|++++++||+.|.||||+++.+
T Consensus       234 ~S~~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         234 LSPLASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBC
T ss_pred             hCchhCCccCCeEEECcCEeCcC
Confidence            99999999999999999998753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.6e-49  Score=356.92  Aligned_cols=229  Identities=23%  Similarity=0.313  Sum_probs=213.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCE-------EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAI-------IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~-------Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      ++|||||||+|||+++|++|+++|++       |++++|+.++++++.+++...+.++.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            37999999999999999999999997       99999999999999999998888999999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                      +| |++|+||||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            99 89999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASY  243 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~  243 (367)
                      |+|+.+|+++++.|++++|||||+|+||+++|+|........              ..++.+|+|+|++++||+++.+++
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~--------------~~~~~~PedvA~~v~~l~s~~~~~  226 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRT  226 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh--------------HhcCCCHHHHHHHHHHHHcCCccC
Confidence            999999999999999999999999999999999987654332              135678999999999999988888


Q ss_pred             cccc-EEEeCCC
Q 035642          244 ITGQ-VICVDGG  254 (367)
Q Consensus       244 itG~-~i~vdgG  254 (367)
                      ++|+ .+.++||
T Consensus       227 ~~~~~~i~p~~G  238 (240)
T d2bd0a1         227 VVEEIILRPTSG  238 (240)
T ss_dssp             EEEEEEEEETTC
T ss_pred             ccCCEEEEecCC
Confidence            8877 4557776

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=6e-49  Score=360.86  Aligned_cols=245  Identities=27%  Similarity=0.395  Sum_probs=219.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCS-RNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~-R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++| +||||||++|||+++|+.|+++|++|++++ |+++.++++.++++..+.++.++.||++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            3666 999999999999999999999999999865 56666888899998888899999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~asK  164 (367)
                       |++|++|||||.....++.+.+.+.|++++++|+.++++++|+++|+|+++  |++++++|..+. .+.+++.+|++||
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHH
Confidence             899999999999988899999999999999999999999999999999654  677777776554 4688999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC--------ChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH--------DPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFL  236 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L  236 (367)
                      +|+++|+|++|.|++++|||||+|+||+++|++.+....        ....++..+.+....|++|+++|+|||++++||
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL  239 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999998654321        112234566778889999999999999999999


Q ss_pred             hCCCCCCccccEEEeCCCc
Q 035642          237 CFPAASYITGQVICVDGGM  255 (367)
Q Consensus       237 ~s~~~~~itG~~i~vdgG~  255 (367)
                      +|++++++||+.|.+|||+
T Consensus       240 ~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         240 CQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCchhcCCcCceEEeCCCC
Confidence            9999999999999999996

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.5e-49  Score=360.95  Aligned_cols=237  Identities=27%  Similarity=0.391  Sum_probs=209.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++| ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.+++||++++++++++++++.+++ |
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g   78 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-G   78 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            456 9999999999999999999999999999999998877665544   6789999999999999999999999999 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++  .+.|+++||.+. .+.++...|+++|+|+
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~-~~~~~~~~Y~~sK~al  155 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAG-LGAFGLAHYAAGKLGV  155 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTT-CCHHHHHHHHHCSSHH
T ss_pred             CccEeccccccccccchhhhhcccccccccccccccccccccccccccc--ccceeecccccc-ccccCccccchhhHHH
Confidence            9999999999988899999999999999999999999999999999854  356666666554 4557788999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++|++++|.|++++|||||+|+||+++|++.....     ++..+.+.+..|++|+++|+|||++++||+|++++++||+
T Consensus       156 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~  230 (241)
T d2a4ka1         156 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-----PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ  230 (241)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-----HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh-----HhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence            99999999999999999999999999999876432     2356667778999999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 035642          248 VICVDGGMTV  257 (367)
Q Consensus       248 ~i~vdgG~~~  257 (367)
                      +|.+|||+++
T Consensus       231 ~i~vDGG~s~  240 (241)
T d2a4ka1         231 ALYVDGGRSI  240 (241)
T ss_dssp             EEEESTTTTT
T ss_pred             eEEeCCCccc
Confidence            9999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.5e-49  Score=356.41  Aligned_cols=230  Identities=28%  Similarity=0.386  Sum_probs=205.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|++|+++|++|++++|+++.+++.       +  ..++.||+++.  +    +.+.+++ +
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~--~~~~~~Dv~~~--~----~~~~~~~-g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------G--HRYVVCDLRKD--L----DLLFEKV-K   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------C--SEEEECCTTTC--H----HHHHHHS-C
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------C--CcEEEcchHHH--H----HHHHHHh-C
Confidence            455 999999999999999999999999999999998665432       2  34577999863  3    4455566 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAM  167 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal  167 (367)
                      ++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||+++|..+..+.++...|++||+|+
T Consensus        66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            99999999999888899999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      ++|+|++|.|++++|||||+|+||+++|++.......    +..+.+.+..|++|+++|+|+|++++||+|++++++|||
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~----~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~  221 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ  221 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCc
Confidence            9999999999999999999999999999987654332    245667788999999999999999999999999999999


Q ss_pred             EEEeCCCcccc
Q 035642          248 VICVDGGMTVN  258 (367)
Q Consensus       248 ~i~vdgG~~~~  258 (367)
                      +|.||||++.+
T Consensus       222 ~i~vDGG~s~~  232 (234)
T d1o5ia_         222 TIVVDGGLSKF  232 (234)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEECcccccC
Confidence            99999999764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-49  Score=362.21  Aligned_cols=238  Identities=21%  Similarity=0.285  Sum_probs=212.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.+++ |+
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            39999999999999999999999999999999999999999888654  5689999999999999999999999999 89


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC---CCEEEEecCcccccCCCCCccHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG---NGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~---~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                      +|+||||||....        ++|++++++|+.+++++++.++|+|.+++   .|+||++||.++..+.++..+|++||+
T Consensus        83 iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  154 (254)
T d2gdza1          83 LDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH  154 (254)
T ss_dssp             CCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHH
Confidence            9999999998643        34889999999999999999999997653   489999999999999999999999999


Q ss_pred             HHHHHHHH--HHHHhCCCCeEEEEEecCcccCCccccccCChhh---hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          166 AMNQLTKH--LECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK---NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       166 al~~l~~~--la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      |+.+|+|+  |+.|++++|||||+|+||+++|+|..........   .+..+.+....|++|+++|+|+|++++||+|++
T Consensus       155 al~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  234 (254)
T d2gdza1         155 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC
Confidence            99999997  7889999999999999999999998765443221   234455667789999999999999999999864


Q ss_pred             CCCccccEEEeCCCccccC
Q 035642          241 ASYITGQVICVDGGMTVNG  259 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~~  259 (367)
                        ++||+.|.||||++++.
T Consensus       235 --~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         235 --ALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             --TCSSCEEEEETTTEEEE
T ss_pred             --CCCCCEEEECCCCeeec
Confidence              59999999999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.7e-48  Score=355.56  Aligned_cols=248  Identities=25%  Similarity=0.397  Sum_probs=219.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN-QTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~-~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+++| ++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            45777 99999999999999999999999999999876 56778888888888889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-CCCCCccHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-AAPLTPLYGPY  163 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-~~~~~~~Y~as  163 (367)
                      + |++|++|||||.....++.+.+.++|++++++|+.+++++++++.|+|.+  .|++++++|..+.. +.++...|++|
T Consensus        94 ~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~as  170 (272)
T d1g0oa_          94 F-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGS  170 (272)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             h-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHH
Confidence            9 89999999999998889999999999999999999999999999999965  47888888877654 56677889999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCCh--------hhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          164 NGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDP--------AKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      |+|+++|+|++|.|++++|||||+|+||+++|++........        .............|++|+++|+|||++++|
T Consensus       171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f  250 (272)
T d1g0oa_         171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999875432211        111122345678999999999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCccc
Q 035642          236 LCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+|++++++||+.|.||||+.+
T Consensus       251 L~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         251 LASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.6e-47  Score=357.54  Aligned_cols=252  Identities=24%  Similarity=0.310  Sum_probs=223.6

Q ss_pred             CCCCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            4 YVWWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         4 ~~~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      |+.++++| ++||||||+|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++++++++++++.+
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            44568888 999999999999999999999999999999999999988888764 3778999999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHH-cCCCCEEEEecCcccccCCCCCccH
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLK-ASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~-~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      .+++ +++|++|||||.....++.+.+.++|+.++.+|+.+.+.+.+...+.+. ....+.+++++|.++..+.++..+|
T Consensus        98 ~~~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Y  176 (294)
T d1w6ua_          98 IKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  176 (294)
T ss_dssp             HHHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             hhhc-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchH
Confidence            9999 8999999999999888889999999999999999999999888766654 4557789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++|+|++|.|++++|||||+|+||+++|++........  .+..+...+..|++|+++|+|+|+++.||+|++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~  254 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT--GTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY  254 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT--SHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCc--HHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999876644322  235677788899999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccc
Q 035642          241 ASYITGQVICVDGGMTVN  258 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~  258 (367)
                      ++++||++|.||||+++.
T Consensus       255 s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         255 ASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             GTTCCSCEEEESTTHHHH
T ss_pred             hcCCCCcEEEECCChhhe
Confidence            999999999999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-48  Score=353.93  Aligned_cols=239  Identities=22%  Similarity=0.315  Sum_probs=211.8

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +++ ++|||||++|||+++|+.|+++|++|++++|++++++++.+     ...+....+|+.+.+.++...+.    + +
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~----~-~   73 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFANE----V-E   73 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHHHH----C-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccccccc----c-c
Confidence            566 99999999999999999999999999999999887765433     23577788899988777666554    4 8


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccc-cCCCCCccHHHHHHH
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGV-TAAPLTPLYGPYNGA  166 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~-~~~~~~~~Y~asKaa  166 (367)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++.|+||++||.++. .+.++..+|+++|+|
T Consensus        74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa  153 (245)
T d2ag5a1          74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (245)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHH
Confidence            8999999999999889999999999999999999999999999999999889999999998775 577888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYIT  245 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~it  245 (367)
                      +++|+|++|.|++++|||||+|+||+++|++....... .......+.+....|++|+++|+|+|+++.||+|++++++|
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iT  233 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT  233 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence            99999999999999999999999999999987654322 22234566778889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 035642          246 GQVICVDGGMTV  257 (367)
Q Consensus       246 G~~i~vdgG~~~  257 (367)
                      |+.|.||||+++
T Consensus       234 G~~i~VDGG~sl  245 (245)
T d2ag5a1         234 GNPVIIDGGWSL  245 (245)
T ss_dssp             SCEEEECTTGGG
T ss_pred             CceEEeCCCcCC
Confidence            999999999975

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-47  Score=346.79  Aligned_cols=240  Identities=24%  Similarity=0.329  Sum_probs=212.5

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||++|||+++|+.|+++|++|++++|++++++++.++++..+  .++.+++||++++++++++++++.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            555 99999999999999999999999999999999999999999998764  578999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccCC--CCCccHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTAA--PLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~~--~~~~~Y~  161 (367)
                       |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++  .|+||++||.++....  ++...|+
T Consensus        88 -g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~  166 (257)
T d1xg5a_          88 -SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  166 (257)
T ss_dssp             -CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             -CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHH
Confidence             8999999999999889999999999999999999999999999999987654  6999999999987554  4566799


Q ss_pred             HHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Q 035642          162 PYNGAMNQLTKHLECEQ--AKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       162 asKaal~~l~~~la~e~--~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~  239 (367)
                      +||+|+.+|+++++.|+  +++||+||+|+||++.|++........     .+......|.+|+++|+|||++++||+|+
T Consensus       167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~-----~~~~~~~~~~~r~~~pedvA~~v~fL~s~  241 (257)
T d1xg5a_         167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-----PEKAAATYEQMKCLKPEDVAEAVIYVLST  241 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-----HHHHHHHHC---CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh-----HHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999998  788999999999999999877654332     23445567999999999999999999999


Q ss_pred             CCCCccccEEEeCCC
Q 035642          240 AASYITGQVICVDGG  254 (367)
Q Consensus       240 ~~~~itG~~i~vdgG  254 (367)
                      +++++|||++.-++|
T Consensus       242 ~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         242 PAHIQIGDIQMRPTG  256 (257)
T ss_dssp             CTTEEEEEEEEEETT
T ss_pred             hhcCeECCEEEEeCC
Confidence            999999997444444

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.5e-47  Score=355.29  Aligned_cols=233  Identities=22%  Similarity=0.320  Sum_probs=207.3

Q ss_pred             CCCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC---------hhHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Q 035642            6 WWSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN---------QTELNERLQEWKLKGLKVTGSVCDLSSREQRE   75 (367)
Q Consensus         6 ~~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~---------~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~   75 (367)
                      +|+++| ++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++...+.   ...+|++|.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHHH
Confidence            567888 99999999999999999999999999998654         4567777777765443   4567999999999


Q ss_pred             HHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC
Q 035642           76 KLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP  155 (367)
Q Consensus        76 ~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~  155 (367)
                      ++++++.+++ |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.+
T Consensus        79 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          79 KLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            9999999999 999999999999999999999999999999999999999999999999998899999999999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          156 LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                      +..+|++||+|+.+|+++++.|++++|||||+|+||++.|++......  .   .          .+..+|+|+|++++|
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~--~---~----------~~~~~PedvA~~v~f  222 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE--D---L----------VEALKPEYVAPLVLW  222 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH--H---H----------HHHSCGGGTHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH--h---h----------HhcCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999998876543221  1   1          123479999999999


Q ss_pred             HhCCCCCCccccEEEeCCCcccc
Q 035642          236 LCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      |+|+.+ ++||+.|.+|||+...
T Consensus       223 L~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         223 LCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             HTSTTC-CCCSCEEEEETTEEEE
T ss_pred             HcCCCc-CCCCcEEEeCCCceeE
Confidence            999765 7899999999998765

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-45  Score=334.44  Aligned_cols=241  Identities=20%  Similarity=0.200  Sum_probs=210.5

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAG---FGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~---~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .++| ++||||||+|||+++|++|++   +|++|++++|++++++++.+++...  +.++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3567 999999999999999999986   7999999999999999999998764  558999999999999999999988


Q ss_pred             HHHc---CCCccEEEEcCCCCC---CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC--CCEEEEecCcccccC
Q 035642           82 SSIF---QGKLNLLVNNAAVAV---PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG--NGIIVFISSVAGVTA  153 (367)
Q Consensus        82 ~~~~---~g~iD~lI~~Ag~~~---~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~--~g~IV~iSS~~~~~~  153 (367)
                      .+..   ++.+|++|||||...   ..++.+.+.++|++++++|+.|+++++++++|+|++++  .|+||++||.++..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            7631   257999999999864   34577889999999999999999999999999998765  589999999999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHH
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLV  233 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai  233 (367)
                      .+++.+|++||+|+++|+++|+.|  ++|||||+|+||+|.|+|..........++..+.+....|.+|+++|+|+|+++
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999  569999999999999998765433222234556666677889999999999999


Q ss_pred             HHHhCCCCCCccccEEEe
Q 035642          234 AFLCFPAASYITGQVICV  251 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~v  251 (367)
                      ++|+++ ++++||+.|.|
T Consensus       241 ~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHH-CCSCTTEEEET
T ss_pred             HHHhhh-ccCCCCCeEEe
Confidence            999975 57999999875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3e-43  Score=326.20  Aligned_cols=239  Identities=24%  Similarity=0.303  Sum_probs=199.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCcEEEE-----------------EccCCCHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSR-NQTELNERLQEWKLK-GLKVTGS-----------------VCDLSSRE   72 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R-~~~~~~~~~~~l~~~-~~~~~~~-----------------~~Dlsd~~   72 (367)
                      ++|||||++|||+++|++|+++|++|++++| +.+.++++.+++... +.....+                 .+|+++++
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            7999999999999999999999999998766 456677777777653 3344444                 45699999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHH--------------HhHHHhhHHHHHHHHHHHHHHH---
Q 035642           73 QREKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMS--------------TLRSTNFESVFHLSKLAHPLLK---  135 (367)
Q Consensus        73 sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~--------------~~~~vNv~g~~~l~~~~~~~m~---  135 (367)
                      +++++++++.+++ |++|+||||||...+.++.+.+.++|+              .++.+|+.+++++.+.+.+.+.   
T Consensus        84 ~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          84 RCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            9999999999999 899999999999888777766665554              4789999999999999887653   


Q ss_pred             ---cCCCCEEEEecCcccccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHH
Q 035642          136 ---ASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVE  212 (367)
Q Consensus       136 ---~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~  212 (367)
                         +.+.++||+++|..+..+.++..+|++||+|+++|++++|.|++++|||||+|+||++.+...  .     .++..+
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~-----~~~~~~  235 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--M-----PPAVWE  235 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--S-----CHHHHH
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--C-----CHHHHH
Confidence               345689999999999999999999999999999999999999999999999999998655321  1     122556


Q ss_pred             HHhhcCCC-CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          213 GLVSRTPI-CRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       213 ~~~~~~p~-~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ......|+ +|+++|+|+|++++||+|++++|+||+.|.||||+++.
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            66777885 99999999999999999999999999999999999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-43  Score=318.38  Aligned_cols=233  Identities=25%  Similarity=0.359  Sum_probs=202.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +++| ++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.+.....+|+.+.+.+++.++.+...+ 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-
Confidence            4677 9999999999999999999999999999999999998888877   5578888999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCC------CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC------CCCEEEEecCcccccCC
Q 035642           87 GKLNLLVNNAAVAVP------KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS------GNGIIVFISSVAGVTAA  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~------~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~------~~g~IV~iSS~~~~~~~  154 (367)
                      +.+|.+++|+++...      .+..+.+.+.|++++++|+.+++++++++.|+|..+      +.|+||++||.++..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            889999999887543      345567889999999999999999999999998643      56899999999999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHH
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLV  233 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai  233 (367)
                      ++..+|++||+|+++|+++++.|++++|||||+|+||+++|++.......     ..+.+....|+ +|+++|+|||+++
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-----HHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999998765332     33455567786 8999999999999


Q ss_pred             HHHhCCCCCCccccEEEe
Q 035642          234 AFLCFPAASYITGQVICV  251 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~v  251 (367)
                      +||++  ++|+|||+|.|
T Consensus       233 ~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         233 QAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHH--CTTCCSCEEEE
T ss_pred             HHHHh--CCCCCceEeEC
Confidence            99995  68999999976

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.4e-44  Score=327.18  Aligned_cols=236  Identities=17%  Similarity=0.176  Sum_probs=197.3

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCC-CHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLS-SREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dls-d~~sv~~~~~~~~~   83 (367)
                      |++++ +||||||++|||+++|++|+++|++|++++|+.++.+++.+..... +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            56777 9999999999999999999999999999988877766554433332 457899999998 67889999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC---CCCEEEEecCcccccCCCCCccH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS---GNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~---~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      ++ |++|+||||||..        +.+.|++++++|+.|+++++++++|+|.++   ..|+||++||.++..+.+++.+|
T Consensus        81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            99 8999999999964        456789999999999999999999999764   36899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+.........+....   .....+..+||++|++++++.+  
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~---~~~~~~~~~~e~va~~~~~~~~--  226 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE---LLLSHPTQTSEQCGQNFVKAIE--  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH---HHTTSCCEEHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHh---ccccCCCCCHHHHHHHHHHhhh--
Confidence            99999999999999999999999999999999999987665433222112211   1122345689999999988873  


Q ss_pred             CCCccccEEEeCCCccc
Q 035642          241 ASYITGQVICVDGGMTV  257 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~  257 (367)
                       ...||+.+.+|||...
T Consensus       227 -~~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         227 -ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             -HCCTTCEEEEETTEEE
T ss_pred             -CCCCCCEEEECCCEeC
Confidence             2359999999999743

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.2e-43  Score=321.14  Aligned_cols=245  Identities=19%  Similarity=0.275  Sum_probs=213.9

Q ss_pred             CCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++| ++|||||+|  |||+++|+.|+++|++|++++|+++..+.+ +++....+....+.+|+++..++...++++.+.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            455 999999999  899999999999999999999997655544 4444445566778889999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCc-----cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           86 QGKLNLLVNNAAVAVPKEA-----LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~-----~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                       +++|++||||+.......     .....+.|...+++|+.+.+.+++.+.++|++  ++.||++||..+..+.++...|
T Consensus        82 -~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y  158 (258)
T d1qsga_          82 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  158 (258)
T ss_dssp             -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred             -cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHH
Confidence             899999999998654333     34567889999999999999999999998854  4789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      ++||+|+++|++++|.|++++|||||+|+||+++|++........   ...+......|++|+++|||+|+++.||+|++
T Consensus       159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~  235 (258)
T d1qsga_         159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR---KMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhh---hHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999876543332   25566778899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccccCC
Q 035642          241 ASYITGQVICVDGGMTVNGF  260 (367)
Q Consensus       241 ~~~itG~~i~vdgG~~~~~~  260 (367)
                      ++++||+.+.||||+++.+.
T Consensus       236 s~~itG~~i~vDGG~~i~g~  255 (258)
T d1qsga_         236 SAGISGEVVHVDGGFSIAAM  255 (258)
T ss_dssp             GTTCCSCEEEESTTGGGBCS
T ss_pred             hcCccCceEEECcCHHHhcC
Confidence            99999999999999998754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=322.23  Aligned_cols=215  Identities=25%  Similarity=0.276  Sum_probs=197.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .+++| ++||||||+|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.||++|+++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45777 99999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                       |++|++|||||.....++.+.+.+.|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+++++|++||+
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  161 (244)
T d1yb1a_          83 -GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  161 (244)
T ss_dssp             -CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             -CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence             8999999999999888888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC---CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          166 AMNQLTKHLECEQAK---DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       166 al~~l~~~la~e~~~---~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      |+.+|+++|+.|+++   +||+||+|+||+|+|++.+...               .+..+..+|+++|+.++..+
T Consensus       162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~---------------~~~~~~~~pe~va~~i~~~~  221 (244)
T d1yb1a_         162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS---------------TSLGPTLEPEEVVNRLMHGI  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH---------------HHHCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC---------------ccccCCCCHHHHHHHHHHHH
Confidence            999999999999865   5899999999999999875321               12235568999999998866

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.7e-43  Score=331.63  Aligned_cols=248  Identities=22%  Similarity=0.204  Sum_probs=205.7

Q ss_pred             CCeEEEEc--CCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------------CCcEEEEE----------
Q 035642           10 EQNYFITG--GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK------------GLKVTGSV----------   65 (367)
Q Consensus        10 ~~~vLVTG--as~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~------------~~~~~~~~----------   65 (367)
                      ++++||||  +++|||+++|++|+++|++|++++++..............            ........          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            45999999  6689999999999999999999999876554443332211            11122332          


Q ss_pred             ----------ccCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCC--CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHH
Q 035642           66 ----------CDLSSREQREKLMETVSSIFQGKLNLLVNNAAVAVP--KEALDTTAEYMSTLRSTNFESVFHLSKLAHPL  133 (367)
Q Consensus        66 ----------~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~--~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~  133 (367)
                                +|+++.++++++++++.+.| |++|++|||||....  .++.+++.++|++++++|+.+++.++|+++|+
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      36778889999999999999 999999999998653  57888999999999999999999999999999


Q ss_pred             HHcCCCCEEEEecCcccccCCCC-CccHHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCCcccccc---------
Q 035642          134 LKASGNGIIVFISSVAGVTAAPL-TPLYGPYNGAMNQLTKHLECEQAK-DNIRANSIAPGVIRTSLSDAIR---------  202 (367)
Q Consensus       134 m~~~~~g~IV~iSS~~~~~~~~~-~~~Y~asKaal~~l~~~la~e~~~-~gIrvn~I~PG~v~t~~~~~~~---------  202 (367)
                      |++  .|+||++||.++..+.|+ ...|++||+|+++|+|++|.|+++ +|||||+|+||+|+|+......         
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~  238 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred             ccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence            954  589999999999988887 567999999999999999999986 5999999999999995433211         


Q ss_pred             -------------------------------CChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          203 -------------------------------HDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       203 -------------------------------~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                                                     .....+...+...+..|++|+++|+|||.+++||+|+.++++|||.|.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~V  318 (329)
T d1uh5a_         239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYV  318 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEE
Confidence                                           1112234566777889999999999999999999999999999999999


Q ss_pred             CCCccccCC
Q 035642          252 DGGMTVNGF  260 (367)
Q Consensus       252 dgG~~~~~~  260 (367)
                      |||+++.+.
T Consensus       319 DGG~~~~g~  327 (329)
T d1uh5a_         319 DNGLNIMFL  327 (329)
T ss_dssp             STTGGGCSS
T ss_pred             CCCcccccC
Confidence            999988654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-43  Score=323.81  Aligned_cols=228  Identities=17%  Similarity=0.201  Sum_probs=187.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEE---EEeCChhHH---HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIH---TCSRNQTEL---NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi---~~~R~~~~~---~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++|||||||+|||+++|++|+++|++|+   .+.|+.+..   .+..+++...+.++.++.||++|+++++++++++.+ 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence            4899999999999999999999998744   456665444   344444545677999999999999999999988743 


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHH
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYN  164 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asK  164 (367)
                        |.+|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asK  159 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK  159 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHH
Confidence              789999999999998999999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh----------hHHHHHH--hhcCCCCCCCCHHHHHHH
Q 035642          165 GAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK----------NKIVEGL--VSRTPICRPGEPDEVSSL  232 (367)
Q Consensus       165 aal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~----------~~~~~~~--~~~~p~~~~~~~~dvA~a  232 (367)
                      +|+++|+++|+.|++++||+||+|+||+|+|++.......+..          ....+.+  ....+.++.++|+|||++
T Consensus       160 aal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~  239 (285)
T d1jtva_         160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHH
Confidence            9999999999999999999999999999999998765433210          0111111  123455678899999999


Q ss_pred             HHHHhCCCC
Q 035642          233 VAFLCFPAA  241 (367)
Q Consensus       233 i~~L~s~~~  241 (367)
                      ++++++...
T Consensus       240 v~~~~~~~~  248 (285)
T d1jtva_         240 FLTALRAPK  248 (285)
T ss_dssp             HHHHHHCSS
T ss_pred             HHHHHhCCC
Confidence            999986543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.7e-41  Score=316.48  Aligned_cols=252  Identities=26%  Similarity=0.260  Sum_probs=204.3

Q ss_pred             CCCCCCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---------C--Cc-EEEEEcc--
Q 035642            5 VWWSNEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK---------G--LK-VTGSVCD--   67 (367)
Q Consensus         5 ~~~~~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~---------~--~~-~~~~~~D--   67 (367)
                      +.|+++| ++|||||+|  |||+++|++|+++|++|++++|+..............         +  .. -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            4578888 999999876  9999999999999999999999865443333222110         0  01 1222333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCccCCCHHHHHHhHHHhhHHHHHHH
Q 035642           68 ------------------LSSREQREKLMETVSSIFQGKLNLLVNNAAVAV--PKEALDTTAEYMSTLRSTNFESVFHLS  127 (367)
Q Consensus        68 ------------------lsd~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~--~~~~~~~~~e~~~~~~~vNv~g~~~l~  127 (367)
                                        .++..+++++++++.++| |++|+||||||...  ..++.+.+.++|++++++|+.++++++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                              345567789999999999 99999999999854  467888999999999999999999999


Q ss_pred             HHHHHHHHcCCCCEEEEecCccccc-CCCCCccHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccCCccccccCCh
Q 035642          128 KLAHPLLKASGNGIIVFISSVAGVT-AAPLTPLYGPYNGAMNQLTKHLECEQA-KDNIRANSIAPGVIRTSLSDAIRHDP  205 (367)
Q Consensus       128 ~~~~~~m~~~~~g~IV~iSS~~~~~-~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~I~PG~v~t~~~~~~~~~~  205 (367)
                      ++++++|.++  |++++++|.++.. ..+....|+++|+++..+++.++.+++ ++|||||+|+||++.|++......  
T Consensus       161 ~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~--  236 (297)
T d1d7oa_         161 SHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF--  236 (297)
T ss_dssp             HHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH--
T ss_pred             hHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccC--
Confidence            9999987654  5666666665543 456777899999999999999999996 579999999999999998765422  


Q ss_pred             hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccccCCCC
Q 035642          206 AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVNGFNP  262 (367)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~~~~~  262 (367)
                       .++..+......|++|+++|+|||++++||+|++++++|||+|.||||++..+...
T Consensus       237 -~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~  292 (297)
T d1d7oa_         237 -IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL  292 (297)
T ss_dssp             -HHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCT
T ss_pred             -CHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCC
Confidence             23366677788999999999999999999999999999999999999999876543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.9e-41  Score=305.20  Aligned_cols=228  Identities=23%  Similarity=0.311  Sum_probs=195.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|++||||||+|||+++|++|+++|++|++++|+++            +.+.....+|+++......+........  ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA--PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhccc--cc
Confidence            368999999999999999999999999999999865            2356678899999999999998887775  56


Q ss_pred             cEEEEcCCCCCC----CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHH------HcCCCCEEEEecCcccccCCCCCcc
Q 035642           90 NLLVNNAAVAVP----KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLL------KASGNGIIVFISSVAGVTAAPLTPL  159 (367)
Q Consensus        90 D~lI~~Ag~~~~----~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m------~~~~~g~IV~iSS~~~~~~~~~~~~  159 (367)
                      +.++++++....    ......+.+.|++++++|+.+++.+++.+.+.+      .+++.|+||++||.++..+.++..+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence            677777765432    334456889999999999999999999999984      4456799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhC
Q 035642          160 YGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~~L~s  238 (367)
                      |++||+|+++|++++|.|++++|||||+|+||+++|++.......     ..+......|. +|+++|+|+|++++||+|
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~R~g~pedvA~~v~fL~s  221 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-----AKASLAAQVPFPPRLGRPEEYAALVLHILE  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-----HHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh-----HHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999987654321     33344455555 999999999999999996


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 035642          239 PAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       239 ~~~~~itG~~i~vdgG~~~~  258 (367)
                        ++++||+.|.||||+++.
T Consensus       222 --~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 --NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             --CTTCCSCEEEESTTCCCC
T ss_pred             --CCCCCCCEEEECCcccCC
Confidence              579999999999999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=5.6e-41  Score=309.57  Aligned_cols=247  Identities=22%  Similarity=0.260  Sum_probs=203.5

Q ss_pred             CCC-eEEEEcCCC--hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGGTR--GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGas~--GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +++ ++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.+....++.+|++++++++++++++.+.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            455 999999875  9999999999999999999999954 444556666667777888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCC----CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHH
Q 035642           86 QGKLNLLVNNAAVAVPK----EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYG  161 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~----~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~  161 (367)
                       |++|++|||+|.....    ...+...+.+...+.++..+.....+...+.+  +..+.|+++||.+...+.+....|+
T Consensus        82 -g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~  158 (274)
T d2pd4a1          82 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMG  158 (274)
T ss_dssp             -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred             -CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhh
Confidence             8999999999986543    22334555555666666666666655555442  2345677788888788888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAA  241 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~  241 (367)
                      +||+|+++++++++.|++++|||||+|+||++.|++.......+   +.........|.+|+++|+|||++++||+|+.+
T Consensus       159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s  235 (274)
T d2pd4a1         159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR---MILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  235 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchH---HHHHHHhhhhhccCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999999999999999999999876654332   255566677899999999999999999999999


Q ss_pred             CCccccEEEeCCCccccCCCC
Q 035642          242 SYITGQVICVDGGMTVNGFNP  262 (367)
Q Consensus       242 ~~itG~~i~vdgG~~~~~~~~  262 (367)
                      +++||++|.||||+++.+...
T Consensus       236 ~~itG~~i~vDGG~~~~g~~~  256 (274)
T d2pd4a1         236 SGVSGEVHFVDAGYHVMGMGA  256 (274)
T ss_dssp             TTCCSCEEEESTTGGGBSSCC
T ss_pred             CCCcCceEEECCChhhccCCc
Confidence            999999999999999876655

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.1e-40  Score=301.96  Aligned_cols=239  Identities=25%  Similarity=0.297  Sum_probs=201.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhc-CCcEEEEEccCC----CHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLK-GLKVTGSVCDLS----SREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~-~~~~~~~~~Dls----d~~sv~~~~~~~~~~~   85 (367)
                      ++||||||+|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|+.    .++.++++++++.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999998654 56667777654 556777766554    4678888999999999


Q ss_pred             CCCccEEEEcCCCCCCCCcc-----------CCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-----CCCCEEEEecCcc
Q 035642           86 QGKLNLLVNNAAVAVPKEAL-----------DTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-----SGNGIIVFISSVA  149 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~-----------~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-----~~~g~IV~iSS~~  149 (367)
                       |++|++|||||+..+.++.           +...+.+...+..|+.+.+...+...+.+..     ...+.+++++|..
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          83 -GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             -SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             -CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence             8999999999987654432           2345667788899999999998888777643     2357899999999


Q ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCC-CCCHHH
Q 035642          150 GVTAAPLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICR-PGEPDE  228 (367)
Q Consensus       150 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~d  228 (367)
                      +..+.+++.+|++||+|++++++++|.|++++|||||+|+||+++|++...       .+..+.+.+..|++| +++|+|
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-------~~~~~~~~~~~pl~r~~~~pee  234 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-------QETQEEYRRKVPLGQSEASAAQ  234 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-------HHHHHHHHTTCTTTSCCBCHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-------HHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999999999999999999999999999999999986432       225566778889976 489999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +|++++||+|++++++||+.|.||||+++.
T Consensus       235 va~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         235 IADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            999999999999999999999999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-41  Score=310.88  Aligned_cols=216  Identities=25%  Similarity=0.325  Sum_probs=191.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-GAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|||||++|||+++|++|+++ |++|++++|+.++++++.++++..+.++.++.||++|.++++++++++.+++ |++|
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~iD   83 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGLD   83 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCcE
Confidence            8899999999999999999986 8999999999999999999999888899999999999999999999999999 8999


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------------  154 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------------  154 (367)
                      +||||||+....+..+.+.++|+.++++|+.|++++++.++|+|++  .|+||++||.++..+.                
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhccccc
Confidence            9999999988888888889999999999999999999999999965  4899999998764321                


Q ss_pred             -------------------------CCCccHHHHHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCCccccccCCh
Q 035642          155 -------------------------PLTPLYGPYNGAMNQLTKHLECEQAK----DNIRANSIAPGVIRTSLSDAIRHDP  205 (367)
Q Consensus       155 -------------------------~~~~~Y~asKaal~~l~~~la~e~~~----~gIrvn~I~PG~v~t~~~~~~~~~~  205 (367)
                                               .+..+|++||+++.+|++.++.++++    .||+||+|+||+|.|+|....    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~----  237 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK----  237 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT----
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc----
Confidence                                     12357999999999999999988854    489999999999999986532    


Q ss_pred             hhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh--CCCCCCccccEEE
Q 035642          206 AKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC--FPAASYITGQVIC  250 (367)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~--s~~~~~itG~~i~  250 (367)
                                      ...+|+|+|+.++|++  +++....+|+.+.
T Consensus       238 ----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         238 ----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             ----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                            1237899999999987  4566677888775

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.2e-39  Score=296.80  Aligned_cols=223  Identities=22%  Similarity=0.234  Sum_probs=183.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHH---HCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--Hc
Q 035642           11 QNYFITGGTRGIGHAIVEELA---GFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS--IF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~---~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~--~~   85 (367)
                      ++|||||||+|||+++|++|+   ++|++|++++|++++++++.+.. ..+.++.++.||++|+++++++++++.+  ++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            489999999999999999997   57999999999999888765443 4467899999999999999999998854  56


Q ss_pred             CCCccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-----------CCCEEEEecCcccccC
Q 035642           86 QGKLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-----------GNGIIVFISSVAGVTA  153 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-----------~~g~IV~iSS~~~~~~  153 (367)
                       +++|+||||||+... ..+.+.+.++|++++++|+.|+++++++++|+|+++           +.|+||++||.++...
T Consensus        82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence             789999999998655 457788999999999999999999999999999753           4689999999987653


Q ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHH
Q 035642          154 ---APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVS  230 (367)
Q Consensus       154 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  230 (367)
                         .+++.+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.....+.                    ++++.+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~--------------------~~~~~~  220 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL--------------------DVPTST  220 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB--------------------CHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC--------------------CchHHH
Confidence               456779999999999999999999999999999999999999987543211                    222323


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      +.++.++.......+|+.+.+||+.
T Consensus       221 ~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCccCCCcEEEECCeE
Confidence            3333333222344589999998864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=3.8e-39  Score=296.02  Aligned_cols=245  Identities=20%  Similarity=0.186  Sum_probs=203.1

Q ss_pred             CCC-eEEEEcC--CChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            9 NEQ-NYFITGG--TRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         9 ~~~-~vLVTGa--s~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |+| ++|||||  ++|||+++|++|+++|++|++++|+.++..+...+  ..+.+...+.||++++++++++++.+.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhcc
Confidence            445 9999994  57999999999999999999999998765432222  235677788999999999999999987765


Q ss_pred             C--CCccEEEEcCCCCC-----CCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc
Q 035642           86 Q--GKLNLLVNNAAVAV-----PKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP  158 (367)
Q Consensus        86 ~--g~iD~lI~~Ag~~~-----~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~  158 (367)
                      +  +++|++|||||...     ..++.+.+.+.|...+.+|+.+.+...+...+++.   .+.+++++|.....+.+++.
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTH
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccc
Confidence            2  57999999999753     24566788999999999999999999998877643   24566667777778889999


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-------hhHHHHHHhhcCCCCC-CCCHHHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-------KNKIVEGLVSRTPICR-PGEPDEVS  230 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~p~~~-~~~~~dvA  230 (367)
                      .|+++|+|+++++++++.|++++|||||+|+||++.|++.........       .....+......|++| +++|+|+|
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva  238 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999999998765433211       1234455667789876 99999999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          231 SLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       231 ~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      +++.||+|+.++++||++|.||||++..
T Consensus       239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         239 KTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHhCchhcCccCCEEEECcCcccc
Confidence            9999999999999999999999999764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.1e-38  Score=287.61  Aligned_cols=219  Identities=21%  Similarity=0.250  Sum_probs=178.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC-
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG-   87 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g-   87 (367)
                      ++|||||||+|||+++|++|+++|+  +|++++|+.++++++.+.   .+.++.++.||++|+++++++++++.+.+ + 
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-~~   79 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV-GS   79 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH-GG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHh-CC
Confidence            5999999999999999999999996  799999999887765432   35689999999999999999999999887 4 


Q ss_pred             -CccEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-----------CCCEEEEecCcccccCC
Q 035642           88 -KLNLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-----------GNGIIVFISSVAGVTAA  154 (367)
Q Consensus        88 -~iD~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-----------~~g~IV~iSS~~~~~~~  154 (367)
                       ++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+++           ..++++++||..+....
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             49999999998654 567788999999999999999999999999999753           24789999987765432


Q ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHH
Q 035642          155 -------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPD  227 (367)
Q Consensus       155 -------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  227 (367)
                             .+..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.....                    ..+|+
T Consensus       160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~--------------------~~~~e  219 (250)
T d1yo6a1         160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA--------------------ALTVE  219 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------H
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC--------------------CCCHH
Confidence                   234579999999999999999999999999999999999999864211                    13689


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCC
Q 035642          228 EVSSLVAFLCFPAASYITGQVICVDG  253 (367)
Q Consensus       228 dvA~ai~~L~s~~~~~itG~~i~vdg  253 (367)
                      +.|+.++..+.......+|+.+..||
T Consensus       220 ~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         220 QSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            99999988887666667898877664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-38  Score=287.08  Aligned_cols=216  Identities=15%  Similarity=0.124  Sum_probs=185.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~i   89 (367)
                      |+||||||++|||+++|++|+++|++|+++++++.+.          ......+.+|.++.++.+.+.+.+.+.++ +++
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            4999999999999999999999999999999876431          23455667788889999888888877652 369


Q ss_pred             cEEEEcCCCCCC-CCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVP-KEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~-~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |+||||||.... ....+.+.+.|++++++|+.++++++++++|+|++  +|+||++||.++..+.++..+|++||+|++
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            999999997654 34556677999999999999999999999999965  599999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 035642          169 QLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITG  246 (367)
Q Consensus       169 ~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG  246 (367)
                      +|+++++.|++  ++||+||+|+||+++|++.+...+.             .+..++.+|+++|+.+.+|+++.+.+++|
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------~~~~~~~~pe~va~~~~~l~s~~~~~i~G  217 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE-------------ADFSSWTPLEFLVETFHDWITGNKRPNSG  217 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-------------SCGGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc-------------chhhcCCCHHHHHHHHHHHhCCCccCCCC
Confidence            99999999998  5799999999999999986543322             23346678999999999999999999999


Q ss_pred             cEEEe
Q 035642          247 QVICV  251 (367)
Q Consensus       247 ~~i~v  251 (367)
                      +.+.|
T Consensus       218 ~~i~v  222 (236)
T d1dhra_         218 SLIQV  222 (236)
T ss_dssp             CEEEE
T ss_pred             CeEEE
Confidence            87765

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-37  Score=283.54  Aligned_cols=214  Identities=20%  Similarity=0.242  Sum_probs=190.7

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++| ++||||||+|||+++|++|+++|++|++++|++++++++.+++.. .+.....+.+|+++.+++...++.+.+.+ 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            566 999999999999999999999999999999999999999888654 46678899999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +.+|+++||||......+.+.+.++|++++++|+.|++.+++.++|+|+++ .|+||++||.++..+.++..+|++||+|
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa  169 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA  169 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence            899999999999888888899999999999999999999999999999754 6999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC--CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          167 MNQLTKHLECEQAK--DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       167 l~~l~~~la~e~~~--~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      +++|+++|+.|+++  .||+||+|+||+|+|++.........             .....+|+++|+.++...
T Consensus       170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~-------------~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV-------------HMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG-------------GGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc-------------cccCCCHHHHHHHHHHHh
Confidence            99999999999874  57999999999999998654322111             112347899999988765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.3e-37  Score=283.88  Aligned_cols=220  Identities=29%  Similarity=0.374  Sum_probs=169.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      |+||||||++|||+++|++|+++|++|++++|+.++                 ..+|+++.+..+....++..+..+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            489999999999999999999999999999997542                 246999999998887776665546799


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc------------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT------------------  152 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~------------------  152 (367)
                      +++||||+...       .+.+.....+|..+...+.+...+.+.....+.+.++++.....                  
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999997543       23467778999999999999999998877667777766643321                  


Q ss_pred             ---------C-CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHH-hhcCCCC
Q 035642          153 ---------A-APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGL-VSRTPIC  221 (367)
Q Consensus       153 ---------~-~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~p~~  221 (367)
                               + .++..+|++||+|+++|+|++|.|++++|||||+|+||+++|++.......+.   ..+.+ ....|++
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~Plg  214 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR---YGESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCSTT
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHH---HHHHHHhcCCCCC
Confidence                     1 12234699999999999999999999999999999999999999876543332   22222 3346999


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          222 RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       222 ~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      |+++|+|||++++||+|++++++||+.|.||||++.
T Consensus       215 R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            999999999999999999999999999999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3e-37  Score=278.56  Aligned_cols=221  Identities=16%  Similarity=0.158  Sum_probs=183.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF-QGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~-~g~i   89 (367)
                      |+||||||++|||+++|++|+++|++|++++|++++.          ........+|+.+.+......+.+.+.+ .+++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            5899999999999999999999999999999987531          2244556678888888777777666532 2789


Q ss_pred             cEEEEcCCCCCCC-CccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           90 NLLVNNAAVAVPK-EALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        90 D~lI~~Ag~~~~~-~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      |+||||||..... +..+.+.+.|+.++++|+.++++++++++|+|++  +|+||++||.++..+.+++.+|++||+|++
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH  150 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence            9999999986553 4455567889999999999999999999999965  489999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--CCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHH-HHhCCCCCCcc
Q 035642          169 QLTKHLECEQA--KDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVA-FLCFPAASYIT  245 (367)
Q Consensus       169 ~l~~~la~e~~--~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~-~L~s~~~~~it  245 (367)
                      +|+++|+.|++  +.+|+||+|+||+++|++.+...+.             .+..++.+|+++|+.++ |+.++.+++++
T Consensus       151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~-------------~~~~~~~~~~~va~~~~~~l~~~~~~~~t  217 (235)
T d1ooea_         151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN-------------ADHSSWTPLSFISEHLLKWTTETSSRPSS  217 (235)
T ss_dssp             HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT-------------CCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC-------------CccccCCCHHHHHHHHHHHhcCccccCCC
Confidence            99999999998  4689999999999999986543322             23346778999999987 56666778899


Q ss_pred             ccEEEe---CCCcc
Q 035642          246 GQVICV---DGGMT  256 (367)
Q Consensus       246 G~~i~v---dgG~~  256 (367)
                      |+.+.|   ||+..
T Consensus       218 G~~i~v~~~~g~~~  231 (235)
T d1ooea_         218 GALLKITTENGTST  231 (235)
T ss_dssp             TCEEEEEEETTEEE
T ss_pred             ceEEEEEeeCCEEE
Confidence            999998   55443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=2.1e-32  Score=249.79  Aligned_cols=229  Identities=21%  Similarity=0.205  Sum_probs=181.8

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Q 035642            5 VWWSNEQNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ---TELNERLQEWKLKGLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         5 ~~~~~~~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~---~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      ..|+..|++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...+.++.++.||++|+++++++++.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            5678888999999999999999999999999 689999974   456677777777788999999999999999999998


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccH
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLY  160 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y  160 (367)
                      +.+.  +++|.++||||.....++.+.+.++|+.++++|+.|++++.+.+    ...+.++||++||.++..+.+++.+|
T Consensus        84 i~~~--~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~Y  157 (259)
T d2fr1a1          84 IGDD--VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGY  157 (259)
T ss_dssp             SCTT--SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTT
T ss_pred             cccc--ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHH
Confidence            7654  57999999999999999999999999999999999999987764    34567899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPA  240 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~  240 (367)
                      +++|++++.|++.++.    .|+++++|+||.+.++.+....       ..+.+.. . .-...+|+++++++..++.  
T Consensus       158 aAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~-------~~~~~~~-~-G~~~~~~~~~~~~l~~~l~--  222 (259)
T d2fr1a1         158 APGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP-------VADRFRR-H-GVIEMPPETACRALQNALD--  222 (259)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCCEEEEECCBC-------------------CTT-T-TEECBCHHHHHHHHHHHHH--
T ss_pred             HHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccch-------HHHHHHh-c-CCCCCCHHHHHHHHHHHHh--
Confidence            9999999998887764    4999999999988765332111       1111110 0 0123589999999988883  


Q ss_pred             CCCccccEEEeCCC
Q 035642          241 ASYITGQVICVDGG  254 (367)
Q Consensus       241 ~~~itG~~i~vdgG  254 (367)
                      ........+.+|..
T Consensus       223 ~~~~~~~v~~~d~~  236 (259)
T d2fr1a1         223 RAEVCPIVIDVRWD  236 (259)
T ss_dssp             TTCSSCEECEECHH
T ss_pred             CCCceEEEEeCcHH
Confidence            33444555555543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.3e-21  Score=182.87  Aligned_cols=229  Identities=12%  Similarity=-0.003  Sum_probs=157.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-----ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-----~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      |+||||||||+||.+++++|+++|+.|++++|...     +.+.+..+......++.++.+|++|.+++.++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            58999999999999999999999999999999543     233333332233568999999999999999998763    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------C
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------A  154 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~  154 (367)
                        .+|+++|+|+......    +.++.+..+++|+.|+.++++++...- ..+..++|++||.+.+-.           .
T Consensus        78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              5899999999865432    223445678999999999999986542 223568999999654311           1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC----------CCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP----------ICRPG  224 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p----------~~~~~  224 (367)
                      .+...|+.||.+.|.+++.+++.+   |+++..+.|+.+.+|..............+.......+          ..-+.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence            234679999999999999999875   78999999999999854322111111122222222111          11367


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .++|+|+++..++.  ..  .|+.+++.+|...
T Consensus       228 ~v~D~~~a~~~~~~--~~--~~~~yni~sg~~~  256 (357)
T d1db3a_         228 HAKDYVKMQWMMLQ--QE--QPEDFVIATGVQY  256 (357)
T ss_dssp             EHHHHHHHHHHTTS--SS--SCCCEEECCCCCE
T ss_pred             eechHHHHHHHHHh--CC--CCCeEEECCCCce
Confidence            79999999988773  32  4677888776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.86  E-value=2e-21  Score=183.20  Aligned_cols=235  Identities=13%  Similarity=0.094  Sum_probs=166.1

Q ss_pred             CCCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Q 035642            3 SYVWWSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMET   80 (367)
Q Consensus         3 ~~~~~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~   80 (367)
                      .|..+.-.++||||||||+||.+++++|+++|++|+++.|+.++...+.+.....  ......+..|++|.+++++++  
T Consensus         4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--   81 (342)
T d1y1pa1           4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--   81 (342)
T ss_dssp             TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--
T ss_pred             CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--
Confidence            3444544459999999999999999999999999999999987766655443322  334455667999999887766  


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC-----
Q 035642           81 VSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP-----  155 (367)
Q Consensus        81 ~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~-----  155 (367)
                            ..+|+++|+|+.....    .+   ....+..|+.|+.++++++...   .+..++|++||.++.....     
T Consensus        82 ------~~~~~v~~~a~~~~~~----~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~  145 (342)
T d1y1pa1          82 ------KGAAGVAHIASVVSFS----NK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             ------TTCSEEEECCCCCSCC----SC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCC
T ss_pred             ------ccchhhhhhccccccc----cc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCC
Confidence                  4589999999975422    12   2456778999999999887542   3468999999976543211     


Q ss_pred             --------------------------CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhH
Q 035642          156 --------------------------LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNK  209 (367)
Q Consensus       156 --------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~  209 (367)
                                                ....|+.||.+.|.+++.+++..+. ++++.+++|+.+.+|.............
T Consensus       146 ~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~~i~p~~v~Gp~~~~~~~~~~~~~  224 (342)
T d1y1pa1         146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSG  224 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHH
T ss_pred             ccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-ccccceecccceeCCCCCccccccchHH
Confidence                                      1135999999999999999988754 7999999999998875443222222222


Q ss_pred             HHHHHhhc--------CCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcccc
Q 035642          210 IVEGLVSR--------TPICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTVN  258 (367)
Q Consensus       210 ~~~~~~~~--------~p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~~  258 (367)
                      ....+...        .+...+.+++|+|++++.++  +.....|+.+...++....
T Consensus       225 ~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l--~~~~~~g~~~~~~~~~~t~  279 (342)
T d1y1pa1         225 WMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCL--VLPQIERRRVYGTAGTFDW  279 (342)
T ss_dssp             HHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHH--HCTTCCSCEEEECCEEECH
T ss_pred             HHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhh--cCccccceEEEEcCCceEH
Confidence            33333222        12223678999999988777  4455678887766654443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=9e-19  Score=164.42  Aligned_cols=230  Identities=12%  Similarity=0.038  Sum_probs=158.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+|+||+++++.|+++|++|++++|............. ....++.++++|++|.+.+.++++.      .++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc------cCCC
Confidence            59999999999999999999999999999874322111111111 1245788999999999999998875      4699


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------CCCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------PLTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------~~~~  158 (367)
                      +|||+|+.....    .+.++.+..+++|+.|+.++++++...    +..++|++||.+.+.+.            ....
T Consensus        76 ~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~  147 (338)
T d1udca_          76 TVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred             EEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCCcc
Confidence            999999964321    133445688999999999999988654    45789999997765322            2355


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-------ChhhhHHHHHHhhc-CC-----------
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-------DPAKNKIVEGLVSR-TP-----------  219 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~p-----------  219 (367)
                      .|+.+|.+.+.+++....+.  .++.+..+.|+.+.++.......       ..-........... .+           
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~  225 (338)
T d1udca_         148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred             hHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence            79999999999999888774  37899999999988875432111       00111122212111 11           


Q ss_pred             ----CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          220 ----ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       220 ----~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                          .+.+..++|++.++..+.........++.+++.++...
T Consensus       226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             CCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence                11245789999877765532233446788888876543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.79  E-value=7.5e-18  Score=161.14  Aligned_cols=225  Identities=12%  Similarity=0.096  Sum_probs=155.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh----------------HHHHHHHHHHh-cCCcEEEEEccCCCHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT----------------ELNERLQEWKL-KGLKVTGSVCDLSSREQR   74 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~----------------~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv   74 (367)
                      +||||||||+||.+++++|+++|++|+++|.-..                ........... .+.++.++.+|++|.+.+
T Consensus         3 kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l   82 (393)
T d1i24a_           3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFL   82 (393)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHH
Confidence            7999999999999999999999999999872111                11111122211 256789999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-
Q 035642           75 EKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-  153 (367)
Q Consensus        75 ~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-  153 (367)
                      +++++..      ++|+|+|.|+..... ....+.+.....+.+|+.|+.++++++..+   ....++++.||...... 
T Consensus        83 ~~~~~~~------~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~~~  152 (393)
T d1i24a_          83 AESFKSF------EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYGTP  152 (393)
T ss_dssp             HHHHHHH------CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGCCC
T ss_pred             HHHHHhh------cchheeccccccccc-cccccccccccccccccccccHHHHHHHHh---ccccceeecccccccccc
Confidence            9998753      689999999975331 122355667788899999999999988654   23356777777654321 


Q ss_pred             -----------------------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC------
Q 035642          154 -----------------------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD------  204 (367)
Q Consensus       154 -----------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~------  204 (367)
                                             ......|+.||.+.|.+++.++.+.   ++++..+.|+.+.++........      
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~~~~~~~~~~~~~  229 (393)
T d1i24a_         153 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEELRNR  229 (393)
T ss_dssp             SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             ccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCccccccccccccc
Confidence                                   1223469999999999999988775   78999999999988753221110      


Q ss_pred             --------hhhhHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 035642          205 --------PAKNKIVEGLVSRTPI---------CRPGEPDEVSSLVAFLCFPAASYITGQVICV  251 (367)
Q Consensus       205 --------~~~~~~~~~~~~~~p~---------~~~~~~~dvA~ai~~L~s~~~~~itG~~i~v  251 (367)
                              ..............|+         +-+..++|+++++..++  +.....|+...+
T Consensus       230 ~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~--~~~~~~g~~~~~  291 (393)
T d1i24a_         230 LDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAI--ANPAKAGEFRVF  291 (393)
T ss_dssp             CCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH--HSCCCTTCEEEE
T ss_pred             cccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHH--Hhhcccceeeee
Confidence                    0111223333333222         12456999999999988  444446665444

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.78  E-value=3.3e-19  Score=169.25  Aligned_cols=226  Identities=12%  Similarity=0.070  Sum_probs=160.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEE-EEeCChhHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIH-TCSRNQTEL-NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi-~~~R~~~~~-~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||||+||++++++|+++|+.|+ ++++..... ....+.+. ...++.++.+|++|.+++.++++..      .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~------~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQY------QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhC------CC
Confidence            599999999999999999999999754 454422111 01111111 1357899999999999999988753      68


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-----CCCEEEEecCcccccC-----------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-----GNGIIVFISSVAGVTA-----------  153 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-----~~g~IV~iSS~~~~~~-----------  153 (367)
                      |+|||+|+......    +.++....+++|+.|+.++++++.......     +..++|++||.+.+..           
T Consensus        75 d~VihlAa~~~~~~----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          75 DAVMHLAAESHVDR----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             SEEEECCSCCCHHH----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CEEEECccccchhh----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            99999999653211    233446788999999999999998765432     2468999999775521           


Q ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC---
Q 035642          154 ----------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI---  220 (367)
Q Consensus       154 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~---  220 (367)
                                ..+...|+.||.+.+.+++.++..+   |+++.++.|+.+.+|....   ....+.++..+....|.   
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~---~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFP---EKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCT---TSHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCc---CcHHHHHHHHHHcCCCcEEe
Confidence                      1123459999999999999999875   7899999999999885432   11223344444444442   


Q ss_pred             C------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          221 C------RPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       221 ~------~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      +      .+..++|+|+++..++.  ... .|..+++.+|...
T Consensus       225 g~g~~~r~~i~v~D~a~ai~~~~~--~~~-~~~~~Ni~s~~~~  264 (361)
T d1kewa_         225 GKGDQIRDWLYVEDHARALHMVVT--EGK-AGETYNIGGHNEK  264 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHH--HCC-TTCEEEECCCCEE
T ss_pred             CCCCeEEeCEEHHHHHHHHHHHHh--cCC-CCCeEEECCCCCc
Confidence            1      24689999999999883  332 4778999777543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=2.6e-18  Score=160.55  Aligned_cols=216  Identities=13%  Similarity=-0.035  Sum_probs=148.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-----ELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-----~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +++||||||||+||++++++|+++|++|++++|...     +...+...... ....+.++.+|+++.+++.+.++.   
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~---   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH---
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh---
Confidence            358999999999999999999999999999998532     22222111111 134688999999999999998875   


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecCcccccC---------
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISSVAGVTA---------  153 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS~~~~~~---------  153 (367)
                         .++|+|||+|+......    ..+.....+..|+.++.+++.++...... ....++++.||......         
T Consensus        78 ---~~~D~Vih~Aa~~~~~~----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~  150 (339)
T d1n7ha_          78 ---IKPDEVYNLAAQSHVAV----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  150 (339)
T ss_dssp             ---HCCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             ---hccchhhhccccccccc----cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC
Confidence               36899999999754321    23455678899999999999988765433 23445666665543221         


Q ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHH-HhhcCC---------CCC
Q 035642          154 -APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEG-LVSRTP---------ICR  222 (367)
Q Consensus       154 -~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~p---------~~~  222 (367)
                       ......|+.||.+.+.+++.+....   |+.+..+.|+.+.+|................. .....+         ..-
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd  227 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  227 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccc
Confidence             2235689999999999999998875   79999999999999864321111111111111 111111         112


Q ss_pred             CCCHHHHHHHHHHHhC
Q 035642          223 PGEPDEVSSLVAFLCF  238 (367)
Q Consensus       223 ~~~~~dvA~ai~~L~s  238 (367)
                      +..++|+|+++..++.
T Consensus       228 ~~~v~D~a~~~~~~~~  243 (339)
T d1n7ha_         228 WGFAGDYVEAMWLMLQ  243 (339)
T ss_dssp             CEEHHHHHHHHHHHHT
T ss_pred             ceeeehHHHHHHHHHh
Confidence            5679999999999884

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.77  E-value=1.1e-17  Score=155.65  Aligned_cols=226  Identities=13%  Similarity=0.067  Sum_probs=149.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-ELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||+|+||++++++|+++|++|+++++-.. ........+.. ..++.++.+|++|.+++.++++..      ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~------~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence            6999999999999999999999999999875321 11222223322 457889999999999999988753      589


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------------  154 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------------  154 (367)
                      +|||+|+......    ..++.+..+++|+.|+.++++++...    +..+.++.||..+..+.                
T Consensus        75 ~Vih~aa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          75 SCFHLAGQVAMTT----SIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             eEEeecccccccc----cccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccccccc
Confidence            9999999764321    23345688899999999999987653    33455555555443321                


Q ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh-----c
Q 035642          155 ------------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS-----R  217 (367)
Q Consensus       155 ------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~  217 (367)
                                  .....|+.+|...+.+.......+   ++....+.|..+..+....................     .
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        134579999999999999998886   44555555544443332222221111112222211     1


Q ss_pred             CC---------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          218 TP---------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       218 ~p---------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      .+         ..-+..++|++++++.++.. .....|+.+.+.+|..
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-~~~~~~~~~~i~~~~~  270 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTIV  270 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCGG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhc-cccccCcccccccccc
Confidence            11         11256799999999987732 2345788888876643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.8e-17  Score=155.67  Aligned_cols=231  Identities=15%  Similarity=0.077  Sum_probs=158.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC------hh---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRN------QT---ELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~------~~---~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      |+++||||||||+||.+++++|+++|+.|+++++.      ..   ...+..+.+  .+.++.++.+|++|.+++.+++.
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~   78 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFK   78 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccccccccc
Confidence            35789999999999999999999999999998642      11   111222222  24578899999999999998886


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----
Q 035642           80 TVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----  154 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----  154 (367)
                      .      ..+++++|.|+......    +.++....+++|+.|+.++++++.    +.+..+++++||.......     
T Consensus        79 ~------~~~~~i~h~Aa~~~~~~----~~~~p~~~~~~Nv~gt~~l~~~~~----~~~v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          79 K------YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             H------CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             c------cccccccccccccCcHh----hHhCHHHHHHhhhcccccccchhh----hcCcccccccccceeeeccccccc
Confidence            5      57899999999754321    233456778999999999988874    3456789999887655321     


Q ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCcccccc-------CChhhhHHHHHHhh-cCC
Q 035642          155 -------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIR-------HDPAKNKIVEGLVS-RTP  219 (367)
Q Consensus       155 -------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~-~~p  219 (367)
                             .....|+.+|.+.+..++.++..  ..++....+.|+.+.++......       ...-.......... ..+
T Consensus       145 ~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (346)
T d1ek6a_         145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (346)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCc
Confidence                   23447999999999999988764  34788888999888776432111       01111111111111 111


Q ss_pred             ---------------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          220 ---------------ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       220 ---------------~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                                     .+.+..++|+|.++..+.........++.+++.+|...
T Consensus       223 i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence                           12367899999998876543444556888998887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1e-17  Score=157.09  Aligned_cols=213  Identities=12%  Similarity=-0.037  Sum_probs=146.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT-----ELNERLQEWKL-KGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~-----~~~~~~~~l~~-~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++|||||||+||.+++++|+++|++|++++|...     +.+.+...... ...++.++.+|++|.+.+.++++..    
T Consensus         3 I~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   78 (347)
T d1t2aa_           3 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV----   78 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc----
Confidence            4499999999999999999999999999999642     12221111111 1347899999999999999998763    


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------C
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------A  154 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~  154 (367)
                        .+++++|.|+......    ..+.....+++|+.|+.++++++..+-. .+..++|++||.+.+..           .
T Consensus        79 --~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVKI----SFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeeccccch----hhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              5788898888643221    3344556789999999999998866522 23458999998764321           1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHHHHhhcCC---------CCCCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVEGLVSRTP---------ICRPG  224 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~p---------~~~~~  224 (367)
                      .+...|+.||.+.|.+++.++..+   ++.+..+.|+.+.+|.......... ............+         ...+.
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence            234579999999999999998775   7888899999998874332111111 1112222222221         12367


Q ss_pred             CHHHHHHHHHHHhC
Q 035642          225 EPDEVSSLVAFLCF  238 (367)
Q Consensus       225 ~~~dvA~ai~~L~s  238 (367)
                      .++|+++++..++.
T Consensus       229 ~v~D~~~a~~~~~~  242 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQ  242 (347)
T ss_dssp             EHHHHHHHHHHHHH
T ss_pred             EecHHHHHHHHHhh
Confidence            89999999999884

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=9.3e-18  Score=157.29  Aligned_cols=219  Identities=13%  Similarity=0.083  Sum_probs=155.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||||||||+||++++++|+++| ++|+++++.........     ...++.++.+|+++.+++.+.+.       ..+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCCC
Confidence            59999999999999999999999 48999988765433221     14579999999998877655432       2489


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC---------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP---------------  155 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~---------------  155 (367)
                      +|||+|+......    ..+.....+.+|+.|+.++++++..    . +.++++.||...+....               
T Consensus        70 ~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~----~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          70 VVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----Y-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccccccc----cccCCcccccccccccccccccccc----c-cccccccccccccccccccccccccccccccc
Confidence            9999999764321    2233456789999999999999854    2 34667777766543211               


Q ss_pred             ---CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccC-----ChhhhHHHHHHhhcCC--------
Q 035642          156 ---LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRH-----DPAKNKIVEGLVSRTP--------  219 (367)
Q Consensus       156 ---~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~p--------  219 (367)
                         ....|+.||.+.|.+++.+++.+   |+++..+.|+.+.++.......     ......+...+....+        
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence               12469999999999999999886   7889999999888875443221     1122223333333322        


Q ss_pred             -CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 035642          220 -ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGG  254 (367)
Q Consensus       220 -~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG  254 (367)
                       ...+..++|+|+++..++........|+.+++.+|
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence             12367899999999999865444557899999644

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.75  E-value=1e-17  Score=155.39  Aligned_cols=225  Identities=14%  Similarity=-0.008  Sum_probs=152.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN-ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~-~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++||||||||+||++++++|+++|++|++++|...... ...+.+. ...++.++.+|++|.+++.+++...      ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc------cc
Confidence            47999999999999999999999999999998753211 1122221 2346899999999999999888763      56


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCccccc-----------CCCCCc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVT-----------AAPLTP  158 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~-----------~~~~~~  158 (367)
                      ++++|+|+......    ..+.....+..|+.|+.+++.++..+   ....++++.||.+-..           +.....
T Consensus        74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccccC
Confidence            78888887643321    11234577899999999999988654   2235677666644321           112456


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhh-cCC---------CCCCCCHHH
Q 035642          159 LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVS-RTP---------ICRPGEPDE  228 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~p---------~~~~~~~~d  228 (367)
                      .|+.||.+.+.+++.++.+.   ++++..+.|+.+.+|..............+..... ..+         .+.+..++|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            89999999999999998875   68889999998888854321111111112222111 111         112678999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          229 VSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       229 vA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +|+++..++.  ..  .+..+++.+|..
T Consensus       224 ~~~~~~~~~~--~~--~~~~~ni~~~~~  247 (321)
T d1rpna_         224 YVEAMWLMLQ--QD--KADDYVVATGVT  247 (321)
T ss_dssp             HHHHHHHHHH--SS--SCCCEEECCSCE
T ss_pred             HHHHHHHHHh--cC--CcCCceeccccc
Confidence            9999999883  22  234466666543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.75  E-value=4.4e-17  Score=152.76  Aligned_cols=227  Identities=11%  Similarity=0.012  Sum_probs=159.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT----ELNERLQEWK-LKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~----~~~~~~~~l~-~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .+++|||||||+||++++++|.++|++|++++|...    .......... ....++.++.+|+.|........      
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~------   89 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC------   89 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH------
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc------
Confidence            359999999999999999999999999999987322    2222211111 11346889999999998776654      


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------  154 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------  154 (367)
                        ...+.++|.++......    +.++....+++|+.|+.++++++..    .+..++|++||.+.+...          
T Consensus        90 --~~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~  159 (341)
T d1sb8a_          90 --AGVDYVLHQAALGSVPR----SINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTI  159 (341)
T ss_dssp             --TTCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             --ccccccccccccccccc----cccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCCCC
Confidence              46788999887643221    4556677899999999999998854    445799999998765322          


Q ss_pred             -CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCC-hhhhHHHHHHhhcCCC---------CCC
Q 035642          155 -PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHD-PAKNKIVEGLVSRTPI---------CRP  223 (367)
Q Consensus       155 -~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~---------~~~  223 (367)
                       .+...|+.||.+.|.+++.+++..   ++++..+.|+.+.++........ .-.......+....|.         ..+
T Consensus       160 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~  236 (341)
T d1sb8a_         160 GKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF  236 (341)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEE
Confidence             234689999999999999998775   68889999999988754432221 1122233333333222         236


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          224 GEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       224 ~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      ..++|+|.++..++.... ...|+.+++.++..
T Consensus       237 i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~  268 (341)
T d1sb8a_         237 CYIENTVQANLLAATAGL-DARNQVYNIAVGGR  268 (341)
T ss_dssp             EEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCC
T ss_pred             EEEeccchhhhhhhhccc-cccceeeeeccccc
Confidence            778999999988774332 34677888766543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.75  E-value=6.3e-20  Score=159.00  Aligned_cols=152  Identities=12%  Similarity=0.018  Sum_probs=112.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++++ +++||||+||||+++++.|+++|++|++++|+.++++++.+++.... ++....+|+++.+++++++       
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh-------
Confidence            46777 99999999999999999999999999999999999999988886542 3456778999999988776       


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-CCCCccHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-APLTPLYGPYN  164 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-~~~~~~Y~asK  164 (367)
                       +++|+||||||+..    ...+.+.|+..+++|+.+.++....+.+.+.... .....+++.....+ ..+...|+++|
T Consensus        91 -~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~sk  164 (191)
T d1luaa1          91 -KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLHR  164 (191)
T ss_dssp             -TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHHH
T ss_pred             -cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHHH
Confidence             68999999999742    3458899999999998887766544332221111 22222232222211 11234699999


Q ss_pred             HHHHHHHH
Q 035642          165 GAMNQLTK  172 (367)
Q Consensus       165 aal~~l~~  172 (367)
                      +++..+++
T Consensus       165 ~a~~~l~~  172 (191)
T d1luaa1         165 ACIAKLFE  172 (191)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHHh
Confidence            99987764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=3.9e-17  Score=154.32  Aligned_cols=223  Identities=16%  Similarity=0.010  Sum_probs=156.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      |+.+.+||||||||+||++++++|+++|+.|+++++......      ........+..+|+.+.+.+.+++        
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~--------   77 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT--------   77 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH--------
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHh--------
Confidence            333338999999999999999999999999999987543210      001123467778999998877765        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------  154 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------  154 (367)
                      ..+|.+||.|+.......   ..+.....+.+|+.++.+++.++..    .+..++|++||...+...            
T Consensus        78 ~~~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~  150 (363)
T d2c5aa1          78 EGVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKE  150 (363)
T ss_dssp             TTCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECG
T ss_pred             hcCCeEeecccccccccc---cccccccccccccchhhHHHHhHHh----hCcccccccccccccccccccccccccccc
Confidence            468999999987654321   1234566788999999999888754    456799999997765321            


Q ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh--hHHHHHHhhcC--------
Q 035642          155 ------PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK--NKIVEGLVSRT--------  218 (367)
Q Consensus       155 ------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~--------  218 (367)
                            .....|+.||.+.+.+++.+..++   |+++..+.|+.+.++...........  ...........        
T Consensus       151 ~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  227 (363)
T d2c5aa1         151 SDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG  227 (363)
T ss_dssp             GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCS
T ss_pred             ccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCC
Confidence                  124579999999999999998775   79999999999988754332222111  11111111111        


Q ss_pred             -CCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          219 -PICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       219 -p~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                       ..+.+...+|+++++..++  +..  .|+.+++.+|...
T Consensus       228 ~~~rd~i~v~D~~~~~~~~~--~~~--~~~~~ni~~~~~~  263 (363)
T d2c5aa1         228 LQTRSFTFIDECVEGVLRLT--KSD--FREPVNIGSDEMV  263 (363)
T ss_dssp             CCEECCEEHHHHHHHHHHHH--HSS--CCSCEEECCCCCE
T ss_pred             CeEEEEeehhHHHHHHHHHH--hCC--CCCeEEEecCCcc
Confidence             1234778999999999888  332  4667888877554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.7e-17  Score=141.34  Aligned_cols=195  Identities=11%  Similarity=0.030  Sum_probs=133.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+||||||+||++++++|+++|++|.+++|+.+++...      ....+.++.+|++|.+++.+++        .+.|+
T Consensus         5 kIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al--------~~~d~   70 (205)
T d1hdoa_           5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AGQDA   70 (205)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHh--------cCCCE
Confidence            799999999999999999999999999999998774321      1345788999999999988877        46899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCC----ccHHHHHHHH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLT----PLYGPYNGAM  167 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~----~~Y~asKaal  167 (367)
                      |||++|........           +++..++.++++++    ++.+..++|++||.......+..    ..|...|.+.
T Consensus        71 vi~~~g~~~~~~~~-----------~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  135 (205)
T d1hdoa_          71 VIVLLGTRNDLSPT-----------TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (205)
T ss_dssp             EEECCCCTTCCSCC-----------CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEEeccCCchhhh-----------hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchHHHHH
Confidence            99999975332111           24445556665554    45667899999997665443322    2456666666


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 035642          168 NQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAASYITGQ  247 (367)
Q Consensus       168 ~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~~itG~  247 (367)
                      +.+.+       ..|++.+.|.||++...........         .........+.+.+|+|++++.++.  .+...|+
T Consensus       136 e~~l~-------~~~~~~tiirp~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~DvA~~~~~~l~--~~~~~g~  197 (205)
T d1hdoa_         136 HKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTV---------TLDGRGPSRVISKHDLGHFMLRCLT--TDEYDGH  197 (205)
T ss_dssp             HHHHH-------HTCSEEEEECCSEEECCCCCSCCEE---------ESSSCSSCSEEEHHHHHHHHHHTTS--CSTTTTC
T ss_pred             HHHHH-------hcCCceEEEecceecCCCCcccEEE---------eeCCCCCCCcCCHHHHHHHHHHHhC--CCCCCCE
Confidence            54432       2489999999998754321110000         0011122345689999999999884  3445688


Q ss_pred             EEEeCC
Q 035642          248 VICVDG  253 (367)
Q Consensus       248 ~i~vdg  253 (367)
                      .+.+.+
T Consensus       198 ~~~~s~  203 (205)
T d1hdoa_         198 STYPSH  203 (205)
T ss_dssp             EEEEEC
T ss_pred             EEecCC
Confidence            887754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=3.2e-17  Score=154.12  Aligned_cols=171  Identities=18%  Similarity=0.100  Sum_probs=127.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE-LNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~-~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      |+||||||||+||++++++|+++|++|+++++.... .+.....-.....++.++.+|++|.++++++++.      -++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence            589999999999999999999999999998763221 1111111111244678889999999999998864      369


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC---------------C
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA---------------A  154 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~---------------~  154 (367)
                      |+|||+|+......    ..+.......+|+.|+.++++++..    .+..++|++||...+..               .
T Consensus        76 d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEECPL  147 (347)
T ss_dssp             CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEEccccccccc----cccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccccCC
Confidence            99999999753221    2334456788999999999999854    34568999999765531               1


Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCC
Q 035642          155 PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTS  196 (367)
Q Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~  196 (367)
                      .+...|+.||.+.|.+++.+..... .++++..+.|+.+.++
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNSDK-KSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHST-TSCEEEEEEECEEECC
T ss_pred             CCCChhHhHHHHHHHHHHHHHHhhc-cCCcEEEEeecceEee
Confidence            1345799999999999999986643 4788888888777654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.1e-17  Score=151.44  Aligned_cols=217  Identities=11%  Similarity=0.054  Sum_probs=145.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||||||+|.||++++++|+++|++|++++|....-.+..... ....++.....|+.+.     +       + .++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~-----~-------~-~~~   66 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP-----L-------Y-IEV   66 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC-----C-------C-CCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH-----H-------H-cCC
Confidence            358999999999999999999999999999987432111111111 1123455555554321     1       2 469


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC----------------
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA----------------  153 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~----------------  153 (367)
                      |+|||+|+.......    .++..+.+++|+.|+.++++++...    + .++|++||.+.+..                
T Consensus        67 d~VihlAa~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          67 DQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             SEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             CEEEECcccCCchhH----HhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            999999997543211    1234567899999999999987542    2 47999999755431                


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC---------CCCCC
Q 035642          154 APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP---------ICRPG  224 (367)
Q Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~  224 (367)
                      ..+...|+.||.+.+.+++.++..+   |+++..+.|+.+.+|....... ...+.++.......+         ...+.
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~-~~i~~~i~~~~~g~~i~i~~~g~~~r~~i  213 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDG-RVVSNFILQALQGEPLTVYGSGSQTRAFQ  213 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCC-CHHHHHHHHHHHTCCEEEESSSCCEEECE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCc-cHHHHHHHHHHcCCCeEEeCCCCeeEccE
Confidence            1234579999999999999999885   7999999999999986543211 122223444333322         12356


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .++|+++++..++.  ..  .+..+++.+|...
T Consensus       214 ~v~D~~~~~~~~~~--~~--~~~~~n~~~~~~~  242 (312)
T d2b69a1         214 YVSDLVNGLVALMN--SN--VSSPVNLGNPEEH  242 (312)
T ss_dssp             EHHHHHHHHHHHHT--SS--CCSCEEESCCCEE
T ss_pred             EHHHHHHHHHHHHh--hc--cCCceEecCCccc
Confidence            79999999998883  22  3456788777555

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=1.4e-16  Score=147.33  Aligned_cols=191  Identities=14%  Similarity=0.108  Sum_probs=138.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||||+||++++++|+++|+.|+++++..+                    +|+.+.+.++++++.      ..+|
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~------~~~d   56 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFAS------ERID   56 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhh------cCCC
Confidence            48999999999999999999999999887764421                    599999999888764      3689


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCC---------------
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAP---------------  155 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~---------------  155 (367)
                      .++|+|+.......   ......+.+++|+.|+.++++++..    .+..++|++||.+.+.+..               
T Consensus        57 ~v~~~a~~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~  129 (315)
T d1e6ua_          57 QVYLAAAKVGGIVA---NNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  129 (315)
T ss_dssp             EEEECCCCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEEEcchhcccccc---chhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCCCC
Confidence            99999986543211   2334456688999999999988854    4567899999988654211               


Q ss_pred             -CCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh-hHH-----HHHHhhc---------CC
Q 035642          156 -LTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK-NKI-----VEGLVSR---------TP  219 (367)
Q Consensus       156 -~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~-~~~-----~~~~~~~---------~p  219 (367)
                       ....|+.||.+.|.+++.+.++.   |+++..+.|+.+.+|........... ...     .......         .+
T Consensus       130 ~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  206 (315)
T d1e6ua_         130 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  206 (315)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCce
Confidence             12369999999999999998875   79999999999999865432222110 001     1111111         23


Q ss_pred             CCCCCCHHHHHHHHHHHh
Q 035642          220 ICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       220 ~~~~~~~~dvA~ai~~L~  237 (367)
                      ...+..++|++.++..+.
T Consensus       207 ~~~~~~v~d~~~~~~~~~  224 (315)
T d1e6ua_         207 MREFLHVDDMAAASIHVM  224 (315)
T ss_dssp             EECEEEHHHHHHHHHHHH
T ss_pred             EEEEEEeehhHHHHHHhh
Confidence            345568999999998877

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.70  E-value=8.4e-17  Score=149.65  Aligned_cols=220  Identities=14%  Similarity=0.092  Sum_probs=154.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEE------EEeCChhHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIH------TCSRNQTELN-ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi------~~~R~~~~~~-~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +||||||+|.||++++++|+++|+.|.      ..++...... ...... ....++.++.+|+++........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc------
Confidence            599999999999999999999998543      3332211100 000111 12457999999999998777544      


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC----------
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA----------  154 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~----------  154 (367)
                        ...|.++|.|+......    ........+++|+.|+.++++++..    .+..++|++||.+.+...          
T Consensus        75 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          75 --RGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             --TTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             --cccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCCC
Confidence              56899999998754321    3344566788999999999998854    446789999998765432          


Q ss_pred             -CCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCC---------CCC
Q 035642          155 -PLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPIC---------RPG  224 (367)
Q Consensus       155 -~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~---------~~~  224 (367)
                       .+...|+.||.+.+.+++.++++.   |+++..+.|+.+.+|....   ....+.++.......++.         .+.
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~---~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHP---EKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCT---TSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCc---CcHHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence             234579999999999999999875   7999999999999875321   112223444444433321         246


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCccc
Q 035642          225 EPDEVSSLVAFLCFPAASYITGQVICVDGGMTV  257 (367)
Q Consensus       225 ~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~~  257 (367)
                      .++|+|+++..++..  . ..|+.+++.+|...
T Consensus       219 ~v~D~a~ai~~~~~~--~-~~~~~~ni~~~~~~  248 (322)
T d1r6da_         219 HTDDHCRGIALVLAG--G-RAGEIYHIGGGLEL  248 (322)
T ss_dssp             EHHHHHHHHHHHHHH--C-CTTCEEEECCCCEE
T ss_pred             EHHHHHHHHHHHHhC--C-CCCCeeEEeecccc
Confidence            799999999999832  2 25788888777554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.70  E-value=5e-17  Score=152.73  Aligned_cols=218  Identities=16%  Similarity=0.111  Sum_probs=146.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh--hHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ--TEL-NERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~--~~~-~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +||||||||.||.+++++|+++|+.|.+++++.  ... ....+.  ..+.++.++.+|++|.+.+..++        ..
T Consensus         4 kILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~--------~~   73 (346)
T d1oc2a_           4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLA--------AK   73 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHH--------TT
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHH--------hh
Confidence            799999999999999999999998655444321  100 000011  12457999999999999998886        45


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC---------------
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA---------------  153 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~---------------  153 (367)
                      .|.++|.|+......    ...+....+++|+.|+.+++.++...     +.++|++||.+.+..               
T Consensus        74 ~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~  144 (346)
T d1oc2a_          74 ADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEGPG  144 (346)
T ss_dssp             CSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             hhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccCcc
Confidence            788999998764321    12334567899999999999887554     246888877654421               


Q ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC------
Q 035642          154 --------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP------  219 (367)
Q Consensus       154 --------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p------  219 (367)
                              ..+...|+.+|.+.|.+++.+..+.   |+++..+.|+.+.+|....   .......+.......+      
T Consensus       145 ~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~---~~~~~~~i~~~~~~~~~~i~~~  218 (346)
T d1oc2a_         145 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHI---EKFIPRQITNILAGIKPKLYGE  218 (346)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCT---TSHHHHHHHHHHHTCCCEEETT
T ss_pred             cccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCc---cchhHHHHHHHHcCCceeEeCC
Confidence                    1123569999999999999998775   8999999999999874321   1111122222222222      


Q ss_pred             ---CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          220 ---ICRPGEPDEVSSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       220 ---~~~~~~~~dvA~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                         ...+..++|+|++++.++  ......+.....+++..
T Consensus       219 g~~~r~~i~v~D~a~a~~~~~--~~~~~~~~~~~~~~~~~  256 (346)
T d1oc2a_         219 GKNVRDWIHTNDHSTGVWAIL--TKGRMGETYLIGADGEK  256 (346)
T ss_dssp             SCCEEECEEHHHHHHHHHHHH--HHCCTTCEEEECCSCEE
T ss_pred             CCccccccchhhHHHHHHHHH--hhcccCccccccccccc
Confidence               223567999999998877  33333444444444433

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.69  E-value=1.2e-15  Score=145.15  Aligned_cols=172  Identities=13%  Similarity=0.096  Sum_probs=129.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCCEEEEEeC---------ChhHHHHHHHHHHhc--------CCcEEEEEccCCCHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGAIIHTCSR---------NQTELNERLQEWKLK--------GLKVTGSVCDLSSREQ   73 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~~Vi~~~R---------~~~~~~~~~~~l~~~--------~~~~~~~~~Dlsd~~s   73 (367)
                      +||||||+|+||++++++|++ .|++|+++++         ..+..+.....+...        .....++.+|++|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            699999999999999999986 7899999874         112223333333221        2357888999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA  153 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~  153 (367)
                      ++++++..     .++|+|+|.|+......    ..+.....+.+|+.++.+++.++..    .+..+++++||......
T Consensus        84 l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          84 LNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBS
T ss_pred             hhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhhhc----cCCcccccccccccccc
Confidence            99988764     67999999999754321    2334556788999999999988854    44567888777655431


Q ss_pred             ------------------CCCCccHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccc
Q 035642          154 ------------------APLTPLYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSD  199 (367)
Q Consensus       154 ------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~  199 (367)
                                        ..+...|+.||.+.+.+++.+...+   |+.+.++.|+.+.+|...
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence                              1124679999999999999998775   799999999999887654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=1.8e-15  Score=141.98  Aligned_cols=211  Identities=15%  Similarity=0.087  Sum_probs=150.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||||||||+||.+++++|+++|++|++++|+..+.....+.... ...+.++.+|++|++.+.++++.      ..+|
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~~~l~~~~~~------~~~~   81 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-ADGMQSEIGDIRDQNKLLESIRE------FQPE   81 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-TTTSEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc-ccCCeEEEeeccChHhhhhhhhh------chhh
Confidence            4999999999999999999999999999999987654444333221 34688999999999999998875      3689


Q ss_pred             EEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC------------CCCc
Q 035642           91 LLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA------------PLTP  158 (367)
Q Consensus        91 ~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~------------~~~~  158 (367)
                      +++|.|+.....    .+.+..+..+.+|+.|+.++++++...   .....++..||.......            .+..
T Consensus        82 ~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~  154 (356)
T d1rkxa_          82 IVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYD  154 (356)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSS
T ss_pred             hhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccCCCC
Confidence            999999965332    134456778899999999999988653   334556666655443211            1345


Q ss_pred             cHHHHHHHHHHHHHHHHHHhCC------CCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC--------CCCCC
Q 035642          159 LYGPYNGAMNQLTKHLECEQAK------DNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP--------ICRPG  224 (367)
Q Consensus       159 ~Y~asKaal~~l~~~la~e~~~------~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~  224 (367)
                      .|+.+|.+.+.+++.++.++..      .++.+..+.|+.+.+|.....  ..-...+........+        ...+.
T Consensus       155 ~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  232 (356)
T d1rkxa_         155 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--DRIVPDILRAFEQSQPVIIRNPHAIRPWQ  232 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--SCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             ccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh--hHHHHHHHHHHhCCCceEEeecccccccc
Confidence            6999999999999998887643      368899999999888753221  1111223333333322        12345


Q ss_pred             CHHHHHHHHHHHh
Q 035642          225 EPDEVSSLVAFLC  237 (367)
Q Consensus       225 ~~~dvA~ai~~L~  237 (367)
                      .++|++.++..++
T Consensus       233 ~v~D~~~a~~~~~  245 (356)
T d1rkxa_         233 HVLEPLSGYLLLA  245 (356)
T ss_dssp             ETHHHHHHHHHHH
T ss_pred             ccccccchhhhhh
Confidence            6899999988776

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.1e-16  Score=142.39  Aligned_cols=194  Identities=15%  Similarity=0.170  Sum_probs=133.8

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSS   83 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~   83 (367)
                      +.|++ +||||||||.||++++++|+++|.  +|++++|++.....      .....+....+|+.+.+++.+.+     
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~-----   78 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF-----   78 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG-----
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc-----
Confidence            33445 999999999999999999999995  89999997643221      11235666777888776655444     


Q ss_pred             HcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHH
Q 035642           84 IFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPY  163 (367)
Q Consensus        84 ~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~as  163 (367)
                         ...|+++|++|...       ..........+|+.++.++.+.+.    +.+..++|++||..+...  ....|+.+
T Consensus        79 ---~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~fi~~Ss~~~~~~--~~~~Y~~~  142 (232)
T d2bkaa1          79 ---QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADKS--SNFLYLQV  142 (232)
T ss_dssp             ---SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             ---cccccccccccccc-------cccchhhhhhhcccccceeeeccc----ccCccccccCCccccccC--ccchhHHH
Confidence               56899999998541       233455667889999999988874    355789999999876543  34579999


Q ss_pred             HHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC----CCCCCHHHHHHHHHHHhC
Q 035642          164 NGAMNQLTKHLECEQAKDNI-RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI----CRPGEPDEVSSLVAFLCF  238 (367)
Q Consensus       164 Kaal~~l~~~la~e~~~~gI-rvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~dvA~ai~~L~s  238 (367)
                      |...|...+.+       |+ ++..+.||++.++.....   . .......+....+.    ....+++|+|++++.++.
T Consensus       143 K~~~E~~l~~~-------~~~~~~IlRP~~i~G~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~  211 (232)
T d2bkaa1         143 KGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESR---P-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV  211 (232)
T ss_dssp             HHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGS---H-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             HHHhhhccccc-------cccceEEecCceeecCCCcCc---H-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHh
Confidence            99888755432       33 577789999988753321   1 11122223232222    234678999999988874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=5.1e-16  Score=136.57  Aligned_cols=210  Identities=10%  Similarity=0.039  Sum_probs=136.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||||||||+||++++++|+++|+  .|+...|++++....       ..++.++.+|+++.+++.+++        ..+
T Consensus         5 tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~--------~~~   69 (252)
T d2q46a1           5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------QGI   69 (252)
T ss_dssp             EEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------TTC
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCCcEEEEeeecccccccccc--------ccc
Confidence            899999999999999999999996  466678887654322       345678889999999988877        468


Q ss_pred             cEEEEcCCCCCCCC---------ccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCc--
Q 035642           90 NLLVNNAAVAVPKE---------ALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTP--  158 (367)
Q Consensus        90 D~lI~~Ag~~~~~~---------~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~--  158 (367)
                      |.+||+|+......         ........+.....+|+.++.++.......    ..+...+.|+.....+.....  
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCCCcccccc
Confidence            99999998653211         001111233445678889988887766543    356788887766554433222  


Q ss_pred             ---cHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 035642          159 ---LYGPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPICRPGEPDEVSSLVAF  235 (367)
Q Consensus       159 ---~Y~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ai~~  235 (367)
                         .|...+.+.    ..+..+   .|+++..++||.+.++...........   ....  ......+.+++|+|++++.
T Consensus       146 ~~~~~~~~~~~~----~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~---~~~~--~~~~~~~i~~~Dva~a~~~  213 (252)
T d2q46a1         146 GNGNILVWKRKA----EQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGK---DDEL--LQTDTKTVPRADVAEVCIQ  213 (252)
T ss_dssp             GGCCHHHHHHHH----HHHHHH---SSSCEEEEEECEEECSCTTSSCEEEES---TTGG--GGSSCCEEEHHHHHHHHHH
T ss_pred             cccchhhhhhhh----hhhhhc---ccccceeecceEEECCCcchhhhhhcc---Cccc--ccCCCCeEEHHHHHHHHHH
Confidence               333333332    222222   478999999999988754321110000   0000  0111235689999999999


Q ss_pred             HhCCCCCCccccEEEeCCC
Q 035642          236 LCFPAASYITGQVICVDGG  254 (367)
Q Consensus       236 L~s~~~~~itG~~i~vdgG  254 (367)
                      ++.  .+...|+++++.++
T Consensus       214 ~l~--~~~~~g~~~~i~~~  230 (252)
T d2q46a1         214 ALL--FEEAKNKAFDLGSK  230 (252)
T ss_dssp             HTT--CGGGTTEEEEEEEC
T ss_pred             HhC--CccccCcEEEEeeC
Confidence            884  44567999988654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.40  E-value=2.8e-13  Score=117.86  Aligned_cols=186  Identities=10%  Similarity=0.135  Sum_probs=118.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      ++||||||||.||++++++|+++|+  +|+...|+...          ...++   ..+..|..++.+       ...+.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~~~-------~~~~~   62 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAELLP-------QLDGS   62 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHHGG-------GCCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhhhh-------ccccc
Confidence            5899999999999999999999998  67777776421          11223   334555443322       12257


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGAMN  168 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaal~  168 (367)
                      +|.+||++|.....      ....+....+|+.++.++++++.    +.+..+++++||..+...  ....|..+|...|
T Consensus        63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E  130 (212)
T d2a35a1          63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGELE  130 (212)
T ss_dssp             CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             hheeeeeeeeeccc------cccccccccchhhhhhhcccccc----cccccccccccccccccc--cccchhHHHHHHh
Confidence            89999999864221      11124567889999999888763    456789999999766432  3467999998887


Q ss_pred             HHHHHHHHHhCCCCe-EEEEEecCcccCCccccccCChhhhHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCC
Q 035642          169 QLTKHLECEQAKDNI-RANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTPI-CRPGEPDEVSSLVAFLCFP  239 (367)
Q Consensus       169 ~l~~~la~e~~~~gI-rvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~ai~~L~s~  239 (367)
                      .+.+       ..+. +++.+.|+.+.++....... ..   ....+....+. .+...++|+|++++.++..
T Consensus       131 ~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~-~~---~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~  192 (212)
T d2a35a1         131 QALQ-------EQGWPQLTIARPSLLFGPREEFRLA-EI---LAAPIARILPGKYHGIEACDLARALWRLALE  192 (212)
T ss_dssp             HHHT-------TSCCSEEEEEECCSEESTTSCEEGG-GG---TTCCCC----CHHHHHHHHHHHHHHHHHHTC
T ss_pred             hhcc-------ccccccceeeCCcceeCCcccccHH-HH---HHHHHhhccCCCCcEEEHHHHHHHHHHHHcC
Confidence            6553       2243 57789999998774321100 00   00000000000 0125789999999998843

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.40  E-value=3e-12  Score=115.20  Aligned_cols=191  Identities=16%  Similarity=0.126  Sum_probs=129.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||+||++++++|.++|++|+.++|+.                     +|++|.++++++++..      ++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d~   55 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPNV   55 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCCE
Confidence            599999999999999999999999999998863                     4999999999888753      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      |||+|+......    .....+..+..|+.....+.......     ...+++.||......           ......|
T Consensus        56 vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          56 VINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             EEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             EEeecccccccc----ccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhh
Confidence            999998753221    23334566677887777776665442     345666666544321           2245579


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHHHhhcCC-------CCCCCCHHHHHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEGLVSRTP-------ICRPGEPDEVSSLV  233 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~dvA~ai  233 (367)
                      +.+|...+.+.+..       +.+...+.|+++.++....      ............+       ...+..++|+++++
T Consensus       127 ~~~k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~  193 (281)
T d1vl0a_         127 GKTKLEGENFVKAL-------NPKYYIVRTAWLYGDGNNF------VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  193 (281)
T ss_dssp             HHHHHHHHHHHHHH-------CSSEEEEEECSEESSSSCH------HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             hhhhhHHHHHHHHh-------CCCccccceeEEeCCCccc------ccchhhhhccCCceeecCCceeccchhhhhhhhh
Confidence            99998887766432       4567789999998874321      1123333322221       12456899999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCc
Q 035642          234 AFLCFPAASYITGQVICVDGGM  255 (367)
Q Consensus       234 ~~L~s~~~~~itG~~i~vdgG~  255 (367)
                      .+++  +.. .+| .+++.+|.
T Consensus       194 ~~~~--~~~-~~g-~~~~~~~~  211 (281)
T d1vl0a_         194 LKVI--DEK-NYG-TFHCTCKG  211 (281)
T ss_dssp             HHHH--HHT-CCE-EEECCCBS
T ss_pred             hhhh--hhc-ccC-ceeEeCCC
Confidence            9998  332 245 45554443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.35  E-value=4.7e-12  Score=115.24  Aligned_cols=206  Identities=12%  Similarity=0.025  Sum_probs=120.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHH--H--HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL--N--ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~--~--~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++||||||||.||++++++|+++|++|++++|+....  .  .....+.  ...+.++.+|++|.+++.+.+        
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~--------   73 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--------   73 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--------
Confidence            3899999999999999999999999999999975321  1  1122222  446788999999999888776        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----CCCccHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----PLTPLYG  161 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----~~~~~Y~  161 (367)
                      ...+.++++++.....               .|..+..+++.++.    +.+..++++.||.......     .....|.
T Consensus        74 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a~----~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          74 KQVDVVISALAGGVLS---------------HHILEQLKLVEAIK----EAGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHHH----HSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cCcchhhhhhhhcccc---------------cchhhhhHHHHHHH----HhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence            4578888888754221               23333444444442    3444567777775443221     1223344


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh----hhHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Q 035642          162 PYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA----KNKIVEGLVSRTPICRPGEPDEVSSLVAFLC  237 (367)
Q Consensus       162 asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~  237 (367)
                      .+|..++    .+..+   .++....+.||.+.++..........    .......+........+.+++|+|++++.++
T Consensus       135 ~~~~~~~----~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVR----RAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHH----HHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHH----Hhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            4444443    33333   36778888998876543221110000    0000000000111123578999999999988


Q ss_pred             CCCCCCccccEE-EeCCC
Q 035642          238 FPAASYITGQVI-CVDGG  254 (367)
Q Consensus       238 s~~~~~itG~~i-~vdgG  254 (367)
                      .  .....|+.+ .+.++
T Consensus       208 ~--~~~~~~~~~~~~~~~  223 (312)
T d1qyda_         208 D--DPQTLNKTMYIRPPM  223 (312)
T ss_dssp             T--CGGGSSSEEECCCGG
T ss_pred             c--CccccCceEEEeCCC
Confidence            4  334455554 44444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.28  E-value=6.7e-12  Score=113.37  Aligned_cols=207  Identities=9%  Similarity=0.021  Sum_probs=121.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH-----HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN-----ERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~-----~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++||||||||.||++++++|+++|++|++++|+.....     .....+.  ...+.++.+|+.+..+..+.++      
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh------
Confidence            48999999999999999999999999999999754321     1112222  3457788899999988777763      


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHH
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNG  165 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKa  165 (367)
                        ..+.++|+++....                   .+..++.+++.    ..+..++++.||............+...+.
T Consensus        76 --~~~~vi~~~~~~~~-------------------~~~~~~~~a~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  130 (307)
T d1qyca_          76 --NVDVVISTVGSLQI-------------------ESQVNIIKAIK----EVGTVKRFFPSEFGNDVDNVHAVEPAKSVF  130 (307)
T ss_dssp             --TCSEEEECCCGGGS-------------------GGGHHHHHHHH----HHCCCSEEECSCCSSCTTSCCCCTTHHHHH
T ss_pred             --hceeeeeccccccc-------------------chhhHHHHHHH----Hhccccceeeeccccccccccccccccccc
Confidence              47889998875321                   12223333332    233456777777655444444444444444


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhh---hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 035642          166 AMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAK---NKIVEGLVSRTPICRPGEPDEVSSLVAFLCFPAAS  242 (367)
Q Consensus       166 al~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~ai~~L~s~~~~  242 (367)
                      ........+..+.   |++...+.|+.+.++...........   ...............+..++|+|++++.++..  +
T Consensus       131 ~~~~~~~~~~~~~---~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~--~  205 (307)
T d1qyca_         131 EVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD--P  205 (307)
T ss_dssp             HHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC--G
T ss_pred             cccccccchhhcc---CCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC--h
Confidence            4444444444442   67778899988876533221110000   00000000111222367899999999998843  3


Q ss_pred             CccccEEE-eCCCc
Q 035642          243 YITGQVIC-VDGGM  255 (367)
Q Consensus       243 ~itG~~i~-vdgG~  255 (367)
                      ...|+.+. +.+|.
T Consensus       206 ~~~~~~~~~~~~~~  219 (307)
T d1qyca_         206 RTLNKTLYLRLPAN  219 (307)
T ss_dssp             GGTTEEEECCCGGG
T ss_pred             hhcCceeEEeCCCC
Confidence            23344443 34443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.24  E-value=1e-11  Score=112.26  Aligned_cols=129  Identities=20%  Similarity=0.203  Sum_probs=93.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||||||||.||++++++|.++|+.|++ +++...                 +.+|++|.+.++++++..      ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~-----------------~~~Dl~~~~~~~~~i~~~------~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE-----------------FCGDFSNPKGVAETVRKL------RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS-----------------SCCCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc-----------------ccCcCCCHHHHHHHHHHc------CCCE
Confidence            5999999999999999999999975544 443221                 236999999999888753      5899


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC-----------CCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA-----------PLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~-----------~~~~~Y  160 (367)
                      |||+||.......    .+.-+..+..|+.++.++..++.     ..+.+++++||.......           .....|
T Consensus        58 Vih~Aa~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          58 IVNAAAHTAVDKA----ESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             EEECCCCCCHHHH----TTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEEeccccccccc----ccCccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCCchH
Confidence            9999997643221    12235677899999999988873     334678888776554321           133579


Q ss_pred             HHHHHHHHHHHHH
Q 035642          161 GPYNGAMNQLTKH  173 (367)
Q Consensus       161 ~asKaal~~l~~~  173 (367)
                      +.+|.+.+.+.+.
T Consensus       129 ~~~k~~~e~~~~~  141 (298)
T d1n2sa_         129 GKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHh
Confidence            9999988776544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.24  E-value=1.8e-11  Score=114.17  Aligned_cols=208  Identities=12%  Similarity=0.039  Sum_probs=124.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcCCC
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ-REKLMETVSSIFQGK   88 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~   88 (367)
                      +++|+||||||+||.+++++|+++|++|+++.|+..+...  ..+. ....+.++.+|+.|..+ ++.++        ..
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a~--------~~   71 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTLF--------EG   71 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHHH--------TT
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHHh--------cC
Confidence            4599999999999999999999999999999998765432  2222 23468899999998654 44443        45


Q ss_pred             ccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC--CCCccHHHHHHH
Q 035642           89 LNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA--PLTPLYGPYNGA  166 (367)
Q Consensus        89 iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~--~~~~~Y~asKaa  166 (367)
                      .|.++++......                .++....+++.++.    +.+..++++.||.......  .....|..+|..
T Consensus        72 ~~~~~~~~~~~~~----------------~~~~~~~~~~~aa~----~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~  131 (350)
T d1xgka_          72 AHLAFINTTSQAG----------------DEIAIGKDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT  131 (350)
T ss_dssp             CSEEEECCCSTTS----------------CHHHHHHHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred             CceEEeecccccc----------------hhhhhhhHHHHHHH----HhCCCceEEEeeccccccCCcccchhhhhhHHH
Confidence            7877776543211                12334445555553    3345567778876554332  234467778877


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChhhhHHHHH-HhhcCCCC-----CCCC-HHHHHHHHHHHhCC
Q 035642          167 MNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPAKNKIVEG-LVSRTPIC-----RPGE-PDEVSSLVAFLCFP  239 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~p~~-----~~~~-~~dvA~ai~~L~s~  239 (367)
                      .+.+.+.       .+++...+.||+...+................. .....|..     .+.+ .+|+++++..++.+
T Consensus       132 ~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~  204 (350)
T d1xgka_         132 VENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  204 (350)
T ss_dssp             HHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhC
Confidence            6655443       357778888887655432211111000000000 00001111     0123 47999999888754


Q ss_pred             CCCCccccEEEeCCCc
Q 035642          240 AASYITGQVICVDGGM  255 (367)
Q Consensus       240 ~~~~itG~~i~vdgG~  255 (367)
                      ......|+++.+.|..
T Consensus       205 ~~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         205 GPQKWNGHRIALTFET  220 (350)
T ss_dssp             CHHHHTTCEEEECSEE
T ss_pred             ChhhcCCeEEEEeCCc
Confidence            3344579999987654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=5.2e-11  Score=107.87  Aligned_cols=216  Identities=13%  Similarity=0.083  Sum_probs=126.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ||||||||+||++++++|+++|+ .|+++++-... .+... +..  .    ..+|..+.+......... ..+ ..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~-~~~--~----~~~~~~~~~~~~~~~~~~-~~~-~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVN-LVD--L----NIADYMDKEDFLIQIMAG-EEF-GDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHH-HHT--S----CCSEEEEHHHHHHHHHTT-CCC-SSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhc-ccc--c----chhhhccchHHHHHHhhh-hcc-cchhh
Confidence            89999999999999999999997 57777632221 11111 111  1    112333333322222111 122 46889


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccC-----------CCCCccH
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTA-----------APLTPLY  160 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~-----------~~~~~~Y  160 (367)
                      ++|.|+......   ..   .+.....|+.++.+++.++...    +.. +++.||.....+           ......|
T Consensus        72 i~~~aa~~~~~~---~~---~~~~~~~~~~~~~~~l~~~~~~----~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          72 IFHEGACSSTTE---WD---GKYMMDNNYQYSKELLHYCLER----EIP-FLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             EEECCSCCCTTC---CC---HHHHHHHTHHHHHHHHHHHHHH----TCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhhhcccccccc---cc---cccccccccccccccccccccc----ccc-cccccccccccccccccccccccccccccc
Confidence            999998543321   12   2445677888888888776543    233 555555444332           2345679


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCCccccccCChh-hhHHHHHHhhc----------CCCCCCCCHHHH
Q 035642          161 GPYNGAMNQLTKHLECEQAKDNIRANSIAPGVIRTSLSDAIRHDPA-KNKIVEGLVSR----------TPICRPGEPDEV  229 (367)
Q Consensus       161 ~asKaal~~l~~~la~e~~~~gIrvn~I~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~----------~p~~~~~~~~dv  229 (367)
                      +.+|.+.+.+++.+..+   .++.+..+.|..+.+|.......... .......+...          .....+..++|+
T Consensus       141 ~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             ccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccH
Confidence            99999999999988765   37888999999888875432211111 11122222211          112245679999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCcc
Q 035642          230 SSLVAFLCFPAASYITGQVICVDGGMT  256 (367)
Q Consensus       230 A~ai~~L~s~~~~~itG~~i~vdgG~~  256 (367)
                      +.++..++.  ..  ....+.+.+|..
T Consensus       218 ~~~~~~~~~--~~--~~~~~~~~~~~~  240 (307)
T d1eq2a_         218 ADVNLWFLE--NG--VSGIFNLGTGRA  240 (307)
T ss_dssp             HHHHHHHHH--HC--CCEEEEESCSCC
T ss_pred             HHHHHHHhh--hc--cccccccccccc
Confidence            999998773  22  234667766643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.99  E-value=1.7e-14  Score=123.17  Aligned_cols=46  Identities=24%  Similarity=0.378  Sum_probs=42.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK   57 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~   57 (367)
                      ++.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            5788899999999999999999999999999999999998888754

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.06  E-value=3.3e-05  Score=63.22  Aligned_cols=80  Identities=20%  Similarity=0.299  Sum_probs=57.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|+| +|+||...+..+...|++|+++++++++.+.+.+ +   +....+. .|-. .++..+..+++.+..++.+|+
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~---ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GADVTLV-VDPA-KEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCSEEEE-CCTT-TSCHHHHHHHHHHHSSSCCSE
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c---CCcEEEe-cccc-ccccchhhhhhhcccccCCce
Confidence            999997 6899999999999999999999999988765433 2   4444332 2222 233445555565555457999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999983

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.95  E-value=1.6e-05  Score=66.22  Aligned_cols=76  Identities=9%  Similarity=0.144  Sum_probs=54.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+||+|.+.++.....|++|+.+++++++.+.+.+    .+....+   |-.+++..+.+.+...   +..+|+
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~Ga~~vi---~~~~~~~~~~~~~~~~---~~Gvd~  101 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFDAAF---NYKTVNSLEEALKKAS---PDGYDC  101 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEE---ETTSCSCHHHHHHHHC---TTCEEE
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----hhhhhhc---ccccccHHHHHHHHhh---cCCCce
Confidence            99999999999999999999999999999999877544332    3544433   3344433333333321   146999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++++.|
T Consensus       102 v~D~vG  107 (182)
T d1v3va2         102 YFDNVG  107 (182)
T ss_dssp             EEESSC
T ss_pred             eEEecC
Confidence            999998

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.8e-05  Score=65.28  Aligned_cols=76  Identities=14%  Similarity=0.261  Sum_probs=54.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+|++|...++.....|++|+++++++++.+.+. +   .|....   .|.++++-.+++.+...   +..+|+
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~---~Ga~~v---i~~~~~~~~~~i~~~t~---~~g~d~  100 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-Q---NGAHEV---FNHREVNYIDKIKKYVG---EKGIDI  100 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCSEE---EETTSTTHHHHHHHHHC---TTCEEE
T ss_pred             EEEEEeccccccccccccccccCccccccccccccccccc-c---cCcccc---cccccccHHHHhhhhhc---cCCceE
Confidence            9999999999999999999999999999999887665443 2   254432   36666554444333321   135999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus       101 v~d~~g  106 (174)
T d1yb5a2         101 IIEMLA  106 (174)
T ss_dssp             EEESCH
T ss_pred             Eeeccc
Confidence            999876

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.79  E-value=6.8e-05  Score=61.25  Aligned_cols=73  Identities=11%  Similarity=0.124  Sum_probs=55.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++|+|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+.+    ........+..+.....+.+        ...|
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i--------~~~~   69 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AKHD   69 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHH--------TTSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhh--------hccc
Confidence            58899887 99999999999999999999999999888776543    34445555777766666665        3456


Q ss_pred             EEEEcC
Q 035642           91 LLVNNA   96 (367)
Q Consensus        91 ~lI~~A   96 (367)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            666544

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=3.6e-05  Score=63.50  Aligned_cols=78  Identities=13%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|+|+||+|++|..+++.....|++|+.+++++++.+.+.+ +   |....   +|-++++-.+++.+ +..  +..+|
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l---Ga~~v---i~~~~~d~~~~v~~-~t~--g~g~d   99 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQV---INYREEDLVERLKE-ITG--GKKVR   99 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HTT--TCCEE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c---CCeEE---EECCCCCHHHHHHH-HhC--CCCeE
Confidence            399999999999999999999999999999999988765543 3   54432   36666554444332 221  24699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +++.+.|.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99999873

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=0.00036  Score=56.89  Aligned_cols=77  Identities=16%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|.|+ |++|...+..+...|+ +|+++++++++++.+ +++   |...... .+-.+....   .+.+...++..+|
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~~~~~-~~~~~~~~~---~~~~~~~~g~g~D   99 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADLVLQ-ISKESPQEI---ARKVEGQLGCKPE   99 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSEEEE-CSSCCHHHH---HHHHHHHHTSCCS
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCccccc-ccccccccc---cccccccCCCCce
Confidence            9999987 9999999999999999 799999999887654 333   4443322 233344333   3344444435799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.+.|
T Consensus       100 vvid~~G  106 (171)
T d1pl8a2         100 VTIECTG  106 (171)
T ss_dssp             EEEECSC
T ss_pred             EEEeccC
Confidence            9999998

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.66  E-value=5.8e-05  Score=62.39  Aligned_cols=77  Identities=21%  Similarity=0.268  Sum_probs=54.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      .+|||+||+|++|..+++.+...|++|+++++++++.+.+    ++.|....   .|-.+++-.+++.+ ...  +.++|
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~~v---i~~~~~~~~~~v~~-~t~--~~g~d   96 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEYV---GDSRSVDFADEILE-LTD--GYGVD   96 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSEE---EETTCSTHHHHHHH-HTT--TCCEE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccccc---ccCCccCHHHHHHH-HhC--CCCEE
Confidence            3999999999999999999989999999999988765433    33354432   25555443333322 211  13699


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999998

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.66  E-value=5.8e-05  Score=63.05  Aligned_cols=86  Identities=17%  Similarity=0.193  Sum_probs=59.0

Q ss_pred             CeEEE-EcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFI-TGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLV-TGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+++| +||+||+|.+.++-....|++|+.+.|+.++.++..+.+++.|....+.. |-.+..++.+.+.++....++++
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccCCc
Confidence            35555 79999999999988888999999999988877777766666676554322 11111233334444443333679


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++++.|
T Consensus       109 dvv~D~vg  116 (189)
T d1gu7a2         109 KLALNCVG  116 (189)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999877

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=0.00024  Score=58.81  Aligned_cols=83  Identities=18%  Similarity=0.197  Sum_probs=61.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH---HHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQ---EWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~---~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      .++++ +|+|.|+ ||.|++++..|++.|. +++++.|+.++.+++.+   .+..... .....+|+.+.+++....   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~---   88 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTVTDLADQQAFAEAL---   88 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC-cceEeeecccccchhhhh---
Confidence            34566 9999998 7999999999999998 79999999776655443   3433322 334456899888776655   


Q ss_pred             HHHcCCCccEEEEcCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~   99 (367)
                           ...|++||+..+.
T Consensus        89 -----~~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 -----ASADILTNGTKVG  101 (182)
T ss_dssp             -----HTCSEEEECSSTT
T ss_pred             -----cccceeccccCCc
Confidence                 3589999998764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.59  E-value=8.7e-05  Score=58.14  Aligned_cols=72  Identities=13%  Similarity=0.048  Sum_probs=57.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+++     ...++..|.+|++.++++--       ...|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-------~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGI-------EDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-------hhhhh
Confidence            5899998 99999999999999999999999998887765542     34577889999998776621       45677


Q ss_pred             EEEcC
Q 035642           92 LVNNA   96 (367)
Q Consensus        92 lI~~A   96 (367)
                      ++...
T Consensus        69 vv~~t   73 (132)
T d1lssa_          69 YIAVT   73 (132)
T ss_dssp             EEECC
T ss_pred             hcccC
Confidence            77653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.52  E-value=0.00012  Score=60.09  Aligned_cols=71  Identities=15%  Similarity=0.274  Sum_probs=51.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|+||+|++|...++.+...|++|+.+++++++.+.+.+    .|.+..+   |..+.      .+++.. . .++|+
T Consensus        30 ~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----lGa~~~i---~~~~~------~~~~~~-~-~g~D~   94 (171)
T d1iz0a2          30 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAEEAA---TYAEV------PERAKA-W-GGLDL   94 (171)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCSEEE---EGGGH------HHHHHH-T-TSEEE
T ss_pred             EEEEEeccccchhhhhhhhcccccccccccccccccccccc----cccceee---ehhhh------hhhhhc-c-ccccc
Confidence            99999999999999999988999999999999877654432    2544322   43321      122222 2 57999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            999876

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.49  E-value=0.0012  Score=52.37  Aligned_cols=112  Identities=13%  Similarity=0.065  Sum_probs=67.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFG--AIIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G--~~Vi~~~R~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +.++.|.|+ |.+|..+|..|+.+|  ..|+++++++++++....++...   .........|.   +           .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------H
Confidence            338999996 999999999999988  48999999998877666666532   22233344342   1           1


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                      . ..-|++|.+||.....      ...-.+.+..|..-...+.+.+.++   ...+.++++|
T Consensus        70 ~-~~adivvitag~~~~~------g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvt  121 (146)
T d1ez4a1          70 C-KDADLVVITAGAPQKP------GESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (146)
T ss_dssp             G-TTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             h-ccccEEEEecccccCC------CCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeC
Confidence            1 4589999999964322      1223345566655444444444332   3345555555

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.49  E-value=0.00016  Score=58.70  Aligned_cols=73  Identities=12%  Similarity=0.212  Sum_probs=55.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++++ +++|.|+ |++|+.+++.|...|+ +|.++.|+.++++++.+++.   ...  .  +   .+++.+.+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~--~--~---~~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--V--R---FDELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--C--C---GGGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc--c--c---chhHHHHh-------
Confidence            3555 9999998 9999999999999998 69999999999998888773   221  1  2   23333333       


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                       ...|++|++.+..
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             4689999998843

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=8e-05  Score=52.70  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=36.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERL   51 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~   51 (367)
                      +++|+||+||+|...++.+...|++|+.+.+++++.+.+.
T Consensus        34 ~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            8999999999999999988899999999999998876553

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.44  E-value=0.00034  Score=57.70  Aligned_cols=78  Identities=15%  Similarity=0.159  Sum_probs=53.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ-GKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~-g~i   89 (367)
                      +|+|+|| |+||...+..+...|+ +|+++++++++.+.+ +++   |....+   |.++.+ ..+..+++.+..+ ..+
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~vi---~~~~~~-~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADLTL---NRRETS-VEERRKAIMDITHGRGA  101 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSEEE---ETTTSC-HHHHHHHHHHHTTTSCE
T ss_pred             EEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceEEE---eccccc-hHHHHHHHHHhhCCCCc
Confidence            9999997 8999999999999998 899999999887644 333   444332   433321 2222333333321 359


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|.+.|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=6.6e-05  Score=62.09  Aligned_cols=103  Identities=16%  Similarity=0.165  Sum_probs=66.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+||+|...++-....|++|+.+++++++.+.+.+    .|.+..+   |-.+  ...+...   ...++++|+
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~----lGa~~vi---~~~~--~~~~~~~---~~~~~gvD~  101 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAKEVL---ARED--VMAERIR---PLDKQRWAA  101 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCSEEE---ECC--------------CCSCCEEE
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh----cccceee---ecch--hHHHHHH---HhhccCcCE
Confidence            89999999999999999888999999999999888655432    2554432   3222  1122222   212257999


Q ss_pred             EEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCC
Q 035642           92 LVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAA  154 (367)
Q Consensus        92 lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~  154 (367)
                      ++.+.|..        +   |.               ..+..++  .+||||.+++..+....
T Consensus       102 vid~vgg~--------~---~~---------------~~l~~l~--~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         102 AVDPVGGR--------T---LA---------------TVLSRMR--YGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EEECSTTT--------T---HH---------------HHHHTEE--EEEEEEECSCCSSSCCC
T ss_pred             EEEcCCch--------h---HH---------------HHHHHhC--CCceEEEeecccCcccC
Confidence            99999842        1   11               1233333  36999999987665543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.32  E-value=0.00043  Score=56.26  Aligned_cols=77  Identities=9%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +++|+|++|++|..++..+...|+ +|+++++++++.+.+.+ +   |....   .|-++++..++..+..   .++.+|
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~~~---i~~~~~~~~~~~~~~~---~~~~~d   99 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GADYV---INASMQDPLAEIRRIT---ESKGVD   99 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHT---TTSCEE
T ss_pred             EEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCcee---eccCCcCHHHHHHHHh---hcccch
Confidence            999999999999999999998895 89999999887655433 3   44432   2445544444444332   224699


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +++.++|.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999983

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00049  Score=56.20  Aligned_cols=75  Identities=11%  Similarity=0.223  Sum_probs=57.0

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.++ +|+|.|| ||.+++++..|.+.|++|.++.|+.++++++.+.+...+ .+..+  +..+.            .. 
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~~-   77 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------EG-   77 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------TT-
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------cc-
Confidence            4555 9999997 899999999999999999999999999999888876543 33332  22211            01 


Q ss_pred             CCccEEEEcCCCC
Q 035642           87 GKLNLLVNNAAVA   99 (367)
Q Consensus        87 g~iD~lI~~Ag~~   99 (367)
                      ...|++||+..+.
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            4689999998664

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.25  E-value=0.0013  Score=53.61  Aligned_cols=77  Identities=14%  Similarity=0.225  Sum_probs=57.3

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +.++ +|+|.|+ ||.|++++..|.+.+.+|.++.|+.++++.+.+.+.... .+.....|-.+              . 
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~~--------------~-   77 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--------------L-   77 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC--------------C-
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhcccc--------------c-
Confidence            4555 8888876 888999999999988899999999999999998886533 44444443111              1 


Q ss_pred             CCccEEEEcCCCCCC
Q 035642           87 GKLNLLVNNAAVAVP  101 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~  101 (367)
                      ...|++||+......
T Consensus        78 ~~~diiIN~tp~g~~   92 (171)
T d1p77a1          78 QTYDLVINATSAGLS   92 (171)
T ss_dssp             SCCSEEEECCCC---
T ss_pred             cccceeeeccccccc
Confidence            568999999886543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.00032  Score=58.24  Aligned_cols=77  Identities=12%  Similarity=0.166  Sum_probs=53.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+|||+||+||+|...++-....|++ |+.+++++++...+.+++   +....   .|..+++. .+.++++.   +..+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~~-~~~~~~~~---~~Gv  101 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGNV-AEQLREAC---PGGV  101 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSCH-HHHHHHHC---TTCE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchhH-HHHHHHHh---ccCc
Confidence            38999999999999999988889985 555677777666665554   43332   25555433 33333332   2469


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |+++.+.|
T Consensus       102 Dvv~D~vG  109 (187)
T d1vj1a2         102 DVYFDNVG  109 (187)
T ss_dssp             EEEEESSC
T ss_pred             eEEEecCC
Confidence            99999987

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.18  E-value=0.0017  Score=51.44  Aligned_cols=116  Identities=18%  Similarity=0.114  Sum_probs=72.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++.|+||+|.+|.++|..|+.+|.  ++++.+.++.+++.  .++....... ....-+ ...+..+.+        ..-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~-~~~~~~-~~~~~~~~~--------~~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRA-TVKGYL-GPEQLPDCL--------KGC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSC-EEEEEE-SGGGHHHHH--------TTC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhc-CCCeEE-cCCChHHHh--------CCC
Confidence            588999999999999999999986  69999988765443  3443322111 111111 122222322        468


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      |++|.+||.....   ..+.   .+.+..|..-.-.+.+.+.++   ...+.|+++|..
T Consensus        70 DivVitag~~~~~---g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNP  119 (144)
T d1mlda1          70 DVVVIPAGVPRKP---GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNP  119 (144)
T ss_dssp             SEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CEEEECCCcCCCC---CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            9999999964322   1122   245677777776666666554   335777777653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.15  E-value=0.0022  Score=50.93  Aligned_cols=111  Identities=14%  Similarity=0.098  Sum_probs=71.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +|.|+|| |.+|.++|..|+.+|.  +++++++++++++....++...    .........|.   ++           .
T Consensus         8 KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~-----------l   72 (148)
T d1ldna1           8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD-----------C   72 (148)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG-----------T
T ss_pred             eEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH-----------h
Confidence            8999997 9999999999999885  7999999998877776666542    22233333332   11           1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                       ..-|++|.+||......  . +.   .+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus        73 -~daDvvvitag~~~~~~--~-~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvtN  124 (148)
T d1ldna1          73 -RDADLVVICAGANQKPG--E-TR---LDLVDKNIAIFRSIVESVMAS---GFQGLFLVATN  124 (148)
T ss_dssp             -TTCSEEEECCSCCCCTT--T-CS---GGGHHHHHHHHHHHHHHHHHH---TCCSEEEECSS
T ss_pred             -ccceeEEEecccccccC--c-ch---hHHHHHHHHHHHHHHHHHHhh---CCCceEEEecC
Confidence             45799999999754321  1 11   234455655445555555443   34577777654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00021  Score=59.03  Aligned_cols=39  Identities=21%  Similarity=0.318  Sum_probs=35.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      ++||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            899999999999999998889999999999999887554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.05  E-value=0.00073  Score=55.34  Aligned_cols=76  Identities=9%  Similarity=0.069  Sum_probs=52.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|.|+ |+||...++.+...|+ +|+++++++++.+.+. ++   |....   +|..+++..+++.+.. .  +..+|
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~~~---i~~~~~~~~~~v~~~t-~--g~G~D   98 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GATDI---LNYKNGHIEDQVMKLT-N--GKGVD   98 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCSEE---ECGGGSCHHHHHHHHT-T--TSCEE
T ss_pred             EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Ccccc---ccccchhHHHHHHHHh-h--ccCcc
Confidence            9999986 8999999999999998 7999999988865543 33   43332   2444433333333222 1  13599


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|.++|.
T Consensus        99 ~vid~~g~  106 (174)
T d1jqba2          99 RVIMAGGG  106 (174)
T ss_dssp             EEEECSSC
T ss_pred             eEEEccCC
Confidence            99999994

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.02  E-value=0.0023  Score=52.11  Aligned_cols=74  Identities=14%  Similarity=0.200  Sum_probs=50.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|.|+ |+||...+..+...|++ |+++++++++++.+. ++   |... +  .|..+++.. +.++   +..++++|
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~---Ga~~-~--i~~~~~~~~-~~i~---~~t~gg~D   98 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GATH-V--INSKTQDPV-AAIK---EITDGGVN   98 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCSE-E--EETTTSCHH-HHHH---HHTTSCEE
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc---CCeE-E--EeCCCcCHH-HHHH---HHcCCCCc
Confidence            9999997 89999999988888985 566778887765543 34   4332 2  255553332 2222   22336799


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.+.|
T Consensus        99 ~vid~~G  105 (174)
T d1f8fa2          99 FALESTG  105 (174)
T ss_dssp             EEEECSC
T ss_pred             EEEEcCC
Confidence            9999998

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.99  E-value=0.0049  Score=49.10  Aligned_cols=116  Identities=10%  Similarity=0.040  Sum_probs=67.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---------EEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA---------IIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~---------~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.|+||+|.+|.+++-.|+..+.         .++...++.++++....++... ......+... ++.   .+.+   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~---   78 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT-DDP---KVAF---   78 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC-Cch---hhhc---
Confidence            799999999999999999997663         2333445556666555555433 2223333322 111   1222   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                           ...|++|.+||.....   ..+.+   +.+..|+.-.-.+.+.+.++  ....+.|+.+|-
T Consensus        79 -----~~advViitaG~~~~p---g~~r~---dl~~~N~~i~~~~~~~i~k~--a~~~~~vivvsN  131 (154)
T d1y7ta1          79 -----KDADYALLVGAAPRKA---GMERR---DLLQVNGKIFTEQGRALAEV--AKKDVKVLVVGN  131 (154)
T ss_dssp             -----TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH--SCTTCEEEECSS
T ss_pred             -----ccccEEEeecCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh--CCCCcEEEEecC
Confidence                 5689999999975332   22333   34556665555555555443  123456666653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.002  Score=52.04  Aligned_cols=71  Identities=13%  Similarity=0.246  Sum_probs=51.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|+ |+||...++.+...|+++++++++.++.+. .+++   |....   .|..+.+.....       . +.+|+
T Consensus        33 ~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l---Gad~~---i~~~~~~~~~~~-------~-~~~D~   96 (168)
T d1uufa2          33 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GADEV---VNSRNADEMAAH-------L-KSFDF   96 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCSEE---EETTCHHHHHTT-------T-TCEEE
T ss_pred             EEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc---CCcEE---EECchhhHHHHh-------c-CCCce
Confidence            9999986 999999998888999999999999887643 3444   44432   365655433221       1 57999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      +|.+.|.
T Consensus        97 vid~~g~  103 (168)
T d1uufa2          97 ILNTVAA  103 (168)
T ss_dssp             EEECCSS
T ss_pred             eeeeeec
Confidence            9999984

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.97  E-value=0.011  Score=48.19  Aligned_cols=115  Identities=12%  Similarity=0.036  Sum_probs=65.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---C----EEEEEeCCh--hHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG---A----IIHTCSRNQ--TELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G---~----~Vi~~~R~~--~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.||||+|.||.+++-.|++.+   .    .+.+.+.+.  +.++...-++.... .....+.. -++.   .+.    
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~---~~~----   97 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP---YEV----   97 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH---HHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc---hhh----
Confidence            79999999999999999999753   2    455555544  34455554544321 12222211 1121   122    


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                         + ...|++|-.||.....   ..+.   .+.+..|..-.-.+.+++.++-  .+...|+.+|
T Consensus        98 ---~-~~aDvVvi~ag~~rkp---g~tR---~Dll~~N~~I~k~~~~~i~~~a--~~~~~vlvv~  150 (175)
T d7mdha1          98 ---F-EDVDWALLIGAKPRGP---GMER---AALLDINGQIFADQGKALNAVA--SKNVKVLVVG  150 (175)
T ss_dssp             ---T-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             ---c-cCCceEEEeeccCCCC---CCcH---HHHHHHHHHHHHHHHHHHHhhC--CCCcEEEEec
Confidence               2 5689999999975322   2233   3456667655555555555441  2245566554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.96  E-value=0.00085  Score=54.80  Aligned_cols=77  Identities=14%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|.|+ ||+|...+..+...|+ +|+.+++++++.+...+.    +....+...|-  .+.+.+..+...   ++.+|
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~----Ga~~~i~~~~~--~~~~~~~~~~~~---~~G~D  100 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GATECVNPQDY--KKPIQEVLTEMS---NGGVD  100 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSEEECGGGC--SSCHHHHHHHHT---TSCBS
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh----CCeeEEecCCc--hhHHHHHHHHHh---cCCCC
Confidence            9999999 7899999999999986 899999999887654332    43332221121  233444444332   25799


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2jhfa2         101 FSFEVIGR  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEecCCc
Confidence            99999984

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.95  E-value=0.0028  Score=51.77  Aligned_cols=76  Identities=11%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ-REKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~i   89 (367)
                      +|+|+|+ ||+|...+..+...|+ +|+++++++++++...+ +   |....+   |-.+.+. .+...+.. .  ++.+
T Consensus        32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~---GA~~~i---n~~~~~~~~~~~~~~~-~--g~G~  100 (176)
T d1d1ta2          32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V---GATECI---SPKDSTKPISEVLSEM-T--GNNV  100 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H---TCSEEE---CGGGCSSCHHHHHHHH-H--TSCC
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c---CCcEEE---CccccchHHHHHHHHh-c--cccc
Confidence            9999986 9999999999999996 89999999999875443 3   544433   2222222 22222222 1  2579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999983

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.93  E-value=0.0045  Score=49.63  Aligned_cols=73  Identities=18%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|+ |++|...+..+...|++|+.+++++++++... ++   |....   .|.++.+..+++.+    .. ...|.
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~---Ga~~~---i~~~~~~~~~~~~~----~~-~g~~~   96 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL---GASLT---VNARQEDPVEAIQR----DI-GGAHG   96 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSEE---EETTTSCHHHHHHH----HH-SSEEE
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc---Ccccc---ccccchhHHHHHHH----hh-cCCcc
Confidence            9999886 99999999988899999999999988876543 22   44432   25555544444332    22 34555


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|-+++
T Consensus        97 ~i~~~~  102 (166)
T d1llua2          97 VLVTAV  102 (166)
T ss_dssp             EEECCS
T ss_pred             cccccc
Confidence            555555

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.92  E-value=0.0021  Score=51.97  Aligned_cols=74  Identities=20%  Similarity=0.162  Sum_probs=50.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +++|.|+ |++|...++.+...|++|+++++++++++.+. ++   |.+..+...+-.+   .   .++   .. +.+|.
T Consensus        30 ~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i~~~~~~~---~---~~~---~~-~~~d~   94 (168)
T d1piwa2          30 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYIATLEEGD---W---GEK---YF-DTFDL   94 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEEEGGGTSC---H---HHH---SC-SCEEE
T ss_pred             EEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEeeccchHH---H---HHh---hh-cccce
Confidence            9999987 89999998888788999999999998876543 33   5443332222111   1   111   12 57999


Q ss_pred             EEEcCCCCC
Q 035642           92 LVNNAAVAV  100 (367)
Q Consensus        92 lI~~Ag~~~  100 (367)
                      ++.+.|...
T Consensus        95 vi~~~~~~~  103 (168)
T d1piwa2          95 IVVCASSLT  103 (168)
T ss_dssp             EEECCSCST
T ss_pred             EEEEecCCc
Confidence            999887543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.90  E-value=0.00036  Score=56.92  Aligned_cols=74  Identities=20%  Similarity=0.193  Sum_probs=51.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|||+||+||+|.+.++-....|++|+.+++++++.+.+.+.    +.....   |   .++.  ..+......++++|+
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l----Gad~vi---~---~~~~--~~~~~~~~~~~gvd~   93 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVI---S---REDV--YDGTLKALSKQQWQG   93 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEE---E---HHHH--CSSCCCSSCCCCEEE
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh----cccceE---e---ccch--hchhhhcccCCCceE
Confidence            899999999999999988888999999999999887665433    544432   2   1111  011111112246999


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++.+.|
T Consensus        94 vid~vg   99 (167)
T d1tt7a2          94 AVDPVG   99 (167)
T ss_dssp             EEESCC
T ss_pred             EEecCc
Confidence            999987

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.88  E-value=0.005  Score=49.14  Aligned_cols=118  Identities=9%  Similarity=-0.006  Sum_probs=71.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      .++.|.|+ |.+|..+|..++..|. ++++.+.++++++....++...    +........  ++.   ++.+       
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~-------   74 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAAL-------   74 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHH-------
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhh-------
Confidence            38999997 9999999998888885 8999999988777666666431    212111111  111   1222       


Q ss_pred             CCCccEEEEcCCCCCCCCc--cCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEA--LDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~--~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                       ..-|++|.+||......-  .+.+.   .+.+..|..-...+.+.+.++   ...+.++++|..
T Consensus        75 -~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~---~p~aiviivsNP  132 (154)
T d1pzga1          75 -TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTNP  132 (154)
T ss_dssp             -TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             -cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeCCc
Confidence             457999999997543211  11121   234555655555555555443   335667766653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.017  Score=46.17  Aligned_cols=114  Identities=11%  Similarity=0.038  Sum_probs=70.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHH
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +++ +|.|+|+ |.+|.++|..|+.+|.  .++++++++++++..+.++...    +........|..+           
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~-----------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV-----------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh-----------
Confidence            444 7888896 9999999999999986  7999999998888777777642    2222222223221           


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                         . ..-|++|.+||.......   +.   .+.+..|..-...+.+.+..   ....+.++++|-
T Consensus        85 ---~-~~adivvitag~~~~~~~---~R---~dll~~N~~i~~~i~~~i~~---~~p~~ivivvtN  137 (159)
T d2ldxa1          85 ---S-ANSKLVIITAGARMVSGQ---TR---LDLLQRNVAIMKAIVPGVIQ---NSPDCKIIVVTN  137 (159)
T ss_dssp             ---G-TTEEEEEECCSCCCCTTT---CS---SCTTHHHHHHHHHHTTTHHH---HSTTCEEEECSS
T ss_pred             ---h-ccccEEEEecccccCCCC---CH---HHHHHHHHHHHHHHHHHHhc---cCCCeEEEEeCC
Confidence               1 468999999997543211   11   12244454433333333332   234567777665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.76  E-value=0.008  Score=47.43  Aligned_cols=115  Identities=14%  Similarity=0.120  Sum_probs=67.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++.|+|+ |.+|.++|-.|+.+|.  ++++.++++++++....++...    +........|.   ++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            46788895 9999999999999884  7999999998877666666532    22233333232   11           


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS  147 (367)
                      . ..-|++|.+||......  +.....-.+.+..|..    +.+.+.+.+.+. ..+.++++|-
T Consensus        67 l-~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 L-ADADVVISTLGNIKLQQ--DNPTGDRFAELKFTSS----MVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             G-TTCSEEEECCSCGGGTC---------CTTHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             h-ccccEEEEecccccccc--ccCCccHHHHHHHHHH----HHHHHHHHHhhcCCCeEEEEecC
Confidence            1 35799999999643210  0011111233445543    344444444433 3566666654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.76  E-value=0.01  Score=46.61  Aligned_cols=111  Identities=12%  Similarity=0.029  Sum_probs=66.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCC--hhHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRN--QTELNERLQEWKL---KGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~--~~~~~~~~~~l~~---~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.|+||+|.+|.++|..++.+|.  .+++.+.+  ++.++....++..   ..........|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            588999999999999999999986  69999864  3444444444543   122333333332   21           


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCC-CCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASG-NGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~-~g~IV~iSS  147 (367)
                      . ..-|++|.+||.....   ..+.   .+.+..|..    +.+.+.+.+.+.. .+.++.+|-
T Consensus        68 ~-~~aDiVvitaG~~~~~---g~~R---~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 T-AGSDVVVITAGIPRQP---GQTR---IDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             G-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             h-hhcCEEEEeccccccc---CCch---hhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence            1 4579999999964322   1232   345566654    4444455544443 456666643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.72  E-value=0.0008  Score=52.29  Aligned_cols=72  Identities=14%  Similarity=0.244  Sum_probs=54.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .++|.|+ |-+|+++++.|.++|+.|++++.+++..+++.+    .+  ...+.+|.++++.+.++-  +     ...|.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~~--~~~~~gd~~~~~~l~~a~--i-----~~a~~   67 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YA--THAVIANATEENELLSLG--I-----RNFEY   67 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----TC--SEEEECCTTCTTHHHHHT--G-----GGCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----hC--CcceeeecccchhhhccC--C-----ccccE
Confidence            4677777 799999999999999999999999988766532    23  235568999988776651  1     35677


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|-..+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            776655

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.68  E-value=0.024  Score=44.42  Aligned_cols=112  Identities=13%  Similarity=0.090  Sum_probs=69.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|+|+ |.+|.++|..++.+|.  ++++.++++++++....++...   .........+  +.+   + +        
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~---~-~--------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE---I-C--------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG---G-G--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH---H-h--------
Confidence            5778897 9999999999999986  7999999998877666666542   1122222221  111   1 1        


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..-|++|.+||.....   ..+..   +.+..|..=...+.+.+.++   ...+.++++|-
T Consensus        68 ~daDvVVitaG~~~~~---g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQKP---GQSRL---ELVGATVNILKAIMPNLVKV---APNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             hCCcEEEEecccccCC---CCchh---hhhhhhHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            3479999999975322   22332   45566665555555554443   33466666653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.68  E-value=0.0041  Score=50.63  Aligned_cols=76  Identities=12%  Similarity=0.123  Sum_probs=51.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGK   88 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~   88 (367)
                      .+|+|.|+ |+||...+..+...|+ +|+++++++++++.. +++   |....+   |..+ ++......+...   ++.
T Consensus        30 ~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~---Ga~~~i---~~~~~~~~~~~~~~~~~---~~G   98 (174)
T d1e3ia2          30 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATDCL---NPRELDKPVQDVITELT---AGG   98 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEEE---CGGGCSSCHHHHHHHHH---TSC
T ss_pred             CEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh---CCCccc---CCccchhhhhhhHhhhh---cCC
Confidence            39999975 9999999999999998 688899998886443 333   443322   2221 123333333332   267


Q ss_pred             ccEEEEcCC
Q 035642           89 LNLLVNNAA   97 (367)
Q Consensus        89 iD~lI~~Ag   97 (367)
                      +|++|.++|
T Consensus        99 ~d~vie~~G  107 (174)
T d1e3ia2          99 VDYSLDCAG  107 (174)
T ss_dssp             BSEEEESSC
T ss_pred             CcEEEEecc
Confidence            999999999

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.68  E-value=0.0089  Score=46.92  Aligned_cols=111  Identities=12%  Similarity=0.011  Sum_probs=64.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|+ |.+|.+++-.++.+|.  .++++++++++++....++....   ........|   .+           .. 
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~-   66 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DV-   66 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GG-
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------Hh-
Confidence            5778897 9999999999999986  79999999987766666665421   122222111   11           12 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                      ..-|++|.+||.....      .+.-.+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus        67 ~~adivvitag~~~~~------~~~r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKP------GETRLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC------------CHHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCCceEEEecccccCc------CcchhHHhhHHHHHHHHHHHHhhcc---CCCceEEEecC
Confidence            4579999999965321      1122345566665544454444433   33566666654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.63  E-value=0.002  Score=52.57  Aligned_cols=76  Identities=13%  Similarity=0.158  Sum_probs=52.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSRE-QREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~-sv~~~~~~~~~~~~g~i   89 (367)
                      +|+|.|+ ||+|...+..+...|+ +|+.+++++++++...+ +   |....+   |.++.+ .+.+.....   .++.+
T Consensus        30 ~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l---Ga~~~i---~~~~~d~~~~~~~~~~---~~~G~   98 (174)
T d1p0fa2          30 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GATECL---NPKDYDKPIYEVICEK---TNGGV   98 (174)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TCSEEE---CGGGCSSCHHHHHHHH---TTSCB
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c---CCcEEE---cCCCchhHHHHHHHHh---cCCCC
Confidence            9999986 9999999999999997 79999999988865533 2   544332   333222 223333222   22579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |++|-+.|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999983

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.63  E-value=0.002  Score=52.25  Aligned_cols=75  Identities=15%  Similarity=0.181  Sum_probs=50.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS-REQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd-~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|+|.|+ ||+|...+..+...|+ +|+.+++++++.+. .+++   |....+   |..+ .+.+.+..+..   .++.+
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~~i---~~~~~~~~~~~~~~~~---~~~g~   99 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATECI---NPQDFSKPIQEVLIEM---TDGGV   99 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSEEE---CGGGCSSCHHHHHHHH---TTSCB
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcEEE---eCCchhhHHHHHHHHH---cCCCC
Confidence            9999998 6999999999999997 67778888877654 4444   443322   2221 23344444333   22579


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |++|.+.|
T Consensus       100 D~vid~~G  107 (176)
T d2fzwa2         100 DYSFECIG  107 (176)
T ss_dssp             SEEEECSC
T ss_pred             cEeeecCC
Confidence            99999998

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.63  E-value=0.022  Score=45.56  Aligned_cols=112  Identities=14%  Similarity=0.099  Sum_probs=70.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|.|+ |.+|.++|..|+.+|.  .+++++++++.++..+.++...    +........|..+              .
T Consensus        22 KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~--------------~   86 (160)
T d1i0za1          22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV--------------T   86 (160)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------------G
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------------c
Confidence            8999996 9999999999999996  7999999998887777777542    2222222223222              1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                       ..-|++|.+||.....   ..+.   .+.+..|..-...+...+.++   ...+-++++|-.
T Consensus        87 -~~adiVVitAg~~~~~---g~tR---~~l~~~N~~i~~~i~~~i~~~---~p~aiiivvtNP  139 (160)
T d1i0za1          87 -ANSKIVVVTAGVRQQE---GESR---LNLVQRNVNVFKFIIPQIVKY---SPDCIIIVVSNP  139 (160)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             -ccccEEEEecCCcccc---Ccch---HHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeCCc
Confidence             4579999999975332   1122   234455554444444443332   335667776653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.60  E-value=0.0052  Score=48.55  Aligned_cols=78  Identities=18%  Similarity=0.179  Sum_probs=53.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++.|.||.|-+|..+|+.|.++|++|.+.+|+.....+..    ..+........+   ..++...+.++.... .+=.+
T Consensus        11 kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~v~~~~~~~~-~~~~i   82 (152)
T d2pv7a2          11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVP---INLTLETIERLKPYL-TENML   82 (152)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSC---GGGHHHHHHHHGGGC-CTTSE
T ss_pred             eEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccc---hhhheeeeecccccc-cCCce
Confidence            8999999999999999999999999999999876544322    124455544434   445666666665544 22235


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++..++
T Consensus        83 iiD~~S   88 (152)
T d2pv7a2          83 LADLTS   88 (152)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            566555

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.60  E-value=0.014  Score=45.85  Aligned_cols=111  Identities=15%  Similarity=0.103  Sum_probs=67.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChh--HHHHHHHHHHhc----CC--cEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQT--ELNERLQEWKLK----GL--KVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~--~~~~~~~~l~~~----~~--~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.|+||+|.+|.++|..|+.+|.  ++++++++++  +++....++...    ..  ++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            588999999999999999999994  8999998863  444444454431    11  22222221  111         


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                        .. ..-|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++    ....|+.+|
T Consensus        71 --~l-~~aDvVVitAG~~~~~---g~sR---~dl~~~Na~iv~~i~~~i~~~----~~~~iivVt  122 (145)
T d1hyea1          71 --II-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVIT  122 (145)
T ss_dssp             --GG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECS
T ss_pred             --Hh-ccceEEEEecccccCC---CCCh---hhhhhhhHHHHHHHHHHHhcc----CCCeEEEEc
Confidence              11 4589999999974322   2232   345666766555555555444    234455553

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.004  Score=52.95  Aligned_cols=79  Identities=24%  Similarity=0.200  Sum_probs=53.7

Q ss_pred             CCCC-eEEEEcCC----------------ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCC
Q 035642            8 SNEQ-NYFITGGT----------------RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSS   70 (367)
Q Consensus         8 ~~~~-~vLVTGas----------------~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd   70 (367)
                      +++| +||||+|.                |-.|.++|+++..+|++|.++.-....         .....+..+  .+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~t   71 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVMT   71 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECCS
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eehh
Confidence            4667 89998874                889999999999999999887654321         012234333  4445


Q ss_pred             HHHHHHHHHHHHHHcCCCccEEEEcCCCCCC
Q 035642           71 REQREKLMETVSSIFQGKLNLLVNNAAVAVP  101 (367)
Q Consensus        71 ~~sv~~~~~~~~~~~~g~iD~lI~~Ag~~~~  101 (367)
                      .++..+.+.   +.+ ...|++|++|++...
T Consensus        72 ~~~m~~~~~---~~~-~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVN---ASV-QQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHH---HHG-GGCSEEEECCBCCSE
T ss_pred             hHHHHHHHH---hhh-ccceeEeeeechhhh
Confidence            555544443   333 567999999998754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.58  E-value=0.007  Score=48.86  Aligned_cols=74  Identities=19%  Similarity=0.220  Sum_probs=49.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +|+|.|+ |++|...+..+...|+ .|+++++++++++.+.+    .+.... +  |-. .+.++...+..   .+..+|
T Consensus        35 ~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~~~-i--~~~-~~~~~~~~~~~---~~~g~d  102 (172)
T d1h2ba2          35 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADHV-V--DAR-RDPVKQVMELT---RGRGVN  102 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSEE-E--ETT-SCHHHHHHHHT---TTCCEE
T ss_pred             EEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----ccccee-e--cCc-ccHHHHHHHhh---CCCCce
Confidence            8999886 9999999998888886 67888898877655443    243332 2  333 23444444322   113599


Q ss_pred             EEEEcCC
Q 035642           91 LLVNNAA   97 (367)
Q Consensus        91 ~lI~~Ag   97 (367)
                      ++|.++|
T Consensus       103 ~vid~~g  109 (172)
T d1h2ba2         103 VAMDFVG  109 (172)
T ss_dssp             EEEESSC
T ss_pred             EEEEecC
Confidence            9999999

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.54  E-value=0.017  Score=45.06  Aligned_cols=110  Identities=12%  Similarity=0.058  Sum_probs=66.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK---GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~---~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++.|.|| |.+|.+++..++.+|.  ++++.++++++++....++...   .........|   .++           + 
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~-   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------L-   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------G-
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------h-
Confidence            4778897 8999999999998874  7999999998877666665432   2223333322   211           1 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecC
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISS  147 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS  147 (367)
                      ..-|++|.+||.....   ..+.   .+.+..|..    +.+.+.+.+.+ ...+.++++|-
T Consensus        66 ~~adivvitag~~~~~---g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          66 KGSDVVIVAAGVPQKP---GETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCCEEEEecccccCC---Ccch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCC
Confidence            4579999999975432   1232   234455543    34444444433 34566666653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.50  E-value=0.0089  Score=47.79  Aligned_cols=81  Identities=15%  Similarity=0.126  Sum_probs=57.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH---------h-cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK---------L-KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~---------~-~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.|.|+ |-+|.++|+.|.+.|++|++++|+++..+++.+.-.         . ...++.++.+   ..+++.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            4667766 999999999999999999999999887776544310         0 1234444433   367888888888


Q ss_pred             HHHcCCCccEEEEcCC
Q 035642           82 SSIFQGKLNLLVNNAA   97 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag   97 (367)
                      .... .+=.++++.++
T Consensus        78 ~~~l-~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHL-SPTAIVTDVAS   92 (165)
T ss_dssp             GGGS-CTTCEEEECCS
T ss_pred             hhhc-ccccceeeccc
Confidence            7765 44456666654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.029  Score=44.00  Aligned_cols=115  Identities=14%  Similarity=0.062  Sum_probs=69.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CC--CEEEEEeCChhHHHHHHHHHHhcCCcEEE-EEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FG--AIIHTCSRNQTELNERLQEWKLKGLKVTG-SVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G--~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~-~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ++.|+||+|.+|.++|-.|+. .+  ..+++.+..+ ..+....++......... ....-.+.+   + +        .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~---~-~--------~   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP---A-L--------E   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH---H-H--------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc---c-c--------C
Confidence            588999999999999998864 34  5899999864 455555566543222111 111222322   2 2        3


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      .-|++|.+||......   .+   -.+.+..|..-...+.+.+.++   ...+.|+++|..
T Consensus        69 ~aDvvvitaG~~~k~g---~~---R~dl~~~N~~i~~~v~~~i~~~---~p~aivivvtNP  120 (145)
T d2cmda1          69 GADVVLISAGVRRKPG---MD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (145)
T ss_dssp             TCSEEEECCSCCCCTT---CC---GGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSS
T ss_pred             CCCEEEECCCccCCCC---cc---hhhHHHHHHHHHHHHHHHHHhh---CCCcEEEEccCC
Confidence            5799999999753221   12   2345677766666666666554   345677777654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.49  E-value=0.029  Score=43.73  Aligned_cols=112  Identities=13%  Similarity=0.047  Sum_probs=68.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.|+|| |.+|.+++..|+..|.  ++++.++++++++....++...    .....+...  .+.++           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4778896 9999999999999984  8999999988776555454321    223333322  12211           1


Q ss_pred             CCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecC
Q 035642           86 QGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISS  147 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS  147 (367)
                       ...|++|.+||.....   ..+.   .+.+..|..-...+.+.+.++   ...+.++++|-
T Consensus        68 -~dadvvvitag~~~~~---g~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvtN  119 (142)
T d1guza1          68 -ANSDIVIITAGLPRKP---GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN  119 (142)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred             -cCCeEEEEEEecCCCC---CCch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEecC
Confidence             4579999999975322   1122   234555555445555555443   34566666654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.43  E-value=0.0072  Score=47.78  Aligned_cols=76  Identities=9%  Similarity=0.013  Sum_probs=60.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      .++|.|. |-+|+.+++.|.++|..|++++.++++.....+....  ..+.++.+|.++++.++++--       .+.|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~i-------~~a~~   74 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGI-------DRCRA   74 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTT-------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhcc-------ccCCE
Confidence            6888888 7999999999999999999999998876666665543  356778899999987766531       45788


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      +|-..+
T Consensus        75 vi~~~~   80 (153)
T d1id1a_          75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEccc
Confidence            877654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.39  E-value=0.027  Score=44.46  Aligned_cols=118  Identities=8%  Similarity=0.029  Sum_probs=70.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      ++-|.|+ |.+|.++|..|+..+. +++++++++++++....++...    +.+......|  +.+           .. 
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~-   69 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL-   69 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG-
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc-
Confidence            7888896 9999999988888885 7999999988777666665432    2233333222  111           11 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      ..-|++|.+||........+... .-...+..|..-...+.+.+.++   ...+.++++|-.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~-~R~~l~~~N~~iv~~i~~~i~~~---~p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEW-NRDDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTC-CGGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCCcccc-chhHHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            45899999999753321111011 11234556655444454444443   335666766643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.36  E-value=0.015  Score=46.26  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=34.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      .+++|.|+ |+||...+..+...|++|+++++++++.+.+
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            38999875 9999999999999999999999999887654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.33  E-value=0.0055  Score=49.51  Aligned_cols=76  Identities=13%  Similarity=0.174  Sum_probs=50.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHH-HHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQ-REKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~s-v~~~~~~~~~~~~g~i   89 (367)
                      +|+|.|+ ||+|...+..+...|+ +|+.+++++++++.+.+ +   |....+   |-++.+. .++..+...   ++.+
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~---GAd~~i---n~~~~~~~~~~~~~~~~---~~G~   99 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F---GATDFV---NPNDHSEPISQVLSKMT---NGGV   99 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCCEEE---CGGGCSSCHHHHHHHHH---TSCB
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c---CCcEEE---cCCCcchhHHHHHHhhc---cCCc
Confidence            9999986 7788888888888887 78899999988765433 3   544332   3332222 233333222   2579


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999993

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.31  E-value=0.0053  Score=50.94  Aligned_cols=78  Identities=12%  Similarity=0.201  Sum_probs=51.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      .+|+|.|+ |++|...+......|+ +|+++++++++++.+.+    .|....   .|-.+.+ +.+.+.++..  +..+
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~Ga~~~---~~~~~~~-~~~~i~~~t~--g~g~   95 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFEIA---DLSLDTP-LHEQIAALLG--EPEV   95 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCEEE---ETTSSSC-HHHHHHHHHS--SSCE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----ccccEE---EeCCCcC-HHHHHHHHhC--CCCc
Confidence            39999986 8999888888878887 79999999887754432    244332   2333333 3333333322  1469


Q ss_pred             cEEEEcCCCC
Q 035642           90 NLLVNNAAVA   99 (367)
Q Consensus        90 D~lI~~Ag~~   99 (367)
                      |++|.+.|..
T Consensus        96 D~vid~vG~~  105 (195)
T d1kola2          96 DCAVDAVGFE  105 (195)
T ss_dssp             EEEEECCCTT
T ss_pred             EEEEECcccc
Confidence            9999999853

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.21  E-value=0.024  Score=44.24  Aligned_cols=111  Identities=13%  Similarity=0.103  Sum_probs=65.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEc-cCCCHHHHHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK----GLKVTGSVC-DLSSREQREKLMETVSSI   84 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~-Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++.|.|+ |.+|.++|-.|+.++. ++++.+.++++.+....++...    +....+..+ |..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            36788896 9999999999998885 8999999988777666665432    222222211 2221              


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHc-CCCCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKA-SGNGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~-~~~g~IV~iSS  147 (367)
                      . ..-|++|-+||.....      ...-.+.+..|..    +.+...+.+.+ ...+.++++|-
T Consensus        67 ~-~~advvvitag~~~~~------~~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 T-ANSDVIVVTSGAPRKP------GMSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             G-TTCSEEEECCSCC---------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSS
T ss_pred             h-cCCCEEEEeeeccCCc------CcchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCC
Confidence            1 3579999999975322      1122344555653    44555555544 33566665543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.94  E-value=0.017  Score=46.67  Aligned_cols=84  Identities=10%  Similarity=0.213  Sum_probs=59.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH---------------hcCCcEEEEEccCCCHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK---------------LKGLKVTGSVCDLSSREQREK   76 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~---------------~~~~~~~~~~~Dlsd~~sv~~   76 (367)
                      +|-|.|- |-+|.++|+.|+++|++|++.+|++++.+++.+.-.               ..-.....+...+.+.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            5667776 899999999999999999999999998887654311               111112233345666778888


Q ss_pred             HHHHHHHHcCCCccEEEEcCC
Q 035642           77 LMETVSSIFQGKLNLLVNNAA   97 (367)
Q Consensus        77 ~~~~~~~~~~g~iD~lI~~Ag   97 (367)
                      +.+.+.... .+=+++|.+..
T Consensus        83 v~~~l~~~~-~~g~iiid~sT  102 (176)
T d2pgda2          83 FIEKLVPLL-DIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHC-CTTCEEEECSC
T ss_pred             HHHHHHhcc-ccCcEEEecCc
Confidence            888777665 44466776654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0092  Score=49.31  Aligned_cols=44  Identities=16%  Similarity=0.237  Sum_probs=38.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWK   55 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~   55 (367)
                      ++|.|.|| |-+|..+|..|+..|+.|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            47888898 889999999999999999999999987776655543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.82  E-value=0.047  Score=42.51  Aligned_cols=110  Identities=12%  Similarity=-0.032  Sum_probs=66.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCcEEEEEc-cCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWKLK----GLKVTGSVC-DLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~~~----~~~~~~~~~-Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.|.|+ |.+|.++|..++.+|.  .++++++++++++....++...    +........ |..+              
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------
Confidence            4778896 9999999999998885  6999999998877666566431    222222222 3211              


Q ss_pred             cCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcC-CCCEEEEecC
Q 035642           85 FQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKAS-GNGIIVFISS  147 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~-~~g~IV~iSS  147 (367)
                      . ..-|++|.+||.....   ..+.   .+.+..|..    +.+.+.+.+.+. ..+.++++|-
T Consensus        67 ~-~~adiVvitag~~~~~---g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 L-KGSEIIVVTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             G-TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             h-ccccEEEEeccccCCC---CCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecC
Confidence            1 4579999999964322   1232   234444544    344444444443 3455665554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.77  E-value=0.0089  Score=48.19  Aligned_cols=43  Identities=16%  Similarity=0.246  Sum_probs=38.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++|+|.|+ ||.|++++..|.+.|+ +|.++.|+.++++.+.+.+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            48999988 9999999999999997 7999999999988887766

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.71  E-value=0.011  Score=47.78  Aligned_cols=42  Identities=21%  Similarity=0.231  Sum_probs=36.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      +++-|.|| |.+|.++|..|+++|++|.+.+|++++.+...+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            57889998 9999999999999999999999998887665543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.29  E-value=0.011  Score=46.85  Aligned_cols=115  Identities=10%  Similarity=0.087  Sum_probs=60.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-------IIHTCSRNQ--TELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-------~Vi~~~R~~--~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      +|.|+||+|.+|.+++-.|+..+.       .+++.+.+.  ++++...-++... ......+..  ++.  ..+.+   
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~--~~~~~---   77 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDK--EEIAF---   77 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESC--HHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Ccc--ccccc---
Confidence            799999999999999999986542       356666544  3444444333322 122222221  111  11222   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           82 SSIFQGKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                           ...|++|-+||......-   +.+   +.+..|..=...+.+.+.++  ....+.++.+|
T Consensus        78 -----~~~dvVVitag~~~~~g~---sr~---dll~~N~~i~k~~~~~i~k~--a~~~~~iivvs  129 (154)
T d5mdha1          78 -----KDLDVAILVGSMPRRDGM---ERK---DLLKANVKIFKCQGAALDKY--AKKSVKVIVVG  129 (154)
T ss_dssp             -----TTCSEEEECCSCCCCTTC---CTT---TTHHHHHHHHHHHHHHHHHH--SCTTCEEEECS
T ss_pred             -----CCceEEEEecccCCCCCC---chh---HHHHHhHHHHHHHHHHHHhh--CCCceEEEEec
Confidence                 568999999997543211   221   23455554444444444332  12234555554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.10  E-value=0.015  Score=47.58  Aligned_cols=42  Identities=21%  Similarity=0.179  Sum_probs=36.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      +|.|.|| |-+|..+|..|+..|++|++.+++++.+++..+.+
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            6888898 88999999999999999999999998877665554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.05  E-value=0.14  Score=40.38  Aligned_cols=82  Identities=15%  Similarity=0.085  Sum_probs=57.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHH------------hcCCcEEEEEccCCCHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA--IIHTCSRNQTELNERLQEWK------------LKGLKVTGSVCDLSSREQREKL   77 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~--~Vi~~~R~~~~~~~~~~~l~------------~~~~~~~~~~~Dlsd~~sv~~~   77 (367)
                      +++|.|. |-||.++|+.|.+.|+  +|++++++++..+.+.+.-.            ....++.++.   ..++++.++
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFREI   78 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhhh
Confidence            5888875 9999999999999996  78999999888776654311            0012333332   346778888


Q ss_pred             HHHHHHHcCCCccEEEEcCCC
Q 035642           78 METVSSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        78 ~~~~~~~~~g~iD~lI~~Ag~   98 (367)
                      ++++.... ..=.+++..++.
T Consensus        79 l~~l~~~~-~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYIL-SEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHS-CTTCEEEECCSC
T ss_pred             hhhhhccc-cccccccccccc
Confidence            88887766 444566666664

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.97  E-value=0.021  Score=46.16  Aligned_cols=47  Identities=23%  Similarity=0.183  Sum_probs=40.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL   56 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~   56 (367)
                      +.++ +|+|.|+ ||.+++++..|.+.| +|.++.|+.++++++.+.+..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            3556 8999987 789999999998777 999999999999998888764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.88  E-value=0.028  Score=44.65  Aligned_cols=83  Identities=10%  Similarity=0.057  Sum_probs=53.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHH---HHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-------KGLKVTGSVCDLSSREQREKLM---ETVS   82 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-------~~~~~~~~~~Dlsd~~sv~~~~---~~~~   82 (367)
                      |-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.+.-..       .-.+..++..=+.+++++++++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            556655 8999999999999999999999999887776542110       0001223333466778888776   2333


Q ss_pred             HHcCCCccEEEEcCC
Q 035642           83 SIFQGKLNLLVNNAA   97 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag   97 (367)
                      ... .+=+++|.+..
T Consensus        82 ~~~-~~g~iiid~sT   95 (161)
T d1vpda2          82 EGA-KPGTVLIDMSS   95 (161)
T ss_dssp             HHC-CTTCEEEECSC
T ss_pred             hcc-CCCCEEEECCC
Confidence            333 33356666544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.82  E-value=0.1  Score=41.68  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=57.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +|+|.|| |-.|+..++.....|+.|.+++.+.++++++...+..   .+.+   -.++.+.+.+.+        ..-|+
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~---~~~~~~~l~~~~--------~~aDi   98 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV--------AEADL   98 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH--------HTCSE
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---ccee---ehhhhhhHHHhh--------ccCcE
Confidence            8999998 7889999999999999999999999999888776643   2322   235566665555        35799


Q ss_pred             EEEcCCCCCC
Q 035642           92 LVNNAAVAVP  101 (367)
Q Consensus        92 lI~~Ag~~~~  101 (367)
                      +|.++-+...
T Consensus        99 vI~aalipG~  108 (168)
T d1pjca1          99 LIGAVLVPGR  108 (168)
T ss_dssp             EEECCCCTTS
T ss_pred             EEEeeecCCc
Confidence            9999987544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.037  Score=48.55  Aligned_cols=24  Identities=17%  Similarity=0.041  Sum_probs=21.4

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCC
Q 035642           20 RGIGHAIVEELAGFGAIIHTCSRN   43 (367)
Q Consensus        20 ~GIG~aia~~L~~~G~~Vi~~~R~   43 (367)
                      |-.|.++|+.|+.+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            789999999999999999988543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.017  Score=41.48  Aligned_cols=36  Identities=19%  Similarity=0.113  Sum_probs=31.3

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      +++ +++|.|. |.-|+++|+.|.++|++|.+.+.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            455 8999998 77899999999999999999998654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.42  E-value=0.046  Score=40.59  Aligned_cols=38  Identities=16%  Similarity=0.175  Sum_probs=32.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      +++++ +++|.|+ |-+|..-++.|++.|++|++++....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            46777 9999998 56999999999999999999877654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.30  E-value=0.02  Score=45.21  Aligned_cols=34  Identities=15%  Similarity=0.187  Sum_probs=31.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE   46 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~   46 (367)
                      +|.|.|+ |.||..++..|++.|++|.+++|+.+.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5889998 999999999999999999999998754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.24  E-value=0.12  Score=38.26  Aligned_cols=35  Identities=20%  Similarity=0.324  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      .++++|.|| |.||.++|..|.+.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            358888887 89999999999999999999988753

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.16  E-value=0.13  Score=40.64  Aligned_cols=85  Identities=11%  Similarity=0.103  Sum_probs=52.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH---H
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL-------KGLKVTGSVCDLSSREQREKLMET---V   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~-------~~~~~~~~~~Dlsd~~sv~~~~~~---~   81 (367)
                      +|-|.| .|-+|.++|+.|+++|+.|.+.+|+.++.+.+.+.-..       .......+..-+.+.++++.++..   +
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            355554 58999999999999999999999998877665432110       001222333345666777776543   2


Q ss_pred             HHHcCCCccEEEEcCCC
Q 035642           82 SSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~   98 (367)
                      .... .+=+++|.+...
T Consensus        82 ~~~l-~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHI-APGTLVLECSTI   97 (162)
T ss_dssp             HHHS-CTTCEEEECSCC
T ss_pred             cccC-CCCCEEEECCCC
Confidence            3332 222466655543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.99  E-value=0.051  Score=44.61  Aligned_cols=77  Identities=18%  Similarity=0.140  Sum_probs=60.3

Q ss_pred             EEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Q 035642           15 ITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLLVN   94 (367)
Q Consensus        15 VTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~lI~   94 (367)
                      +|-|+||...++.+.+ . +.+|++++++++.++...+.+...+.++.++..+.++...+   .+...  . +++|.++.
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~-~~vdgIl~  101 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--I-EKVDGILM  101 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--C-SCEEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--C-CCcceeee
Confidence            6888899988888876 3 56999999999999888887777778899999888765443   32221  1 58999999


Q ss_pred             cCCCC
Q 035642           95 NAAVA   99 (367)
Q Consensus        95 ~Ag~~   99 (367)
                      ..|+.
T Consensus       102 DlGvS  106 (192)
T d1m6ya2         102 DLGVS  106 (192)
T ss_dssp             ECSCC
T ss_pred             ccchh
Confidence            99985

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.91  E-value=0.13  Score=38.68  Aligned_cols=35  Identities=17%  Similarity=0.208  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642            9 NEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus         9 ~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      +.++++|.|| |.||.++|..|.+.|++|.++.++.
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3458889887 8999999999999999999998865

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.83  E-value=0.2  Score=38.39  Aligned_cols=76  Identities=13%  Similarity=0.141  Sum_probs=53.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHH-CCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAG-FGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~-~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +|.|.|++|-.|+++++...+ .++.++. +++... ..    .+...+.++   ..|+|.++.+.+.++.+.+.   ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence            589999999999999998765 4667654 454332 11    122223333   35999999999999888764   47


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      -+|+-+.|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            788877775

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.82  E-value=0.12  Score=41.41  Aligned_cols=41  Identities=15%  Similarity=0.153  Sum_probs=35.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      +-|. |.|-+|.++|++|+++|++|.+.+|++++.+++.++.
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            4455 4589999999999999999999999999988887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.79  E-value=0.098  Score=39.84  Aligned_cols=73  Identities=22%  Similarity=0.255  Sum_probs=54.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHT-CSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~-~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++.|.|++|-.|+.+++.+.++|+.++. .+++....      +  ...+   +..|+|.++.+.+.++.+.+.   ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~---~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY---RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc---CCC
Confidence            5899999999999999999999998665 45443210      1  1223   235999999999999988775   467


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      +|+-+.|.
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            88888774

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.67  E-value=0.05  Score=45.52  Aligned_cols=37  Identities=22%  Similarity=0.249  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642            7 WSNEQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus         7 ~~~~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      |.-.++|+|.|| |-.|.++|..|+++|++|.++.|+.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            344458999998 7899999999999999999999863

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.44  E-value=0.062  Score=42.05  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=35.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFG-AIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G-~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      ++.+.|+ |-+|.++++.|++.| ++|++++|++++.+.+.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4667776 999999999999887 89999999998887776653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.18  Score=37.94  Aligned_cols=33  Identities=18%  Similarity=0.208  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++++|.|| |.||.++|..|.+.|.+|.++.|+.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            58889888 6899999999999999999999864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.38  E-value=0.18  Score=37.57  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .++++|.|| |.||.++|..|++.|.+|.++.++.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            358889887 8999999999999999999988764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.22  E-value=0.24  Score=41.38  Aligned_cols=71  Identities=15%  Similarity=0.055  Sum_probs=56.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||=.|++.|   ..+..|+++|++|++++-+++-++.+.+.+...+.++.++..|+.+..            +++..|+
T Consensus        44 ~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~fD~  108 (251)
T d1wzna1          44 RVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNEFDA  108 (251)
T ss_dssp             EEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSCEEE
T ss_pred             EEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccccch
Confidence            7999998776   446678899999999999998888888877777778899998876532            1256898


Q ss_pred             EEEcCC
Q 035642           92 LVNNAA   97 (367)
Q Consensus        92 lI~~Ag   97 (367)
                      ++..-+
T Consensus       109 I~~~~~  114 (251)
T d1wzna1         109 VTMFFS  114 (251)
T ss_dssp             EEECSS
T ss_pred             Hhhhhh
Confidence            887644

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.22  E-value=0.096  Score=43.22  Aligned_cols=42  Identities=14%  Similarity=0.245  Sum_probs=36.2

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      ++++ +|+|-| .|.+|.++|+.|.+.|++|++++.+.+.....
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            5777 999987 68899999999999999999999988766543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.06  E-value=0.21  Score=37.08  Aligned_cols=33  Identities=15%  Similarity=0.171  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++++|.|| |.||.++|..|++.|.+|.++.|..
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            48888887 8999999999999999999999864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.06  E-value=0.15  Score=40.59  Aligned_cols=74  Identities=12%  Similarity=0.099  Sum_probs=52.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK-------------GLKVTGSVCDLSSREQREKLM   78 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~-------------~~~~~~~~~Dlsd~~sv~~~~   78 (367)
                      +||..|++.|   ..+..|+++|++|++++.++...+.+.+..+..             +....++.+|..+......  
T Consensus        23 rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--   97 (201)
T d1pjza_          23 RVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI--   97 (201)
T ss_dssp             EEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH--
T ss_pred             EEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccc--
Confidence            9999998777   366688999999999999999888877766432             2334667777766443221  


Q ss_pred             HHHHHHcCCCccEEEEcCCC
Q 035642           79 ETVSSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        79 ~~~~~~~~g~iD~lI~~Ag~   98 (367)
                              ...|.++.....
T Consensus        98 --------~~~D~i~~~~~l  109 (201)
T d1pjza_          98 --------GHCAAFYDRAAM  109 (201)
T ss_dssp             --------HSEEEEEEESCG
T ss_pred             --------cceeEEEEEeee
Confidence                    357877665443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.95  E-value=0.19  Score=37.26  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .++++|.|| |.+|.++|..|.+.|.+|.++.|..
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            357888877 8999999999999999999998865

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.79  E-value=0.24  Score=39.98  Aligned_cols=41  Identities=10%  Similarity=0.105  Sum_probs=35.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      +|+|.|| |-.|.+.++-....|+.|.+.|.+.++++++.+.
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            7899988 7889999999999999999999999888776554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.79  E-value=0.31  Score=36.35  Aligned_cols=35  Identities=17%  Similarity=0.285  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      .++++|.|| |.+|.++|..|.+.|.+|.++.++..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            347888777 89999999999999999999988753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.61  E-value=0.12  Score=43.50  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=57.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      ++||=.|++.|.   ++..|+++|.+|++++.+++.++.+.+.....+.++.++..|+.+.+            ..+++|
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~~~fD  103 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------INRKFD  103 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CSCCEE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cccccc
Confidence            389999988874   67788999999999999999888877777766778889888886532            116799


Q ss_pred             EEEEcCCC
Q 035642           91 LLVNNAAV   98 (367)
Q Consensus        91 ~lI~~Ag~   98 (367)
                      ++++..+.
T Consensus       104 ~i~~~~~~  111 (246)
T d1y8ca_         104 LITCCLDS  111 (246)
T ss_dssp             EEEECTTG
T ss_pred             ccceeeee
Confidence            99876543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.59  E-value=0.33  Score=35.77  Aligned_cols=67  Identities=13%  Similarity=0.219  Sum_probs=50.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      ++.|.|| |-+|+-++....+.|++|++.+.+++.-..        ...-.++..|..|.+.+.++..+.      .+|+
T Consensus        13 kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~------~~Dv   77 (111)
T d1kjqa2          13 RVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELE------KPHY   77 (111)
T ss_dssp             EEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhh------CCce
Confidence            7999995 789999999999999999999988653111        111245667999999999888653      4677


Q ss_pred             EE
Q 035642           92 LV   93 (367)
Q Consensus        92 lI   93 (367)
                      +-
T Consensus        78 iT   79 (111)
T d1kjqa2          78 IV   79 (111)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.34  E-value=0.27  Score=36.77  Aligned_cols=32  Identities=19%  Similarity=0.252  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRN   43 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~   43 (367)
                      +.++|.|| |.||.++|..|.+.|++|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            47888887 899999999999999999998876

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.05  Score=42.49  Aligned_cols=36  Identities=17%  Similarity=0.272  Sum_probs=31.5

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN   43 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~   43 (367)
                      +++++ ++||.|| |.+|..-++.|++.|++|.+++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56777 9999999 679999999999999999988653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.086  Score=48.75  Aligned_cols=31  Identities=26%  Similarity=0.466  Sum_probs=27.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        39 kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          39 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            7999999 7899999999999998 78888764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.07  E-value=0.094  Score=42.77  Aligned_cols=41  Identities=15%  Similarity=0.127  Sum_probs=35.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQE   53 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~   53 (367)
                      ++.|.|| |..|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            6888887 6799999999999999999999998877665543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.00  E-value=0.3  Score=37.86  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=29.2

Q ss_pred             CCCeEEE-EcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642            9 NEQNYFI-TGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus         9 ~~~~vLV-TGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ..+.++| -.+++.||.++|..|++.|++|.++.+..
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            3444444 45679999999999999999999998875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.84  E-value=0.098  Score=39.55  Aligned_cols=68  Identities=15%  Similarity=0.049  Sum_probs=48.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNLL   92 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~l   92 (367)
                      ++|.|. |.+|+.+++.|  +|..|++++.+++..+...    ..  .+.++.+|.++++.++++-      . .+.+.+
T Consensus         3 ivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~------i-~~A~~v   66 (129)
T d2fy8a1           3 VVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKAN------V-RGARAV   66 (129)
T ss_dssp             EEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTT------C-TTCSEE
T ss_pred             EEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhh------h-hcCcEE
Confidence            677775 78999999999  4666788888887765442    22  3567789999998877642      1 456777


Q ss_pred             EEcC
Q 035642           93 VNNA   96 (367)
Q Consensus        93 I~~A   96 (367)
                      |-+.
T Consensus        67 i~~~   70 (129)
T d2fy8a1          67 IVNL   70 (129)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7644

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.82  E-value=0.77  Score=40.21  Aligned_cols=111  Identities=15%  Similarity=0.108  Sum_probs=66.6

Q ss_pred             eEEEEc-CCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITG-GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTG-as~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||=.+ ++||++.++    +..|.+|+.++.++..++.+.+.+...+. ++.++..|..+      +.+...... .+.
T Consensus       148 rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~-~~f  216 (318)
T d1wxxa2         148 RALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG-ERF  216 (318)
T ss_dssp             EEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT-CCE
T ss_pred             eeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh-cCC
Confidence            777555 556655443    34467999999999999888888876663 58888877543      222332222 579


Q ss_pred             cEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEe
Q 035642           90 NLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFI  145 (367)
Q Consensus        90 D~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~i  145 (367)
                      |.||.+.-.+.....   ...       ........+++.+.+.++.  +|.+++.
T Consensus       217 D~Vi~DpP~~~~~~~---~~~-------~~~~~~~~l~~~a~~lLkp--GG~Lv~~  260 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKK---DVE-------RAYRAYKEVNLRAIKLLKE--GGILATA  260 (318)
T ss_dssp             EEEEECCCCSCCSTT---SHH-------HHHHHHHHHHHHHHHTEEE--EEEEEEE
T ss_pred             CEEEEcCCccccchH---HHH-------HHHHHHHHHHHHHHHHcCC--CCEEEEE
Confidence            999999765433211   111       1122333456666666543  4555543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=0.35  Score=40.63  Aligned_cols=75  Identities=16%  Similarity=0.221  Sum_probs=48.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcCCcEEEEEcc--CC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN-------------------QTELNERLQEWKLKGLKVTGSVCD--LS   69 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~-------------------~~~~~~~~~~l~~~~~~~~~~~~D--ls   69 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|.+.+.+.+...+..+.+...+  ++
T Consensus        32 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~  110 (247)
T d1jw9b_          32 RVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD  110 (247)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhh
Confidence            8999995 8999999999999998 78888764                   235666666666544444333333  33


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcC
Q 035642           70 SREQREKLMETVSSIFQGKLNLLVNNA   96 (367)
Q Consensus        70 d~~sv~~~~~~~~~~~~g~iD~lI~~A   96 (367)
                      + +......        ...|++|.+.
T Consensus       111 ~-~~~~~~~--------~~~divid~~  128 (247)
T d1jw9b_         111 D-AELAALI--------AEHDLVLDCT  128 (247)
T ss_dssp             H-HHHHHHH--------HTSSEEEECC
T ss_pred             h-ccccccc--------cccceeeecc
Confidence            2 3332322        3467777654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.62  E-value=0.4  Score=35.71  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=28.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      +++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus        32 ~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          32 NVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            7777766 8999999999999999999998764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.60  E-value=0.23  Score=37.05  Aligned_cols=33  Identities=27%  Similarity=0.328  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      +.++|.|| |.+|.++|..|++.|++|.++.|++
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            36778776 8999999999999999999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.51  E-value=0.3  Score=36.44  Aligned_cols=34  Identities=12%  Similarity=0.171  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .++++|.|| |.||.++|..|.+.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            348888887 8999999999999999999998875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.49  E-value=0.37  Score=35.35  Aligned_cols=33  Identities=21%  Similarity=0.332  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++++|.|| |.+|.++|..|.+.|++|.++.|.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            47788776 8999999999999999999998864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.43  E-value=0.16  Score=39.64  Aligned_cols=41  Identities=15%  Similarity=0.094  Sum_probs=35.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEW   54 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l   54 (367)
                      +.+.| +|-+|.++++.|.+.|++|++++|+.++.+++.+++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            55554 589999999999999999999999999888777665

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.43  E-value=0.33  Score=39.65  Aligned_cols=73  Identities=12%  Similarity=0.092  Sum_probs=54.6

Q ss_pred             CCCC-eEEEEcCCCh-hHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            8 SNEQ-NYFITGGTRG-IGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         8 ~~~~-~vLVTGas~G-IG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      +++| +||=-|++.| +|.    .++..|+ +|++++.++..++.+.+.+...+.+..++..|+.+.             
T Consensus        44 dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            3556 8887786655 443    3456786 899999999988888887777778888888886432             


Q ss_pred             cCCCccEEEEcCCC
Q 035642           85 FQGKLNLLVNNAAV   98 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~   98 (367)
                       .+++|++|.|.-.
T Consensus       107 -~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -NSRVDIVIMNPPF  119 (201)
T ss_dssp             -CCCCSEEEECCCC
T ss_pred             -CCcCcEEEEcCcc
Confidence             2689999998854

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.92  E-value=0.48  Score=38.42  Aligned_cols=75  Identities=9%  Similarity=0.002  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +++||=.|++.|.   ++..|++.|++|++++.+++.++.+.+.....+.....+..|..+..     +     . .+..
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-----~-----~-~~~f  103 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----F-----E-DKTF  103 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----S-----C-TTCE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc-----c-----c-CcCc
Confidence            3489999998875   66788899999999999998888887777666667777877877632     0     0 1568


Q ss_pred             cEEEEcCCC
Q 035642           90 NLLVNNAAV   98 (367)
Q Consensus        90 D~lI~~Ag~   98 (367)
                      |+++...+.
T Consensus       104 D~I~~~~~l  112 (226)
T d1ve3a1         104 DYVIFIDSI  112 (226)
T ss_dssp             EEEEEESCG
T ss_pred             eEEEEecch
Confidence            999887654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.82  E-value=2.1  Score=37.35  Aligned_cols=112  Identities=20%  Similarity=0.187  Sum_probs=67.7

Q ss_pred             eEEEEcC-CChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFITGG-TRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGL--KVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLVTGa-s~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~--~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +||=.|+ +|+++.++    +..|+ +|+.++.+++.++.+.+.+...+.  ++.++..|+.      +......... .
T Consensus       148 ~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~-~  216 (324)
T d2as0a2         148 RVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKG-E  216 (324)
T ss_dssp             EEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTT-C
T ss_pred             eeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhcc-C
Confidence            7776664 45555544    45676 799999999998888887776553  6777776643      2233333332 5


Q ss_pred             CccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEec
Q 035642           88 KLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFIS  146 (367)
Q Consensus        88 ~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iS  146 (367)
                      ++|++|.++-......      ..    ..........+++.+.+.++.  +|.+++.|
T Consensus       217 ~fD~Vi~DpP~~~~~~------~~----~~~~~~~y~~l~~~a~~ll~p--GG~lv~~s  263 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHE------KD----LKAGLRAYFNVNFAGLNLVKD--GGILVTCS  263 (324)
T ss_dssp             CEEEEEECCCCSCSSG------GG----HHHHHHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred             CCCchhcCCccccCCH------HH----HHHHHHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence            7999999876543321      11    112233445566666666543  46666544

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.79  E-value=2.4  Score=33.16  Aligned_cols=75  Identities=12%  Similarity=0.163  Sum_probs=44.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-----CCEEEEEeCChhHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGF-----GAIIHTCSRNQTELNERLQEWKL----KGLKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~-----G~~Vi~~~R~~~~~~~~~~~l~~----~~~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      ++.|.||++.-...++..++..     +.+|++.+.++++++.....+..    .+........  +|   ..+.+    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc----
Confidence            7888888664333344444432     24899999999988755544432    1333332221  11   22333    


Q ss_pred             HHcCCCccEEEEcCCCC
Q 035642           83 SIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~   99 (367)
                          ..-|+||++||..
T Consensus        76 ----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVG   88 (167)
T ss_dssp             ----SSCSEEEECCCTT
T ss_pred             ----CCCCEEEECCCcC
Confidence                4689999999975

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.52  E-value=0.26  Score=35.30  Aligned_cols=75  Identities=20%  Similarity=0.182  Sum_probs=46.8

Q ss_pred             CCCCCCeEEEEcCCChhH-HHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642            6 WWSNEQNYFITGGTRGIG-HAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus         6 ~~~~~~~vLVTGas~GIG-~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      .|+..+++.+.|- +|+| .++|+.|.++|+.|.+.|+......   +.+.+.|..+  ...+-  ++.           
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v--~~g~~--~~~-----------   64 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKI--YIGHA--EEH-----------   64 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEE--EESCC--GGG-----------
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeE--EECCc--ccc-----------
Confidence            3444557888776 4555 5669999999999999998754332   2333335433  22221  111           


Q ss_pred             cCCCccEEEEcCCCCC
Q 035642           85 FQGKLNLLVNNAAVAV  100 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~~  100 (367)
                      . ...|.+|...++..
T Consensus        65 i-~~~d~vV~S~AI~~   79 (96)
T d1p3da1          65 I-EGASVVVVSSAIKD   79 (96)
T ss_dssp             G-TTCSEEEECTTSCT
T ss_pred             C-CCCCEEEECCCcCC
Confidence            1 35799999988753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.25  E-value=4.9  Score=34.72  Aligned_cols=113  Identities=12%  Similarity=0.067  Sum_probs=66.0

Q ss_pred             eEEEE-cCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           12 NYFIT-GGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        12 ~vLVT-Gas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      +||=. .++||++.+    ++..|+ .|+.++.++..++.+.+.+..++   .++.++..|+      .+.++...+.. 
T Consensus       147 ~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~~~~-  215 (317)
T d2b78a2         147 TVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYARRHH-  215 (317)
T ss_dssp             EEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHHHTT-
T ss_pred             ceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHHhhc-
Confidence            67744 455666544    345787 69999999998888887776543   3688888774      23344444433 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCc
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSV  148 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~  148 (367)
                      .+.|++|...-.+....-.  .        .........+++.+++.++.  +|.++ +||.
T Consensus       216 ~~fD~Ii~DPP~f~~~~~~--~--------~~~~~~~~~L~~~a~~ll~p--gG~l~-~~sc  264 (317)
T d2b78a2         216 LTYDIIIIDPPSFARNKKE--V--------FSVSKDYHKLIRQGLEILSE--NGLII-ASTN  264 (317)
T ss_dssp             CCEEEEEECCCCC-----C--C--------CCHHHHHHHHHHHHHHTEEE--EEEEE-EEEC
T ss_pred             CCCCEEEEcChhhccchhH--H--------HHHHHHHHHHHHHHHHHcCC--CCEEE-EEeC
Confidence            5799999986543221110  0        01122334466777776644  35444 4553

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.95  E-value=0.44  Score=35.69  Aligned_cols=34  Identities=18%  Similarity=0.257  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .+.++|.|| |.||.++|..|.+.|.+|.++.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            348888887 8999999999999999999998754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.92  E-value=0.1  Score=42.11  Aligned_cols=33  Identities=18%  Similarity=0.190  Sum_probs=29.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      +|.|.|| |..|.++|..|+++|++|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4778887 89999999999999999999999654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.81  E-value=0.67  Score=38.23  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=57.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||..|+++|--.++..+++  |.+|+.+.++++-.+...+.+...+ .++.++..|..+-.          ... ++.|
T Consensus        81 ~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~-~pfD  147 (215)
T d1jg1a_          81 NILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPK-APYD  147 (215)
T ss_dssp             CEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG-CCEE
T ss_pred             eEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------ccc-Ccce
Confidence            99999999888888888777  5679999999877777777776654 57888888875311          111 6899


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      .++.++++.
T Consensus       148 ~Iiv~~a~~  156 (215)
T d1jg1a_         148 VIIVTAGAP  156 (215)
T ss_dssp             EEEECSBBS
T ss_pred             eEEeecccc
Confidence            999988864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.79  E-value=0.24  Score=40.39  Aligned_cols=38  Identities=16%  Similarity=0.103  Sum_probs=32.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      ++.|. |.|.+|..+|..|+++|++|++.+.++++.+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            35666 569999999999999999999999998766544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.57  E-value=0.45  Score=38.33  Aligned_cols=38  Identities=24%  Similarity=0.334  Sum_probs=31.7

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      .++.+ ++.|.|. |.||+++++.|..-|.+|+..++...
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            34566 7888775 89999999999999999999998653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.36  E-value=0.73  Score=34.70  Aligned_cols=34  Identities=12%  Similarity=0.180  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .++++|.|| |.+|.++|..|.+.|.+|.++.+..
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            448888876 8999999999999999999998864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.34  E-value=0.93  Score=38.32  Aligned_cols=72  Identities=18%  Similarity=0.175  Sum_probs=53.2

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      ..+ +||=.|+++|+-   +..+++.|++|++++.++...+.+.+..+..+.+..++..|+.      ..+    . . +
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~------~~~----~-~-~  183 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE------AAL----P-F-G  183 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH------HHG----G-G-C
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccc------ccc----c-c-c
Confidence            344 899899888862   3456778999999999999998888877777777777776642      111    1 1 6


Q ss_pred             CccEEEEc
Q 035642           88 KLNLLVNN   95 (367)
Q Consensus        88 ~iD~lI~~   95 (367)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            89999876

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.26  E-value=2.4  Score=32.04  Aligned_cols=84  Identities=7%  Similarity=-0.008  Sum_probs=53.9

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Q 035642           10 EQNYFITGGT---RGIGHAIVEELAGFGAIIHTCSRNQTELN--ERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVS   82 (367)
Q Consensus        10 ~~~vLVTGas---~GIG~aia~~L~~~G~~Vi~~~R~~~~~~--~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~   82 (367)
                      .+++.|.|||   +..|..+++.|.+.|++|+.+..+.+...  .....+..-.  .++..+   ...++.+.++++++.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQAI   95 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHHH
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHHH
Confidence            3589999999   67999999999999999998866532211  0111111111  122221   245778888888887


Q ss_pred             HHcCCCccEEEEcCCCC
Q 035642           83 SIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        83 ~~~~g~iD~lI~~Ag~~   99 (367)
                      +.   ++..++...|..
T Consensus        96 ~~---g~k~v~~~~G~~  109 (139)
T d2d59a1          96 KK---GAKVVWFQYNTY  109 (139)
T ss_dssp             HH---TCSEEEECTTCC
T ss_pred             Hh---CCCEEEEecccc
Confidence            65   366777777754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.66  E-value=1.1  Score=36.70  Aligned_cols=77  Identities=13%  Similarity=0.109  Sum_probs=55.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG-LKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~-~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||-.|+++|--.++..++...+.+|+.++.+++..+.+.+.+...+ .++.++..|..+.-     .     .. ++.|
T Consensus        78 ~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-----~-----~~-~~fD  146 (213)
T d1dl5a1          78 RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-----P-----EF-SPYD  146 (213)
T ss_dssp             EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-----G-----GG-CCEE
T ss_pred             eEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-----c-----cc-cchh
Confidence            99999988877666666666666799999999998888888776653 35667766754311     0     11 6799


Q ss_pred             EEEEcCCCC
Q 035642           91 LLVNNAAVA   99 (367)
Q Consensus        91 ~lI~~Ag~~   99 (367)
                      .++.+++..
T Consensus       147 ~I~~~~~~~  155 (213)
T d1dl5a1         147 VIFVTVGVD  155 (213)
T ss_dssp             EEEECSBBS
T ss_pred             hhhhhccHH
Confidence            999888753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=88.48  E-value=0.59  Score=39.04  Aligned_cols=72  Identities=17%  Similarity=0.165  Sum_probs=51.4

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      -++++ +++|-|- |-+|.++|+.|.+.|++|+.++.+....+....+.   +..  .     .+.+   ++       +
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~---g~~--~-----~~~~---~~-------~   93 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE---GAD--A-----VAPN---AI-------Y   93 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CCE--E-----CCGG---GT-------T
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc---CCc--c-----cCCc---cc-------c
Confidence            35677 8888765 89999999999999999999999988877666554   221  1     1111   11       1


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                      .-++|+++-||-..
T Consensus        94 ~~~cDIl~PcA~~~  107 (230)
T d1leha1          94 GVTCDIFAPCALGA  107 (230)
T ss_dssp             TCCCSEEEECSCSC
T ss_pred             cccccEeccccccc
Confidence            15789999998743

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=88.40  E-value=0.44  Score=37.72  Aligned_cols=41  Identities=20%  Similarity=0.199  Sum_probs=34.9

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTEL   47 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~   47 (367)
                      .++.| +++|.|-|.-+|+-++..|.++|++|..+.+....+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            35666 999999999999999999999999999887665443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=87.73  E-value=1.2  Score=32.57  Aligned_cols=33  Identities=12%  Similarity=0.068  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++++|.|| |.||..+|..|++.|..|.++.|.+
T Consensus        23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            37777776 8999999999999999999998864

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.70  E-value=0.43  Score=38.94  Aligned_cols=70  Identities=17%  Similarity=0.148  Sum_probs=49.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++.| +||=.|+++|+   ++..++..|+ +|++++.+++..+.+.+.    -.++.++.+|+.+.              
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~l--------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSEI--------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGGC--------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhhc--------------
Confidence            4556 89999987773   2344667786 699999998776655443    34577888887532              


Q ss_pred             CCCccEEEEcCCC
Q 035642           86 QGKLNLLVNNAAV   98 (367)
Q Consensus        86 ~g~iD~lI~~Ag~   98 (367)
                      ++++|++|.|.-.
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            2789999998653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.69  E-value=0.24  Score=39.45  Aligned_cols=34  Identities=15%  Similarity=0.151  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCE-EEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAI-IHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~-Vi~~~R~~   44 (367)
                      .++|+|.|| |-.|..+|..|+++|++ |.++.|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            347899988 89999999999999994 98888875

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.62  E-value=0.29  Score=41.29  Aligned_cols=32  Identities=25%  Similarity=0.169  Sum_probs=28.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      -|+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3788887 8999999999999999999999875

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.25  E-value=0.43  Score=37.97  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=36.1

Q ss_pred             CCCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHH
Q 035642            7 WSNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELN   48 (367)
Q Consensus         7 ~~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~   48 (367)
                      .++.| +++|.|.|.=+|+-++..|+++|++|..+.+....+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            45677 9999999999999999999999999999887665443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.21  E-value=1.1  Score=34.43  Aligned_cols=82  Identities=11%  Similarity=0.063  Sum_probs=53.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLK------GLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~------~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      |-+.|- |-+|.++|++|++.|+.| ...|+.++..+..++....      -.+...+...+.+.+.+....+.+.+.. 
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~-   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL-   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence            555665 899999999999999866 5778887777766654321      0122233345666777887777776654 


Q ss_pred             CCccEEEEcCC
Q 035642           87 GKLNLLVNNAA   97 (367)
Q Consensus        87 g~iD~lI~~Ag   97 (367)
                      .+-.++|.+.-
T Consensus        80 ~~~~~iid~sT   90 (156)
T d2cvza2          80 REGTYWVDATS   90 (156)
T ss_dssp             CTTEEEEECSC
T ss_pred             ccccccccccc
Confidence            34455555543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.20  E-value=0.79  Score=36.03  Aligned_cols=38  Identities=18%  Similarity=0.273  Sum_probs=32.4

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE   46 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~   46 (367)
                      .+.| +++|.|= |-||+.+|+.|...|++|++++.++-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3556 7777775 689999999999999999999999854

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=86.77  E-value=0.55  Score=37.59  Aligned_cols=34  Identities=18%  Similarity=0.216  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      +++|+|.|| |-.|.+.|..|+++|++|.++.++.
T Consensus        43 ~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          43 KKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            348999988 7889999999999999999999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=86.73  E-value=0.34  Score=40.55  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      |+|+|.|| |--|..+|.+|+++|++|.++.++.
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            57888887 6778999999999999999998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.64  E-value=2.3  Score=33.58  Aligned_cols=72  Identities=18%  Similarity=0.153  Sum_probs=51.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      +||=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.++..+  .++.++.+|..      +..    ... ...
T Consensus        36 ~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~------~~~----~~~-~~~  101 (186)
T d1l3ia_          36 VAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP------EAL----CKI-PDI  101 (186)
T ss_dssp             EEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH------HHH----TTS-CCE
T ss_pred             EEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh------hcc----ccc-CCc
Confidence            8887887766   3344566778899999999999988888887765  47888888731      111    112 578


Q ss_pred             cEEEEcCC
Q 035642           90 NLLVNNAA   97 (367)
Q Consensus        90 D~lI~~Ag   97 (367)
                      |.++.+.+
T Consensus       102 D~v~~~~~  109 (186)
T d1l3ia_         102 DIAVVGGS  109 (186)
T ss_dssp             EEEEESCC
T ss_pred             CEEEEeCc
Confidence            99987654

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=86.40  E-value=1.7  Score=36.93  Aligned_cols=76  Identities=12%  Similarity=0.142  Sum_probs=52.0

Q ss_pred             eEEEEcCCCh-hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Q 035642           12 NYFITGGTRG-IGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG--LKVTGSVCDLSSREQREKLMETVSSIFQGK   88 (367)
Q Consensus        12 ~vLVTGas~G-IG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~--~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~   88 (367)
                      +++-.|+++| |+.+++ +  ...++|++++.+++.++-+.+..+..+  .++.+...|+.+.         ....+ ++
T Consensus       113 ~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-~~  179 (271)
T d1nv8a_         113 TVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-AS  179 (271)
T ss_dssp             EEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-TT
T ss_pred             EEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-Cc
Confidence            5665555555 555544 3  357899999999998888877776654  3677777787643         11223 68


Q ss_pred             ccEEEEcCCCCC
Q 035642           89 LNLLVNNAAVAV  100 (367)
Q Consensus        89 iD~lI~~Ag~~~  100 (367)
                      +|++|.|.-...
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999987653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.06  E-value=0.5  Score=39.05  Aligned_cols=75  Identities=13%  Similarity=0.178  Sum_probs=53.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh------------------cCCcEEEEEccCCCHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKL------------------KGLKVTGSVCDLSSREQ   73 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~------------------~~~~~~~~~~Dlsd~~s   73 (367)
                      +||..|++.|   ..+..|+++|++|++++-+++..+.+.+....                  .+.++.++.+|+.+...
T Consensus        48 rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~  124 (229)
T d2bzga1          48 RVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPR  124 (229)
T ss_dssp             EEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGGGGG
T ss_pred             EEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhhccc
Confidence            9999998776   45888899999999999999888776665431                  13467788888754321


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCC
Q 035642           74 REKLMETVSSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        74 v~~~~~~~~~~~~g~iD~lI~~Ag~~   99 (367)
                      .          ..+..|+++-.....
T Consensus       125 ~----------~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         125 T----------NIGKFDMIWDRGALV  140 (229)
T ss_dssp             S----------CCCCEEEEEESSSTT
T ss_pred             c----------ccCceeEEEEEEEEE
Confidence            0          015678777666554

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.90  E-value=1.9  Score=35.47  Aligned_cols=77  Identities=13%  Similarity=0.057  Sum_probs=58.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG------LKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~------~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      +||-.|+++|--.++..++.....+|+.++++++-.+.+.+.++..+      .++.+...|..+..          ...
T Consensus        79 ~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------~~~  148 (224)
T d1i1na_          79 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------AEE  148 (224)
T ss_dssp             EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------GGG
T ss_pred             eEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------chh
Confidence            99999999998888888888888899999999988887777765432      35677777754211          011


Q ss_pred             CCCccEEEEcCCCC
Q 035642           86 QGKLNLLVNNAAVA   99 (367)
Q Consensus        86 ~g~iD~lI~~Ag~~   99 (367)
                       ++.|.++.+++..
T Consensus       149 -~~fD~I~~~~~~~  161 (224)
T d1i1na_         149 -APYDAIHVGAAAP  161 (224)
T ss_dssp             -CCEEEEEECSBBS
T ss_pred             -hhhhhhhhhcchh
Confidence             6799999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.84  E-value=0.6  Score=35.94  Aligned_cols=37  Identities=11%  Similarity=0.103  Sum_probs=30.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      +-|.| .|-+|.++|+.|+++|+.|+..+++.++....
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            55665 49999999999999999999988877655443

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.60  E-value=8.6  Score=33.02  Aligned_cols=77  Identities=12%  Similarity=0.062  Sum_probs=51.5

Q ss_pred             eEEE-EcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 035642           12 NYFI-TGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKG---LKVTGSVCDLSSREQREKLMETVSSIFQG   87 (367)
Q Consensus        12 ~vLV-TGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~---~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g   87 (367)
                      +||= -.++|+++.++    +..|++|+.++.+...++.+.+.+..++   .++.++..|+      -+++++..... .
T Consensus       135 rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~~-~  203 (309)
T d2igta1         135 KVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERRG-S  203 (309)
T ss_dssp             EEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHHT-C
T ss_pred             eEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhcC-C
Confidence            6664 44556655544    4679999999999988888777665432   3578887774      33444444433 6


Q ss_pred             CccEEEEcCCCC
Q 035642           88 KLNLLVNNAAVA   99 (367)
Q Consensus        88 ~iD~lI~~Ag~~   99 (367)
                      +.|+||.+.-.+
T Consensus       204 ~fD~IilDPP~f  215 (309)
T d2igta1         204 TYDIILTDPPKF  215 (309)
T ss_dssp             CBSEEEECCCSE
T ss_pred             CCCEEEECCCcc
Confidence            799999886543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.32  E-value=0.54  Score=38.99  Aligned_cols=34  Identities=18%  Similarity=0.203  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      .+|+|.|| |--|..+|..|+++|++|+++.|+.+
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            38999998 78899999999999999999998653

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.09  E-value=2.2  Score=33.85  Aligned_cols=74  Identities=16%  Similarity=0.245  Sum_probs=54.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++||=.|++.|  . .+..|+++|++|++++.+++.++.+.+.....+. .+.+...|+.+..            +.+..
T Consensus        32 grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~~~f   96 (198)
T d2i6ga1          32 GRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FDGEY   96 (198)
T ss_dssp             CEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CCCCE
T ss_pred             CcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------ccccc
Confidence            48999998655  3 5678889999999999999888877766665543 4777777876543            11568


Q ss_pred             cEEEEcCCCC
Q 035642           90 NLLVNNAAVA   99 (367)
Q Consensus        90 D~lI~~Ag~~   99 (367)
                      |+++.+....
T Consensus        97 D~I~~~~~~~  106 (198)
T d2i6ga1          97 DFILSTVVMM  106 (198)
T ss_dssp             EEEEEESCGG
T ss_pred             cEEEEeeeee
Confidence            9998776543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.92  E-value=7.1  Score=30.27  Aligned_cols=74  Identities=16%  Similarity=0.192  Sum_probs=45.5

Q ss_pred             eEEEEcCCChhHHH--HHHHHHHC----CCEEEEEeCChhHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHA--IVEELAGF----GAIIHTCSRNQTELNERLQEWKL----KGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~a--ia~~L~~~----G~~Vi~~~R~~~~~~~~~~~l~~----~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.|.|| |.+|..  +...++..    +.++++.++++++++.....+..    .+....+...  +|   .++.+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc---
Confidence            6888897 656643  44445532    45999999999888765554433    2333333322  22   22333   


Q ss_pred             HHHcCCCccEEEEcCCCC
Q 035642           82 SSIFQGKLNLLVNNAAVA   99 (367)
Q Consensus        82 ~~~~~g~iD~lI~~Ag~~   99 (367)
                           ...|++|+++++.
T Consensus        75 -----~dad~Vv~~~~~g   87 (171)
T d1obba1          75 -----IDADFVINTAMVG   87 (171)
T ss_dssp             -----TTCSEEEECCCTT
T ss_pred             -----cCCCeEeeecccc
Confidence                 4689999999875

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.85  E-value=1.6  Score=31.74  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=26.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHH---HCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELA---GFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~---~~G~~Vi~~~R~~   44 (367)
                      ++++|.|| |.+|.++|..|.   .+|.+|.++.|..
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            58889888 899999997665   4556899888754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.55  E-value=0.43  Score=38.51  Aligned_cols=31  Identities=10%  Similarity=0.028  Sum_probs=27.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788885 7889999999999999999998864

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.54  E-value=5.8  Score=30.50  Aligned_cols=74  Identities=7%  Similarity=-0.085  Sum_probs=40.6

Q ss_pred             eEEEEcCCChhHHHHHHH-HHH-C----CCEEEEEeCChhHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEE-LAG-F----GAIIHTCSRNQTELNERLQEWKLK-GLKVTGSVCDLSSREQREKLMETVSSI   84 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~-L~~-~----G~~Vi~~~R~~~~~~~~~~~l~~~-~~~~~~~~~Dlsd~~sv~~~~~~~~~~   84 (367)
                      ++.|.||++ +|...+-. ++. .    +..+++.|.++++++...+..... ........ - ++.   .+.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t-~~~---~~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-S-DTF---EGAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-C-SSH---HHHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-e-cCc---cccc------
Confidence            477888854 55444422 221 1    358999999998877544333221 11222111 1 222   1222      


Q ss_pred             cCCCccEEEEcCCCC
Q 035642           85 FQGKLNLLVNNAAVA   99 (367)
Q Consensus        85 ~~g~iD~lI~~Ag~~   99 (367)
                        ..-|++|..||..
T Consensus        70 --~~aDvVVita~~~   82 (162)
T d1up7a1          70 --VDAKYVIFQFRPG   82 (162)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --CCCCEEEEecccC
Confidence              4579999999974

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.34  E-value=0.44  Score=40.28  Aligned_cols=31  Identities=19%  Similarity=0.172  Sum_probs=27.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           13 YFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        13 vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 7889999999999999999998854

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.60  E-value=0.48  Score=40.54  Aligned_cols=32  Identities=22%  Similarity=0.287  Sum_probs=27.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCCh
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQ   44 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~   44 (367)
                      .|+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788887 7999999999999997 699998874

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.43  E-value=4.9  Score=31.17  Aligned_cols=74  Identities=11%  Similarity=0.057  Sum_probs=45.3

Q ss_pred             eEEEEc-CCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCcc
Q 035642           12 NYFITG-GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLN   90 (367)
Q Consensus        12 ~vLVTG-as~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD   90 (367)
                      +||=.| |+|++|.    +++.+|++|+.++.++...+.+.+.++..+....+...   +.+..   ........ .+.|
T Consensus        44 ~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d~~---~~~~~~~~-~~fD  112 (171)
T d1ws6a1          44 RFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEVF---LPEAKAQG-ERFT  112 (171)
T ss_dssp             EEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHHH---HHHHHHTT-CCEE
T ss_pred             eEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehhcc---cccccccC-Cccc
Confidence            666444 5555554    45677999999999999888887777665543333332   22222   22222222 5799


Q ss_pred             EEEEcC
Q 035642           91 LLVNNA   96 (367)
Q Consensus        91 ~lI~~A   96 (367)
                      +++.+.
T Consensus       113 ~If~DP  118 (171)
T d1ws6a1         113 VAFMAP  118 (171)
T ss_dssp             EEEECC
T ss_pred             eeEEcc
Confidence            998875

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=83.41  E-value=1.8  Score=35.68  Aligned_cols=72  Identities=13%  Similarity=-0.077  Sum_probs=51.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||-.|+++|--.+   .|++.+.+|+.+.++++-.+.+.+.+.. ..++.++..|..+--         . .. ++.|.
T Consensus        73 ~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g~---------~-~~-~pfD~  137 (224)
T d1vbfa_          73 KVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLGY---------E-EE-KPYDR  137 (224)
T ss_dssp             EEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGCC---------G-GG-CCEEE
T ss_pred             eEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhcc---------h-hh-hhHHH
Confidence            99999988885444   3555567999999998877766655543 457888888865310         0 11 68999


Q ss_pred             EEEcCCC
Q 035642           92 LVNNAAV   98 (367)
Q Consensus        92 lI~~Ag~   98 (367)
                      ++.+++.
T Consensus       138 Iiv~~a~  144 (224)
T d1vbfa_         138 VVVWATA  144 (224)
T ss_dssp             EEESSBB
T ss_pred             HHhhcch
Confidence            9988875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=83.11  E-value=0.33  Score=39.30  Aligned_cols=31  Identities=23%  Similarity=0.446  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChhHH-----HHHHHHHHCCCEEEEEe
Q 035642           11 QNYFITGGTRGIGH-----AIVEELAGFGAIIHTCS   41 (367)
Q Consensus        11 ~~vLVTGas~GIG~-----aia~~L~~~G~~Vi~~~   41 (367)
                      |++.|||-+.|.|+     .+|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            47899999989987     67888999999999986

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.02  E-value=0.53  Score=35.44  Aligned_cols=76  Identities=12%  Similarity=0.056  Sum_probs=51.5

Q ss_pred             CCeEEEEcCC----------ChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Q 035642           10 EQNYFITGGT----------RGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLME   79 (367)
Q Consensus        10 ~~~vLVTGas----------~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~   79 (367)
                      .++|||.|+.          ..-+.+.++.|.+.|++++++..|++....-.+    ...++.+.+   -..+.+.++++
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----~aD~lYfeP---lt~e~v~~Ii~   79 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----MADATYIEP---IHWEVVRKIIE   79 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----GSSEEECSC---CCHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----hcceeeeec---CCHHHHHHHHH
Confidence            3489999985          245678899999999999999998865422111    133444433   33566666665


Q ss_pred             HHHHHcCCCccEEEEcCCC
Q 035642           80 TVSSIFQGKLNLLVNNAAV   98 (367)
Q Consensus        80 ~~~~~~~g~iD~lI~~Ag~   98 (367)
                      +      .++|.++-..|.
T Consensus        80 ~------E~pd~il~~~GG   92 (127)
T d1a9xa3          80 K------ERPDAVLPTMGG   92 (127)
T ss_dssp             H------HCCSEEECSSSH
T ss_pred             H------hCcCCeEEEeee
Confidence            4      468999887773

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=6.6  Score=29.98  Aligned_cols=63  Identities=16%  Similarity=0.165  Sum_probs=40.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCEEEEE--eCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGF--GAIIHTC--SRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETV   81 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~--G~~Vi~~--~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~   81 (367)
                      ++.|-|+||.||..+..-..+.  .++|++.  .++.+.+.+...++   ..+..++    .|++....+.+.+
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f---~pk~v~i----~d~~~~~~l~~~l   69 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF---SPRYAVM----DDEASAKLLKTML   69 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH---CCSEEEE----SSHHHHHHHHHHH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH---hhccccc----ccHHHHHHHHHHh
Confidence            6899999999999999988876  4677654  45556666655555   4444333    3454444444333

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.92  E-value=0.95  Score=37.25  Aligned_cols=34  Identities=18%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      .++|+|.|| |-.|...|..|+++|++|.++.++.
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            348999998 6789999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.83  E-value=1.3  Score=35.24  Aligned_cols=38  Identities=18%  Similarity=0.255  Sum_probs=31.7

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhH
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTE   46 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~   46 (367)
                      ++.+ ++.|.| .|.||+++++.+..-|.+|+..++....
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            4556 777776 5999999999999999999999987654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.69  E-value=1  Score=35.67  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=32.8

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCC
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRN   43 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~   43 (367)
                      ++.| .++|.|-|.=+|+-++..|+++|++|..+..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            6777 99999999999999999999999999988755

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=81.57  E-value=0.7  Score=39.25  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++|+|.|| |--|..+|..|+++|++|.++.++.
T Consensus        31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            48999998 6779999999999999999998764

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=81.38  E-value=11  Score=29.74  Aligned_cols=140  Identities=14%  Similarity=0.124  Sum_probs=74.2

Q ss_pred             CCeEEEEcCCC---hhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Q 035642           10 EQNYFITGGTR---GIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQ   86 (367)
Q Consensus        10 ~~~vLVTGas~---GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~   86 (367)
                      .+.++|.+..+   ..+.+++..|.+.|..|+.+.-+.+                       .+.+.   +.+.+ ... 
T Consensus        24 ~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~~~~-~~~-   75 (209)
T d2fr1a2          24 DGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LAERL-RSV-   75 (209)
T ss_dssp             CSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HHHHH-TTS-
T ss_pred             CCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HHHHh-hcc-
Confidence            45555554333   4667788888888887766543321                       12222   22222 222 


Q ss_pred             CCccEEEEcCCCCCCCCccCCCHHHHHHhHHHhhHHHHHHHHHHHHHHHcCCCCEEEEecCcccccCCCCCccHHHHHHH
Q 035642           87 GKLNLLVNNAAVAVPKEALDTTAEYMSTLRSTNFESVFHLSKLAHPLLKASGNGIIVFISSVAGVTAAPLTPLYGPYNGA  166 (367)
Q Consensus        87 g~iD~lI~~Ag~~~~~~~~~~~~e~~~~~~~vNv~g~~~l~~~~~~~m~~~~~g~IV~iSS~~~~~~~~~~~~Y~asKaa  166 (367)
                      +.++.+||..+......-.  .     ......+...+.++|++..   .....++.+++..+..... +...-....++
T Consensus        76 ~~~~~vv~l~~~~~~~~~~--~-----~~~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~~~-~d~~~~p~~A~  144 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAEPEE--A-----PLALASLADTLSLVQAMVS---AELGCPLWTVTESAVATGP-FERVRNAAHGA  144 (209)
T ss_dssp             CCCSEEEECTTTTCCCCSS--C-----GGGCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCSST-TSCCSCGGGHH
T ss_pred             CCCCeEEEeCCCCCCCCcc--h-----hHHHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCcccCC-CcccCCHhHHh
Confidence            6789999987764332111  1     0112234555666676643   2233556665543322221 11222345789


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEE
Q 035642          167 MNQLTKHLECEQAKDNIRANSI  188 (367)
Q Consensus       167 l~~l~~~la~e~~~~gIrvn~I  188 (367)
                      +-+|+|+++.|+....+++..+
T Consensus       145 l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         145 LWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHHHHHhCCCceEEEEEC
Confidence            9999999999975433444444

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=80.86  E-value=1.2  Score=35.52  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=31.6

Q ss_pred             CCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            9 NEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         9 ~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      +.+ ++.|.|. |.||+.+++.+..-|++|+..+|+..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            556 8999998 56999999999999999999998753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.47  E-value=0.93  Score=39.40  Aligned_cols=33  Identities=24%  Similarity=0.327  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 035642           11 QNYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQ   44 (367)
Q Consensus        11 ~~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~   44 (367)
                      ++|+|.|| |--|..+|..|+++|++|.++.++.
T Consensus         3 KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           3 KKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            47888887 6789999999999999999998765

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=80.44  E-value=0.74  Score=37.42  Aligned_cols=37  Identities=22%  Similarity=0.290  Sum_probs=31.6

Q ss_pred             CCCC-eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChh
Q 035642            8 SNEQ-NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQT   45 (367)
Q Consensus         8 ~~~~-~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~   45 (367)
                      ++.+ ++.|.|. |.||+.+++.|..-|++|+..++...
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4555 8888876 89999999999999999999998654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.35  E-value=3.4  Score=35.38  Aligned_cols=71  Identities=13%  Similarity=0.115  Sum_probs=48.7

Q ss_pred             CC-eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Q 035642           10 EQ-NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRNQTELNERLQEWKLK--GLKVTGSVCDLSSREQREKLMETVSSIF   85 (367)
Q Consensus        10 ~~-~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~~~~~~~~~~~l~~~--~~~~~~~~~Dlsd~~sv~~~~~~~~~~~   85 (367)
                      ++ +||-.|++.|+   ++..+++.|+ +|++++.++.. ..+.+.....  ..++.++..|+.+...          ..
T Consensus        35 ~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~~  100 (311)
T d2fyta1          35 KDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------PV  100 (311)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------SC
T ss_pred             CcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------cc
Confidence            44 89999988875   4666778897 79999988754 3333433333  4578888888876421          01


Q ss_pred             CCCccEEEEc
Q 035642           86 QGKLNLLVNN   95 (367)
Q Consensus        86 ~g~iD~lI~~   95 (367)
                       .++|+++..
T Consensus       101 -~~~D~Ivse  109 (311)
T d2fyta1         101 -EKVDVIISE  109 (311)
T ss_dssp             -SCEEEEEEC
T ss_pred             -ccceEEEEe
Confidence             579999875

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.20  E-value=0.74  Score=43.37  Aligned_cols=31  Identities=16%  Similarity=0.201  Sum_probs=27.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGA-IIHTCSRN   43 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~-~Vi~~~R~   43 (367)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            7999987 7999999999999997 78888664

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.11  E-value=2.1  Score=34.73  Aligned_cols=75  Identities=13%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCccE
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGLKVTGSVCDLSSREQREKLMETVSSIFQGKLNL   91 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~iD~   91 (367)
                      +||=.|++.|.-...+..+...| +|++++.+++.++.+.+..+.. .++.++..|..++......+        ..+|+
T Consensus        59 ~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~--------~~vd~  128 (209)
T d1nt2a_          59 RVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV--------EKVDL  128 (209)
T ss_dssp             EEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC--------CCEEE
T ss_pred             EEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCcccccccc--------ceEEE
Confidence            99999988774333333333445 9999999999888877766554 47888888988866543332        45777


Q ss_pred             EEEcC
Q 035642           92 LVNNA   96 (367)
Q Consensus        92 lI~~A   96 (367)
                      ++++-
T Consensus       129 v~~~~  133 (209)
T d1nt2a_         129 IYQDI  133 (209)
T ss_dssp             EEECC
T ss_pred             EEecc
Confidence            77653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.07  E-value=3.9  Score=29.41  Aligned_cols=34  Identities=15%  Similarity=0.188  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCEEEEEeCCh
Q 035642           10 EQNYFITGGTRGIGHAIVEELAG---FGAIIHTCSRNQ   44 (367)
Q Consensus        10 ~~~vLVTGas~GIG~aia~~L~~---~G~~Vi~~~R~~   44 (367)
                      .++++|.|| |.+|.++|..|.+   .|.+|.++.|++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            358889887 8999999987654   488999998864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.02  E-value=1  Score=36.04  Aligned_cols=37  Identities=8%  Similarity=0.122  Sum_probs=29.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 035642           12 NYFITGGTRGIGHAIVEELAGFGAIIHTCSRNQTELNER   50 (367)
Q Consensus        12 ~vLVTGas~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~   50 (367)
                      ++.|.| .|.+|..+|..| ++|++|++.|-++++.+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            366776 799999999766 5799999999998776554

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=80.02  E-value=1.8  Score=36.87  Aligned_cols=75  Identities=16%  Similarity=0.099  Sum_probs=54.7

Q ss_pred             eEEEEc-CCChhHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCc
Q 035642           12 NYFITG-GTRGIGHAIVEELAGFGAIIHTCSRNQTELNERLQEWKLKGL-KVTGSVCDLSSREQREKLMETVSSIFQGKL   89 (367)
Q Consensus        12 ~vLVTG-as~GIG~aia~~L~~~G~~Vi~~~R~~~~~~~~~~~l~~~~~-~~~~~~~Dlsd~~sv~~~~~~~~~~~~g~i   89 (367)
                      ++|=.| |||-||.+++..+  ..++|++++.++..++-+.+.....+. ++.++..|+.+.-            .+.++
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~~~f  176 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AGQQF  176 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TTCCE
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CCCce
Confidence            666666 5566777776654  467999999999988887777766554 5899999986531            11579


Q ss_pred             cEEEEcCCCCC
Q 035642           90 NLLVNNAAVAV  100 (367)
Q Consensus        90 D~lI~~Ag~~~  100 (367)
                      |++|.|.-...
T Consensus       177 DlIvsNPPYi~  187 (274)
T d2b3ta1         177 AMIVSNPPYID  187 (274)
T ss_dssp             EEEEECCCCBC
T ss_pred             eEEEecchhhh
Confidence            99999976543