Query 035643
Match_columns 159
No_of_seqs 123 out of 2111
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 07:45:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035643.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035643hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.4E-36 1.2E-40 188.4 10.3 140 1-145 21-160 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 2.7E-35 9.2E-40 196.8 11.2 153 1-159 70-222 (269)
3 1oy3_D Transcription factor in 100.0 6.1E-33 2.1E-37 186.0 8.8 154 2-159 63-262 (282)
4 3hra_A Ankyrin repeat family p 100.0 1.8E-32 6.1E-37 175.7 10.2 153 2-159 24-182 (201)
5 1yyh_A HN1;, notch 1, ankyrin 100.0 7E-33 2.4E-37 183.6 8.2 151 3-158 76-226 (253)
6 1ikn_D Protein (I-kappa-B-alph 100.0 6E-32 2.1E-36 177.4 12.2 147 8-159 36-188 (236)
7 3aji_A 26S proteasome non-ATPa 100.0 1.8E-32 6.3E-37 179.1 9.6 152 2-159 58-209 (231)
8 1sw6_A Regulatory protein SWI6 100.0 7E-33 2.4E-37 189.8 7.8 156 2-159 115-320 (327)
9 2f8y_A Notch homolog 1, transl 100.0 4.2E-32 1.4E-36 176.6 10.8 151 2-157 9-160 (223)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 3.4E-32 1.2E-36 180.3 9.9 154 1-159 40-194 (253)
11 2f8y_A Notch homolog 1, transl 100.0 3.7E-32 1.2E-36 176.9 9.9 154 1-159 42-195 (223)
12 1s70_B 130 kDa myosin-binding 100.0 4.3E-32 1.5E-36 183.5 10.3 153 2-159 58-269 (299)
13 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.9E-32 2.4E-36 168.9 10.3 139 1-144 31-169 (169)
14 4gpm_A Engineered protein OR26 100.0 5.9E-32 2E-36 169.1 9.4 135 19-159 6-140 (169)
15 3v30_A DNA-binding protein rfx 100.0 3.4E-32 1.2E-36 170.7 7.9 150 3-158 21-171 (172)
16 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-31 4.8E-36 175.8 10.8 153 2-159 64-220 (241)
17 3b7b_A Euchromatic histone-lys 100.0 1.2E-31 4.3E-36 175.8 10.6 151 3-158 63-213 (237)
18 3b7b_A Euchromatic histone-lys 100.0 1.4E-31 4.8E-36 175.5 10.5 154 1-159 28-181 (237)
19 2rfa_A Transient receptor pote 100.0 1E-31 3.5E-36 175.7 9.5 153 3-159 22-201 (232)
20 2xai_A ASB-9, ankyrin repeat a 100.0 1.7E-31 5.7E-36 177.8 10.6 149 3-159 55-203 (261)
21 2dzn_A Probable 26S proteasome 100.0 1.2E-31 4E-36 174.9 9.2 152 3-159 55-212 (228)
22 2rfm_A Putative ankyrin repeat 100.0 7.1E-32 2.4E-36 172.0 7.9 145 9-159 27-171 (192)
23 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-31 4E-36 166.6 8.4 139 2-145 23-161 (162)
24 1oy3_D Transcription factor in 100.0 5E-32 1.7E-36 181.6 6.9 153 2-159 27-229 (282)
25 1ikn_D Protein (I-kappa-B-alph 100.0 4.2E-31 1.4E-35 173.3 10.1 155 1-159 62-223 (236)
26 1d9s_A Cyclin-dependent kinase 100.0 6.6E-32 2.2E-36 163.5 5.6 133 7-145 2-135 (136)
27 2xai_A ASB-9, ankyrin repeat a 100.0 4.2E-31 1.4E-35 175.8 9.1 150 2-159 21-170 (261)
28 2dzn_A Probable 26S proteasome 100.0 5.8E-31 2E-35 171.6 9.5 154 3-159 21-178 (228)
29 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-30 4.5E-35 175.5 10.7 151 3-159 78-259 (285)
30 3hra_A Ankyrin repeat family p 100.0 9.6E-31 3.3E-35 167.7 9.4 141 1-144 56-201 (201)
31 3utm_A Tankyrase-1; tankyrase, 100.0 9E-31 3.1E-35 180.1 9.9 152 2-158 76-316 (351)
32 2rfm_A Putative ankyrin repeat 100.0 2.4E-31 8.3E-36 169.5 6.2 138 2-144 53-190 (192)
33 3v31_A Ankyrin repeat family A 100.0 6.5E-31 2.2E-35 164.1 7.7 138 2-144 21-158 (167)
34 1awc_B Protein (GA binding pro 100.0 2.1E-30 7.1E-35 159.7 9.4 133 2-140 20-152 (153)
35 3aji_A 26S proteasome non-ATPa 100.0 2.3E-30 7.9E-35 169.2 10.0 151 3-159 26-176 (231)
36 1bi7_B P16INK4A, MTS1, multipl 100.0 6.8E-31 2.3E-35 162.4 6.9 142 10-158 5-147 (156)
37 4hbd_A KN motif and ankyrin re 100.0 6.8E-31 2.3E-35 176.2 7.4 146 10-159 104-254 (276)
38 3v31_A Ankyrin repeat family A 100.0 2.2E-30 7.5E-35 161.7 9.2 138 16-159 2-139 (167)
39 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-30 4.8E-35 184.4 9.2 152 2-159 230-381 (437)
40 3d9h_A CDNA FLJ77766, highly s 100.0 2.1E-30 7E-35 174.5 9.2 142 10-158 52-193 (285)
41 3twr_A Tankyrase-2; ankyrin re 100.0 3E-30 1E-34 160.8 8.8 141 14-159 5-145 (165)
42 1k1a_A B-cell lymphoma 3-encod 100.0 4.7E-30 1.6E-34 168.5 10.1 150 5-159 34-187 (241)
43 2etb_A Transient receptor pote 100.0 1.9E-31 6.4E-36 176.9 3.4 152 3-159 25-225 (256)
44 1wdy_A 2-5A-dependent ribonucl 100.0 5.3E-30 1.8E-34 171.7 10.1 154 2-159 90-257 (285)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-30 4.6E-35 181.4 7.3 151 3-158 152-349 (373)
46 3twr_A Tankyrase-2; ankyrin re 100.0 4.5E-30 1.6E-34 160.0 8.6 137 3-145 28-164 (165)
47 3f6q_A Integrin-linked protein 100.0 3.2E-30 1.1E-34 162.7 7.8 137 4-145 26-162 (179)
48 3c5r_A BARD-1, BRCA1-associate 100.0 2.7E-30 9.1E-35 156.5 7.0 133 7-145 1-133 (137)
49 3f6q_A Integrin-linked protein 100.0 1.5E-29 5E-34 159.7 10.2 140 15-159 3-142 (179)
50 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-29 6.1E-34 173.7 11.0 155 2-159 43-284 (351)
51 2pnn_A Transient receptor pote 100.0 1E-30 3.5E-35 174.9 4.5 142 13-158 97-270 (273)
52 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-29 4.7E-34 169.7 10.0 152 2-158 23-185 (285)
53 3v30_A DNA-binding protein rfx 100.0 1.1E-29 3.7E-34 159.3 8.7 138 17-159 2-139 (172)
54 3ljn_A Hypothetical protein; a 100.0 1.2E-29 4E-34 175.9 9.3 153 1-159 37-215 (364)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.1E-29 7.1E-34 155.6 9.1 131 6-143 25-155 (156)
56 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-29 5.2E-34 158.3 8.5 141 13-159 10-150 (169)
57 2fo1_E LIN-12 protein; beta-ba 100.0 7.9E-30 2.7E-34 177.5 7.5 135 8-145 226-370 (373)
58 2rfa_A Transient receptor pote 100.0 5.1E-29 1.7E-33 162.9 10.7 139 16-159 2-158 (232)
59 3kea_A K1L; tropism, ANK repea 100.0 3.4E-30 1.2E-34 173.5 5.2 135 3-143 81-217 (285)
60 1awc_B Protein (GA binding pro 100.0 2E-29 7E-34 155.3 7.9 136 17-159 2-137 (153)
61 2jab_A H10-2-G3; HER2, darpin, 100.0 2E-29 6.7E-34 152.6 7.5 128 12-144 9-136 (136)
62 3kea_A K1L; tropism, ANK repea 100.0 8E-30 2.7E-34 171.7 6.2 148 1-158 48-197 (285)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 9.5E-30 3.2E-34 158.0 6.0 139 15-159 3-141 (162)
64 1n0r_A 4ANK, 4 ankyrin repeats 100.0 7E-29 2.4E-33 147.9 9.5 125 16-145 1-125 (126)
65 1n11_A Ankyrin; clathrin, BAND 100.0 4.4E-29 1.5E-33 176.7 10.0 152 2-159 197-348 (437)
66 2etb_A Transient receptor pote 100.0 6.4E-30 2.2E-34 169.5 4.9 128 14-145 87-245 (256)
67 3ljn_A Hypothetical protein; a 100.0 4.7E-29 1.6E-33 172.9 8.0 129 13-145 134-268 (364)
68 2vge_A RELA-associated inhibit 100.0 1E-29 3.5E-34 166.3 4.1 149 1-155 2-156 (229)
69 4b93_B Ankyrin repeat domain-c 100.0 2.3E-29 7.8E-34 168.2 5.9 138 1-143 103-241 (269)
70 3eu9_A Huntingtin-interacting 100.0 2.1E-28 7E-33 160.4 10.3 138 2-143 27-165 (240)
71 4hbd_A KN motif and ankyrin re 100.0 2.8E-29 9.6E-34 168.3 6.3 140 2-146 129-275 (276)
72 3jxi_A Vanilloid receptor-rela 100.0 1.7E-29 5.7E-34 167.9 4.6 135 9-147 85-251 (260)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 4.5E-29 1.5E-33 164.1 6.3 139 1-145 22-163 (239)
74 3jxi_A Vanilloid receptor-rela 100.0 2E-29 6.9E-34 167.4 4.1 151 4-159 29-229 (260)
75 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.4E-28 4.8E-33 151.8 7.3 136 17-159 2-137 (156)
76 2pnn_A Transient receptor pote 100.0 8E-29 2.8E-33 165.7 5.7 149 6-159 39-237 (273)
77 2vge_A RELA-associated inhibit 99.9 3.2E-29 1.1E-33 163.9 3.4 122 2-127 39-162 (229)
78 3ehr_A Osteoclast-stimulating 99.9 1.3E-28 4.6E-33 160.1 4.8 138 11-153 67-204 (222)
79 4g8k_A 2-5A-dependent ribonucl 99.9 8.4E-28 2.9E-32 165.1 8.5 155 1-157 42-204 (337)
80 3eu9_A Huntingtin-interacting 99.9 2.4E-27 8E-32 155.3 9.1 145 10-159 2-146 (240)
81 4g8k_A 2-5A-dependent ribonucl 99.9 5E-27 1.7E-31 161.2 10.1 153 3-158 111-276 (337)
82 1s70_B 130 kDa myosin-binding 99.9 4.5E-27 1.6E-31 158.8 8.5 141 13-159 36-236 (299)
83 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.2E-28 2.8E-32 158.1 4.4 138 14-158 2-140 (239)
84 3t8k_A Uncharacterized protein 99.9 1.7E-27 5.7E-32 151.1 5.5 129 10-143 30-176 (186)
85 3aaa_C Myotrophin, protein V-1 99.9 3.5E-27 1.2E-31 140.3 6.4 114 14-132 4-117 (123)
86 3deo_A Signal recognition part 99.9 4.7E-27 1.6E-31 148.7 6.6 126 13-143 40-165 (183)
87 1sw6_A Regulatory protein SWI6 99.9 8.7E-27 3E-31 159.6 4.8 129 1-132 148-327 (327)
88 3ui2_A Signal recognition part 99.9 3.4E-26 1.2E-30 150.8 4.8 124 14-142 42-181 (244)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 4.6E-26 1.6E-30 140.7 4.4 123 1-129 29-152 (156)
90 3t8k_A Uncharacterized protein 99.9 2.9E-26 9.8E-31 145.4 1.1 137 17-159 6-158 (186)
91 1dcq_A PYK2-associated protein 99.9 9.7E-25 3.3E-29 146.4 7.3 130 17-150 130-267 (278)
92 2jab_A H10-2-G3; HER2, darpin, 99.9 4E-24 1.4E-28 129.1 9.2 106 1-108 31-136 (136)
93 2b0o_E UPLC1; arfgap, structur 99.9 9.5E-25 3.3E-29 147.9 7.0 125 17-145 151-283 (301)
94 2l6b_A NR1C; ankyrin, consensu 99.9 4.6E-24 1.6E-28 125.3 8.5 110 11-125 3-112 (115)
95 1d9s_A Cyclin-dependent kinase 99.9 8.5E-25 2.9E-29 132.1 5.4 107 1-110 29-136 (136)
96 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-23 5.5E-28 118.5 9.8 93 16-110 1-93 (93)
97 3lvq_E ARF-GAP with SH3 domain 99.9 3.9E-24 1.3E-28 153.7 8.8 123 18-145 133-264 (497)
98 3jue_A Arfgap with coiled-coil 99.9 1.6E-24 5.3E-29 150.2 6.4 125 15-144 197-324 (368)
99 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-24 5.9E-29 146.6 5.8 121 2-133 169-298 (301)
100 3c5r_A BARD-1, BRCA1-associate 99.9 3.7E-24 1.3E-28 129.4 6.7 109 46-159 5-113 (137)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.6E-23 9E-28 123.6 8.9 107 2-110 20-126 (126)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.1E-23 7.1E-28 118.1 6.3 92 50-145 1-92 (93)
103 3aaa_C Myotrophin, protein V-1 99.9 1.5E-23 5E-28 124.6 5.5 107 48-159 4-110 (123)
104 2l6b_A NR1C; ankyrin, consensu 99.9 2E-23 6.8E-28 122.5 5.2 108 46-158 4-111 (115)
105 3deo_A Signal recognition part 99.9 3E-23 1E-27 131.2 5.1 119 2-143 62-181 (183)
106 3jue_A Arfgap with coiled-coil 99.9 2.7E-22 9.1E-27 139.0 9.3 129 2-132 218-348 (368)
107 2aja_A Ankyrin repeat family p 99.9 6.3E-24 2.1E-28 147.6 0.1 128 13-144 88-222 (376)
108 3lvq_E ARF-GAP with SH3 domain 99.9 2.4E-22 8.3E-27 144.5 7.7 117 2-129 150-275 (497)
109 3ehr_A Osteoclast-stimulating 99.9 2.3E-22 7.7E-27 130.7 4.6 108 2-111 91-199 (222)
110 1dcq_A PYK2-associated protein 99.9 3E-21 1E-25 129.5 10.1 107 3-111 149-264 (278)
111 2aja_A Ankyrin repeat family p 99.8 6.2E-24 2.1E-28 147.6 -5.1 133 2-145 110-249 (376)
112 2zgd_A 3 repeat synthetic anky 99.8 2.5E-20 8.4E-25 108.5 7.7 94 9-104 16-109 (110)
113 3ui2_A Signal recognition part 99.8 2.8E-20 9.4E-25 122.6 8.4 106 2-110 63-185 (244)
114 2zgd_A 3 repeat synthetic anky 99.8 3.7E-20 1.3E-24 107.8 5.5 92 45-140 18-109 (110)
115 1gp8_A Protein (scaffolding pr 65.5 5.7 0.0002 17.6 2.1 19 20-38 16-34 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.4e-36 Score=188.37 Aligned_cols=140 Identities=31% Similarity=0.365 Sum_probs=130.6
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
|+|++.|+++|.+|.+|.||||+|+..++.++++.|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ...+.
T Consensus 21 ~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~ 98 (169)
T 4gpm_A 21 KDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNA 98 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCC
Confidence 3588999999999999999999999999999999999999998 689999999999999999999999999954 55667
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
++..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 99 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 99 KDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 788999999999999999999999999999 89999999999999999999999999999965
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=196.85 Aligned_cols=153 Identities=24% Similarity=0.257 Sum_probs=139.7
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|+++|.+|.+|.||||+|+..|+.+++++|++.++++ +.++..|.||+++|+..++.+++++|++.+ .....
T Consensus 70 ~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~ 147 (269)
T 4b93_B 70 AKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNK 147 (269)
T ss_dssp -----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCC
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCC-CCCCC
Confidence 3578999999999999999999999999999999999999988 588999999999999999999999999954 55566
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
++..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++ |.+++..+..|+||+
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad---vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL 222 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGAS---INASNNKGNTALHEAVIEKHVFVVELLLLH-GASVQVLNKRQRTAV 222 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCSG
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCccccCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHH
Confidence 788999999999999999999999999999 899999999999999999999999999998 678999999999985
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=6.1e-33 Score=186.01 Aligned_cols=154 Identities=21% Similarity=0.151 Sum_probs=112.1
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCcc--------------------------------------
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEM-------------------------------------- 43 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-------------------------------------- 43 (159)
+|+++|++++..+..|.||||+|+..|+.+++++|++.++..
T Consensus 63 ~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (282)
T 1oy3_D 63 KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142 (282)
T ss_dssp HHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhh
Confidence 466777888877777888888888888888888877765431
Q ss_pred --------ceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccc
Q 035643 44 --------CFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVN 115 (159)
Q Consensus 44 --------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 115 (159)
.+.++..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..++.+++++|++.|++ ++
T Consensus 143 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad---~~ 219 (282)
T 1oy3_D 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD---PT 219 (282)
T ss_dssp -CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TT
T ss_pred hhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---Cc
Confidence 1345667778888888888888888888755444333334588888888888888888888888888 78
Q ss_pred cccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 116 SKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 116 ~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl 262 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAH-GAPEPEDGGDKLSPC 262 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHT-TCCCCCCC-------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHc-CCCcCcCCCcccccc
Confidence 8888888888888888888888888888 557778888888875
No 4
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=1.8e-32 Score=175.74 Aligned_cols=153 Identities=20% Similarity=0.282 Sum_probs=140.0
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|.+.+.+++..|.+|.||||+|+..|+.+++++|++.++++ +.++..|.||+|+|+..++.+++++|++.........
T Consensus 24 ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 102 (201)
T 3hra_A 24 ILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKH 102 (201)
T ss_dssp HHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccc
Confidence 345666699999999999999999999999999999999988 5889999999999999999999999997677777778
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhc-CCccccccccCCCCCHHHHHHHhCC-----cceeeeccCCCccCcccccCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIR-NDHEFVNSKDDNGSTILHLAVLEKQ-----VEVFYMDFDRNNMDNNIFYGCG 155 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~tpl~~a~~~~~-----~~~~~~ll~~~~~~~~~~~~~g 155 (159)
+..|.||||+|+..++.+++++|++.+ .+ ++.+|..|.||||+|+..+. .+++++|+++ +.+++..+..|
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~g 178 (201)
T 3hra_A 103 NRYGGNALIPAAEKGHIDNVKLLLEDGRED---IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN-GADQSIKDNSG 178 (201)
T ss_dssp CTTSCCSHHHHHHTTCHHHHHHHHHHCCCC---TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT-TCCTTCCCTTS
T ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC-CCCCCccCCCC
Confidence 889999999999999999999999998 77 88999999999999999988 8999999999 67888899999
Q ss_pred CCCC
Q 035643 156 LSGY 159 (159)
Q Consensus 156 ~~~~ 159 (159)
+||+
T Consensus 179 ~t~l 182 (201)
T 3hra_A 179 RTAM 182 (201)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 9874
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=7e-33 Score=183.62 Aligned_cols=151 Identities=21% Similarity=0.191 Sum_probs=83.9
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILM 82 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 82 (159)
|++.|++++..|..|.||||+|+..|+.+++++|++.+....+.++..|.||||+|+..++.+++++|++. +......+
T Consensus 76 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d 154 (253)
T 1yyh_A 76 LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVD 154 (253)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBC
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcC
Confidence 44445555555555555555555555555555555544422234444555555555555555555555552 22333445
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|+||
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tp 226 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLP 226 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCccccccCCCCH
Confidence 5566666666666666666666666666 566666666666666666666666666666 44555666666654
No 6
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=6e-32 Score=177.36 Aligned_cols=147 Identities=27% Similarity=0.300 Sum_probs=128.2
Q ss_pred CccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCch-----hhhhhc
Q 035643 8 EQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQ-----AALILM 82 (159)
Q Consensus 8 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~~ 82 (159)
++++..+..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..++.+++++|++.+.. .....+
T Consensus 36 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 36 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 478999999999999999999999999999998887 57888999999999999999999999985532 245567
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccC-CCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDD-NGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
..|.||||+|+..++.+++++|++.|++ ++.++. .|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGAD---VNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPY 188 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHH
Confidence 7789999999999999999999999988 788887 899999999999999999999998 678888888888874
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=1.8e-32 Score=179.12 Aligned_cols=152 Identities=24% Similarity=0.231 Sum_probs=133.5
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++.+ ......
T Consensus 58 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~ 135 (231)
T 3aji_A 58 FLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAK 135 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred HHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCc
Confidence 577888999999999999999999999999999999988887 578888999999999999999999999844 445566
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 136 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 209 (231)
T 3aji_A 136 DHYDATAMHRAAAKGNLKMVHILLFYKAS---TNIQDTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTPL 209 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCC---ccccCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 77899999999999999999999999988 888999999999999999999999999998 668888888998874
No 8
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=7e-33 Score=189.84 Aligned_cols=156 Identities=20% Similarity=0.206 Sum_probs=137.4
Q ss_pred ccccCCCcccc-ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCC---HHHHHHHHhcCchh
Q 035643 2 ILRRKPEQAGE-LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGN---VNVLKELVKVRPQA 77 (159)
Q Consensus 2 ll~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~l~~~~~~~ 77 (159)
+|++.|++++. .|..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..|+ .++++.|++.....
T Consensus 115 ~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~ 193 (327)
T 1sw6_A 115 AFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193 (327)
T ss_dssp HCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred HHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc
Confidence 57889999999 8999999999999999999999999999998 6899999999999999988 56777777755456
Q ss_pred hhhhccCCCCchhhhhh----cCChhHHHHHHhhcC--------------------Ccc---------------------
Q 035643 78 ALILMERGVTILHACVN----YNQLESLRLLVEIRN--------------------DHE--------------------- 112 (159)
Q Consensus 78 ~~~~~~~~~t~l~~a~~----~~~~~~~~~Ll~~~~--------------------~~~--------------------- 112 (159)
....+..|.||||+|+. .++.+++++|++.+. +..
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~ 273 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA 273 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHH
Confidence 67788899999999999 899999999988643 100
Q ss_pred -ccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 113 -FVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 113 -~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.++.+|..|+||||+|+..|+.+++++|+++ +.+++..+..|+||+
T Consensus 274 ~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL 320 (327)
T 1sw6_A 274 NMLNAQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPV 320 (327)
T ss_dssp HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGG
T ss_pred hCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHH
Confidence 1677889999999999999999999999998 778999999999985
No 9
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=4.2e-32 Score=176.58 Aligned_cols=151 Identities=22% Similarity=0.229 Sum_probs=76.7
Q ss_pred ccccCCCccccc-cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 2 ILRRKPEQAGEL-DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 2 ll~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+|++.|.+++.. |.+|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++.+......
T Consensus 9 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 87 (223)
T 2f8y_A 9 DFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA 87 (223)
T ss_dssp TTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC
T ss_pred HHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 345555555543 455556666666555566665555555554 345555555555555555555555555544333333
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLS 157 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~ 157 (159)
.+..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.|
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t 160 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREET 160 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCC
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcC
Confidence 444444555555554444455554444444 444444444444444444444444444444 3344444444444
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=3.4e-32 Score=180.35 Aligned_cols=154 Identities=21% Similarity=0.222 Sum_probs=132.7
Q ss_pred CccccCCCcccc-ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhh
Q 035643 1 EILRRKPEQAGE-LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAAL 79 (159)
Q Consensus 1 ~ll~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 79 (159)
++|++.|++++. .|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++.+.....
T Consensus 40 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~ 118 (253)
T 1yyh_A 40 SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118 (253)
T ss_dssp ------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT
T ss_pred HHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 357788888865 4899999999999999999999999999988 68899999999999999999999999997765777
Q ss_pred hhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 80 ILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 80 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
..+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 119 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL 194 (253)
T 1yyh_A 119 ARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPL 194 (253)
T ss_dssp CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC---TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcChHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 7788999999999999999999999999999 899999999999999999999999999999 678888899998874
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=3.7e-32 Score=176.85 Aligned_cols=154 Identities=20% Similarity=0.181 Sum_probs=139.6
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..|..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..++.+++++|++. +.....
T Consensus 42 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~ 120 (223)
T 2f8y_A 42 KRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNA 120 (223)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTC
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcC
Confidence 3578899999999999999999999999999999999998844478899999999999999999999999994 455556
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 195 (223)
T 2f8y_A 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPR 195 (223)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCHH
Confidence 778899999999999999999999999999 889999999999999999999999999999 568888888888863
No 12
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=4.3e-32 Score=183.48 Aligned_cols=153 Identities=25% Similarity=0.272 Sum_probs=137.0
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhh--
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAAL-- 79 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~-- 79 (159)
+|++.|++++..|..|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.+.....
T Consensus 58 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~ 136 (299)
T 1s70_B 58 RLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136 (299)
T ss_dssp HHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcC
Confidence 577889999999999999999999999999999999999988 57899999999999999999999999985432210
Q ss_pred ---------------------------------------------------------hhccCCCCchhhhhhcCChhHHH
Q 035643 80 ---------------------------------------------------------ILMERGVTILHACVNYNQLESLR 102 (159)
Q Consensus 80 ---------------------------------------------------------~~~~~~~t~l~~a~~~~~~~~~~ 102 (159)
..+..|.||||+|+..|+.++++
T Consensus 137 ~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 216 (299)
T 1s70_B 137 SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216 (299)
T ss_dssp TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHH
Confidence 01245889999999999999999
Q ss_pred HHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 103 LLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 103 ~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 217 ~Ll~~g~d---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l 269 (299)
T 1s70_B 217 LLIQARYD---VNIKDYDGWTPLHAAAHWGKEEACRILVEN-LCDMEAVNKVGQTAF 269 (299)
T ss_dssp HHHTTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTT
T ss_pred HHHHcCCC---CCCcCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 99999999 899999999999999999999999999999 678899999999986
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=6.9e-32 Score=168.94 Aligned_cols=139 Identities=27% Similarity=0.349 Sum_probs=123.1
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++.+ .....
T Consensus 31 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~ 108 (169)
T 2y1l_E 31 RILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNA 108 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCC
Confidence 3577889999999999999999999999999999999998887 578889999999999999999999999944 45556
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
.+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..++.+++++|++.|
T Consensus 109 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 677899999999999999999999999988 8889999999999999999999999998764
No 14
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=5.9e-32 Score=169.14 Aligned_cols=135 Identities=31% Similarity=0.341 Sum_probs=125.9
Q ss_pred CHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCCh
Q 035643 19 SPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQL 98 (159)
Q Consensus 19 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~ 98 (159)
++|+.|+..|+.++|+.|++.++++ +.+|..|.||+|+|+..++.+++++|++.+ .....++..|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCH
Confidence 3699999999999999999999998 689999999999999999999999999954 55667788999999999999999
Q ss_pred hHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 99 ESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 99 ~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++ +.+++..+..|+||+
T Consensus 84 ~~v~~Ll~~gad---vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL 140 (169)
T 4gpm_A 84 EVVKLLISKGAD---VNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPL 140 (169)
T ss_dssp HHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred HHHHHHHHCcCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHH
Confidence 999999999999 899999999999999999999999999998 678899999999974
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.4e-32 Score=170.71 Aligned_cols=150 Identities=20% Similarity=0.139 Sum_probs=128.7
Q ss_pred cccCCCc-cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 3 LRRKPEQ-AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 3 l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
|++.+.. ++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. +......
T Consensus 21 ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 98 (172)
T 3v30_A 21 HLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLER-DVDINIY 98 (172)
T ss_dssp HHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCC
T ss_pred HHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCC
Confidence 4455555 8999999999999999999999999999999988 68899999999999999999999999995 4555667
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..++.+++++|+++ +.+....+..|.||
T Consensus 99 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 99 DWNGGTPLLYAVRGNHVKCVEALLARGAD---LTTEADSGYTPMDLAVALGYRKVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHHHSCC-------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHhCcHHHHHHHHHH-HHHHhcccCCCCCC
Confidence 88899999999999999999999999999 899999999999999999999999999998 44555566666665
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.4e-31 Score=175.81 Aligned_cols=153 Identities=20% Similarity=0.207 Sum_probs=111.2
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCC----ccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNP----EMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA 77 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 77 (159)
+|++.|++++..+..|.||||+|+..++.+++++|++.+. +. +..+..|.||||+|+..++.+++++|++.+...
T Consensus 64 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 142 (241)
T 1k1a_A 64 LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGADI 142 (241)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 4556666666666666666666666666666666666554 33 355666667777777777777777777644333
Q ss_pred hhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCC
Q 035643 78 ALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLS 157 (159)
Q Consensus 78 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~ 157 (159)
....+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.|
T Consensus 143 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t 218 (241)
T 1k1a_A 143 DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN---VNAQMYSGSSALHSASGRGLLPLVRTLVRS-GADSSLKNCHNDT 218 (241)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCcCCCCCC
Confidence 322226688888888888888888888888888 788888889999999988899999888887 5677888888888
Q ss_pred CC
Q 035643 158 GY 159 (159)
Q Consensus 158 ~~ 159 (159)
|+
T Consensus 219 pl 220 (241)
T 1k1a_A 219 PL 220 (241)
T ss_dssp TT
T ss_pred HH
Confidence 75
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.2e-31 Score=175.78 Aligned_cols=151 Identities=21% Similarity=0.218 Sum_probs=83.6
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILM 82 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 82 (159)
|++.|++++..+..|.||||+|+..|+.+++++|++.++...+..+..|.||+|+|+..++.+++++|++.+ ......+
T Consensus 63 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~ 141 (237)
T 3b7b_A 63 LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRD 141 (237)
T ss_dssp HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccC
Confidence 444455555555555555555555555555555555442222344445555555555555555555555522 2233344
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|+||
T Consensus 142 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~ 213 (237)
T 3b7b_A 142 NEENICLHWAAFSGCVDIAEILLAAKCD---LHAVNIHGDSPLHIAARENRYDCVVLFLSR-DSDVTLKNKEGETP 213 (237)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHTTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCCHhHHHHHHHc-CCCCCccCCCCCCH
Confidence 5566666666666666666666666666 566666666666666666666666666666 44566666666665
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.4e-31 Score=175.53 Aligned_cols=154 Identities=21% Similarity=0.261 Sum_probs=143.0
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||+|+|+..++.+++++|++.+......
T Consensus 28 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~ 106 (237)
T 3b7b_A 28 HMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC 106 (237)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTC
T ss_pred HHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc
Confidence 3578899999999999999999999999999999999999987 678999999999999999999999999976567777
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++. +.+++..+..|.||+
T Consensus 107 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L 181 (237)
T 3b7b_A 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSD---INIRDNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNIHGDSPL 181 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCTTCCCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 788899999999999999999999999999 889999999999999999999999999999 568888888898874
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1e-31 Score=175.73 Aligned_cols=153 Identities=24% Similarity=0.324 Sum_probs=133.2
Q ss_pred cccC-CCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccc----eecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh
Q 035643 3 LRRK-PEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMC----FARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA 77 (159)
Q Consensus 3 l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 77 (159)
|++. |++++.+|..|.||||+|+..|+.+++++|++.+++.. +..+..|.||||+|+..++.+++++|++.+...
T Consensus 22 Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 101 (232)
T 2rfa_A 22 LLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV 101 (232)
T ss_dssp HHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 4555 99999999999999999999999999999999988753 345678999999999999999999999965443
Q ss_pred hhhhc-------------cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCccee----eec
Q 035643 78 ALILM-------------ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVF----YMD 140 (159)
Q Consensus 78 ~~~~~-------------~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~----~~l 140 (159)
. ..+ ..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.+++ ++|
T Consensus 102 ~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~L 177 (232)
T 2rfa_A 102 S-ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD---IRAQDSLGNTVLHILILQPNKTFACQMYNLL 177 (232)
T ss_dssp T-CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHH
T ss_pred C-cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCChHHHHHHHHHH
Confidence 3 333 2699999999999999999999999999 899999999999999999999988 999
Q ss_pred cCCCccCc-----ccccCCCCCCC
Q 035643 141 FDRNNMDN-----NIFYGCGLSGY 159 (159)
Q Consensus 141 l~~~~~~~-----~~~~~~g~~~~ 159 (159)
++.+.... +..+..|+||+
T Consensus 178 l~~g~~~~~~~~~~~~~~~g~tpl 201 (232)
T 2rfa_A 178 LSYDGGDHLKSLELVPNNQGLTPF 201 (232)
T ss_dssp HHTTCSCSSCCGGGCCCTTSCCHH
T ss_pred HhcCCchhhhhhhccCCCCCCCHH
Confidence 99966443 57888898874
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=177.79 Aligned_cols=149 Identities=21% Similarity=0.193 Sum_probs=93.4
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILM 82 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 82 (159)
|++.|++++..|..|.||||+|+..|+.++++.|++.++++. .+..|.||+|+|+..++.+++++|++.+ ......+
T Consensus 55 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 131 (261)
T 2xai_A 55 LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKI 131 (261)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCB
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCC
Confidence 344444455444445555555555555555555554444431 2233445555555555555555555522 3334456
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
..|.||||+|+..++.+++++|++.|++ ++ .+..|.||||+|+..++.+++++|++. +.+++..+..|+||+
T Consensus 132 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpl 203 (261)
T 2xai_A 132 SHLGTPLYLACENQQRACVKKLLESGAD---VN-QGKGQDSPLHAVARTASEELACLLMDF-GADTQAKNAEGKRPV 203 (261)
T ss_dssp TTTBCHHHHHHHTTCHHHHHHHHHHTCC---TT-CCBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCGG
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCC---CC-CCCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCChh
Confidence 6677888888888888888888887777 55 377788888888888888888888887 567778888888874
No 21
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=1.2e-31 Score=174.94 Aligned_cols=152 Identities=21% Similarity=0.232 Sum_probs=91.5
Q ss_pred cccCC--Ccccc-ccCCCCCHHHHHHHhCChHHHHHHhhcC--CccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh
Q 035643 3 LRRKP--EQAGE-LDSRKASPLHLAAAKGYLDIVLKLVSVN--PEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA 77 (159)
Q Consensus 3 l~~~~--~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 77 (159)
|++.| .+++. .+..|.||||+|+..|+.+++++|++.+ .+. +..+..|.||||+|+..++.+++++|++. +..
T Consensus 55 Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~ 132 (228)
T 2dzn_A 55 LLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIEN-GAS 132 (228)
T ss_dssp HHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred HHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCC
Confidence 44555 44444 5556666666666666666666666655 444 34555666666666666666666666663 333
Q ss_pred hhhhccCCCCchhhhhhcCChhHHHHHHhhc-CCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCC
Q 035643 78 ALILMERGVTILHACVNYNQLESLRLLVEIR-NDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGL 156 (159)
Q Consensus 78 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~ 156 (159)
....+..|.||||+|+..++.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|++..+.+++..+..|+
T Consensus 133 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA---VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 209 (228)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc---ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 3444555666666666666666666666666 55 5666666666666666666666666666333556666666666
Q ss_pred CCC
Q 035643 157 SGY 159 (159)
Q Consensus 157 ~~~ 159 (159)
||+
T Consensus 210 t~l 212 (228)
T 2dzn_A 210 KAE 212 (228)
T ss_dssp BGG
T ss_pred cHH
Confidence 653
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=7.1e-32 Score=172.03 Aligned_cols=145 Identities=21% Similarity=0.171 Sum_probs=129.7
Q ss_pred ccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCc
Q 035643 9 QAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTI 88 (159)
Q Consensus 9 ~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 88 (159)
.++.+|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++.+ ......+..|.||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~ 104 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGKTP 104 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcH
Confidence 46778999999999999999999999999998877 578889999999999999999999999955 4455667789999
Q ss_pred hhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGAN---VNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAE 171 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHH
Confidence 9999999999999999999999 888999999999999999999999999998 678888888888874
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.2e-31 Score=166.64 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=126.8
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..+..|.||||+|+. |+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++.+ ......
T Consensus 23 ~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 99 (162)
T 1ihb_A 23 SLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIE 99 (162)
T ss_dssp HHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC
T ss_pred HHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCc
Confidence 5778999999999999999999999 9999999999999888 588999999999999999999999999954 555667
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
+..|.||||+|+..++.+++++|++.+++. ++.++..|.||+|+|+..|+.+++++|+++|+
T Consensus 100 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 100 DNEGNLPLHLAAKEGHLRVVEFLVKHTASN--VGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHccCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 888999999999999999999999999874 47889999999999999999999999999864
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=5e-32 Score=181.59 Aligned_cols=153 Identities=25% Similarity=0.234 Sum_probs=135.2
Q ss_pred ccccCCCc---cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCch--
Q 035643 2 ILRRKPEQ---AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQ-- 76 (159)
Q Consensus 2 ll~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-- 76 (159)
+|++.|++ ++.++..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..++.+++++|++.+..
T Consensus 27 ~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~ 105 (282)
T 1oy3_D 27 FLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHP 105 (282)
T ss_dssp HHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSC
T ss_pred HHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCc
Confidence 46666776 8899999999999999999999999999999988 58899999999999999999999999984432
Q ss_pred --------------------------------------------hhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCcc
Q 035643 77 --------------------------------------------AALILMERGVTILHACVNYNQLESLRLLVEIRNDHE 112 (159)
Q Consensus 77 --------------------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 112 (159)
.....+..|.||||+|+..++.+++++|++.|++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-- 183 (282)
T 1oy3_D 106 RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-- 183 (282)
T ss_dssp CCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--
T ss_pred hhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC--
Confidence 1334567899999999999999999999999999
Q ss_pred ccccccCC-CCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 113 FVNSKDDN-GSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 113 ~~~~~~~~-~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
++.++.. |.||||+|+..|+.+++++|+++ +.+++..+..|+||+
T Consensus 184 -~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 184 -LNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPL 229 (282)
T ss_dssp -TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred -CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHH
Confidence 7888754 99999999999999999999999 678999999999874
No 25
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=4.2e-31 Score=173.33 Aligned_cols=155 Identities=23% Similarity=0.198 Sum_probs=136.3
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCcc-----ceecCCCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEM-----CFARDIDGKNPLHIAAIRGNVNVLKELVKVRP 75 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~ 75 (159)
++|++.|++++..|..|.||||+|+..|+.+++++|++.+.+. .+..+..|.||||+|+..++.+++++|++.+.
T Consensus 62 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 141 (236)
T 1ikn_D 62 EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA 141 (236)
T ss_dssp HCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4688999999999999999999999999999999999987642 35678889999999999999999999999664
Q ss_pred hhhhhhcc-CCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCc-ccccC
Q 035643 76 QAALILME-RGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDN-NIFYG 153 (159)
Q Consensus 76 ~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~-~~~~~ 153 (159)
.. ...+. .|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..++.+++++|+++|.... ...+.
T Consensus 142 ~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~ 217 (236)
T 1ikn_D 142 DV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD---VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 217 (236)
T ss_dssp CT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC---SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCC
T ss_pred CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCcc
Confidence 44 44554 899999999999999999999999999 89999999999999999999999999999976333 36666
Q ss_pred CCCCCC
Q 035643 154 CGLSGY 159 (159)
Q Consensus 154 ~g~~~~ 159 (159)
.|.+++
T Consensus 218 ~~~~~~ 223 (236)
T 1ikn_D 218 EDEESY 223 (236)
T ss_dssp CTTTCC
T ss_pred chHHHH
Confidence 777664
No 26
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=6.6e-32 Score=163.48 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=123.1
Q ss_pred CCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccC-C
Q 035643 7 PEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMER-G 85 (159)
Q Consensus 7 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~ 85 (159)
+++++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+. ++.+++++|++.+ ......+.. |
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g 78 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATL 78 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCC
Confidence 6789999999999999999999999999999999887 6889999999999999 9999999999955 445566777 9
Q ss_pred CCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 86 VTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 86 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|.
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGAR---LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCC---CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999 89999999999999999999999999998743
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=4.2e-31 Score=175.83 Aligned_cols=150 Identities=19% Similarity=0.146 Sum_probs=134.8
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..|.+|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+.... .
T Consensus 21 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~ 97 (261)
T 2xai_A 21 NLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--P 97 (261)
T ss_dssp HHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--C
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--C
Confidence 577899999999999999999999999999999999999988 6889999999999999999999999999654433 2
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|++.+ .+++. +..|.||+
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-~~~g~t~L 170 (261)
T 2xai_A 98 ESDLASPIHEAARRGHVECVNSLIAYGGN---IDHKISHLGTPLYLACENQQRACVKKLLESG-ADVNQ-GKGQDSPL 170 (261)
T ss_dssp SCTTCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT-CCTTC-CBTTBCHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCC-CCCCCChH
Confidence 45689999999999999999999999999 8999999999999999999999999999984 45553 67777763
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=5.8e-31 Score=171.64 Aligned_cols=154 Identities=23% Similarity=0.188 Sum_probs=136.3
Q ss_pred cccCCCccc-cccCCCCCHHHHHHHhCChHHHHHHhhcC--CccceecCCCCCcHHHHHHHhCCHHHHHHHHhcC-chhh
Q 035643 3 LRRKPEQAG-ELDSRKASPLHLAAAKGYLDIVLKLVSVN--PEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVR-PQAA 78 (159)
Q Consensus 3 l~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~-~~~~ 78 (159)
|++.+.++. ..|..|.||||+|+..|+.+++++|++.+ .+.....+..|.||||+|+..++.+++++|++.+ ....
T Consensus 21 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 100 (228)
T 2dzn_A 21 LLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL 100 (228)
T ss_dssp HHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT
T ss_pred HHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc
Confidence 445555544 48999999999999999999999999998 5553337889999999999999999999999954 2455
Q ss_pred hhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 79 LILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 79 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
...+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.+..+++..+..|+||
T Consensus 101 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~ 177 (228)
T 2dzn_A 101 NKITNQGVTCLHLAVGKKWFEVSQFLIENGAS---VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177 (228)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCH
T ss_pred ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCH
Confidence 66778899999999999999999999999999 899999999999999999999999999999778999999999987
Q ss_pred C
Q 035643 159 Y 159 (159)
Q Consensus 159 ~ 159 (159)
+
T Consensus 178 L 178 (228)
T 2dzn_A 178 L 178 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=175.47 Aligned_cols=151 Identities=21% Similarity=0.161 Sum_probs=91.1
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcC--------
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVR-------- 74 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~-------- 74 (159)
|++.|++++.+|.+|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++.+
T Consensus 78 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (285)
T 3d9h_A 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD 156 (285)
T ss_dssp HHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC
Confidence 44455555555555555555555555555555555555444 344445555555555555555555444422
Q ss_pred -----------------------chhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHh
Q 035643 75 -----------------------PQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLE 131 (159)
Q Consensus 75 -----------------------~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~ 131 (159)
+......+..|.||||+|+..++.+++++|++.|++ ++ .+..|.||||+|+..
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~-~~~~g~t~L~~A~~~ 232 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD---VN-QGKGQDSPLHAVVRT 232 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC---TT-CCBTTBCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC---CC-CCCCCCCHHHHHHHc
Confidence 222334455667777777777777777777777766 45 366777777777777
Q ss_pred CCcceeeeccCCCccCcccccCCCCCCC
Q 035643 132 KQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 132 ~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
++.+++++|+++ +.+++..+..|+||+
T Consensus 233 ~~~~~v~~Ll~~-gad~~~~d~~g~t~l 259 (285)
T 3d9h_A 233 ASEELACLLMDF-GADTQAKNAEGKRPV 259 (285)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCGG
T ss_pred CCHHHHHHHHHC-CCCCCCcCCCCCCHH
Confidence 777777777776 556777777777764
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=9.6e-31 Score=167.68 Aligned_cols=141 Identities=22% Similarity=0.211 Sum_probs=129.2
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..+..|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+..++.+++++|++.+......
T Consensus 56 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 135 (201)
T 3hra_A 56 KALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF 135 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC
Confidence 36789999999999999999999999999999999995544333688999999999999999999999999977677777
Q ss_pred hccCCCCchhhhhhcCC-----hhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 81 LMERGVTILHACVNYNQ-----LESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
.+..|.||||+|+..+. .+++++|++.|++ ++.+|..|.||+|+|+..|+.+++++|+++|
T Consensus 136 ~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 136 QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD---QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC---CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 88899999999999988 8999999999999 8999999999999999999999999999874
No 31
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=9e-31 Score=180.11 Aligned_cols=152 Identities=22% Similarity=0.212 Sum_probs=115.8
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh----
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA---- 77 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~---- 77 (159)
+|++.|++++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++.+...
T Consensus 76 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 76 LLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 567778888888888888888888888888888888887776 467777888888888888888888887743211
Q ss_pred --------------------------------------------------------------------------------
Q 035643 78 -------------------------------------------------------------------------------- 77 (159)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (159)
T Consensus 155 ~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll 234 (351)
T 3utm_A 155 CHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL 234 (351)
T ss_dssp TTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHH
T ss_pred CCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHH
Confidence
Q ss_pred -----hhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCccccc
Q 035643 78 -----ALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFY 152 (159)
Q Consensus 78 -----~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~ 152 (159)
...++..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+
T Consensus 235 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~~ 310 (351)
T 3utm_A 235 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK---MNALDSLGQTALHRAALAGHLQTCRLLLSY-GSDPSIIS 310 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcC
Confidence 112345677888888888888888888888777 777788888888888888888888888887 55777777
Q ss_pred CCCCCC
Q 035643 153 GCGLSG 158 (159)
Q Consensus 153 ~~g~~~ 158 (159)
..|+||
T Consensus 311 ~~g~ta 316 (351)
T 3utm_A 311 LQGFTA 316 (351)
T ss_dssp TTSCCH
T ss_pred CCCCCh
Confidence 777775
No 32
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=2.4e-31 Score=169.54 Aligned_cols=138 Identities=22% Similarity=0.207 Sum_probs=128.1
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......
T Consensus 53 ~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 130 (192)
T 2rfm_A 53 KLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEH-GANVNDR 130 (192)
T ss_dssp HHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCC
T ss_pred HHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCC
Confidence 567789999999999999999999999999999999999987 68899999999999999999999999995 4555667
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..|+.+++++|++.+
T Consensus 131 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 131 NLEGETPLIVASKYGRSEIVKKLLELGAD---ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 88899999999999999999999999999 8999999999999999999999999998764
No 33
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=6.5e-31 Score=164.10 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=108.5
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
.|++.|.+++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++.+ ......
T Consensus 21 ~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 98 (167)
T 3v31_A 21 TRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDCG-VDVNEY 98 (167)
T ss_dssp HHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC
T ss_pred HHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcC
Confidence 356667788888888888888888888888888888887776 567777888888888888888888888744 344455
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..|+.+++++|++++
T Consensus 99 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 99 DWNGGTPLLYAVHGNHVKCVKMLLESGAD---PTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 67788888888888888888888888877 7777888888888888888888888877663
No 34
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.1e-30 Score=159.75 Aligned_cols=133 Identities=25% Similarity=0.253 Sum_probs=101.1
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|.+++ .+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......
T Consensus 20 ~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 96 (153)
T 1awc_B 20 ILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKH-GADVNAK 96 (153)
T ss_dssp HHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCC
T ss_pred HHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHc-CCCCCCC
Confidence 4556677665 4777888888888888888888888877776 46777788888888888888888888874 3444556
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeec
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMD 140 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~l 140 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..|+.+++++|
T Consensus 97 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 97 DMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 67788888888888888888888888777 777778888888888888887777665
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.3e-30 Score=169.15 Aligned_cols=151 Identities=24% Similarity=0.255 Sum_probs=136.6
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILM 82 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 82 (159)
+...+..++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++.+ ......+
T Consensus 26 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 103 (231)
T 3aji_A 26 ILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKG-AHVNAVN 103 (231)
T ss_dssp HHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCCC
Confidence 33455668889999999999999999999999999999887 688999999999999999999999999954 4555678
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++. +.+++..+..|.||+
T Consensus 104 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L 176 (231)
T 3aji_A 104 QNGCTPLHYAASKNRHEIAVMLLEGGAN---PDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPL 176 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHH
Confidence 8899999999999999999999999999 888999999999999999999999999998 668888888998874
No 36
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=6.8e-31 Score=162.44 Aligned_cols=142 Identities=18% Similarity=0.121 Sum_probs=115.7
Q ss_pred cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCC-c
Q 035643 10 AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVT-I 88 (159)
Q Consensus 10 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t-~ 88 (159)
.+..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+ .++.+++++|++. +......+..|.| |
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRP 81 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHH
Confidence 4566788999999999999999999999999887 678999999999996 8999999999995 4555667888998 9
Q ss_pred hhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.|+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGAR---LDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDA 147 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C-------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcc
Confidence 9999999999999999999999 899999999999999999999999999999 66888888888775
No 37
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=176.17 Aligned_cols=146 Identities=19% Similarity=0.253 Sum_probs=132.7
Q ss_pred cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHH-----HhCCHHHHHHHHhcCchhhhhhccC
Q 035643 10 AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAA-----IRGNVNVLKELVKVRPQAALILMER 84 (159)
Q Consensus 10 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~-----~~~~~~~~~~l~~~~~~~~~~~~~~ 84 (159)
+|..|.+|.||||+|+..|+.+++++|++.+....+..+..|.||+|+|+ ..++.+++++|++.+ ......+..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQA 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCC
Confidence 88999999999999999999999999999998334789999999999999 667889999999955 445556778
Q ss_pred CCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 85 GVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 85 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++..+.+++..+..|+||+
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad---~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEAD---VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 99999999999999999999999999 8999999999999999999999999999966889999999999874
No 38
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=2.2e-30 Score=161.70 Aligned_cols=138 Identities=22% Similarity=0.252 Sum_probs=127.2
Q ss_pred CCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhc
Q 035643 16 RKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNY 95 (159)
Q Consensus 16 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 95 (159)
.|.||||.|+..|+.++++.|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHc
Confidence 5889999999999999999999999876 68899999999999999999999999995 455566788899999999999
Q ss_pred CChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 96 NQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 96 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 80 ~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l 139 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD---VNEYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNSM 139 (167)
T ss_dssp TCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCHHHHHHHHHCCCC---CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 999999999999999 899999999999999999999999999998 678888889998874
No 39
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-30 Score=184.36 Aligned_cols=152 Identities=25% Similarity=0.318 Sum_probs=129.9
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..+..|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..++.+++++|++.+ ......
T Consensus 230 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~ 307 (437)
T 1n11_A 230 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDAT 307 (437)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCC
Confidence 467788888888888888888888888888888888888877 577888888888888888888888888854 444556
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 308 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~l 381 (437)
T 1n11_A 308 TRMGYTPLHVASHYGNIKLVKFLLQHQAD---VNAKTKLGYSPLHQAAQQGHTDIVTLLLKN-GASPNEVSSDGTTPL 381 (437)
T ss_dssp CSSCCCHHHHHHHSSCSHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCSSSCCHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCC---CCCCCCCCCCHHHHHHHCChHHHHHHHHHC-cCCCCCCCCCCCCHH
Confidence 77899999999999999999999999998 888999999999999999999999999998 678888888898864
No 40
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=174.55 Aligned_cols=142 Identities=18% Similarity=0.087 Sum_probs=115.9
Q ss_pred cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCch
Q 035643 10 AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTIL 89 (159)
Q Consensus 10 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 89 (159)
++..|..|+||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++. +......+..|.|||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPL 129 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 5778999999999999999999999999999887 68999999999999999999999999995 445556677788888
Q ss_pred hhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 90 HACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 90 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
|+|+..++.+++++|++.+++ ++. +..|.||||+|+..|+.+++++|++. +.+++..+..|.||
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~---~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~ 193 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGAS---VQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTP 193 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC---SSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCH
T ss_pred HHHHHcCHHHHHHHHHHCCCC---CCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCH
Confidence 888888888888888887777 443 33477777777777777777777776 44666666666665
No 41
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=3e-30 Score=160.81 Aligned_cols=141 Identities=26% Similarity=0.225 Sum_probs=88.2
Q ss_pred cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhh
Q 035643 14 DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACV 93 (159)
Q Consensus 14 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 93 (159)
|.+|.+|||.|+..|+.++++.|++.+.......+..|.||||+|+..++.+++++|++. +......+..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHH
Confidence 445566666666666666666666644433345556666666666666666666666663 3334445556666666666
Q ss_pred hcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 94 NYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 94 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 84 ~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAV---VNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPL 145 (165)
T ss_dssp HTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTG
T ss_pred HcCcHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChh
Confidence 66666666666666666 566666666666666666666666666666 455666666666653
No 42
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=4.7e-30 Score=168.54 Aligned_cols=150 Identities=23% Similarity=0.281 Sum_probs=136.3
Q ss_pred cCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCch---hhhhh
Q 035643 5 RKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQ---AALIL 81 (159)
Q Consensus 5 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~---~~~~~ 81 (159)
+.|.+++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||+|+|+..++.+++++|++.+.. .....
T Consensus 34 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~ 112 (241)
T 1k1a_A 34 QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR 112 (241)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCC
T ss_pred hcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccc
Confidence 489999999999999999999999999999999999988 57899999999999999999999999996542 45566
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCcccccccc-CCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKD-DNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..++.+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|++. +.+++..+..|.||+
T Consensus 113 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 113 NYDGLTALHVAVNTECQETVQLLLERGAD---IDAVDIKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSAL 187 (241)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHH
T ss_pred CcCCCcHHHHHHHcCCHHHHHHHHHcCCC---cccccccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 77899999999999999999999999999 78788 7899999999999999999999999 678888888998863
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.9e-31 Score=176.93 Aligned_cols=152 Identities=20% Similarity=0.215 Sum_probs=131.3
Q ss_pred cccCCCcccc----ccCCCCCHHHHHHHh---CChHHHHHHhhcCCccce----------ecCCCCCcHHHHHHHhCCHH
Q 035643 3 LRRKPEQAGE----LDSRKASPLHLAAAK---GYLDIVLKLVSVNPEMCF----------ARDIDGKNPLHIAAIRGNVN 65 (159)
Q Consensus 3 l~~~~~~~~~----~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~----------~~~~~~~~~l~~a~~~~~~~ 65 (159)
|++.|++++. .|..|.||||+|+.. |+.+++++|++.+++... .++..|.||||+|+..|+.+
T Consensus 25 l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~ 104 (256)
T 2etb_A 25 LRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQ 104 (256)
T ss_dssp HHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred HHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHH
Confidence 4568999998 899999999999999 999999999998776521 23467999999999999999
Q ss_pred HHHHHHhcCchhhhhhccC-------------CCCchhhhhhcCChhHHHHHHh---hcCCccccccccCCCCCHHHHHH
Q 035643 66 VLKELVKVRPQAALILMER-------------GVTILHACVNYNQLESLRLLVE---IRNDHEFVNSKDDNGSTILHLAV 129 (159)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~tpl~~a~ 129 (159)
++++|++.+. .....+.. |.||||+|+..++.+++++|++ .|++ ++.+|..|+||||+|+
T Consensus 105 ~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~---~n~~d~~g~TpLh~A~ 180 (256)
T 2etb_A 105 CVKLLVENGA-DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS---LEATDSLGNTVLHALV 180 (256)
T ss_dssp HHHHHHHTTC-CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC---TTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCC-CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC---cCccCCCCCCHHHHHH
Confidence 9999999654 44444544 9999999999999999999999 8999 8999999999999999
Q ss_pred H--hCCcc-------eeeeccCCCccCc-------ccccCCCCCCC
Q 035643 130 L--EKQVE-------VFYMDFDRNNMDN-------NIFYGCGLSGY 159 (159)
Q Consensus 130 ~--~~~~~-------~~~~ll~~~~~~~-------~~~~~~g~~~~ 159 (159)
. .+..+ ++++|++. +.++ +..+..|+||+
T Consensus 181 ~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL 225 (256)
T 2etb_A 181 MIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPL 225 (256)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHH
T ss_pred HcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHH
Confidence 9 67777 99999999 4556 78888999874
No 44
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=5.3e-30 Score=171.68 Aligned_cols=154 Identities=22% Similarity=0.188 Sum_probs=105.6
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceec----------CCCCCcHHHHHHHhCCHHHHHHHH
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFAR----------DIDGKNPLHIAAIRGNVNVLKELV 71 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~----------~~~~~~~l~~a~~~~~~~~~~~l~ 71 (159)
+|+++|++++..+..|.||||+|+..|+.+++++|++.+.++. .. +..|.||||+|+..++.+++++|+
T Consensus 90 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 168 (285)
T 1wdy_A 90 LFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN-LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168 (285)
T ss_dssp HHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc-cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHH
Confidence 3455566666666666666666666666666666666555442 22 455566666666666666666666
Q ss_pred hcCchhhhhhccCCCCchhhhhhcCC----hhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccC
Q 035643 72 KVRPQAALILMERGVTILHACVNYNQ----LESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMD 147 (159)
Q Consensus 72 ~~~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~ 147 (159)
+..+......+..|.||||+|+..++ .+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++..+.+
T Consensus 169 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245 (285)
T ss_dssp HTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC---SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC
T ss_pred HhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC
Confidence 64344445556667777777777777 6777777777777 7778888888888888888888888888866778
Q ss_pred cccccCCCCCCC
Q 035643 148 NNIFYGCGLSGY 159 (159)
Q Consensus 148 ~~~~~~~g~~~~ 159 (159)
++..+..|.||+
T Consensus 246 ~~~~~~~g~t~l 257 (285)
T 1wdy_A 246 INDTDSDGKTAL 257 (285)
T ss_dssp TTCCCTTSCCHH
T ss_pred ccccCCCCCcHH
Confidence 888888888763
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=1.3e-30 Score=181.36 Aligned_cols=151 Identities=17% Similarity=0.226 Sum_probs=109.2
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCc--hhhhh
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRP--QAALI 80 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~--~~~~~ 80 (159)
|++.|++++..|..|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.+. .....
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE 230 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh
Confidence 34789999999999999999999999999999999998887 5788888889999888888888888876321 12222
Q ss_pred hcc--------------------------------------------CCCCchhhhhhcCChhHHHHHHhhc-CCccccc
Q 035643 81 LME--------------------------------------------RGVTILHACVNYNQLESLRLLVEIR-NDHEFVN 115 (159)
Q Consensus 81 ~~~--------------------------------------------~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~ 115 (159)
.+. .|.||||+|+..++.+++++|++.+ ++ ++
T Consensus 231 ~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---~n 307 (373)
T 2fo1_E 231 LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN---KD 307 (373)
T ss_dssp CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC---TT
T ss_pred cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC---cc
Confidence 222 4566666666666666666666554 55 56
Q ss_pred cccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 116 SKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 116 ~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||
T Consensus 308 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~ 349 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTA 349 (373)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCH
Confidence 6666667777777777777777766666 45666666666665
No 46
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=4.5e-30 Score=159.98 Aligned_cols=137 Identities=23% Similarity=0.281 Sum_probs=124.1
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILM 82 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 82 (159)
+...+.+++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+
T Consensus 28 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 105 (165)
T 3twr_A 28 CTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKH-GAVVNVAD 105 (165)
T ss_dssp CCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhC-CCCCCCcC
Confidence 34478888999999999999999999999999999999988 68899999999999999999999999994 45556678
Q ss_pred cCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 83 ERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 83 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+. ++.+++++|+++|+
T Consensus 106 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 106 LWKFTPLHEAAAKGKYEICKLLLQHGAD---PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 8899999999999999999999999999 89999999999999877 88999999998864
No 47
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.2e-30 Score=162.72 Aligned_cols=137 Identities=19% Similarity=0.169 Sum_probs=115.2
Q ss_pred ccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhcc
Q 035643 4 RRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILME 83 (159)
Q Consensus 4 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 83 (159)
...+.+++..+..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. +......+.
T Consensus 26 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~ 103 (179)
T 3f6q_A 26 DNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQY-KADINAVNE 103 (179)
T ss_dssp HCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCT
T ss_pred hcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCC
Confidence 3447788888888899999999988999998888888877 57888888899999988888899888884 455556677
Q ss_pred CCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 84 RGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 84 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
.|.||||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..++.+++++|++.+.
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC---SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC---cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 888899999988888899999888888 78888888999999888888888888888854
No 48
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=2.7e-30 Score=156.53 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=116.8
Q ss_pred CCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCC
Q 035643 7 PEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGV 86 (159)
Q Consensus 7 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 86 (159)
|+++ .+|.+|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~ 77 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQND 77 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCC
Confidence 6777 78999999999999999999999999999988 68999999999999999999999999994 455566788899
Q ss_pred CchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 87 TILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 87 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
||||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..+..++++++.+.+.
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999 89999999999999999999999988877643
No 49
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.5e-29 Score=159.67 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=125.4
Q ss_pred CCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhh
Q 035643 15 SRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVN 94 (159)
Q Consensus 15 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 94 (159)
.++.++||.|+..|+.++++.|++.+....+..+..|.||||+|+..++.+++++|++. +......+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 46789999999999999999999986655578999999999999999999999999995 45556678889999999999
Q ss_pred cCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 95 YNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 95 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.++.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 82 ~~~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD---INAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPV 142 (179)
T ss_dssp TTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGG
T ss_pred cCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcH
Confidence 9999999999999999 899999999999999999999999999999 678889999999985
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1.8e-29 Score=173.66 Aligned_cols=155 Identities=27% Similarity=0.290 Sum_probs=132.8
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|.+.+.+++..|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ......
T Consensus 43 ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~ 120 (351)
T 3utm_A 43 LLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHG-ACVNAM 120 (351)
T ss_dssp HCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred HHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCC
Confidence 466779999999999999999999999999999999999988 688999999999999999999999999954 455566
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCcc-------------------------------------------------
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHE------------------------------------------------- 112 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~------------------------------------------------- 112 (159)
+..|.||||+|+..++.+++++|++.|+++.
T Consensus 121 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 200 (351)
T 3utm_A 121 DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAL 200 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHh
Confidence 7789999999999999988888888765521
Q ss_pred --------------------------------------ccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCC
Q 035643 113 --------------------------------------FVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGC 154 (159)
Q Consensus 113 --------------------------------------~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 154 (159)
.++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..
T Consensus 201 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~ 279 (351)
T 3utm_A 201 EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSL 279 (351)
T ss_dssp CCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred hcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCC
Confidence 1345677888999999999999999999888 6678888888
Q ss_pred CCCCC
Q 035643 155 GLSGY 159 (159)
Q Consensus 155 g~~~~ 159 (159)
|+||+
T Consensus 280 g~t~L 284 (351)
T 3utm_A 280 GQTAL 284 (351)
T ss_dssp SCCHH
T ss_pred CCCHH
Confidence 88864
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1e-30 Score=174.87 Aligned_cols=142 Identities=20% Similarity=0.216 Sum_probs=117.2
Q ss_pred ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCC--------------CCCcHHHHHHHhCCHHHHHHHHhc--Cch
Q 035643 13 LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDI--------------DGKNPLHIAAIRGNVNVLKELVKV--RPQ 76 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~l~~~--~~~ 76 (159)
.|..|.||||+|+..|+.+++++|++.++++ +.++. .|.||||+|+..++.+++++|++. .+.
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 5678999999999999999999999999988 46665 799999999999999999999993 345
Q ss_pred hhhhhccCCCCchhhhhhcCC---------hhHHHHHHhhcCCccccc-------cccCCCCCHHHHHHHhCCcceeeec
Q 035643 77 AALILMERGVTILHACVNYNQ---------LESLRLLVEIRNDHEFVN-------SKDDNGSTILHLAVLEKQVEVFYMD 140 (159)
Q Consensus 77 ~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~~-------~~~~~~~tpl~~a~~~~~~~~~~~l 140 (159)
....++..|.||||+|+..++ .+++++|++.|++ ++ .+|..|.||||+|+..|+.+++++|
T Consensus 176 d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~L 252 (273)
T 2pnn_A 176 DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK---LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252 (273)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh---cccccccccccCCCCCCHHHHHHHhChHHHHHHH
Confidence 556778899999999999888 7899999999988 65 4899999999999999999999999
Q ss_pred cCCCccCcccccCCCCCC
Q 035643 141 FDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 141 l~~~~~~~~~~~~~g~~~ 158 (159)
+++|..++......+.+|
T Consensus 253 l~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 253 LQREIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHTC------------
T ss_pred HHCCCCCchhhhhhhhhc
Confidence 999887888777666654
No 52
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-29 Score=169.66 Aligned_cols=152 Identities=24% Similarity=0.261 Sum_probs=107.7
Q ss_pred ccccCCCccccc-cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 2 ILRRKPEQAGEL-DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 2 ll~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+|++.|++++.. +..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ .....
T Consensus 23 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~ 100 (285)
T 1wdy_A 23 QLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKG-ADVNE 100 (285)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTC
T ss_pred HHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCc
Confidence 456677777776 666777777777777777777777777766 466777777777777777777777777743 33445
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccc----------cCCCCCHHHHHHHhCCcceeeeccCCCccCccc
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSK----------DDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNI 150 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~----------~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~ 150 (159)
.+..|.||||+|+..++.+++++|++.+++ ++.. +..|.||||+|+..|+.+++++|++..+.+++.
T Consensus 101 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 177 (285)
T 1wdy_A 101 CDFYGFTAFMEAAVYGKVKALKFLYKRGAN---VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 177 (285)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC
T ss_pred cCcccCCHHHHHHHhCCHHHHHHHHHhCCC---cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 566677777777777777777777777766 4444 566777777777777777777777665666666
Q ss_pred ccCCCCCC
Q 035643 151 FYGCGLSG 158 (159)
Q Consensus 151 ~~~~g~~~ 158 (159)
.+..|.||
T Consensus 178 ~~~~g~t~ 185 (285)
T 1wdy_A 178 CDNMGRNA 185 (285)
T ss_dssp CCTTSCCH
T ss_pred cCCCCCCH
Confidence 66666654
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.1e-29 Score=159.27 Aligned_cols=138 Identities=23% Similarity=0.219 Sum_probs=125.6
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcC
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYN 96 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 96 (159)
+.+|||.|+..|+.+.++.+++.+....+.++..|.||||+|+..++.+++++|++.+ ......+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 5689999999999999999999998866788999999999999999999999999955 445566788999999999999
Q ss_pred ChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 97 QLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 97 ~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 81 ~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 81 YTDIVGLLLERDVD---INIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPM 139 (172)
T ss_dssp CHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHH
Confidence 99999999999999 899999999999999999999999999998 678888889998874
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.2e-29 Score=175.95 Aligned_cols=153 Identities=24% Similarity=0.238 Sum_probs=108.0
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcC---chh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVR---PQA 77 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~---~~~ 77 (159)
++|++.|++++..|..|.||||+|+..|+.+++++|++.+++. .+..|.||||+|+..|+.+++++|++.. ...
T Consensus 37 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 113 (364)
T 3ljn_A 37 RRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQM 113 (364)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCC
Confidence 3578899999999999999999999999999999999988844 3345677777777777777777777641 111
Q ss_pred hhh-----------------hccCCCCchhhhhhcC--ChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceee
Q 035643 78 ALI-----------------LMERGVTILHACVNYN--QLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFY 138 (159)
Q Consensus 78 ~~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~ 138 (159)
... .+..|.||||+|+..| +.+++++|++.|++ ++.+|..|.||||+|+..|+.++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~---~~~~d~~g~t~L~~A~~~g~~~~v~ 190 (364)
T 3ljn_A 114 PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS---PTAKDKADETPLMRAMEFRNREALD 190 (364)
T ss_dssp HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCCHHHHH
Confidence 122 4556677777777777 67777777777766 6666666667777777666666666
Q ss_pred eccCCCcc----CcccccCCCCCCC
Q 035643 139 MDFDRNNM----DNNIFYGCGLSGY 159 (159)
Q Consensus 139 ~ll~~~~~----~~~~~~~~g~~~~ 159 (159)
+|++.+.. +++..+..|+||+
T Consensus 191 ~Ll~~g~~~~~~~~~~~~~~g~t~L 215 (364)
T 3ljn_A 191 LMMDTVPSKSSLRLDYANKQGNSHL 215 (364)
T ss_dssp HHHHHCSCSSSCCTTCCCTTCCCTT
T ss_pred HHHhcccccccccccccCCCCCcHH
Confidence 66665322 1555666666654
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.1e-29 Score=155.59 Aligned_cols=131 Identities=21% Similarity=0.255 Sum_probs=116.3
Q ss_pred CCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCC
Q 035643 6 KPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERG 85 (159)
Q Consensus 6 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 85 (159)
.+.+++..+..|.||||+ +..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ......+..|
T Consensus 25 ~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g 101 (156)
T 1bd8_A 25 ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTG 101 (156)
T ss_dssp TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTS
T ss_pred hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCC
Confidence 356899999999999999 8899999999999999887 578899999999999999999999999954 5555667789
Q ss_pred CCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCC
Q 035643 86 VTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDR 143 (159)
Q Consensus 86 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~ 143 (159)
.||||+|+..++.+++++|++. ++ ++.+|..|.||+|+|+..|+.+++++|+++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999988 77 788999999999999999999999998875
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.5e-29 Score=158.29 Aligned_cols=141 Identities=28% Similarity=0.341 Sum_probs=126.8
Q ss_pred ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhh
Q 035643 13 LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHAC 92 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 92 (159)
....+.++|++|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.||||+|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHH
Confidence 3456788999999999999999999999987 57899999999999999999999999995 455556788899999999
Q ss_pred hhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 93 VNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 93 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGAD---VNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAF 150 (169)
T ss_dssp HHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred HHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 999999999999999999 899999999999999999999999999999 667888888898863
No 57
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=7.9e-30 Score=177.50 Aligned_cols=135 Identities=19% Similarity=0.190 Sum_probs=111.7
Q ss_pred CccccccCCCCCHHHHHHHhC---ChHHHHHHhhcCCccce-------ecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh
Q 035643 8 EQAGELDSRKASPLHLAAAKG---YLDIVLKLVSVNPEMCF-------ARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA 77 (159)
Q Consensus 8 ~~~~~~~~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~-------~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 77 (159)
++++..|..|.||||+|+..+ +.+++++|++.+.++.. ..+..|.||||+|+..|+.+++++|++.++..
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 566666666666666666665 66667777766665521 24567889999999999999999999866677
Q ss_pred hhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 78 ALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 78 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
....+..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad---~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS---VEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 777888999999999999999999999999999 89999999999999999999999999999854
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=5.1e-29 Score=162.94 Aligned_cols=139 Identities=24% Similarity=0.264 Sum_probs=124.3
Q ss_pred CCCCHHHHHHHhCChHHHHHHhhc-CCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhh----hhhccCCCCchh
Q 035643 16 RKASPLHLAAAKGYLDIVLKLVSV-NPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAA----LILMERGVTILH 90 (159)
Q Consensus 16 ~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~----~~~~~~~~t~l~ 90 (159)
.|.||||+|+..|+.++++.|++. +.++ +.++..|.||||+|+..|+.+++++|++.+.... ...+..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999997 7776 6889999999999999999999999999765543 345668999999
Q ss_pred hhhhcCChhHHHHHHhhcCCccccccccC-------------CCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCC
Q 035643 91 ACVNYNQLESLRLLVEIRNDHEFVNSKDD-------------NGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLS 157 (159)
Q Consensus 91 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-------------~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~ 157 (159)
+|+..++.+++++|++.|++ ++.++. .|.||||+|+..|+.+++++|+++ +.+++..+..|+|
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t 156 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGAS---VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNT 156 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCC---TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHhCCCC---CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Confidence 99999999999999999988 666654 799999999999999999999998 6788999999998
Q ss_pred CC
Q 035643 158 GY 159 (159)
Q Consensus 158 ~~ 159 (159)
|+
T Consensus 157 ~L 158 (232)
T 2rfa_A 157 VL 158 (232)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 59
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=3.4e-30 Score=173.50 Aligned_cols=135 Identities=16% Similarity=0.213 Sum_probs=64.8
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCC-CcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDG-KNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
|+++|++++.+|..|.||||+|+..|+.+++++|++.++++ +.++..| .||||+|+..++.+++++|++.+.... .
T Consensus 81 Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~ 157 (285)
T 3kea_A 81 LLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--D 157 (285)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC--C
T ss_pred HHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc--c
Confidence 34444445444444555555555555555555554444444 2444444 445555555555555555544332221 0
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCH-HHHHHHhCCcceeeeccCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTI-LHLAVLEKQVEVFYMDFDR 143 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tp-l~~a~~~~~~~~~~~ll~~ 143 (159)
...|.||||+|+..++.+++++|++.|++ ++.+|..|.|| ||+|+..++.+++++|+++
T Consensus 158 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 158 LAILLSCIHITIKNGHVDMMILLLDYMTS---TNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp CSTHHHHHHHHHHTTCHHHHHHHHHHHHH---TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred ccCCccHHHHHHHcChHHHHHHHHHcCCC---CCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 11344555555555555555555555544 44455555554 5555555555555555555
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2e-29 Score=155.29 Aligned_cols=136 Identities=24% Similarity=0.203 Sum_probs=123.9
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcC
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYN 96 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 96 (159)
..++|+.|+..|+.+++++|++.+.+. ..+..|.||||+|+..|+.+++++|++.+ ......+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC--CCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcC
Confidence 357999999999999999999999876 36888999999999999999999999944 455667888999999999999
Q ss_pred ChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 97 QLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 97 ~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 79 ~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 79 HANIVEVLLKHGAD---VNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAF 137 (153)
T ss_dssp CHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred hHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHH
Confidence 99999999999999 899999999999999999999999999999 678888889998874
No 61
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=2e-29 Score=152.56 Aligned_cols=128 Identities=24% Similarity=0.253 Sum_probs=115.4
Q ss_pred cccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhh
Q 035643 12 ELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHA 91 (159)
Q Consensus 12 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~ 91 (159)
.....+.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.||||+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHL 86 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHH
Confidence 34566889999999999999999999999987 68899999999999999999999999995 45556678889999999
Q ss_pred hhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 92 CVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 92 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
|+..++.+++++|++.|++ ++.+|..|.||+|+|+..++.+++++|++.|
T Consensus 87 A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGAD---VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcCCC---CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999 8899999999999999999999999998764
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=8e-30 Score=171.69 Aligned_cols=148 Identities=19% Similarity=0.116 Sum_probs=133.2
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++.. +|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..|+.+++++|++.+ .....
T Consensus 48 ~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 123 (285)
T 3kea_A 48 CTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMF 123 (285)
T ss_dssp HHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGG
T ss_pred HHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCc
Confidence 3578899999988 4999999999999999999999999998 578999999999999999999999999964 55566
Q ss_pred hccCC-CCchhhhhhcCChhHHHHHHhhcCCccccccccC-CCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 81 LMERG-VTILHACVNYNQLESLRLLVEIRNDHEFVNSKDD-NGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 81 ~~~~~-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
.+..| .||||+|+..++.+++++|++.+++ . .+. .|.||||+|+..|+.+++++|+++ +.+++..+..|+||
T Consensus 124 ~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~---~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~ 197 (285)
T 3kea_A 124 YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS---T--FDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIP 197 (285)
T ss_dssp CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---T--CCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCT
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---c--ccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCCh
Confidence 77778 8999999999999999999999887 3 233 899999999999999999999999 77888899999887
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=9.5e-30 Score=158.00 Aligned_cols=139 Identities=23% Similarity=0.294 Sum_probs=126.1
Q ss_pred CCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhh
Q 035643 15 SRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVN 94 (159)
Q Consensus 15 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 94 (159)
....||||.|+..|+.+++++|++.+.++ +.++..|.||||+|+. ++.+++++|++. +......+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence 35678999999999999999999999888 6889999999999999 999999999995 45556678889999999999
Q ss_pred cCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 95 YNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 95 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
.++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++++....+..+..|.||+
T Consensus 80 ~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l 141 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQAD---VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTAC 141 (162)
T ss_dssp HTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred cCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHH
Confidence 9999999999999999 8999999999999999999999999999997776788888998874
No 64
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=7e-29 Score=147.87 Aligned_cols=125 Identities=36% Similarity=0.529 Sum_probs=115.6
Q ss_pred CCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhc
Q 035643 16 RKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNY 95 (159)
Q Consensus 16 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 95 (159)
+|.||||+|+..|+.+++++|++.+.++ +..+..|.||+|+|+..++.+++++|++. +......+..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999887 57899999999999999999999999994 455566778899999999999
Q ss_pred CChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 96 NQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 96 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
++.+++++|++.+++ ++.+|..|.||+++|+..++.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999 88999999999999999999999999998854
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.4e-29 Score=176.66 Aligned_cols=152 Identities=20% Similarity=0.257 Sum_probs=112.8
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|+++|.+++..+.+|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+ ......
T Consensus 197 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~ 274 (437)
T 1n11_A 197 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLG 274 (437)
T ss_dssp HHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCC
T ss_pred HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCCC
Confidence 455566666666666666666666666666666666666655 456666777777777777777777777633 334455
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|+++ +.+++..+..|+||+
T Consensus 275 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L 348 (437)
T 1n11_A 275 NKSGLTPLHLVAQEGHVPVADVLIKHGVM---VDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPL 348 (437)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCcc---CCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHH
Confidence 66788888888888888888888888888 788888899999999999999999999988 667888888888864
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=6.4e-30 Score=169.54 Aligned_cols=128 Identities=28% Similarity=0.308 Sum_probs=115.4
Q ss_pred cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCC-------------CCcHHHHHHHhCCHHHHHHHHhc--Cchhh
Q 035643 14 DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDID-------------GKNPLHIAAIRGNVNVLKELVKV--RPQAA 78 (159)
Q Consensus 14 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~~--~~~~~ 78 (159)
|..|.||||+|+..|+.++++.|++.++++ +.++.. |.||||+|+..|+.+++++|++. .+...
T Consensus 87 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 87 FYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 477999999999999999999999999988 466665 99999999999999999999994 34556
Q ss_pred hhhccCCCCchhhhhh--cCChh-------HHHHHHhhcCCcccc-------ccccCCCCCHHHHHHHhCCcceeeeccC
Q 035643 79 LILMERGVTILHACVN--YNQLE-------SLRLLVEIRNDHEFV-------NSKDDNGSTILHLAVLEKQVEVFYMDFD 142 (159)
Q Consensus 79 ~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~~~-------~~~~~~~~tpl~~a~~~~~~~~~~~ll~ 142 (159)
..++..|.||||+|+. .++.+ ++++|++.|++ + +.+|..|.||||+|+..|+.+++++|++
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 242 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR---LCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC---cccccccccccCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 6778899999999998 77877 99999999998 7 8899999999999999999999999999
Q ss_pred CCc
Q 035643 143 RNN 145 (159)
Q Consensus 143 ~~~ 145 (159)
++.
T Consensus 243 ~g~ 245 (256)
T 2etb_A 243 REF 245 (256)
T ss_dssp HHH
T ss_pred CCC
Confidence 854
No 67
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=4.7e-29 Score=172.90 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=120.2
Q ss_pred ccCCCCCHHHHHHHhC--ChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh----hhhhccCCC
Q 035643 13 LDSRKASPLHLAAAKG--YLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA----ALILMERGV 86 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~----~~~~~~~~~ 86 (159)
.+..|.||||+|+..| +.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+... ....+..|.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 8999999999999999 999999999999988 689999999999999999999999999955441 566788899
Q ss_pred CchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 87 TILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 87 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGID---VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 999999999999999999999999 89999999999999999999999999999853
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1e-29 Score=166.26 Aligned_cols=149 Identities=17% Similarity=0.112 Sum_probs=115.2
Q ss_pred CccccCCCcccccc---CCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh
Q 035643 1 EILRRKPEQAGELD---SRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA 77 (159)
Q Consensus 1 ~ll~~~~~~~~~~~---~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 77 (159)
+.|++.|++++..+ .++.||||+|+..|+.++++.|++.+.++ +.++..|.||||+|+..|+.+++++|++. +..
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~ 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITA-GAN 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 35677788776555 44566789999999999999999988887 57888999999999999999999999985 455
Q ss_pred hhhhccCCCCchhhhhhcCChhHHHHHHhhcCCcccccccc-CCCCCHHHHH--HHhCCcceeeeccCCCccCcccccCC
Q 035643 78 ALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKD-DNGSTILHLA--VLEKQVEVFYMDFDRNNMDNNIFYGC 154 (159)
Q Consensus 78 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~tpl~~a--~~~~~~~~~~~ll~~~~~~~~~~~~~ 154 (159)
....+..|.||||+|+..++.+++++|++.|++ ++.++ ..|.||||+| +..++.+++++|++. +.+++..+..
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~ 155 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAA---IFATTLSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSG 155 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGG
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cccccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCC
Confidence 566777899999999999999999999999988 77776 5899999999 888899999888887 3344444433
Q ss_pred C
Q 035643 155 G 155 (159)
Q Consensus 155 g 155 (159)
|
T Consensus 156 ~ 156 (229)
T 2vge_A 156 A 156 (229)
T ss_dssp E
T ss_pred c
Confidence 3
No 69
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.3e-29 Score=168.16 Aligned_cols=138 Identities=22% Similarity=0.291 Sum_probs=121.6
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..+..|.||+|+|+..++.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.+ ...+.
T Consensus 103 ~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~ 180 (269)
T 4b93_B 103 PLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQHG-ASINA 180 (269)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTT-CCTTC
T ss_pred HHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCc
Confidence 3678999999999999999999999999999999999999988 689999999999999999999999999954 55667
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCC-cceeeeccCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQ-VEVFYMDFDR 143 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~-~~~~~~ll~~ 143 (159)
.+..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..+. .++++++.+.
T Consensus 181 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~ 241 (269)
T 4b93_B 181 SNNKGNTALHEAVIEKHVFVVELLLLHGAS---VQVLNKRQRTAVDCAEQNSKIMELLQVVPSC 241 (269)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCSGGGSCTTCHHHHHTTC----
T ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHhCCcHHHHHHHHHHh
Confidence 788999999999999999999999999999 89999999999999987764 3444444443
No 70
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=160.37 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=100.6
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
.|++.|++++..+..|.||||+|+..|+.+++++|++.+.+.....+..|.||||+|+..++.+++++|++. +......
T Consensus 27 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 105 (240)
T 3eu9_A 27 ELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY-GADPSLI 105 (240)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred HHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc-CCCCccc
Confidence 467788888888888999999999999999999999888877656666688899999998888888888884 3444555
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCC-cceeeeccCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQ-VEVFYMDFDR 143 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~-~~~~~~ll~~ 143 (159)
+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||+|+|+..+. .+++++|++.
T Consensus 106 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~ 165 (240)
T 3eu9_A 106 DGEGCSCIHLAAQFGHTSIVAYLIAKGQD---VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHhCChHHHHHHHHhc
Confidence 67788888888888888888888887766 44444444444444443332 3333444333
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2.8e-29 Score=168.32 Aligned_cols=140 Identities=24% Similarity=0.291 Sum_probs=128.2
Q ss_pred ccccCCC-ccccccCCCCCHHHHHH-----HhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 035643 2 ILRRKPE-QAGELDSRKASPLHLAA-----AKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRP 75 (159)
Q Consensus 2 ll~~~~~-~~~~~~~~g~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~ 75 (159)
+|++.|+ +++..+..|.||||+|+ ..++.++++.|++.+... ...+..|.||||+|+..|+.+++++|++. +
T Consensus 129 ~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-g 206 (276)
T 4hbd_A 129 QLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLAC-E 206 (276)
T ss_dssp HHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHT-T
T ss_pred HHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhC-C
Confidence 5778887 99999999999999999 678999999999999776 57888999999999999999999999995 4
Q ss_pred hhhhhhccCCCCchhhhhhcCChhHHHHHHh-hcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCcc
Q 035643 76 QAALILMERGVTILHACVNYNQLESLRLLVE-IRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNM 146 (159)
Q Consensus 76 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~ 146 (159)
...+..+..|.||||+|+..|+.+++++|++ .|++ ++.+|..|.||||+|+..|+.+++++|+++.+.
T Consensus 207 ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad---~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~i 275 (276)
T 4hbd_A 207 ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD---ISLTDRDGSTALMVALDAGQSEIASMLYSRMNI 275 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC---CcCcCCCCCCHHHHHHHcCCHHHHHHHHhccCC
Confidence 5566778899999999999999999999999 8999 899999999999999999999999999988653
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.7e-29 Score=167.85 Aligned_cols=135 Identities=21% Similarity=0.247 Sum_probs=118.9
Q ss_pred ccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecC--------------CCCCcHHHHHHHhCCHHHHHHHHhc-
Q 035643 9 QAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARD--------------IDGKNPLHIAAIRGNVNVLKELVKV- 73 (159)
Q Consensus 9 ~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~~- 73 (159)
+++..|..|.||||+|+..|+.+++++|++.++++ +..+ ..|.||||+|+..|+.+++++|++.
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 34555668999999999999999999999999988 4666 6899999999999999999999993
Q ss_pred -CchhhhhhccCCCCchhhhhhcCC---------hhHHHHHHhhcCCcccc-------ccccCCCCCHHHHHHHhCCcce
Q 035643 74 -RPQAALILMERGVTILHACVNYNQ---------LESLRLLVEIRNDHEFV-------NSKDDNGSTILHLAVLEKQVEV 136 (159)
Q Consensus 74 -~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~-------~~~~~~~~tpl~~a~~~~~~~~ 136 (159)
.+......+..|.||||+|+..++ .+++++|++.|++ + +.+|..|.||||+|+..|+.++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK---LFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc---cccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 345556778899999999998887 6899999999988 6 6799999999999999999999
Q ss_pred eeeccCCCccC
Q 035643 137 FYMDFDRNNMD 147 (159)
Q Consensus 137 ~~~ll~~~~~~ 147 (159)
+++|++++...
T Consensus 241 v~~Ll~~g~~~ 251 (260)
T 3jxi_A 241 FQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhCCCc
Confidence 99999986543
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=4.5e-29 Score=164.14 Aligned_cols=139 Identities=17% Similarity=0.110 Sum_probs=113.9
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+.|+++|++++.. ..|.||||+|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.+ ...+.
T Consensus 22 ~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 98 (239)
T 1ycs_B 22 SERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFG-VNVNA 98 (239)
T ss_dssp ----------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTC
T ss_pred HHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCc
Confidence 3578999999864 78999999999999999999999999987 688999999999999999999999999954 55566
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCC-CHHHHH--HHhCCcceeeeccCCCc
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGS-TILHLA--VLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-tpl~~a--~~~~~~~~~~~ll~~~~ 145 (159)
.+..|.||||+|+..++.+++++|++.|++ ++.++..+. ||+|+| +..|+.+++++|++.+.
T Consensus 99 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 99 ADSDGWTPLHCAASCNNVQVCKFLVESGAA---VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh
Confidence 788999999999999999999999999999 888888877 999999 77899999999998743
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=2e-29 Score=167.42 Aligned_cols=151 Identities=20% Similarity=0.181 Sum_probs=127.6
Q ss_pred ccCCCcccccc----CCCCCHHHHHH---HhCChHHHHHHhhcCCcc----------ceecCCCCCcHHHHHHHhCCHHH
Q 035643 4 RRKPEQAGELD----SRKASPLHLAA---AKGYLDIVLKLVSVNPEM----------CFARDIDGKNPLHIAAIRGNVNV 66 (159)
Q Consensus 4 ~~~~~~~~~~~----~~g~t~l~~a~---~~~~~~~~~~ll~~~~~~----------~~~~~~~~~~~l~~a~~~~~~~~ 66 (159)
++.|++++..+ ..|.||||+|+ ..|+.+++++|++.+.+. ....+..|.||||+|+..|+.++
T Consensus 29 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~ 108 (260)
T 3jxi_A 29 LTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHY 108 (260)
T ss_dssp HHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHH
T ss_pred HhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHH
Confidence 35788888776 67999999999 779999999999876432 13445589999999999999999
Q ss_pred HHHHHhcCchhhhhhc--------------cCCCCchhhhhhcCChhHHHHHHh---hcCCccccccccCCCCCHHHHHH
Q 035643 67 LKELVKVRPQAALILM--------------ERGVTILHACVNYNQLESLRLLVE---IRNDHEFVNSKDDNGSTILHLAV 129 (159)
Q Consensus 67 ~~~l~~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~tpl~~a~ 129 (159)
+++|++.+. .....+ ..|.||||+|+..++.+++++|++ .|++ ++.+|..|.||||+|+
T Consensus 109 v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~---~~~~d~~g~TpLh~A~ 184 (260)
T 3jxi_A 109 VELLVEKGA-DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD---LRRQDSRGNTVLHALV 184 (260)
T ss_dssp HHHHHHTTC-CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC---TTCCCTTSCCHHHHHH
T ss_pred HHHHHhCCC-CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC---CcccCCCCCcHHHHHH
Confidence 999999554 444444 579999999999999999999999 8888 8999999999999999
Q ss_pred HhCC---------cceeeeccCCCccCc-------ccccCCCCCCC
Q 035643 130 LEKQ---------VEVFYMDFDRNNMDN-------NIFYGCGLSGY 159 (159)
Q Consensus 130 ~~~~---------~~~~~~ll~~~~~~~-------~~~~~~g~~~~ 159 (159)
..+. .+++++|+++| .++ +..+..|+||+
T Consensus 185 ~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 185 AIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp HHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHH
T ss_pred HhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHH
Confidence 9887 68999999984 455 67888998874
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.4e-28 Score=151.85 Aligned_cols=136 Identities=26% Similarity=0.264 Sum_probs=122.2
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcC
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYN 96 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 96 (159)
+.||||+|+..|+.++++.|++......+..+..|.||||+ +..++.+++++|++. +......+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcC
Confidence 56899999999999999999988322336789999999999 999999999999995 4555667888999999999999
Q ss_pred ChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 97 QLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 97 ~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++. .+++..+..|.||+
T Consensus 80 ~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l 137 (156)
T 1bd8_A 80 FLDTLKVLVEHGAD---VNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPL 137 (156)
T ss_dssp CHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHH
T ss_pred cHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHH
Confidence 99999999999999 899999999999999999999999999998 78888888998874
No 76
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=8e-29 Score=165.69 Aligned_cols=149 Identities=21% Similarity=0.198 Sum_probs=125.2
Q ss_pred CCCccc----cccCCCCCHHHHHHHh---CChHHHHHHhhcCCccc----------eecCCCCCcHHHHHHHhCCHHHHH
Q 035643 6 KPEQAG----ELDSRKASPLHLAAAK---GYLDIVLKLVSVNPEMC----------FARDIDGKNPLHIAAIRGNVNVLK 68 (159)
Q Consensus 6 ~~~~~~----~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~----------~~~~~~~~~~l~~a~~~~~~~~~~ 68 (159)
.+.+++ ..|..|.||||+|+.. |+.+++++|++.+++.. ...+..|.||||+|+..|+.++++
T Consensus 39 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 118 (273)
T 2pnn_A 39 SKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVT 118 (273)
T ss_dssp SCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred cccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHH
Confidence 566665 4588999999999987 99999999999865421 125678999999999999999999
Q ss_pred HHHhcCchhhhhhcc--------------CCCCchhhhhhcCChhHHHHHHh---hcCCccccccccCCCCCHHHHHHHh
Q 035643 69 ELVKVRPQAALILME--------------RGVTILHACVNYNQLESLRLLVE---IRNDHEFVNSKDDNGSTILHLAVLE 131 (159)
Q Consensus 69 ~l~~~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~tpl~~a~~~ 131 (159)
+|++.+ ......+. .|.||||+|+..++.+++++|++ .|++ ++.+|..|+||||+|+..
T Consensus 119 ~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad---~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 119 LLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD---ISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC---TTCCCTTSCCHHHHHHHH
T ss_pred HHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC---ceeeCCCCCcHHHHHHHc
Confidence 999965 44444454 69999999999999999999999 8899 899999999999999999
Q ss_pred CC---------cceeeeccCCCccCcc-------cccCCCCCCC
Q 035643 132 KQ---------VEVFYMDFDRNNMDNN-------IFYGCGLSGY 159 (159)
Q Consensus 132 ~~---------~~~~~~ll~~~~~~~~-------~~~~~g~~~~ 159 (159)
++ .+++++|++.| .+++ ..+..|+||+
T Consensus 195 ~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL 237 (273)
T 2pnn_A 195 ADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPL 237 (273)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHH
T ss_pred cCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHH
Confidence 88 78999999984 4443 5788888874
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=3.2e-29 Score=163.86 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=104.7
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|++++..|..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++.+.......
T Consensus 39 ~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 39 QAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp HHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 577889999999999999999999999999999999999988 6899999999999999999999999999665554444
Q ss_pred ccCCCCchhhh--hhcCChhHHHHHHhhcCCccccccccCCCCCHHHH
Q 035643 82 MERGVTILHAC--VNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHL 127 (159)
Q Consensus 82 ~~~~~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~ 127 (159)
+..|.||||+| +..++.+++++|++.|++ ++.+|..+.||++.
T Consensus 118 ~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 118 LSDGATAFEKCDPYREGYADCATYLADVEQS---MGLMNSGAVYALWD 162 (229)
T ss_dssp SSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH---TTTSGGGEEEESSC
T ss_pred CCCCCCHHHHHHHHhcChHHHHHHHHHcCCC---cccccCCchHHHHH
Confidence 46899999999 999999999999998776 44444444444443
No 78
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=1.3e-28 Score=160.13 Aligned_cols=138 Identities=16% Similarity=0.130 Sum_probs=115.4
Q ss_pred ccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchh
Q 035643 11 GELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILH 90 (159)
Q Consensus 11 ~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~ 90 (159)
+..+..|.||||+|+..|+.++++.|++.+.++ +.++..|.||||+|+..|+.+++++|++..+......+..|.||||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 445667899999999999999999999999987 5889999999999999999999999999646667778889999999
Q ss_pred hhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccC
Q 035643 91 ACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYG 153 (159)
Q Consensus 91 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 153 (159)
+|+..++.+++++|++.|++ ++.+|..|.||+++|+..+..++++.+++.+. .....+.
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~-~~~~~~~ 204 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGAR---TDLRNIEKKLAFDMATNAACASLLKKKQGTDA-VRTLSNA 204 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCC---SCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHHHcCCHHHHHHHHHcCCC---CccccCCCCCHHHHhcchhHHHHHHHHhccch-hhhccch
Confidence 99999999999999999999 89999999999999999999999999999854 4444433
No 79
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=8.4e-28 Score=165.07 Aligned_cols=155 Identities=23% Similarity=0.238 Sum_probs=83.3
Q ss_pred CccccCCCccccccCC-CCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhh
Q 035643 1 EILRRKPEQAGELDSR-KASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAAL 79 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 79 (159)
|+|+++|+++|.++.. |+||||+|+..|+.+++++|+++++++ +.++..+.++++.++..+...+...++.. .....
T Consensus 42 ~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 119 (337)
T 4g8k_A 42 QQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFILAAIAGSVKLLKLFLSK-GADVN 119 (337)
T ss_dssp HHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTT
T ss_pred HHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-hhhccCCCchhHHHHhcccchhhHHhhhc-cchhh
Confidence 3577888888887754 888888888888888888888887765 34444444444444444444444433331 12222
Q ss_pred hhccCCCCchhhhhhcCChhHHHHHHhhcCCccc-------cccccCCCCCHHHHHHHhCCcceeeeccCCCccCccccc
Q 035643 80 ILMERGVTILHACVNYNQLESLRLLVEIRNDHEF-------VNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFY 152 (159)
Q Consensus 80 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~-------~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~ 152 (159)
..+..|.||+++|+..++.++++++++.|++... ....+..|.||||+|+..|+.+++++|+++.+.+++..+
T Consensus 120 ~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d 199 (337)
T 4g8k_A 120 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 199 (337)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence 3344455555555555555555555555444110 011223345555555555555555555544444444444
Q ss_pred CCCCC
Q 035643 153 GCGLS 157 (159)
Q Consensus 153 ~~g~~ 157 (159)
..|.|
T Consensus 200 ~~g~t 204 (337)
T 4g8k_A 200 NMGRN 204 (337)
T ss_dssp TTSCC
T ss_pred CCCCc
Confidence 44443
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=2.4e-27 Score=155.32 Aligned_cols=145 Identities=17% Similarity=0.186 Sum_probs=131.2
Q ss_pred cccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCch
Q 035643 10 AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTIL 89 (159)
Q Consensus 10 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 89 (159)
++..|..|.+||+.|+..|+.++++.|++.+.++ +..+..|.||||+|+..++.+++++|++.+.......+..|.|||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 4567889999999999999999999999999887 578999999999999999999999999977666656666699999
Q ss_pred hhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 90 HACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 90 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
|+|+..++.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|+++ +.+++..+..|.||+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l 146 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGAD---PSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPL 146 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHH
Confidence 999999999999999999999 888999999999999999999999999998 567778888887763
No 81
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=5e-27 Score=161.25 Aligned_cols=153 Identities=22% Similarity=0.173 Sum_probs=91.0
Q ss_pred cccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccce---------ecCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 035643 3 LRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCF---------ARDIDGKNPLHIAAIRGNVNVLKELVKV 73 (159)
Q Consensus 3 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~---------~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 73 (159)
+...+.+++..|..|.||||+|+..|+.++++.+++.++++.. ..+..|.||||+|+..|+.+++++|++.
T Consensus 111 ~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 111 FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 190 (337)
T ss_dssp HHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc
Confidence 4456777888888888999999998999999888887776521 2344578899999988888888888864
Q ss_pred CchhhhhhccCCCCchhhhhhcCC----hhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcc
Q 035643 74 RPQAALILMERGVTILHACVNYNQ----LESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNN 149 (159)
Q Consensus 74 ~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~ 149 (159)
.+......+..|.++++.++..+. ..++++|++.|++ ++.+|..|.||||+|+..|..+++++|+...+.+++
T Consensus 191 ~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad---~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn 267 (337)
T 4g8k_A 191 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 267 (337)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC---TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT
T ss_pred cCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc
Confidence 333333344444444444333221 1233444444444 444444444444444444444444444444444444
Q ss_pred cccCCCCCC
Q 035643 150 IFYGCGLSG 158 (159)
Q Consensus 150 ~~~~~g~~~ 158 (159)
..+..|+||
T Consensus 268 ~~d~~G~Tp 276 (337)
T 4g8k_A 268 DTDSDGKTA 276 (337)
T ss_dssp CBCTTSCBH
T ss_pred CcCCCCCCH
Confidence 444444443
No 82
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=4.5e-27 Score=158.84 Aligned_cols=141 Identities=24% Similarity=0.266 Sum_probs=124.2
Q ss_pred ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhh
Q 035643 13 LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHAC 92 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 92 (159)
.+..|.||||+|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++. +......+..|.||||+|
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAA 113 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHH
Confidence 3456789999999999999999999999987 67899999999999999999999999994 455566788899999999
Q ss_pred hhcCChhHHHHHHhhcCCccccccc-------------------------------------------------------
Q 035643 93 VNYNQLESLRLLVEIRNDHEFVNSK------------------------------------------------------- 117 (159)
Q Consensus 93 ~~~~~~~~~~~Ll~~~~~~~~~~~~------------------------------------------------------- 117 (159)
+..|+.+++++|++.|++ ++..
T Consensus 114 ~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAH---VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHcCCHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 999999999999998877 3322
Q ss_pred -----cCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 118 -----DDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 118 -----~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..|.||||+|+..|+.+++++|++. +.+++..+..|.||+
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL 236 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPL 236 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHH
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHH
Confidence 34578999999999999999999998 678889999999874
No 83
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=8.2e-28 Score=158.10 Aligned_cols=138 Identities=15% Similarity=0.142 Sum_probs=93.3
Q ss_pred cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhh
Q 035643 14 DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACV 93 (159)
Q Consensus 14 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 93 (159)
+..|.||||.|+..++.+.++.+++++.++. .+..+.||||+|+..|+.+++++|++.+. ..+..+..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHH
Confidence 4679999999999999999999999999873 34778999999999999999999999554 56667889999999999
Q ss_pred hcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCcccccCCCC-CC
Q 035643 94 NYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNIFYGCGL-SG 158 (159)
Q Consensus 94 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~-~~ 158 (159)
..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|. ||
T Consensus 79 ~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~ 140 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN---VNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTA 140 (239)
T ss_dssp HHTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCH
T ss_pred HcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcch
Confidence 99999999999999999 899999999999999999999999999999 567777776665 65
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.7e-27 Score=151.11 Aligned_cols=129 Identities=15% Similarity=0.107 Sum_probs=113.1
Q ss_pred ccccc-CCCCCHHHHHHHhCCh----HHHHHHhhcCCccceecCCCCCcHHHHHHHhCC------HHHHHHHHhcCchhh
Q 035643 10 AGELD-SRKASPLHLAAAKGYL----DIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGN------VNVLKELVKVRPQAA 78 (159)
Q Consensus 10 ~~~~~-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~l~~~~~~~~ 78 (159)
++..+ ..|.||||+|+.+++. +++++|++.|+++ +.++..|+||||+|+..++ .+++++|++ .+...
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~-~Gadi 107 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE-KGADI 107 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHH-TTCCS
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHH-CCCCC
Confidence 45555 7799999999999975 5899999999998 6899999999999999887 578999999 45666
Q ss_pred hhhccCCC-CchhhhhhcCC-----hhHHHHHHh-hcCCccccccccCCCCCHHHHHHHhCCcceeeeccCC
Q 035643 79 LILMERGV-TILHACVNYNQ-----LESLRLLVE-IRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDR 143 (159)
Q Consensus 79 ~~~~~~~~-t~l~~a~~~~~-----~~~~~~Ll~-~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~ 143 (159)
+.++..|. ||||+|+..+. .+++++|++ .|++ ++.+|..|.||||+|+..++.+++++|.+.
T Consensus 108 n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---LLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC---TTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC---CcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 67788899 99999999543 458999999 9999 999999999999999999999999999876
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=3.5e-27 Score=140.28 Aligned_cols=114 Identities=22% Similarity=0.203 Sum_probs=102.1
Q ss_pred cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhh
Q 035643 14 DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACV 93 (159)
Q Consensus 14 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 93 (159)
+..|.||||+|+..|+.++++.|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHH
Confidence 567889999999999999999999999987 68899999999999999999999999995 4556677889999999999
Q ss_pred hcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhC
Q 035643 94 NYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEK 132 (159)
Q Consensus 94 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~ 132 (159)
..++.+++++|++.|++ ++.+|..|.||+|+|...+
T Consensus 82 ~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD---KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCCHH
T ss_pred HcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHhCCHH
Confidence 99999999999999999 8999999999999995443
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=4.7e-27 Score=148.73 Aligned_cols=126 Identities=24% Similarity=0.241 Sum_probs=110.7
Q ss_pred ccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhh
Q 035643 13 LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHAC 92 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 92 (159)
.+..|.||||+|+..|+.++++.|++ +.++ +.++..|.||||+|+..++.+++++|++.+.......+..|.||||+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 35688999999999999999999999 7777 689999999999999999999999999965444433338899999999
Q ss_pred hhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCC
Q 035643 93 VNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDR 143 (159)
Q Consensus 93 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~ 143 (159)
+..++.+++++|++.|++ ++.+|..|.||+|+|+..++.+.+..++..
T Consensus 118 ~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~ 165 (183)
T 3deo_A 118 AGYVRPEVVEALVELGAD---IEVEDERGLTALELAREILKTTPKGNPMQF 165 (183)
T ss_dssp HHTTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHHHHTCCCCSHHHH
T ss_pred HhcCcHHHHHHHHHcCCC---CcCCCCCCCCHHHHHHHhccCcccccHHHH
Confidence 999999999999999999 899999999999999998777766665543
No 87
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=8.7e-27 Score=159.62 Aligned_cols=129 Identities=14% Similarity=0.019 Sum_probs=111.1
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCC---hHHHHHHhhcCCccceecCCCCCcHHHHHHH----hCCHHHHHHHHhc
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGY---LDIVLKLVSVNPEMCFARDIDGKNPLHIAAI----RGNVNVLKELVKV 73 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~l~~~ 73 (159)
++|+++|++++.+|..|.||||+|+..|+ .+.++.|++.+....+.++..|.||||+|+. .++.+++++|++.
T Consensus 148 ~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 148 KHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp HHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 46889999999999999999999999998 7788888877633336899999999999999 8999999999874
Q ss_pred Cch--------------------------------------------hhhhhccCCCCchhhhhhcCChhHHHHHHhhcC
Q 035643 74 RPQ--------------------------------------------AALILMERGVTILHACVNYNQLESLRLLVEIRN 109 (159)
Q Consensus 74 ~~~--------------------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 109 (159)
... ....++..|.||||+|+..++.+++++|++.|+
T Consensus 228 ~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 228 LMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307 (327)
T ss_dssp HHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC
T ss_pred HHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 210 245567789999999999999999999999999
Q ss_pred CccccccccCCCCCHHHHHHHhC
Q 035643 110 DHEFVNSKDDNGSTILHLAVLEK 132 (159)
Q Consensus 110 ~~~~~~~~~~~~~tpl~~a~~~~ 132 (159)
+ ++.+|..|+||||+|+..|
T Consensus 308 d---~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 308 D---PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp C---TTCCCTTSCCGGGGTCC--
T ss_pred C---CcccCCCCCCHHHHHHhcC
Confidence 9 8999999999999998654
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=3.4e-26 Score=150.84 Aligned_cols=124 Identities=25% Similarity=0.260 Sum_probs=107.6
Q ss_pred cCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhh
Q 035643 14 DSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACV 93 (159)
Q Consensus 14 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 93 (159)
+..|.||||+|+..|+.++++.|++ +.++ +.++..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999999 7777 6899999999999999999999999999655444443478999999999
Q ss_pred hcCChhHHHHHHhhcCCccccccccCCCCCHHHHHH----------------HhCCcceeeeccC
Q 035643 94 NYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAV----------------LEKQVEVFYMDFD 142 (159)
Q Consensus 94 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~----------------~~~~~~~~~~ll~ 142 (159)
..++.+++++|++.|++ ++.+|..|.||||+|+ ..|..+++++|++
T Consensus 120 ~~g~~~~v~~Ll~~ga~---~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 120 GYVRPEVVEALVELGAD---IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999 8899999999999998 4455666666654
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=4.6e-26 Score=140.72 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=96.4
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCc-HHHHHHHhCCHHHHHHHHhcCchhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKN-PLHIAAIRGNVNVLKELVKVRPQAAL 79 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~l~~~~~~~~~ 79 (159)
++|+++|++++..|..|.||||+|+ .|+.+++++|++.+.++ +.++..|.| |||+|+..++.+++++|++.+ ....
T Consensus 29 ~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~ 105 (156)
T 1bi7_B 29 RALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLD 105 (156)
T ss_dssp HHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCSS
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC-CCCc
Confidence 3578899999999999999999985 89999999999999988 689999999 999999999999999999954 4555
Q ss_pred hhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHH
Q 035643 80 ILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAV 129 (159)
Q Consensus 80 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~ 129 (159)
.++..|.||||+|+..++.+++++|++.|++ ++.++..|.||.+-+.
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 106 VRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAEGPS 152 (156)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccccCC
Confidence 6788899999999999999999999999999 8999999999987443
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.9e-26 Score=145.42 Aligned_cols=137 Identities=14% Similarity=0.082 Sum_probs=117.2
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCH----HHHHHHHhcCchhhhhhccCCCCchhhh
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNV----NVLKELVKVRPQAALILMERGVTILHAC 92 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~----~~~~~l~~~~~~~~~~~~~~~~t~l~~a 92 (159)
++++|+.|+..|+.+.++.++..+.+. ..+..|+||||+|+..++. +++++|++. +...+.++..|.||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHH
Confidence 578999999999999999999877543 2337799999999999875 589999994 456667788999999999
Q ss_pred hhcCC------hhHHHHHHhhcCCccccccccCCCC-CHHHHHHHhCC-----cceeeeccCCCccCcccccCCCCCCC
Q 035643 93 VNYNQ------LESLRLLVEIRNDHEFVNSKDDNGS-TILHLAVLEKQ-----VEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 93 ~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~~~-tpl~~a~~~~~-----~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
+..+. .+++++|++.|++ ++.+|..|. ||||+|+..+. .+++++|++..+.+++..+..|+||+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad---in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD---ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC---SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC---CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 99886 4689999999999 999999999 99999998543 45889999944889999999999974
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=9.7e-25 Score=146.37 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=115.5
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCccc-----eecCCCCCcHHHHHHHh---CCHHHHHHHHhcCchhhhhhccCCCCc
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMC-----FARDIDGKNPLHIAAIR---GNVNVLKELVKVRPQAALILMERGVTI 88 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~-----~~~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~t~ 88 (159)
..++|+.|+..++.+.++.+++.+.+.. +..+..|.||||+|+.. ++.+++++|++.+ ...+.++..|.||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCH
Confidence 4578999999999999999999988753 33478899999999999 8999999999954 5556678899999
Q ss_pred hhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCccCccc
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNNMDNNI 150 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~ 150 (159)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++++...+.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 267 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKAS---IEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS 267 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHcCCHHHHHHHHHcCCC---CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999 8999999999999999999999999999987654443
No 92
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=4e-24 Score=129.14 Aligned_cols=106 Identities=25% Similarity=0.311 Sum_probs=96.6
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
++|++.|++++..|..|.||||+|+..++.++++.|++.++++ +.++..|.||||+|+..++.+++++|++. +.....
T Consensus 31 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~ 108 (136)
T 2jab_A 31 RILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGHLEIAEVLLKH-GADVNA 108 (136)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTC
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcC
Confidence 3578899999999999999999999999999999999999987 57899999999999999999999999995 455566
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhc
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIR 108 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 108 (159)
.+..|.|||++|+..++.+++++|++.|
T Consensus 109 ~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 109 QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7888999999999999999999999864
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=9.5e-25 Score=147.91 Aligned_cols=125 Identities=20% Similarity=0.173 Sum_probs=112.6
Q ss_pred CCCHHHHHHHhCChHHHHHHhhcCCcccee-----cCCCCCcHHHHHHHh---CCHHHHHHHHhcCchhhhhhccCCCCc
Q 035643 17 KASPLHLAAAKGYLDIVLKLVSVNPEMCFA-----RDIDGKNPLHIAAIR---GNVNVLKELVKVRPQAALILMERGVTI 88 (159)
Q Consensus 17 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~-----~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~t~ 88 (159)
+.++|+.|+..|+.+.++.+++.+.++... .+..|.||||+|+.. ++.+++++|++.+ ...+..+..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCCH
Confidence 456799999999999999999999887422 688999999999997 8999999999964 4556678899999
Q ss_pred hhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|++.+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999999999999999 89999999999999999999999999998854
No 94
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=4.6e-24 Score=125.27 Aligned_cols=110 Identities=29% Similarity=0.294 Sum_probs=94.9
Q ss_pred ccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchh
Q 035643 11 GELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILH 90 (159)
Q Consensus 11 ~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~ 90 (159)
.++|.+|.||||+|+..|+.++++.|++.+.++ +.++..|.||||+|+..++.+++++|++. +......+..|.|||+
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEH 80 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHH
Confidence 357889999999999999999999999999887 67889999999999999999999999985 4455567788999999
Q ss_pred hhhhcCChhHHHHHHhhcCCccccccccCCCCCHH
Q 035643 91 ACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTIL 125 (159)
Q Consensus 91 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl 125 (159)
+|+..++.+++++|++.|++ ++.++..+.+|-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGAD---VNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSS---HHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCC---CCcCCccccccc
Confidence 99999999999999999999 888988888874
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=8.5e-25 Score=132.09 Aligned_cols=107 Identities=17% Similarity=0.126 Sum_probs=98.0
Q ss_pred CccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCC-CCcHHHHHHHhCCHHHHHHHHhcCchhhh
Q 035643 1 EILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDID-GKNPLHIAAIRGNVNVLKELVKVRPQAAL 79 (159)
Q Consensus 1 ~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 79 (159)
++|++.|++++.+|..|.||||+|+. ++.+++++|++.+.++ +.++.. |.||||+|+..++.+++++|++.+ ....
T Consensus 29 ~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~ 105 (136)
T 1d9s_A 29 RQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLD 105 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCC
T ss_pred HHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCC
Confidence 35788999999999999999999999 9999999999999988 578888 999999999999999999999954 5556
Q ss_pred hhccCCCCchhhhhhcCChhHHHHHHhhcCC
Q 035643 80 ILMERGVTILHACVNYNQLESLRLLVEIRND 110 (159)
Q Consensus 80 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 110 (159)
..+..|.|||++|+..++.+++++|++.|++
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 106 VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6788999999999999999999999998875
No 96
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=1.6e-23 Score=118.55 Aligned_cols=93 Identities=33% Similarity=0.498 Sum_probs=73.1
Q ss_pred CCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhc
Q 035643 16 RKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNY 95 (159)
Q Consensus 16 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 95 (159)
+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..++.+++++|++. +.....++..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHc
Confidence 4788888888888888888888888877 57888888888888888888888888884 344556677788888888888
Q ss_pred CChhHHHHHHhhcCC
Q 035643 96 NQLESLRLLVEIRND 110 (159)
Q Consensus 96 ~~~~~~~~Ll~~~~~ 110 (159)
++.+++++|++.|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 888888888887653
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=3.9e-24 Score=153.75 Aligned_cols=123 Identities=20% Similarity=0.178 Sum_probs=112.5
Q ss_pred CCHHHHHHHhCChHHHHHHhhcCCccceec------CCCCCcHHHHHHH---hCCHHHHHHHHhcCchhhhhhccCCCCc
Q 035643 18 ASPLHLAAAKGYLDIVLKLVSVNPEMCFAR------DIDGKNPLHIAAI---RGNVNVLKELVKVRPQAALILMERGVTI 88 (159)
Q Consensus 18 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 88 (159)
.+.||.|+..|+.+.++.|++.++++ +.. +..|.||||+|+. .|+.+++++|++.+ ...+..+..|.||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 36799999999999999999999887 345 7889999999977 89999999999955 5566778899999
Q ss_pred hhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCC---CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999999 89999999999999999999999999999955
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=1.6e-24 Score=150.17 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=113.8
Q ss_pred CCCCCHHHHHHHh-CChHHHHHHhhcCCccceecC--CCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhh
Q 035643 15 SRKASPLHLAAAK-GYLDIVLKLVSVNPEMCFARD--IDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHA 91 (159)
Q Consensus 15 ~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~ 91 (159)
..+.|+||.|+.. ++.++++.|++.+.++ +..+ ..|.||||+|+..++.+++++|++. +...+..+..|.||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHH
Confidence 3456799999999 9999999999999988 4666 8899999999999999999999995 45566778899999999
Q ss_pred hhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCC
Q 035643 92 CVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRN 144 (159)
Q Consensus 92 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~ 144 (159)
|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+..+
T Consensus 275 A~~~g~~~~v~~LL~~Gad---~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGAD---LGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHCcCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999 8999999999999999999999999998764
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.7e-24 Score=146.64 Aligned_cols=121 Identities=22% Similarity=0.173 Sum_probs=102.8
Q ss_pred ccccCCCcccc------ccCCCCCHHHHHHHh---CChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHh
Q 035643 2 ILRRKPEQAGE------LDSRKASPLHLAAAK---GYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVK 72 (159)
Q Consensus 2 ll~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 72 (159)
.|+..|++++. .+..|.||||+|+.. ++.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 169 ~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 247 (301)
T 2b0o_E 169 EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLK 247 (301)
T ss_dssp HHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35688999988 689999999999997 8999999999999988 6899999999999999999999999999
Q ss_pred cCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCC
Q 035643 73 VRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQ 133 (159)
Q Consensus 73 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~ 133 (159)
. +.....++..|.|||++|+..++.+++++|++.+++ .|.||||+|+..|.
T Consensus 248 ~-gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 248 G-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVI 298 (301)
T ss_dssp T-TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC-------
T ss_pred c-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCC
Confidence 4 455667788999999999999999999999997755 47899999998775
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=3.7e-24 Score=129.36 Aligned_cols=109 Identities=23% Similarity=0.288 Sum_probs=100.3
Q ss_pred ecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHH
Q 035643 46 ARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTIL 125 (159)
Q Consensus 46 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl 125 (159)
.++..|.||||+|+..++.+++++|++.+ ......+..|.||||+|+..++.+++++|++.+++ ++.+|..|.|||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL---VNTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc---ccCcCCCCCCHH
Confidence 57889999999999999999999999954 45556788899999999999999999999999999 899999999999
Q ss_pred HHHHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 126 HLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 126 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
|+|+..++.+++++|++. +.+++..+..|.||+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl 113 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPV 113 (137)
T ss_dssp HHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGG
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 999999999999999998 678899999999985
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.6e-23 Score=123.57 Aligned_cols=107 Identities=31% Similarity=0.455 Sum_probs=98.2
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALIL 81 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 81 (159)
+|++.|.+++..+..|.||||+|+..++.+++++|++.+.++ +.++..|.||+|+|+..++.+++++|++. +......
T Consensus 20 ~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~ 97 (126)
T 1n0r_A 20 LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAK 97 (126)
T ss_dssp HHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC
T ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCccc
Confidence 567889999999999999999999999999999999999987 57899999999999999999999999995 4555567
Q ss_pred ccCCCCchhhhhhcCChhHHHHHHhhcCC
Q 035643 82 MERGVTILHACVNYNQLESLRLLVEIRND 110 (159)
Q Consensus 82 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 110 (159)
+..|.||+++|+..++.+++++|++.|++
T Consensus 98 ~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 98 DKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 88899999999999999999999998875
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.1e-23 Score=118.11 Aligned_cols=92 Identities=36% Similarity=0.516 Sum_probs=83.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHH
Q 035643 50 DGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAV 129 (159)
Q Consensus 50 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~ 129 (159)
+|.||||+|+..++.+++++|++. +.....++..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHH
Confidence 478999999999999999999995 455667788999999999999999999999999999 8999999999999999
Q ss_pred HhCCcceeeeccCCCc
Q 035643 130 LEKQVEVFYMDFDRNN 145 (159)
Q Consensus 130 ~~~~~~~~~~ll~~~~ 145 (159)
..|+.+++++|++.|.
T Consensus 77 ~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 9999999999998854
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.5e-23 Score=124.56 Aligned_cols=107 Identities=23% Similarity=0.261 Sum_probs=95.9
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHH
Q 035643 48 DIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHL 127 (159)
Q Consensus 48 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~ 127 (159)
+..|.+|||+|+..++.+++++|++.+ ......+..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD---INAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHHH
Confidence 456789999999999999999999955 45566788899999999999999999999999999 89999999999999
Q ss_pred HHHhCCcceeeeccCCCccCcccccCCCCCCC
Q 035643 128 AVLEKQVEVFYMDFDRNNMDNNIFYGCGLSGY 159 (159)
Q Consensus 128 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~ 159 (159)
|+..++.+++++|+++ +.+++..+..|.||+
T Consensus 80 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 110 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSK-GADKTVKGPDGLTAF 110 (123)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 9999999999999999 678889999999874
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=2e-23 Score=122.55 Aligned_cols=108 Identities=26% Similarity=0.258 Sum_probs=97.6
Q ss_pred ecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHH
Q 035643 46 ARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTIL 125 (159)
Q Consensus 46 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl 125 (159)
.+|..|.||||+|+..++.+++++|++.+ ......+..|.||||+|+..++.+++++|++.|++ ++.+|..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~d~~g~tpl 79 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD---VNARSKDGNTPE 79 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC---TTCCCTTCCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CcccCCCCCCHH
Confidence 57889999999999999999999999954 44556788899999999999999999999999999 899999999999
Q ss_pred HHHHHhCCcceeeeccCCCccCcccccCCCCCC
Q 035643 126 HLAVLEKQVEVFYMDFDRNNMDNNIFYGCGLSG 158 (159)
Q Consensus 126 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~ 158 (159)
|+|+..++.+++++|+++ +.+++..+..|.+|
T Consensus 80 ~~A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLLDAK-GADVNARSWGSSHH 111 (115)
T ss_dssp HHHHTTTCHHHHHHHHTT-SSSHHHHSCCCC--
T ss_pred HHHHHCCCHHHHHHHHHc-CCCCCcCCcccccc
Confidence 999999999999999998 67889888888876
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=3e-23 Score=131.18 Aligned_cols=119 Identities=19% Similarity=0.162 Sum_probs=103.1
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecC-CCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARD-IDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+|++ |++++..|..|.||||+|+..|+.+++++|++.++++. .++ ..|.||||+|+..++.+++++|++.+ .....
T Consensus 62 ~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~ 138 (183)
T 3deo_A 62 QLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-HRDMRGGLTALHMAAGYVRPEVVEALVELG-ADIEV 138 (183)
T ss_dssp HHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCSSSSCCHHHHHHHTTCHHHHHHHHHHT-CCTTC
T ss_pred HHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCCHHHHHHhcCcHHHHHHHHHcC-CCCcC
Confidence 4566 99999999999999999999999999999999999884 565 88999999999999999999999965 55566
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCC
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDR 143 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~ 143 (159)
++..|.||||+|+..++ ...+.+|+++|+..|..+++++|.++
T Consensus 139 ~d~~g~tpl~~A~~~~~--------------------~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 139 EDERGLTALELAREILK--------------------TTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCTTSCCHHHHHHHHHH--------------------TCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHhcc--------------------CcccccHHHHHHHcCHHHHHHHHHHh
Confidence 78899999999986321 13456899999999999999988765
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=2.7e-22 Score=139.03 Aligned_cols=129 Identities=17% Similarity=0.095 Sum_probs=98.1
Q ss_pred ccccCCCcccccc--CCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhh
Q 035643 2 ILRRKPEQAGELD--SRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAAL 79 (159)
Q Consensus 2 ll~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 79 (159)
+|++.|++++..+ ..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..++.+++++|++. +....
T Consensus 218 ~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~LL~~-Gad~~ 295 (368)
T 3jue_A 218 DALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLACLFLKR-GADLG 295 (368)
T ss_dssp HHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTT
T ss_pred HHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHC-cCCCC
Confidence 4778999999999 88999999999999999999999999998 68999999999999999999999999995 45566
Q ss_pred hhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhC
Q 035643 80 ILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEK 132 (159)
Q Consensus 80 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~ 132 (159)
..+..|.||||+|+..++.+++++|+..+.........+..+.|+++++....
T Consensus 296 ~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 296 ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 77889999999999999999999999887554334456677888888777653
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=6.3e-24 Score=147.58 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=101.9
Q ss_pred ccCCCCCHHHHHHHhCChHHHHHHhhcCCccc--eecCCCCCcHHHHHHHhCCHHHHHHHHhcCchh--hhhhccCCCCc
Q 035643 13 LDSRKASPLHLAAAKGYLDIVLKLVSVNPEMC--FARDIDGKNPLHIAAIRGNVNVLKELVKVRPQA--ALILMERGVTI 88 (159)
Q Consensus 13 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~--~~~~~~~~~t~ 88 (159)
.+.++.||||+|+..|+.+++++|++.+.... ...+..+.||||+|+..|+.+++++|++.+... ....+.. .||
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 34556799999999999999999999876321 123445778999999999999999999966421 1122222 799
Q ss_pred hhhhhhcCChhHHHHHHhhcCCcccccc--ccCCCCCHHHHHH-HhCCcceeeeccCCC
Q 035643 89 LHACVNYNQLESLRLLVEIRNDHEFVNS--KDDNGSTILHLAV-LEKQVEVFYMDFDRN 144 (159)
Q Consensus 89 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--~~~~~~tpl~~a~-~~~~~~~~~~ll~~~ 144 (159)
||+|+..|+.+++++|++.|++ ++. .|..|.||||+|+ ..|+.+++++|++.+
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~---~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPT---EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGG---GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHHCCCHHHHHHHHHcCCc---cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 9999999999999999999988 666 7888999999999 999999999999864
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=2.4e-22 Score=144.48 Aligned_cols=117 Identities=23% Similarity=0.217 Sum_probs=98.0
Q ss_pred ccccCCCccccc------cCCCCCHHHHHHH---hCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHh
Q 035643 2 ILRRKPEQAGEL------DSRKASPLHLAAA---KGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVK 72 (159)
Q Consensus 2 ll~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 72 (159)
.|++.|++++.. +..|.||||+|+. .|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 150 ~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 228 (497)
T 3lvq_E 150 EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLK 228 (497)
T ss_dssp HHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHH
T ss_pred HHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 477889999988 8899999999976 89999999999999998 6899999999999999999999999999
Q ss_pred cCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCHHHHHH
Q 035643 73 VRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAV 129 (159)
Q Consensus 73 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~ 129 (159)
. +.....++..|.||||+|+..++.+++++|++.|++ ++. +|+|.+.
T Consensus 229 ~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~~~------~~~h~~~ 275 (497)
T 3lvq_E 229 G-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFA------FPLHVDY 275 (497)
T ss_dssp T-CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred c-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC---CCC------Ccceeec
Confidence 5 455667788999999999999999999999999998 555 4555544
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.3e-22 Score=130.70 Aligned_cols=108 Identities=19% Similarity=0.115 Sum_probs=91.4
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhc-CCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSV-NPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+|++.|++++..|..|.||||+|+..|+.+++++|++. +.++ +.++..|.||||+|+..|+.+++++|++.+ .....
T Consensus 91 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~ 168 (222)
T 3ehr_A 91 ECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGYADIVQLLLAKG-ARTDL 168 (222)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCC
T ss_pred HHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcc
Confidence 57789999999999999999999999999999999998 7777 689999999999999999999999999964 45556
Q ss_pred hccCCCCchhhhhhcCChhHHHHHHhhcCCc
Q 035643 81 LMERGVTILHACVNYNQLESLRLLVEIRNDH 111 (159)
Q Consensus 81 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 111 (159)
++..|.|||++|+..+..++++.|+..++..
T Consensus 169 ~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 169 RNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred ccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 7889999999999999999999999988883
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3e-21 Score=129.46 Aligned_cols=107 Identities=21% Similarity=0.193 Sum_probs=95.6
Q ss_pred cccCCCc------cccccCCCCCHHHHHHHh---CChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhc
Q 035643 3 LRRKPEQ------AGELDSRKASPLHLAAAK---GYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKV 73 (159)
Q Consensus 3 l~~~~~~------~~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 73 (159)
++..|++ ++..+..|.||||+|+.. ++.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 149 ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~- 226 (278)
T 1dcq_A 149 AYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECLKLLLR- 226 (278)
T ss_dssp HHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-
T ss_pred HHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 4566777 445588999999999999 8999999999999998 6899999999999999999999999999
Q ss_pred CchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCc
Q 035643 74 RPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDH 111 (159)
Q Consensus 74 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 111 (159)
.+.....++..|.||||+|+..++.+++++|++.+++.
T Consensus 227 ~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 227 GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45566778889999999999999999999999998763
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=6.2e-24 Score=147.60 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=104.8
Q ss_pred ccccCCCc---cccccCCCCCHHHHHHHhCChHHHHHHhhcCCcc--ceecCCCCCcHHHHHHHhCCHHHHHHHHhcCch
Q 035643 2 ILRRKPEQ---AGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEM--CFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQ 76 (159)
Q Consensus 2 ll~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~ 76 (159)
+|++.|+. .+..+..|.||||+|+.+|+.+++++|++.+++. .+..+.+ .||||+|+..|+.+++++|++.+..
T Consensus 110 ~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~ 188 (376)
T 2aja_A 110 TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT 188 (376)
T ss_dssp HHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG
T ss_pred HHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 46677762 2234556788999999999999999999999741 0122223 8999999999999999999996654
Q ss_pred hhh-hhccCCCCchhhhh-hcCChhHHHHHHhhcCCccccccccCCCCCHHHHHHHhCCcceeeeccCCCc
Q 035643 77 AAL-ILMERGVTILHACV-NYNQLESLRLLVEIRNDHEFVNSKDDNGSTILHLAVLEKQVEVFYMDFDRNN 145 (159)
Q Consensus 77 ~~~-~~~~~~~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~ 145 (159)
... ..+..|.||||+|+ ..|+.+++++|++.|+. +.||+|+|+..|+.+++++|++.+.
T Consensus 189 ~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------~~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 189 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----------LAYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----------HHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----------cchHHHHHHHCCCHHHHHHHHhcCc
Confidence 332 26677899999999 99999999999996532 6799999999999999999998743
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=2.5e-20 Score=108.55 Aligned_cols=94 Identities=24% Similarity=0.315 Sum_probs=54.4
Q ss_pred ccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCc
Q 035643 9 QAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTI 88 (159)
Q Consensus 9 ~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 88 (159)
.+...+.+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..++.+++++|++. +.....++..|.||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEA-GADVXAQDKFGKTA 93 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCcH
Confidence 34455666666666666666666666666666655 45566666666666666666666666663 33344445556666
Q ss_pred hhhhhhcCChhHHHHH
Q 035643 89 LHACVNYNQLESLRLL 104 (159)
Q Consensus 89 l~~a~~~~~~~~~~~L 104 (159)
||+|+..++.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 6666666666665544
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=2.8e-20 Score=122.60 Aligned_cols=106 Identities=22% Similarity=0.205 Sum_probs=91.0
Q ss_pred ccccCCCccccccCCCCCHHHHHHHhCChHHHHHHhhcCCccceecC-CCCCcHHHHHHHhCCHHHHHHHHhcCchhhhh
Q 035643 2 ILRRKPEQAGELDSRKASPLHLAAAKGYLDIVLKLVSVNPEMCFARD-IDGKNPLHIAAIRGNVNVLKELVKVRPQAALI 80 (159)
Q Consensus 2 ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 80 (159)
+|++ |++++.+|..|.||||+|+..|+.+++++|++.++++. .++ ..|.||||+|+..|+.+++++|++. +.....
T Consensus 63 ~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~ 139 (244)
T 3ui2_A 63 QLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-HRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEV 139 (244)
T ss_dssp HTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred HHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC
Confidence 4667 99999999999999999999999999999999999984 565 8899999999999999999999995 455556
Q ss_pred hccCCCCchhhhh----------------hcCChhHHHHHHhhcCC
Q 035643 81 LMERGVTILHACV----------------NYNQLESLRLLVEIRND 110 (159)
Q Consensus 81 ~~~~~~t~l~~a~----------------~~~~~~~~~~Ll~~~~~ 110 (159)
++..|.||||+|+ ..|+.+++++|++.+.+
T Consensus 140 ~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 140 EDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 7778888888887 55778888999876433
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=3.7e-20 Score=107.79 Aligned_cols=92 Identities=22% Similarity=0.206 Sum_probs=81.2
Q ss_pred eecCCCCCcHHHHHHHhCCHHHHHHHHhcCchhhhhhccCCCCchhhhhhcCChhHHHHHHhhcCCccccccccCCCCCH
Q 035643 45 FARDIDGKNPLHIAAIRGNVNVLKELVKVRPQAALILMERGVTILHACVNYNQLESLRLLVEIRNDHEFVNSKDDNGSTI 124 (159)
Q Consensus 45 ~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~tp 124 (159)
...+.+|.++||+|+..++.+++++|++. +.....++..|.||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tp 93 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD---VXAQDKFGKTA 93 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccccCCCcH
Confidence 45677889999999999999999999995 455566788999999999999999999999999999 89999999999
Q ss_pred HHHHHHhCCcceeeec
Q 035643 125 LHLAVLEKQVEVFYMD 140 (159)
Q Consensus 125 l~~a~~~~~~~~~~~l 140 (159)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999998765
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=65.51 E-value=5.7 Score=17.63 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=14.2
Q ss_pred HHHHHHHhCChHHHHHHhh
Q 035643 20 PLHLAAAKGYLDIVLKLVS 38 (159)
Q Consensus 20 ~l~~a~~~~~~~~~~~ll~ 38 (159)
.+..||..|+++.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3567888888888887643
Done!