Query 035644
Match_columns 285
No_of_seqs 181 out of 1340
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:54:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035644.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035644hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 3.1E-67 6.8E-72 489.8 24.3 260 4-269 4-345 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.4E-61 5.1E-66 444.8 21.6 234 31-269 1-314 (315)
3 PRK15381 pathogenicity island 100.0 2.2E-52 4.8E-57 393.5 19.2 210 26-268 138-399 (408)
4 cd01847 Triacylglycerol_lipase 100.0 4.1E-51 8.8E-56 370.9 18.2 210 30-269 1-280 (281)
5 cd01846 fatty_acyltransferase_ 100.0 3.2E-47 7E-52 342.6 20.0 206 32-268 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.6E-36 3.4E-41 276.8 18.1 238 24-282 23-342 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 1.5E-20 3.3E-25 163.1 6.9 106 129-266 120-234 (234)
8 cd01832 SGNH_hydrolase_like_1 98.7 1.2E-07 2.6E-12 80.0 10.5 85 129-268 99-184 (185)
9 cd01836 FeeA_FeeB_like SGNH_hy 98.6 4.2E-07 9.1E-12 77.2 10.1 90 129-269 98-188 (191)
10 cd01839 SGNH_arylesterase_like 98.6 5.4E-07 1.2E-11 77.8 10.4 81 135-269 124-204 (208)
11 cd04501 SGNH_hydrolase_like_4 98.4 2.7E-06 5.9E-11 71.7 10.2 93 129-269 90-182 (183)
12 cd01844 SGNH_hydrolase_like_6 98.3 6.5E-06 1.4E-10 69.3 11.4 22 247-268 154-175 (177)
13 cd01823 SEST_like SEST_like. A 98.2 2.4E-05 5.2E-10 69.7 12.7 110 77-202 31-158 (259)
14 PRK10528 multifunctional acyl- 98.1 1.6E-05 3.4E-10 68.1 8.3 25 245-269 158-182 (191)
15 cd01821 Rhamnogalacturan_acety 98.1 1.9E-05 4.2E-10 67.5 8.8 97 129-269 101-197 (198)
16 cd01830 XynE_like SGNH_hydrola 98.1 5.7E-05 1.2E-09 65.1 11.4 24 245-268 179-202 (204)
17 cd01841 NnaC_like NnaC (CMP-Ne 98.0 2.1E-05 4.5E-10 65.7 8.1 90 129-268 82-172 (174)
18 cd01827 sialate_O-acetylestera 98.0 0.00013 2.9E-09 61.5 12.6 87 171-269 89-186 (188)
19 cd01822 Lysophospholipase_L1_l 98.0 0.00011 2.4E-09 61.1 11.7 25 245-269 151-175 (177)
20 cd01828 sialate_O-acetylestera 98.0 3.1E-05 6.6E-10 64.4 7.9 87 129-269 79-167 (169)
21 cd01824 Phospholipase_B_like P 98.0 0.00014 3E-09 66.6 12.8 25 245-269 258-282 (288)
22 cd01825 SGNH_hydrolase_peri1 S 97.9 1.7E-05 3.8E-10 66.7 5.9 95 171-269 77-184 (189)
23 cd01831 Endoglucanase_E_like E 97.9 0.00029 6.3E-09 58.7 12.2 23 247-269 145-167 (169)
24 cd00229 SGNH_hydrolase SGNH_hy 97.8 7.1E-05 1.5E-09 60.8 7.6 88 129-268 98-186 (187)
25 cd01834 SGNH_hydrolase_like_2 97.7 0.00033 7.1E-09 58.8 9.6 89 135-269 103-191 (191)
26 cd01833 XynB_like SGNH_hydrola 97.6 0.00016 3.5E-09 59.2 7.1 61 167-269 96-156 (157)
27 cd04502 SGNH_hydrolase_like_7 97.4 0.0013 2.9E-08 54.6 9.3 24 245-268 146-169 (171)
28 cd01829 SGNH_hydrolase_peri2 S 97.2 0.0011 2.3E-08 56.5 6.7 96 129-269 102-197 (200)
29 cd01838 Isoamyl_acetate_hydrol 97.1 0.0011 2.4E-08 55.9 5.7 93 134-269 106-198 (199)
30 PF14606 Lipase_GDSL_3: GDSL-l 97.1 0.0014 3E-08 55.7 6.0 62 167-268 114-175 (178)
31 PF13472 Lipase_GDSL_2: GDSL-l 96.7 0.0048 1E-07 50.3 6.2 84 129-262 96-179 (179)
32 cd01820 PAF_acetylesterase_lik 96.5 0.0078 1.7E-07 52.1 6.9 89 129-269 120-209 (214)
33 cd01835 SGNH_hydrolase_like_3 96.5 0.0051 1.1E-07 52.1 5.3 79 138-268 113-191 (193)
34 cd04506 SGNH_hydrolase_YpmR_li 96.3 0.018 3.8E-07 49.2 8.0 97 168-268 99-203 (204)
35 cd01840 SGNH_hydrolase_yrhL_li 96.0 0.0093 2E-07 48.8 4.4 25 245-269 125-149 (150)
36 cd01826 acyloxyacyl_hydrolase_ 94.8 0.19 4.2E-06 46.1 8.9 25 244-268 279-304 (305)
37 KOG3035 Isoamyl acetate-hydrol 93.0 0.065 1.4E-06 46.7 2.3 90 137-268 116-206 (245)
38 cd01838 Isoamyl_acetate_hydrol 89.9 2.8 6.1E-05 34.8 9.1 30 171-200 88-117 (199)
39 KOG3670 Phospholipase [Lipid t 84.3 12 0.00027 35.6 10.5 32 243-277 323-354 (397)
40 COG2755 TesA Lysophospholipase 79.0 1.3 2.8E-05 37.9 2.0 25 245-269 183-207 (216)
41 COG2845 Uncharacterized protei 72.5 6.2 0.00013 36.6 4.6 87 138-268 228-315 (354)
42 PF07172 GRP: Glycine rich pro 56.9 11 0.00025 28.6 2.7 25 1-26 1-25 (95)
43 PLN02757 sirohydrochlorine fer 54.0 34 0.00074 28.2 5.4 59 129-208 65-126 (154)
44 cd01842 SGNH_hydrolase_like_5 52.5 10 0.00022 32.3 2.0 20 249-268 161-180 (183)
45 PF01903 CbiX: CbiX; InterPro 52.1 27 0.00058 26.2 4.2 48 129-198 44-92 (105)
46 PF08885 GSCFA: GSCFA family; 51.7 41 0.00088 30.2 5.9 90 129-265 159-250 (251)
47 PF04914 DltD_C: DltD C-termin 48.0 40 0.00088 27.0 4.8 73 177-268 38-125 (130)
48 cd03416 CbiX_SirB_N Sirohydroc 44.2 49 0.0011 24.6 4.6 49 128-197 50-98 (101)
49 PF02633 Creatininase: Creatin 38.4 79 0.0017 27.7 5.6 52 129-205 93-144 (237)
50 PRK13717 conjugal transfer pro 37.9 66 0.0014 25.8 4.4 26 163-188 70-95 (128)
51 PF08331 DUF1730: Domain of un 36.8 74 0.0016 22.9 4.3 65 133-197 8-77 (78)
52 cd01823 SEST_like SEST_like. A 36.7 76 0.0017 27.7 5.3 113 129-268 138-258 (259)
53 cd00384 ALAD_PBGS Porphobilino 31.1 1.8E+02 0.0038 27.0 6.7 55 128-198 57-111 (314)
54 COG1209 RfbA dTDP-glucose pyro 30.7 2E+02 0.0044 26.3 6.9 79 129-218 39-148 (286)
55 cd04823 ALAD_PBGS_aspartate_ri 30.5 1.2E+02 0.0026 28.2 5.5 56 128-198 60-116 (320)
56 COG4531 ZnuA ABC-type Zn2+ tra 29.8 1.3E+02 0.0027 27.6 5.3 51 162-218 178-232 (318)
57 cd04506 SGNH_hydrolase_YpmR_li 28.7 2.4E+02 0.0052 23.3 6.9 61 129-204 113-175 (204)
58 cd03412 CbiK_N Anaerobic cobal 28.4 1.9E+02 0.0042 22.7 5.8 45 128-196 62-106 (127)
59 PRK09283 delta-aminolevulinic 28.1 2E+02 0.0043 26.8 6.5 55 128-198 65-119 (323)
60 TIGR02744 TrbI_Ftype type-F co 28.0 1.2E+02 0.0027 23.7 4.4 27 162-188 56-82 (112)
61 cd03414 CbiX_SirB_C Sirohydroc 27.9 1.8E+02 0.0039 22.0 5.5 46 128-196 51-96 (117)
62 PRK13384 delta-aminolevulinic 26.7 2.2E+02 0.0048 26.5 6.5 55 128-198 67-121 (322)
63 KOG0907 Thioredoxin [Posttrans 26.3 98 0.0021 23.7 3.6 31 176-207 38-68 (106)
64 PF08282 Hydrolase_3: haloacid 25.3 31 0.00067 29.3 0.7 15 29-43 201-215 (254)
65 PHA03289 envelope glycoprotein 24.8 99 0.0021 28.8 3.8 38 7-46 273-311 (352)
66 PF15240 Pro-rich: Proline-ric 24.7 61 0.0013 27.6 2.3 19 10-28 3-21 (179)
67 PF00490 ALAD: Delta-aminolevu 23.4 2.6E+02 0.0056 26.1 6.3 57 128-198 63-119 (324)
68 PRK03669 mannosyl-3-phosphogly 23.0 45 0.00097 29.7 1.3 17 29-45 205-221 (271)
69 cd04824 eu_ALAD_PBGS_cysteine_ 22.3 1.8E+02 0.0038 27.1 5.0 56 128-198 57-114 (320)
70 PF06812 ImpA-rel_N: ImpA-rela 22.0 31 0.00067 23.6 0.1 8 248-255 53-60 (62)
71 PF08029 HisG_C: HisG, C-termi 21.7 59 0.0013 23.4 1.5 17 128-144 56-72 (75)
72 TIGR01486 HAD-SF-IIB-MPGP mann 21.0 53 0.0011 28.9 1.4 18 30-47 194-211 (256)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=3.1e-67 Score=489.83 Aligned_cols=260 Identities=38% Similarity=0.727 Sum_probs=225.0
Q ss_pred hHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCcccccCCCCCcccccccCCCCCCCCCCCCCCCcccCCCCchHHHH
Q 035644 4 NVFLKFFLFFILAVFYLSFNSSEAQMVPAVFVFGDSLVDVGNNNYLPISIAKADFPHNGIDFPTKKPTGRFSNGKNAADF 83 (285)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~~Pyg~~~p~~~~~GRfSnG~~~~d~ 83 (285)
..|+.|+|+.++.+ ....+....+++|||||||++|+||++++. +..++++||||++||++.|+||||||++|+|+
T Consensus 4 ~~~~~~~~~~~~~~---~~~~~~~~~~~aifvFGDSl~D~GN~~~l~-~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~ 79 (351)
T PLN03156 4 HLFLIFFLLLAQLL---VLVAETCAKVPAIIVFGDSSVDAGNNNQIS-TVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDF 79 (351)
T ss_pred chhhHHHHHHHHHH---HHHhcccCCCCEEEEecCcCccCCCccccc-cccccCCCCCCCCCCCCCCCccccCCChhhhh
Confidence 34566665555544 333344577999999999999999998776 55578899999999986799999999999999
Q ss_pred HHHhhCC-CCCCCccccccCCCcccccccccccccCcccccCch---------hh-------------------------
Q 035644 84 IAEKVGL-PSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSD---------QS------------------------- 128 (285)
Q Consensus 84 la~~lgl-~~~p~y~~~~~~~~~~~~~~G~NfA~~Ga~~~~~~~---------~~------------------------- 128 (285)
||+.||+ +.+|||+. |..+..++.+|+|||+||+++++.+. .|
T Consensus 80 iA~~lGl~p~~ppyl~--~~~~~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~ 157 (351)
T PLN03156 80 ISEAFGLKPAIPAYLD--PSYNISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIIS 157 (351)
T ss_pred HHHHhCCCCCCCCCcC--cccCchhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHh
Confidence 9999999 78899998 65556788999999999998754321 00
Q ss_pred --------------------------------------------HHHHHcCCcEEEEecCCCCCCcCcccccC--Ccchh
Q 035644 129 --------------------------------------------LRLYGYGARKFVCVGLGVIGCIPAQRIKS--QTEEC 162 (285)
Q Consensus 129 --------------------------------------------~~L~~~GAr~~~v~nlpplg~~P~~~~~~--~~~~~ 162 (285)
++||++|||||+|+|+||+||+|..+... +..+|
T Consensus 158 ~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C 237 (351)
T PLN03156 158 EALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSEC 237 (351)
T ss_pred cCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCc
Confidence 88999999999999999999999876432 22479
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCcccccccccCcccCCccccCCCC-ccCC
Q 035644 163 NEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPIS-SVCS 241 (285)
Q Consensus 163 ~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~-~~C~ 241 (285)
.+.+|.+++.||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++||+.|.++....|++.. .+|+
T Consensus 238 ~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~ 317 (351)
T PLN03156 238 VEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCS 317 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999988888778899755 5899
Q ss_pred CCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 242 NRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 242 ~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+|++|+|||++|||+++|+++|+.++++
T Consensus 318 ~p~~yvfWD~~HPTe~a~~~iA~~~~~~ 345 (351)
T PLN03156 318 DADKYVFWDSFHPTEKTNQIIANHVVKT 345 (351)
T ss_pred CccceEEecCCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999886
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.4e-61 Score=444.77 Aligned_cols=234 Identities=53% Similarity=0.966 Sum_probs=205.5
Q ss_pred CEEEEeCCcccccCCCCCcccccccCCCCCCCCCCCCCCCcccCCCCchHHHHHHHhhCCCC-CCCccccccCCCccccc
Q 035644 31 PAVFVFGDSLVDVGNNNYLPISIAKADFPHNGIDFPTKKPTGRFSNGKNAADFIAEKVGLPS-SPPYLAVKSNKNKASFL 109 (285)
Q Consensus 31 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~~Pyg~~~p~~~~~GRfSnG~~~~d~la~~lgl~~-~p~y~~~~~~~~~~~~~ 109 (285)
++|||||||++|+||+.++. +..+++.||||++||++ |+||||||++|+|+||+.+|++. +|+|+. +. ...++.
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~-~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~--~~-~~~~~~ 75 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLP-TLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLS--PN-GSSDFL 75 (315)
T ss_pred CcEEEecCccccCCCccccc-cccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccC--cc-ccchhh
Confidence 47999999999999998765 33346799999999985 99999999999999999999998 677776 32 225678
Q ss_pred ccccccccCcccccCch---------h-----------------------------------------------------
Q 035644 110 TGVSFASGGAGIFNSSD---------Q----------------------------------------------------- 127 (285)
Q Consensus 110 ~G~NfA~~Ga~~~~~~~---------~----------------------------------------------------- 127 (285)
+|+|||+|||++.+.+. .
T Consensus 76 ~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 155 (315)
T cd01837 76 TGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEV 155 (315)
T ss_pred ccceecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccccCCH
Confidence 89999999999764221 0
Q ss_pred --------------hHHHHHcCCcEEEEecCCCCCCcCcccccC--CcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 035644 128 --------------SLRLYGYGARKFVCVGLGVIGCIPAQRIKS--QTEECNEEASHWSVMYNEALKSMLQELKSELNGM 191 (285)
Q Consensus 128 --------------~~~L~~~GAr~~~v~nlpplg~~P~~~~~~--~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 191 (285)
.++|+++|||||+|+|+||+||+|.++... ...+|.+.++++++.||++|+++|++|++++|++
T Consensus 156 ~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~ 235 (315)
T cd01837 156 EAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGA 235 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 088999999999999999999999987653 2247999999999999999999999999999999
Q ss_pred EEEEEEechhHHHHHhCCCCCCCcccccccccCcccCCccccCCC-CccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 192 TYTYFDTYSVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPI-SSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 192 ~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~-~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+|+++|+|.+++++++||++|||+++.++||+.|.++....|... ..+|++|++|+|||++|||+++|++||+.++++
T Consensus 236 ~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 236 KFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred EEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999998876666678753 568999999999999999999999999999886
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=2.2e-52 Score=393.47 Aligned_cols=210 Identities=23% Similarity=0.357 Sum_probs=181.3
Q ss_pred cCCCCCEEEEeCCcccccCCCCCcccccccCCCCCCCCCCCCCCCcccCCCCchHHHHHHHhhCCCCCCCccccccCCCc
Q 035644 26 EAQMVPAVFVFGDSLVDVGNNNYLPISIAKADFPHNGIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNK 105 (285)
Q Consensus 26 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~~Pyg~~~p~~~~~GRfSnG~~~~d~la~~lgl~~~p~y~~~~~~~~~ 105 (285)
+...+++||||||||||+||+.+.. +. ..+||||++| +||||||++|+|||| .|||+.
T Consensus 138 ~~~~~~ai~vFGDSlsDtGnn~y~~-t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA-------~~pyl~------- 195 (408)
T PRK15381 138 SLGDITRLVFFGDSLSDSLGRMFEK-TH--HILPSYGQYF-----GGRFTNGFTWTEFLS-------SPHFLG------- 195 (408)
T ss_pred ccCCCCeEEEeCCccccCCCccccc-cc--cCCCCCCCCC-----CcccCCCchhhheec-------cccccC-------
Confidence 4578999999999999998887654 33 4689999876 799999999999999 356764
Q ss_pred ccccccccccccCcccccC---------c-h--h----------------------------------------hHHHHH
Q 035644 106 ASFLTGVSFASGGAGIFNS---------S-D--Q----------------------------------------SLRLYG 133 (285)
Q Consensus 106 ~~~~~G~NfA~~Ga~~~~~---------~-~--~----------------------------------------~~~L~~ 133 (285)
.+|+|||+|||++... . . . .++||+
T Consensus 196 ---~~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~~~~aL~lV~iG~NDy~~~~~~~v~~vV~~~~~~l~~Ly~ 272 (408)
T PRK15381 196 ---KEMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTPSHQDLAIFLLGANDYMTLHKDNVIMVVEQQIDDIEKIIS 272 (408)
T ss_pred ---CCCceEeecccccccccccccccCccCCHHHHHHHHHhcCCcEEEEEeccchHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1689999999997521 0 0 0 089999
Q ss_pred cCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCC
Q 035644 134 YGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQG 213 (285)
Q Consensus 134 ~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yG 213 (285)
+|||||+|+|+||+||+|..+... ..+.+|.+++.||++|+++|++|++++|+++|+++|+|+++.++++||++||
T Consensus 273 lGARk~vV~nlpPlGC~P~~~~~~----~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yG 348 (408)
T PRK15381 273 GGVNNVLVMGIPDLSLTPYGKHSD----EKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIG 348 (408)
T ss_pred cCCcEEEEeCCCCCCCcchhhccC----chHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcC
Confidence 999999999999999999886432 3578999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 214 FTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 214 f~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
|+++.. ||+.|..+....|.+...+|+ +|+|||.+|||+++|+++|+.+.+
T Consensus 349 F~~~~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~ 399 (408)
T PRK15381 349 YDTENP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFAIMLES 399 (408)
T ss_pred CCcccc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHHHHHHH
Confidence 999886 999887666667888777885 999999999999999999998765
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=4.1e-51 Score=370.92 Aligned_cols=210 Identities=24% Similarity=0.348 Sum_probs=175.4
Q ss_pred CCEEEEeCCcccccCCCCCcccccccCCCCCCCCCCCCCCCcccCCCCchHHHHHHHhhCCCCCCCccccccCCCccccc
Q 035644 30 VPAVFVFGDSLVDVGNNNYLPISIAKADFPHNGIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFL 109 (285)
Q Consensus 30 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~~Pyg~~~p~~~~~GRfSnG~~~~d~la~~lgl~~~p~y~~~~~~~~~~~~~ 109 (285)
|++||||||||+|+||+.++. .++ +|+||||||++++|++++.+|++.. +. + ...+..
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~-------~~~--------~~~gRFsnG~~~~d~~~~~~~~~~~---~~--~--~~~~~~ 58 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG-------VGA--------AGGGRFTVNDGSIWSLGVAEGYGLT---TG--T--ATPTTP 58 (281)
T ss_pred CCceEEecCcccccCCCCccc-------cCC--------CCCcceecCCcchHHHHHHHHcCCC---cC--c--CcccCC
Confidence 579999999999999997643 111 3899999999999999999998764 22 1 234677
Q ss_pred ccccccccCcccccCch------------hh-------------------------------------------------
Q 035644 110 TGVSFASGGAGIFNSSD------------QS------------------------------------------------- 128 (285)
Q Consensus 110 ~G~NfA~~Ga~~~~~~~------------~~------------------------------------------------- 128 (285)
+|+|||+|||++.+... .|
T Consensus 59 ~G~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T cd01847 59 GGTNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGGGFDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAAT 138 (281)
T ss_pred CCceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcCCCCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHH
Confidence 89999999999874321 01
Q ss_pred ---------HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEec
Q 035644 129 ---------LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTY 199 (285)
Q Consensus 129 ---------~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 199 (285)
++|+++|||+|+|+++||+||+|.++.... .|.+.++++++.||++|+++|++|+++ +|+++|+|
T Consensus 139 ~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~~--~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~ 212 (281)
T cd01847 139 AAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTPA--AAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTA 212 (281)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhccc--hhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHH
Confidence 889999999999999999999999876543 588999999999999999999998754 89999999
Q ss_pred hhHHHHHhCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 200 SVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 200 ~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
.+++++++||++|||++++++||+.+.......|. ..+|++|++|+|||++||||++|++||+++++.
T Consensus 213 ~~~~~i~~nP~~yGf~~~~~~CC~~~~~~~~~~~~--~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 213 TLLKEVVANPAAYGFTNTTTPACTSTSAAGSGAAT--LVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred HHHHHHHhChHhcCccCCCccccCCCCcccccccc--ccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999865432222232 357999999999999999999999999998864
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=3.2e-47 Score=342.58 Aligned_cols=206 Identities=32% Similarity=0.510 Sum_probs=171.2
Q ss_pred EEEEeCCcccccCCCCCcccccccCCCCCCCCCCCCCCCcccCCCCchHHHHHHHhhCCCCCCCccccccCCCccccccc
Q 035644 32 AVFVFGDSLVDVGNNNYLPISIAKADFPHNGIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTG 111 (285)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~~Pyg~~~p~~~~~GRfSnG~~~~d~la~~lgl~~~p~y~~~~~~~~~~~~~~G 111 (285)
+||||||||+|+||+.++. .. ..+|.+.. +|+||||||++|+|+||+.+|++. ...|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~-~~---~~~~~~~~----~~~grfsnG~~w~d~la~~lg~~~---------------~~~~ 57 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLT-GG---SNPPPSPP----YFGGRFSNGPVWVEYLAATLGLSG---------------LKQG 57 (270)
T ss_pred CeEEeeCccccCCcchhhc-CC---CCCCCCCC----CCCCccCCchhHHHHHHHHhCCCc---------------cCCc
Confidence 5899999999999987554 11 12333222 378999999999999999999853 1236
Q ss_pred ccccccCcccccCch---------------------------------------------------------------hh
Q 035644 112 VSFASGGAGIFNSSD---------------------------------------------------------------QS 128 (285)
Q Consensus 112 ~NfA~~Ga~~~~~~~---------------------------------------------------------------~~ 128 (285)
+|||++|+++..... ..
T Consensus 58 ~N~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~~l~~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~i 137 (270)
T cd01846 58 YNYAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKLRLPPDTLVAIWIGANDLLNALDLPQNPDTLVTRAVDNLFQAL 137 (270)
T ss_pred ceeEecccccCCcccCCCCCCCCCHHHHHHHHHHhccCCCCCCcEEEEEeccchhhhhccccccccccHHHHHHHHHHHH
Confidence 777777776542200 01
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
++|+++|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|++++|+++|+++|+|.+++++++|
T Consensus 138 ~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~--~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~ 215 (270)
T cd01846 138 QRLYAAGARNFLVLNLPDLGLTPAFQAQGDA--VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDN 215 (270)
T ss_pred HHHHHCCCCEEEEeCCCCCCCCcccccCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhC
Confidence 8899999999999999999999999765432 12689999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
|++|||+++.++||+.+. |.+....|++|++|+|||++|||+++|++||+++++
T Consensus 216 p~~yGf~~~~~~C~~~~~------~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 216 PAAYGFTNVTDPCLDYVY------SYSPREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HHhcCCCcCcchhcCCCc------cccccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 999999999999998532 766677899999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=276.85 Aligned_cols=238 Identities=24% Similarity=0.354 Sum_probs=177.7
Q ss_pred cccCCCCCEEEEeCCcccccCCCCCcccccccCCCC-CCCCCCCCCCCcccCC--CCchHHHHHHHhhCCCCC-CCccc-
Q 035644 24 SSEAQMVPAVFVFGDSLVDVGNNNYLPISIAKADFP-HNGIDFPTKKPTGRFS--NGKNAADFIAEKVGLPSS-PPYLA- 98 (285)
Q Consensus 24 ~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~~-Pyg~~~p~~~~~GRfS--nG~~~~d~la~~lgl~~~-p~y~~- 98 (285)
.....+|++++||||||||+|+....... ...| -||. .|+ .+++ +|.+|++++++.+|.-.+ +.++.
T Consensus 23 ~~~~~~~~~l~vfGDSlSDsg~~~~~a~~---~~~~~~~~~-~~g----p~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~ 94 (370)
T COG3240 23 APSLAPFQRLVVFGDSLSDSGNYYRPAGH---HGDPGSYGT-IPG----PSYQNGNGYTYVTVVPETLGQLGVNHDFTYA 94 (370)
T ss_pred cccccccceEEEeccchhhcccccCcccc---cCCcccccc-ccC----CcccCCCceeeeccchhhhcccccccccccc
Confidence 44568999999999999999998765411 1122 2332 222 2333 578899999998882111 11111
Q ss_pred -cccCCCcccccccccccccCcccccCc--h----------hh-------------------------------------
Q 035644 99 -VKSNKNKASFLTGVSFASGGAGIFNSS--D----------QS------------------------------------- 128 (285)
Q Consensus 99 -~~~~~~~~~~~~G~NfA~~Ga~~~~~~--~----------~~------------------------------------- 128 (285)
..++........|.|||+||+++.... . .|
T Consensus 95 ~~~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~~ggand~ 174 (370)
T COG3240 95 AADPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFLWGGANDY 174 (370)
T ss_pred ccCcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHHHhhcchhh
Confidence 002222223357899999998765332 0 00
Q ss_pred --------------------------HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHH
Q 035644 129 --------------------------LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQ 182 (285)
Q Consensus 129 --------------------------~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~ 182 (285)
++|.++|||+|+|+++|+++.+|....... -.+.+.+++..||..|++.|+
T Consensus 175 ~~~~~~~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~---~~~~a~~~t~~~Na~L~~~L~ 251 (370)
T COG3240 175 LALPMLKAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT---EAIQASQATIAFNASLTSQLE 251 (370)
T ss_pred hcccccchhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc---hHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999876432 333888999999999999999
Q ss_pred HHHhhCCCcEEEEEEechhHHHHHhCCCCCCCcccccccccCcccCCccccCCCCccC-CCCCCceEecCCChHHHHHHH
Q 035644 183 ELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVC-SNRSNHVFWDLYHPTQATARI 261 (285)
Q Consensus 183 ~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C-~~p~~ylfwD~~HPT~~~h~~ 261 (285)
+++ .+|+.+|++.++++++.||++|||+|++..||.....++ .|.+..+.| ..|++|+|||++|||+++|++
T Consensus 252 ~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~l 324 (370)
T COG3240 252 QLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHPTTAVHHL 324 (370)
T ss_pred Hhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCCchHHHHH
Confidence 874 799999999999999999999999999999998654443 677665554 457789999999999999999
Q ss_pred HHHHHHcCCCCCccCCChHHh
Q 035644 262 FVDTIFDGPSQYTFPINLRNL 282 (285)
Q Consensus 262 iA~~~~~~~~~~~~P~~~~~l 282 (285)
||++++.. ++.|+.+..|
T Consensus 325 iAeyila~---l~ap~~~~~l 342 (370)
T COG3240 325 IAEYILAR---LAAPFSLTIL 342 (370)
T ss_pred HHHHHHHH---HhCcchhhHH
Confidence 99999996 6788877665
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.82 E-value=1.5e-20 Score=163.13 Aligned_cols=106 Identities=34% Similarity=0.653 Sum_probs=90.2
Q ss_pred HHHHHcCCc-----EEEEecCCCCCCcCcccccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEEechh
Q 035644 129 LRLYGYGAR-----KFVCVGLGVIGCIPAQRIKSQ-TEECNEEASHWSVMYNEALKSMLQELKSELN-GMTYTYFDTYSV 201 (285)
Q Consensus 129 ~~L~~~GAr-----~~~v~nlpplg~~P~~~~~~~-~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~ 201 (285)
++|.+.|+| +++++++||+++.|....... ...|.+.+++.++.||++|++.+.+++++++ +.++.++|+++.
T Consensus 120 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~ 199 (234)
T PF00657_consen 120 KRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSI 199 (234)
T ss_dssp HHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHH
T ss_pred hHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHH
Confidence 888899999 999999999998888654322 2369999999999999999999999988776 889999999999
Q ss_pred HHHH--HhCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHH
Q 035644 202 MQSI--IQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTI 266 (285)
Q Consensus 202 ~~~i--~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 266 (285)
+.++ ..+|.. +.|+|||++|||+++|+++|+++
T Consensus 200 ~~~~~~~~~~~~--------------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 200 FSDMYGIQNPEN--------------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HHHHHHHHHGGH--------------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred HHHhhhccCccc--------------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 9998 666554 48999999999999999999975
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.71 E-value=1.2e-07 Score=79.98 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=54.5
Q ss_pred HHHHHcCCcEEEEecCCCC-CCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 129 LRLYGYGARKFVCVGLGVI-GCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlppl-g~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
+++...++ +++++++||. +..|. ....+...+.+|+.|++..++ .++.++|++..+.
T Consensus 99 ~~i~~~~~-~vil~~~~~~~~~~~~----------~~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~---- 156 (185)
T cd01832 99 RRLRAAGA-RVVVFTIPDPAVLEPF----------RRRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE---- 156 (185)
T ss_pred HHHHhCCC-EEEEecCCCccccchh----------HHHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc----
Confidence 55555566 5888888887 32221 122344567788777766543 2578889876532
Q ss_pred CCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 208 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 208 nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
+. . ..++.-|++||++++|+++|+.+++
T Consensus 157 --------------~~------------------~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 157 --------------FA------------------D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred --------------cC------------------C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 00 0 1223349999999999999999876
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.58 E-value=4.2e-07 Score=77.17 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=58.9
Q ss_pred HHHHH-cCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 129 LRLYG-YGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 129 ~~L~~-~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
+++.+ ....+|+|.++||++..|.... .....+++..+.+|+.+++..++ ++ .+.++|++..+.
T Consensus 98 ~~i~~~~~~~~iiv~~~p~~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~---- 162 (191)
T cd01836 98 DALRAKFPGARVVVTAVPPLGRFPALPQ-----PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF---- 162 (191)
T ss_pred HHHHhhCCCCEEEEECCCCcccCCCCcH-----HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc----
Confidence 45544 3556899999999887664311 12334455666777776665543 32 566788776532
Q ss_pred CCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 208 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 208 nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
..++.-|++||++++|+++|+.+.+.
T Consensus 163 ------------------------------------~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ------------------------------------PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ------------------------------------hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 12334589999999999999998764
No 10
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.56 E-value=5.4e-07 Score=77.75 Aligned_cols=81 Identities=19% Similarity=0.062 Sum_probs=52.1
Q ss_pred CCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCC
Q 035644 135 GARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGF 214 (285)
Q Consensus 135 GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf 214 (285)
+..+++++..||+...+.... .+....+...+.||+.+++..++. ++.++|++.++..
T Consensus 124 ~~~~iil~~pp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~---------- 181 (208)
T cd01839 124 PAPKILIVAPPPIRTPKGSLA-----GKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST---------- 181 (208)
T ss_pred CCCCEEEEeCCccCccccchh-----hhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc----------
Confidence 456788888888722211100 133344566777887777665542 4667886543210
Q ss_pred cccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 215 TEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 215 ~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
...|++|||+++|++||+.++..
T Consensus 182 --------------------------------~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 --------------------------------SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred --------------------------------CCCCccCcCHHHHHHHHHHHHHH
Confidence 13699999999999999998764
No 11
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.39 E-value=2.7e-06 Score=71.68 Aligned_cols=93 Identities=14% Similarity=0.055 Sum_probs=58.4
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
+.+.+.|++ ++++..+|....+... +....+.....||+.+++..++ .++.++|+++.+.+...
T Consensus 90 ~~~~~~~~~-~il~~~~p~~~~~~~~-------~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~- 153 (183)
T cd04501 90 ELAEANGIK-VILASPLPVDDYPWKP-------QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN- 153 (183)
T ss_pred HHHHHCCCc-EEEEeCCCcCccccch-------hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc-
Confidence 666667774 5556666655433211 1123345566788777766543 25888999987664211
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
. .....+..|++||++++|+++|+.+.+.
T Consensus 154 --------------~------------------~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 154 --------------V------------------GLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred --------------c------------------cccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 0 1123445799999999999999998763
No 12
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.34 E-value=6.5e-06 Score=69.28 Aligned_cols=22 Identities=23% Similarity=0.229 Sum_probs=19.8
Q ss_pred eEecCCChHHHHHHHHHHHHHc
Q 035644 247 VFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 247 lfwD~~HPT~~~h~~iA~~~~~ 268 (285)
++.|++|||+++|+++|+.+..
T Consensus 154 ~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 154 ALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred CCCCCCCCCHHHHHHHHHHHhh
Confidence 4679999999999999999875
No 13
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.21 E-value=2.4e-05 Score=69.72 Aligned_cols=110 Identities=9% Similarity=0.078 Sum_probs=62.1
Q ss_pred CchHHHHHHHhhCCCCCCCccccccCCCcccccccccccccCcccccCchh-------hHHHHHcCCcEEEEe-cCCCCC
Q 035644 77 GKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQ-------SLRLYGYGARKFVCV-GLGVIG 148 (285)
Q Consensus 77 G~~~~d~la~~lgl~~~p~y~~~~~~~~~~~~~~G~NfA~~Ga~~~~~~~~-------~~~L~~~GAr~~~v~-nlpplg 148 (285)
+..|++++++.++... . .-.|+|.+|+++.+.... +..-....++-|+|. +.-|+.
T Consensus 31 ~~~y~~~la~~l~~~~---~-------------~~~n~a~sGa~~~~~~~~~~~~~~~~~~~l~~~~dlV~i~iG~ND~~ 94 (259)
T cd01823 31 SNSYPTLLARALGDET---L-------------SFTDVACSGATTTDGIEPQQGGIAPQAGALDPDTDLVTITIGGNDLG 94 (259)
T ss_pred CccHHHHHHHHcCCCC---c-------------eeeeeeecCcccccccccccCCCchhhcccCCCCCEEEEEECccccc
Confidence 4679999999988541 1 126888889887654321 111122334333332 333442
Q ss_pred CcCcccc---cC-------CcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhH
Q 035644 149 CIPAQRI---KS-------QTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVM 202 (285)
Q Consensus 149 ~~P~~~~---~~-------~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 202 (285)
..-.... .. ....+..........|-+.|+++++++++..|+++|+++..+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 95 FADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred hHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc
Confidence 2110000 00 000123333445667888999999999988899999888765554
No 14
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.08 E-value=1.6e-05 Score=68.08 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=21.9
Q ss_pred CceEecCCChHHHHHHHHHHHHHcC
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+++..|++||++++|+.+|+.+.+.
T Consensus 158 ~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 158 QWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 4566799999999999999999875
No 15
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.07 E-value=1.9e-05 Score=67.50 Aligned_cols=97 Identities=12% Similarity=0.017 Sum_probs=57.6
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
+++.+.|++ +++++.||..... . +. ..+.....||+.+++..++. .+.++|++..+.+..+.
T Consensus 101 ~~~~~~~~~-~il~tp~~~~~~~---~------~~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~ 162 (198)
T cd01821 101 AEARAKGAT-PILVTPVTRRTFD---E------GG-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEA 162 (198)
T ss_pred HHHHHCCCe-EEEECCccccccC---C------CC-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHH
Confidence 666677875 5556555422111 0 00 12233456777777666543 47789999998876553
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
-.. .... . .. .++..|++||++++|++||+.+++.
T Consensus 163 ~g~---~~~~------~----------------~~-~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 163 IGP---EKSK------K----------------YF-PEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred hCh---HhHH------h----------------hC-cCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 110 0000 0 00 2445799999999999999998763
No 16
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=5.7e-05 Score=65.07 Aligned_cols=24 Identities=21% Similarity=0.099 Sum_probs=20.6
Q ss_pred CceEecCCChHHHHHHHHHHHHHc
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
+|+.+|++||++++|++||+.+..
T Consensus 179 ~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 179 AYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred ccCCCCCCCCCHHHHHHHHHhcCC
Confidence 566689999999999999998753
No 17
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.04 E-value=2.1e-05 Score=65.70 Aligned_cols=90 Identities=14% Similarity=0.087 Sum_probs=58.1
Q ss_pred HHHHHc-CCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 129 LRLYGY-GARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 129 ~~L~~~-GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
+++.+. ...+++++++||....+. +....++....||+.+++..++. ++.++|+++.+.+-
T Consensus 82 ~~~~~~~p~~~vi~~~~~p~~~~~~---------~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~~-- 143 (174)
T cd01841 82 EQIREEFPNTKIYLLSVLPVLEEDE---------IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVDE-- 143 (174)
T ss_pred HHHHHHCCCCEEEEEeeCCcCcccc---------cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcCC--
Confidence 444433 356789999888653322 11223455778898888765442 37889999876420
Q ss_pred CCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 208 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 208 nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
. + +....+..|++||++++|+++|+.+.+
T Consensus 144 --~--------------~----------------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 144 --F--------------G----------------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred --C--------------C----------------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 0 0 001245679999999999999999864
No 18
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.00 E-value=0.00013 Score=61.46 Aligned_cols=87 Identities=11% Similarity=0.188 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCC----------cccccccccCcccCCccccCCCC-cc
Q 035644 171 VMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGF----------TEVKSACCGLGRLKAKVPCIPIS-SV 239 (285)
Q Consensus 171 ~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf----------~~~~~~Cc~~g~~~~~~~C~~~~-~~ 239 (285)
..|-+.++++++++++..|+.+|++.-....... .+++ ....+..|.. ++ ..+.... ..
T Consensus 89 ~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~------~~~~~~~~~~~~~~~~~~~~~a~~--~~--~~~vD~~~~~ 158 (188)
T cd01827 89 DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYG------DGGFINDNIIKKEIQPMIDKIAKK--LN--LKLIDLHTPL 158 (188)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEeCCccccc------CCCccchHHHHHHHHHHHHHHHHH--cC--CcEEEccccc
Confidence 4566778889998888888888888765432211 1111 0011111110 00 0000111 11
Q ss_pred CCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 240 CSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 240 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+..+ .+.-|++||++++|+++|+.+++.
T Consensus 159 ~~~~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 159 KGKP--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred cCCc--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 2222 356799999999999999999864
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.99 E-value=0.00011 Score=61.09 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=21.4
Q ss_pred CceEecCCChHHHHHHHHHHHHHcC
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+++.-|++||++++|+++|+.+.+.
T Consensus 151 ~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 151 ELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 3456799999999999999998864
No 20
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.97 E-value=3.1e-05 Score=64.42 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=56.2
Q ss_pred HHHHH--cCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHH
Q 035644 129 LRLYG--YGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSII 206 (285)
Q Consensus 129 ~~L~~--~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~ 206 (285)
+.+.+ .++ +|++.++||.+ +. ....+..+..+|+.+++..++ .++.++|+++.+.+
T Consensus 79 ~~~~~~~~~~-~vi~~~~~p~~--~~----------~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~-- 136 (169)
T cd01828 79 EKLRKHFPNI-KIVVQSILPVG--EL----------KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTN-- 136 (169)
T ss_pred HHHHHHCCCC-eEEEEecCCcC--cc----------CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcC--
Confidence 55555 444 68888888865 10 112234567888888776552 25677898865421
Q ss_pred hCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 207 QNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 207 ~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
.. | +..+++..|++||++++|+.+|+.+.+.
T Consensus 137 --~~--~----------------------------~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 137 --AD--G----------------------------DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred --CC--C----------------------------CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 00 0 1134567899999999999999999763
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.97 E-value=0.00014 Score=66.57 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=23.0
Q ss_pred CceEecCCChHHHHHHHHHHHHHcC
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+++-||.+||++++|.++|+.+|..
T Consensus 258 ~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 258 SFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 6788999999999999999999874
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.94 E-value=1.7e-05 Score=66.74 Aligned_cols=95 Identities=14% Similarity=0.143 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC-C-CCCCCccc----ccccccCcc-c-CC-ccccCCCCccCC
Q 035644 171 VMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN-P-TPQGFTEV----KSACCGLGR-L-KA-KVPCIPISSVCS 241 (285)
Q Consensus 171 ~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n-P-~~yGf~~~----~~~Cc~~g~-~-~~-~~~C~~~~~~C~ 241 (285)
+.|=+.++.+++++++..|+++|+++.........-.. + ..-.+... .+.|-..+. + +. ...|. .|.
T Consensus 77 ~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~vd~~~~~~~----~~~ 152 (189)
T cd01825 77 SEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGAGRWRTPPGLDAVIAAQRRVAKEEGIAFWDLYAAMGG----EGG 152 (189)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCCCCcccCCcHHHHHHHHHHHHHHcCCeEEeHHHHhCC----cch
Confidence 35557788888888887899999998875433221000 0 00011111 111211110 0 00 00111 122
Q ss_pred ----CCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 242 ----NRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 242 ----~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
....++..|++||++++|+.+|+.+.+.
T Consensus 153 ~~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 153 IWQWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred hhHhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 1235667899999999999999998864
No 23
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.87 E-value=0.00029 Score=58.74 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=20.5
Q ss_pred eEecCCChHHHHHHHHHHHHHcC
Q 035644 247 VFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 247 lfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
.+.|++||++++|+.||+.+++.
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999998764
No 24
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.83 E-value=7.1e-05 Score=60.76 Aligned_cols=88 Identities=15% Similarity=0.050 Sum_probs=60.9
Q ss_pred HHHHH-cCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 129 LRLYG-YGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 129 ~~L~~-~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
+.+.+ ....+|++++.|+....+. ........+|..+++..++.... ..+.++|++..+...
T Consensus 98 ~~~~~~~~~~~vv~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~-- 160 (187)
T cd00229 98 DALRERAPGAKVILITPPPPPPREG------------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE-- 160 (187)
T ss_pred HHHHHHCCCCcEEEEeCCCCCCCch------------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC--
Confidence 44543 4566889999988777664 12234567777777766554221 347778877655532
Q ss_pred CCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 208 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 208 nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
+..+++||++|||+++|+.+|+.+++
T Consensus 161 -----------------------------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 -----------------------------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred -----------------------------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 24678899999999999999999875
No 25
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.68 E-value=0.00033 Score=58.76 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=60.0
Q ss_pred CCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCC
Q 035644 135 GARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGF 214 (285)
Q Consensus 135 GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf 214 (285)
...+|++++.+|....+... .-....+.....||+.+++..++ .++.++|++..+.+....+
T Consensus 103 ~~~~ii~~~p~~~~~~~~~~------~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~----- 164 (191)
T cd01834 103 SAPRIVLVSPIAYEANEDPL------PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA----- 164 (191)
T ss_pred CCCcEEEECCcccCCCCCCC------CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC-----
Confidence 44577887766644322110 01345566777888888776543 2488899999988644432
Q ss_pred cccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 215 TEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 215 ~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+..++++|++||++++|+.+|+.+.++
T Consensus 165 ----------------------------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ----------------------------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ----------------------------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 135567999999999999999998763
No 26
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.65 E-value=0.00016 Score=59.19 Aligned_cols=61 Identities=16% Similarity=0.333 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCc
Q 035644 167 SHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNH 246 (285)
Q Consensus 167 ~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y 246 (285)
+.....||+.+++.+++.+.. +..+.++|+++.+.+ ++
T Consensus 96 ~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------------~~ 133 (157)
T cd01833 96 NARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------------AD 133 (157)
T ss_pred hHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC----------------------------------------cc
Confidence 456779999999999886543 567899998865531 23
Q ss_pred eEecCCChHHHHHHHHHHHHHcC
Q 035644 247 VFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 247 lfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+.+|++||++++|+.+|+.+++.
T Consensus 134 ~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 134 DLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred cccCCCCCchHHHHHHHHHHHhh
Confidence 46899999999999999999864
No 27
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.37 E-value=0.0013 Score=54.61 Aligned_cols=24 Identities=17% Similarity=0.017 Sum_probs=21.1
Q ss_pred CceEecCCChHHHHHHHHHHHHHc
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
+++..|++||++++|+++|+.+.+
T Consensus 146 ~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 146 ELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHh
Confidence 556689999999999999999865
No 28
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.18 E-value=0.0011 Score=56.46 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=55.9
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
+.+.+.|+ ++++++.||+.- ...++....+|..+++..++ . .+.++|+++.+.+
T Consensus 102 ~~~~~~~~-~vili~~pp~~~--------------~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~---- 155 (200)
T cd01829 102 NVARAKGV-PVIWVGLPAMRS--------------PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD---- 155 (200)
T ss_pred HHHHhCCC-cEEEEcCCCCCC--------------hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC----
Confidence 33344566 477888877641 11233455677766655443 2 3788999876632
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+ +.|+... ...+..+...+...|++|||+++|+++|+.+.+.
T Consensus 156 ~---------~~~~~~~----------~~~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 156 E---------NGRFTYS----------GTDVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred C---------CCCeeee----------ccCCCCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 1 1132110 0001112234556799999999999999999874
No 29
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=97.07 E-value=0.0011 Score=55.90 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=55.7
Q ss_pred cCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCC
Q 035644 134 YGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQG 213 (285)
Q Consensus 134 ~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yG 213 (285)
.|+ ++++++.||.+..................++..+.||+.+++..++. .+.++|+++.+.. ++.
T Consensus 106 ~~~-~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~---~~~--- 171 (199)
T cd01838 106 PKT-KVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQE---EAG--- 171 (199)
T ss_pred CCC-eEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHh---ccC---
Confidence 344 68888888765321110000000122344566778887776655432 4778999877653 110
Q ss_pred CcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 214 FTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 214 f~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
....++.|++||++++|+++|+.+.+.
T Consensus 172 -----------------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 172 -----------------------------WLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred -----------------------------chhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 012345699999999999999998763
No 30
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.05 E-value=0.0014 Score=55.66 Aligned_cols=62 Identities=18% Similarity=0.260 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCc
Q 035644 167 SHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNH 246 (285)
Q Consensus 167 ~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y 246 (285)
....+.+|+.+++.+++++++ .+-++.++|-..++-+ +.-
T Consensus 114 ~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~---------------------------------------d~e 153 (178)
T PF14606_consen 114 GETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD---------------------------------------DHE 153 (178)
T ss_dssp S--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc---------------------------------------ccc
Confidence 345778999999999998764 4567888886554321 011
Q ss_pred eEecCCChHHHHHHHHHHHHHc
Q 035644 247 VFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 247 lfwD~~HPT~~~h~~iA~~~~~ 268 (285)
..-|++|||..+|..+|+.+..
T Consensus 154 ~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 154 ATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ----------------------
T ss_pred cccccccccccccccccccccc
Confidence 2468999999999999998765
No 31
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=96.66 E-value=0.0048 Score=50.25 Aligned_cols=84 Identities=17% Similarity=0.209 Sum_probs=53.1
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
+.+...+ +++++.+||..-.+... +..........+|+.+++..++ + .+.++|+...+.+
T Consensus 96 ~~~~~~~--~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~---- 155 (179)
T PF13472_consen 96 EQLRPHG--PVILVSPPPRGPDPRDP-------KQDYLNRRIDRYNQAIRELAKK----Y---GVPFIDLFDAFDD---- 155 (179)
T ss_dssp HHHHTTS--EEEEEE-SCSSSSTTTT-------HTTCHHHHHHHHHHHHHHHHHH----C---TEEEEEHHHHHBT----
T ss_pred HhhcccC--cEEEecCCCcccccccc-------cchhhhhhHHHHHHHHHHHHHH----c---CCEEEECHHHHcc----
Confidence 5555556 88899888765443221 1334455667778777765533 2 6788998887542
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHH
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIF 262 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~i 262 (285)
+. .....+++.|++|||+++|++|
T Consensus 156 ~~------------------------------~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 156 HD------------------------------GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp TT------------------------------SCBHTCTBTTSSSBBHHHHHHH
T ss_pred cc------------------------------ccchhhcCCCCCCcCHHHhCcC
Confidence 10 0112556699999999999986
No 32
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=96.52 E-value=0.0078 Score=52.12 Aligned_cols=89 Identities=20% Similarity=0.137 Sum_probs=53.9
Q ss_pred HHHHHcC-CcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 129 LRLYGYG-ARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 129 ~~L~~~G-Ar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
+++.+.. -.+|++++++|.+..| ..+.+....+|+.+++... + ..++.++|++..+.+
T Consensus 120 ~~l~~~~P~~~Iil~~~~p~~~~~------------~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~--- 178 (214)
T cd01820 120 EEIREKLPNAKILLLGLLPRGQNP------------NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQ--- 178 (214)
T ss_pred HHHHHHCCCCeEEEEeccCCCCCc------------hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhcc---
Confidence 4444442 2468888888765321 1123345567776655432 1 236888998776541
Q ss_pred CCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHcC
Q 035644 208 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 208 nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+ .| .....++.|++||++++|+++|+.+.+.
T Consensus 179 ~---------------~g----------------~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 179 S---------------DG----------------TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred c---------------CC----------------CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0 00 0012235799999999999999998874
No 33
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.47 E-value=0.0051 Score=52.10 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=49.7
Q ss_pred EEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCccc
Q 035644 138 KFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEV 217 (285)
Q Consensus 138 ~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~ 217 (285)
+|+++++||..... ....+.....+|+.+++..++. .+.++|++..+.+. +.
T Consensus 113 ~vi~~~~~p~~~~~-----------~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~~---~~------- 164 (193)
T cd01835 113 PVLVVGPTPVDEAK-----------MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLNH---PQ------- 164 (193)
T ss_pred cEEEEeCCCccccc-----------cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhcC---cH-------
Confidence 57788877754211 1122445667777777665432 46789998766541 10
Q ss_pred ccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 218 KSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 218 ~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
. ...++..|++||++++|++||+.+.+
T Consensus 165 ----~--------------------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 ----W--------------------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ----H--------------------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 0 01233359999999999999999875
No 34
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=96.34 E-value=0.018 Score=49.17 Aligned_cols=97 Identities=15% Similarity=0.243 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCC-----CCCcccc-cccccCcccCCccccCCCC-ccC
Q 035644 168 HWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTP-----QGFTEVK-SACCGLGRLKAKVPCIPIS-SVC 240 (285)
Q Consensus 168 ~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~-----yGf~~~~-~~Cc~~g~~~~~~~C~~~~-~~C 240 (285)
...+.|=+.|+++++++++..|+++|+++..+.-+.....+... =.+.... +.|-..+ . ....+.. ...
T Consensus 99 ~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~---~-v~~vd~~~~~~ 174 (204)
T cd04506 99 KAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYVYFPNITEINDIVNDWNEASQKLASQYK---N-AYFVPIFDLFS 174 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccccccchHHHHHHHHHHHHHHHHHHHHhCC---C-eEEEehHHhhc
Confidence 34567888999999999998999999888654211110000000 0000000 0111100 0 0000000 001
Q ss_pred CC-CCCceEecCCChHHHHHHHHHHHHHc
Q 035644 241 SN-RSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 241 ~~-p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
.. +...+..|++||++++|+.||+.+++
T Consensus 175 ~~~~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 175 DGQNKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred CCcccccccccCcCCCHHHHHHHHHHHHh
Confidence 11 24566779999999999999999875
No 35
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=96.02 E-value=0.0093 Score=48.78 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=20.9
Q ss_pred CceEecCCChHHHHHHHHHHHHHcC
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
+++..|++||++++|+++|+.+.+.
T Consensus 125 ~~~~~DgiHpn~~G~~~~a~~i~~a 149 (150)
T cd01840 125 DWFYGDGVHPNPAGAKLYAALIAKA 149 (150)
T ss_pred hhhcCCCCCCChhhHHHHHHHHHHh
Confidence 3445699999999999999998763
No 36
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=94.76 E-value=0.19 Score=46.14 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=21.3
Q ss_pred CCceE-ecCCChHHHHHHHHHHHHHc
Q 035644 244 SNHVF-WDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 244 ~~ylf-wD~~HPT~~~h~~iA~~~~~ 268 (285)
-+++- -|++||++.+|.++|+.++.
T Consensus 279 ~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 279 WQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred hhhcccccCCCccHHHHHHHHHHhhc
Confidence 35555 69999999999999999875
No 37
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=93.04 E-value=0.065 Score=46.69 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=61.6
Q ss_pred cEEEEecCCCCCCcCcccccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCc
Q 035644 137 RKFVCVGLGVIGCIPAQRIKSQ-TEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFT 215 (285)
Q Consensus 137 r~~~v~nlpplg~~P~~~~~~~-~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~ 215 (285)
.+|++++-||+...-......+ ...-.++.|+.+..|++.+.+..+++ ++..+|..+.+++.-
T Consensus 116 ~riIlitPpp~de~~~~~~~~e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~--------- 179 (245)
T KOG3035|consen 116 TRIILITPPPVDEEAWEKQEQEPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD--------- 179 (245)
T ss_pred ceEEEecCCCcCHHHHHHHhccchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc---------
Confidence 4688888888775533322211 11234468999999999888877664 566788876665310
Q ss_pred ccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 216 EVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 216 ~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
|..+-.|||++|.|.++++++.++++.
T Consensus 180 --------------------------dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 --------------------------DWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred --------------------------cHHHHHhccceeeccccchhhHHHHHH
Confidence 112345899999999999999999887
No 38
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=89.88 E-value=2.8 Score=34.83 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEech
Q 035644 171 VMYNEALKSMLQELKSELNGMTYTYFDTYS 200 (285)
Q Consensus 171 ~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~ 200 (285)
+.|=+.++++++++++.+|+++++++-...
T Consensus 88 ~~~~~~~~~~i~~~~~~~~~~~ii~~t~~~ 117 (199)
T cd01838 88 DEYKENLRKIVSHLKSLSPKTKVILITPPP 117 (199)
T ss_pred HHHHHHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 456677899999999888999999987544
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=84.26 E-value=12 Score=35.55 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.3
Q ss_pred CCCceEecCCChHHHHHHHHHHHHHcCCCCCccCC
Q 035644 243 RSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPI 277 (285)
Q Consensus 243 p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~~~~P~ 277 (285)
+.+++--|-.|.++.+|.++|+++|.. +..|.
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNn---l~epv 354 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNN---LFEPV 354 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHH---hhcCC
Confidence 456677899999999999999999985 44454
No 40
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=78.95 E-value=1.3 Score=37.91 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=21.6
Q ss_pred CceEecCCChHHHHHHHHHHHHHcC
Q 035644 245 NHVFWDLYHPTQATARIFVDTIFDG 269 (285)
Q Consensus 245 ~ylfwD~~HPT~~~h~~iA~~~~~~ 269 (285)
.+..+|++||+.++|+.+|+.+.+.
T Consensus 183 ~~~~~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 183 ELLTEDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred ccccCCCCCcCHhhHHHHHHHHHHH
Confidence 4444999999999999999999874
No 41
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.47 E-value=6.2 Score=36.61 Aligned_cols=87 Identities=13% Similarity=0.056 Sum_probs=55.7
Q ss_pred EEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC-CCCCCCcc
Q 035644 138 KFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN-PTPQGFTE 216 (285)
Q Consensus 138 ~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n-P~~yGf~~ 216 (285)
+++.+++|+. -.+.+++-...+|...++.++++.. + ++|+++.+-+.-.+ ...+|++.
T Consensus 228 ~V~WvGmP~~--------------r~~~l~~dm~~ln~iy~~~vE~~~g-----k--~i~i~d~~v~e~G~~f~~~~~D~ 286 (354)
T COG2845 228 PVLWVGMPPF--------------RKKKLNADMVYLNKIYSKAVEKLGG-----K--FIDIWDGFVDEGGKDFVTTGVDI 286 (354)
T ss_pred cEEEeeCCCc--------------cccccchHHHHHHHHHHHHHHHhCC-----e--EEEecccccccCCceeEEecccc
Confidence 5788888774 2345666778999999988877632 2 36766655432222 11111110
Q ss_pred cccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 217 VKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 217 ~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
-..+-.+.-=|++|.|.++.+.+|.++.+
T Consensus 287 -----------------------NGq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 287 -----------------------NGQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred -----------------------CCceEEEeccCCceechhhHHHHHHHHHH
Confidence 11234556679999999999999999875
No 42
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=56.87 E-value=11 Score=28.55 Aligned_cols=25 Identities=28% Similarity=0.381 Sum_probs=13.9
Q ss_pred ChhhHHHHHHHHHHHHHHHhhhcccc
Q 035644 1 MASNVFLKFFLFFILAVFYLSFNSSE 26 (285)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (285)
|+|..|+=+-|||.+ +|++++.+++
T Consensus 1 MaSK~~llL~l~LA~-lLlisSevaa 25 (95)
T PF07172_consen 1 MASKAFLLLGLLLAA-LLLISSEVAA 25 (95)
T ss_pred CchhHHHHHHHHHHH-HHHHHhhhhh
Confidence 888775544444433 3455666554
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=54.02 E-value=34 Score=28.22 Aligned_cols=59 Identities=17% Similarity=0.258 Sum_probs=41.7
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEE---echhHHHH
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFD---TYSVMQSI 205 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~~~~~~~i 205 (285)
+.|.+.|+|+|+|+ |.+..... .....+.+.++++++++|+.+|.+.. .+..+.++
T Consensus 65 ~~l~~~g~~~vvVv--------P~FL~~G~-------------H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~p~l~~l 123 (154)
T PLN02757 65 GRCVEQGASRVIVS--------PFFLSPGR-------------HWQEDIPALTAEAAKEHPGVKYLVTAPIGLHELMVDV 123 (154)
T ss_pred HHHHHCCCCEEEEE--------EhhhcCCc-------------chHhHHHHHHHHHHHHCCCcEEEECCCCCCCHHHHHH
Confidence 77888999999985 66765321 12345678888899999999988753 45566666
Q ss_pred HhC
Q 035644 206 IQN 208 (285)
Q Consensus 206 ~~n 208 (285)
+.+
T Consensus 124 l~~ 126 (154)
T PLN02757 124 VND 126 (154)
T ss_pred HHH
Confidence 554
No 44
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=52.46 E-value=10 Score=32.30 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=18.3
Q ss_pred ecCCChHHHHHHHHHHHHHc
Q 035644 249 WDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 249 wD~~HPT~~~h~~iA~~~~~ 268 (285)
.|++|..+.+|+.+++.+.+
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 57999999999999999875
No 45
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=52.13 E-value=27 Score=26.18 Aligned_cols=48 Identities=23% Similarity=0.257 Sum_probs=34.2
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHH-HHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYN-EALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N-~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
++|.+.|+++|+|+ |.++... .|= ..+.+.+++++.++|+.++.+...
T Consensus 44 ~~l~~~g~~~ivvv--------P~fL~~G--------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 44 ERLVAQGARRIVVV--------PYFLFPG--------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HHHHCCTCSEEEEE--------EESSSSS--------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHcCCCeEEEE--------eeeecCc--------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 88999999999987 6665432 122 336788888999999998887553
No 46
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=51.69 E-value=41 Score=30.20 Aligned_cols=90 Identities=17% Similarity=0.291 Sum_probs=54.0
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHHhC
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSIIQN 208 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n 208 (285)
+.|....-+-=+|+++.|+-.+-.+... -.-..|..++ ..|+..+.++.++++ ++.||-.|.++.+-+.
T Consensus 159 ~~l~~~nP~~kiilTVSPVrl~~T~~~~-----d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lr- 227 (251)
T PF08885_consen 159 DLLRSINPDIKIILTVSPVRLIATFRDR-----DGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELR- 227 (251)
T ss_pred HHHHhhCCCceEEEEeccchhhcccccc-----cchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCccc-
Confidence 5566666654566778886433322221 1223344444 457788888877553 5678888877664322
Q ss_pred CCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEe--cCCChHHHHHHHHHHH
Q 035644 209 PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFW--DLYHPTQATARIFVDT 265 (285)
Q Consensus 209 P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfw--D~~HPT~~~h~~iA~~ 265 (285)
.|-|| |.+||++.+-..|-+.
T Consensus 228 ------------------------------------dyrfy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 228 ------------------------------------DYRFYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred ------------------------------------ccccccccCCCCCHHHHHHHHhh
Confidence 22233 7899999988877664
No 47
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=48.02 E-value=40 Score=27.04 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhCCCcEEEEEEechhHHHHHhC---------------CCCCCCcccccccccCcccCCccccCCCCccCC
Q 035644 177 LKSMLQELKSELNGMTYTYFDTYSVMQSIIQN---------------PTPQGFTEVKSACCGLGRLKAKVPCIPISSVCS 241 (285)
Q Consensus 177 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n---------------P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~ 241 (285)
|+-+|+.+++..-++-++..-++..+.+-+.= -.++||. +.+ -. . .
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf~-v~D----~s-------------~-~ 98 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGFN-VAD----FS-------------D-D 98 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE-----T-------------T-G
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEe----cc-------------c-C
Confidence 46677777776556667777777777664321 1234442 111 00 0 0
Q ss_pred CCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 242 NRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 242 ~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
.-+.|++-|.+||..+|+-.+-+.|..
T Consensus 99 ~y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 99 EYEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TTSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCCceeeecccCchhhHHHHHHHHHH
Confidence 126889999999999999888887764
No 48
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=44.24 E-value=49 Score=24.55 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=33.8
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEE
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFD 197 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 197 (285)
.++|.+.|+++++|. |.+..... .....+.+.+++++.++++.++.+.+
T Consensus 50 l~~l~~~g~~~v~vv--------Plfl~~G~-------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 50 LDELAAQGATRIVVV--------PLFLLAGG-------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHcCCCEEEEE--------eeEeCCCc-------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 488889999999986 65654321 12245666777777788988887754
No 49
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=38.40 E-value=79 Score=27.67 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=35.9
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHH
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQSI 205 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 205 (285)
+.|...|.|+|+++|- .+ + ....|+..++++++++++.++.++|...+....
T Consensus 93 ~sl~~~Gf~~ivivng------------Hg--G-----------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 93 RSLARHGFRRIVIVNG------------HG--G-----------NIAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp HHHHHHT--EEEEEES------------ST--T-----------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred HHHHHcCCCEEEEEEC------------CH--h-----------HHHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 8899999999999972 11 1 112456667777777889999999998886654
No 50
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=37.94 E-value=66 Score=25.76 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhC
Q 035644 163 NEEASHWSVMYNEALKSMLQELKSEL 188 (285)
Q Consensus 163 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 188 (285)
.++.+.++..||+.|++.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56677889999999999999999875
No 51
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=36.79 E-value=74 Score=22.86 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=31.4
Q ss_pred HcCCcEEEEecCCCCCCcCcccccC-CcchhhhHHHH---HHHHHHHHHHHHHHHHHhhCCCcEE-EEEE
Q 035644 133 GYGARKFVCVGLGVIGCIPAQRIKS-QTEECNEEASH---WSVMYNEALKSMLQELKSELNGMTY-TYFD 197 (285)
Q Consensus 133 ~~GAr~~~v~nlpplg~~P~~~~~~-~~~~~~~~~~~---~~~~~N~~L~~~l~~l~~~~~~~~i-~~~D 197 (285)
=-|||.|+++.++=..-.|...... ...+....... --+..-++|+++++.++++.++.+. .++|
T Consensus 8 ~p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 3589999999876544111111111 11122222222 1222235666666667777777543 3455
No 52
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=36.68 E-value=76 Score=27.65 Aligned_cols=113 Identities=16% Similarity=0.098 Sum_probs=62.6
Q ss_pred HHHHHc-CCcEEEEecCCCCCCc----Ccccc---cCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEech
Q 035644 129 LRLYGY-GARKFVCVGLGVIGCI----PAQRI---KSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYS 200 (285)
Q Consensus 129 ~~L~~~-GAr~~~v~nlpplg~~----P~~~~---~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~ 200 (285)
++|.+. .--+|+|++.|++--. |.... ..-........++.++.+|+.+++..++. ...++.++|++.
T Consensus 138 ~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~----~~~~v~fvD~~~ 213 (259)
T cd01823 138 DRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA----GDYKVRFVDTDA 213 (259)
T ss_pred HHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----CCceEEEEECCC
Confidence 445433 3347899998875321 00000 00000234556677777777776665543 335699999988
Q ss_pred hHHHHHhCCCCCCCcccccccccCcccCCccccCCCCccCCCCCCceEecCCChHHHHHHHHHHHHHc
Q 035644 201 VMQSIIQNPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFD 268 (285)
Q Consensus 201 ~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 268 (285)
.|.. ...|..... +. +. .+......-|++||++++|+.||+.+.+
T Consensus 214 ~f~~-------------~~~~~~~~~------~~-~~---~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 214 PFAG-------------HRACSPDPW------SR-SV---LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CcCC-------------CccccCCCc------cc-cc---cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 6652 122322110 00 00 0122334579999999999999999875
No 53
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=31.11 E-value=1.8e+02 Score=27.04 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=34.6
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|+++++|.. .-+ .+ .+..+ =|.-+++.+..+++++|+.- ++.|+
T Consensus 57 ~~~~~~~Gi~~v~LFgv~~~-Kd~-----~g----s~A~~-----~~g~v~~air~iK~~~p~l~-vi~Dv 111 (314)
T cd00384 57 AEELADLGIRAVILFGIPEH-KDE-----IG----SEAYD-----PDGIVQRAIRAIKEAVPELV-VITDV 111 (314)
T ss_pred HHHHHHCCCCEEEEECCCCC-CCC-----Cc----ccccC-----CCChHHHHHHHHHHhCCCcE-EEEee
Confidence 48999999999999999642 222 11 11111 12446677788888888753 44454
No 54
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=30.72 E-value=2e+02 Score=26.25 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=47.8
Q ss_pred HHHHHcCCcEEEEecCCCCCCcCcccccCC----------------cchhhhHHHHHHHHH---------------HHHH
Q 035644 129 LRLYGYGARKFVCVGLGVIGCIPAQRIKSQ----------------TEECNEEASHWSVMY---------------NEAL 177 (285)
Q Consensus 129 ~~L~~~GAr~~~v~nlpplg~~P~~~~~~~----------------~~~~~~~~~~~~~~~---------------N~~L 177 (285)
++|..+|.|.|+|..-|- ..|.++...+ ..+....+- ..+.| -..|
T Consensus 39 ~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~-~a~~fv~~~~f~l~LGDNi~~~~l 115 (286)
T COG1209 39 ETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVL-IAEDFVGDDDFVLYLGDNIFQDGL 115 (286)
T ss_pred HHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHH-HHHhhcCCCceEEEecCceeccCh
Confidence 999999999999998762 1233322211 112111111 22222 1267
Q ss_pred HHHHHHHHhhCCCcEEEEEEechhHHHHHhCCCCCCCcccc
Q 035644 178 KSMLQELKSELNGMTYTYFDTYSVMQSIIQNPTPQGFTEVK 218 (285)
Q Consensus 178 ~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~ 218 (285)
.+.++.+.++-+|+.|...-+ +||.+||..+..
T Consensus 116 ~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~d 148 (286)
T COG1209 116 SELLEHFAEEGSGATILLYEV--------DDPSRYGVVEFD 148 (286)
T ss_pred HHHHHHHhccCCCcEEEEEEc--------CCcccceEEEEc
Confidence 788888877777888776654 489999976544
No 55
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=30.51 E-value=1.2e+02 Score=28.19 Aligned_cols=56 Identities=7% Similarity=-0.037 Sum_probs=34.7
Q ss_pred hHHHHHcCCcEEEEecCCC-CCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGV-IGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpp-lg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|++++++| -..-+... +..+ =|.-+++.+..+++++|+. +++.|+
T Consensus 60 v~~~~~~Gi~~v~lFgv~~~~~KD~~gs---------~A~~-----~~g~v~~air~iK~~~p~l-~vi~DV 116 (320)
T cd04823 60 AEEAVDLGIPAVALFPVTPPELKSEDGS---------EAYN-----PDNLVCRAIRAIKEAFPEL-GIITDV 116 (320)
T ss_pred HHHHHHcCCCEEEEecCCCcccCCcccc---------cccC-----CCChHHHHHHHHHHhCCCc-EEEEee
Confidence 4899999999999999844 21222111 1111 1244667778888888885 344554
No 56
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=29.77 E-value=1.3e+02 Score=27.63 Aligned_cols=51 Identities=12% Similarity=0.253 Sum_probs=37.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhCCCc----EEEEEEechhHHHHHhCCCCCCCcccc
Q 035644 162 CNEEASHWSVMYNEALKSMLQELKSELNGM----TYTYFDTYSVMQSIIQNPTPQGFTEVK 218 (285)
Q Consensus 162 ~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~ 218 (285)
-.+.+.+-.+.||.+|.+.=.++..++.-+ -+++-|.|..|++ .||++.+.
T Consensus 178 ~~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~G 232 (318)
T COG4531 178 NAAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPLG 232 (318)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCccccc
Confidence 455666667889999988777776665432 4888999999997 67777543
No 57
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=28.70 E-value=2.4e+02 Score=23.34 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=35.8
Q ss_pred HHHHHcCCc-EEEEecCC-CCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHH
Q 035644 129 LRLYGYGAR-KFVCVGLG-VIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDTYSVMQS 204 (285)
Q Consensus 129 ~~L~~~GAr-~~~v~nlp-plg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 204 (285)
+++.+.+.+ +|+|++++ |.. .... -...+++.++.||+.+++..++. -++.++|+++.+..
T Consensus 113 ~~ir~~~p~~~Ivv~~~~~p~~-----~~~~----~~~~~~~~~~~~n~~~~~~a~~~------~~v~~vd~~~~~~~ 175 (204)
T cd04506 113 KEIRKLNPDAPIFLVGLYNPFY-----VYFP----NITEINDIVNDWNEASQKLASQY------KNAYFVPIFDLFSD 175 (204)
T ss_pred HHHHHHCCCCeEEEEecCCccc-----cccc----hHHHHHHHHHHHHHHHHHHHHhC------CCeEEEehHHhhcC
Confidence 556665433 67777653 321 1111 12345677888998877765431 24888999987764
No 58
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=28.42 E-value=1.9e+02 Score=22.72 Aligned_cols=45 Identities=18% Similarity=0.094 Sum_probs=29.7
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYF 196 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 196 (285)
.++|.+.|+++|+|. |.+... + ..| ..|.+.+++++ ++..+|.+.
T Consensus 62 L~~l~~~G~~~V~V~--------Pl~l~~-G------------~e~-~di~~~v~~~~--~~~~~i~~g 106 (127)
T cd03412 62 LAKLAADGYTEVIVQ--------SLHIIP-G------------EEY-EKLKREVDAFK--KGFKKIKLG 106 (127)
T ss_pred HHHHHHCCCCEEEEE--------eCeeEC-c------------HHH-HHHHHHHHHHh--CCCceEEEc
Confidence 489999999999998 444332 1 123 56667777766 566666654
No 59
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=28.14 E-value=2e+02 Score=26.84 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=34.8
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|+++++|.. .-+ .+ .+..+ =|.-+++.+..+++++|+.- ++.|+
T Consensus 65 v~~~~~~Gi~av~LFgv~~~-Kd~-----~g----s~A~~-----~~g~v~rair~iK~~~p~l~-vi~DV 119 (323)
T PRK09283 65 AEEAVELGIPAVALFGVPEL-KDE-----DG----SEAYN-----PDGLVQRAIRAIKKAFPELG-VITDV 119 (323)
T ss_pred HHHHHHCCCCEEEEeCcCCC-CCc-----cc----ccccC-----CCCHHHHHHHHHHHhCCCcE-EEEee
Confidence 48999999999999998432 222 11 11111 13446677888888888864 44554
No 60
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=27.99 E-value=1.2e+02 Score=23.68 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhC
Q 035644 162 CNEEASHWSVMYNEALKSMLQELKSEL 188 (285)
Q Consensus 162 ~~~~~~~~~~~~N~~L~~~l~~l~~~~ 188 (285)
-.++.+.++..||+.|++.|+++++++
T Consensus 56 te~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 56 SEAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 356677889999999999999999876
No 61
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=27.94 E-value=1.8e+02 Score=22.03 Aligned_cols=46 Identities=24% Similarity=0.410 Sum_probs=29.7
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYF 196 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 196 (285)
.++|.+.|+++++|. |.+.... .|.+.+...+++++++ |+.++.+.
T Consensus 51 l~~l~~~g~~~i~vv--------P~fL~~G--------------~h~~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 51 LERLRALGARRVVVL--------PYLLFTG--------------VLMDRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHcCCCEEEEE--------echhcCC--------------chHHHHHHHHHHHHhC-CCceEEEC
Confidence 378888999999986 5555432 1112355667777766 77777653
No 62
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=26.72 E-value=2.2e+02 Score=26.49 Aligned_cols=55 Identities=22% Similarity=0.236 Sum_probs=35.4
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|+++++|+. .-+ .+ .+..+ =|.-+++.+..+++++|+.- ++.|+
T Consensus 67 ~~~~~~~Gi~~v~lFgv~~~-Kd~-----~g----s~A~~-----~~g~v~~air~iK~~~pdl~-vi~DV 121 (322)
T PRK13384 67 IERLYALGIRYVMPFGISHH-KDA-----KG----SDTWD-----DNGLLARMVRTIKAAVPEMM-VIPDI 121 (322)
T ss_pred HHHHHHcCCCEEEEeCCCCC-CCC-----Cc----ccccC-----CCChHHHHHHHHHHHCCCeE-EEeee
Confidence 48999999999999999642 222 11 11111 13456777888888888864 44454
No 63
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=26.27 E-value=98 Score=23.74 Aligned_cols=31 Identities=10% Similarity=0.291 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEechhHHHHHh
Q 035644 176 ALKSMLQELKSELNGMTYTYFDTYSVMQSIIQ 207 (285)
Q Consensus 176 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 207 (285)
.+.-.+.+|..+|+++.++-+|+.. ..++.+
T Consensus 38 ~i~P~~~~La~~y~~v~Flkvdvde-~~~~~~ 68 (106)
T KOG0907|consen 38 AIAPKFEKLAEKYPDVVFLKVDVDE-LEEVAK 68 (106)
T ss_pred hhhhHHHHHHHHCCCCEEEEEeccc-CHhHHH
Confidence 3456888899999999999999998 555544
No 64
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=25.28 E-value=31 Score=29.31 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=12.8
Q ss_pred CCCEEEEeCCccccc
Q 035644 29 MVPAVFVFGDSLVDV 43 (285)
Q Consensus 29 ~~~~l~vFGDSlsD~ 43 (285)
....+++||||.+|.
T Consensus 201 ~~~~~~~~GD~~ND~ 215 (254)
T PF08282_consen 201 SPEDIIAFGDSENDI 215 (254)
T ss_dssp SGGGEEEEESSGGGH
T ss_pred ccceeEEeecccccH
Confidence 346899999999997
No 65
>PHA03289 envelope glycoprotein I; Provisional
Probab=24.78 E-value=99 Score=28.78 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhhhc-cccCCCCCEEEEeCCcccccCCC
Q 035644 7 LKFFLFFILAVFYLSFN-SSEAQMVPAVFVFGDSLVDVGNN 46 (285)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~vFGDSlsD~Gn~ 46 (285)
-.+..++|++|+. ..+ .+-..+-++||+ ||+-||--..
T Consensus 273 s~~~~~~~~~l~i-~~~~~~~~s~~~~iy~-g~~~s~~~~~ 311 (352)
T PHA03289 273 SAYLVLCIIALLI-VTVCSACKSPRRRIYI-GNEPSDLTSL 311 (352)
T ss_pred HHHHHHHHHHHHH-HHHHHHcCCCCCceec-CCCCcccchh
Confidence 3456677777754 344 333356667776 9999996543
No 66
>PF15240 Pro-rich: Proline-rich
Probab=24.73 E-value=61 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.328 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhhhccccCC
Q 035644 10 FLFFILAVFYLSFNSSEAQ 28 (285)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (285)
.+||.++||+||+|.....
T Consensus 3 lVLLSvALLALSSAQ~~dE 21 (179)
T PF15240_consen 3 LVLLSVALLALSSAQSTDE 21 (179)
T ss_pred hHHHHHHHHHhhhcccccc
Confidence 4577788889999965433
No 67
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=23.39 E-value=2.6e+02 Score=26.13 Aligned_cols=57 Identities=12% Similarity=0.196 Sum_probs=33.2
Q ss_pred hHHHHHcCCcEEEEecCCCCCCcCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGVIGCIPAQRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|+++++.+ |..+...+. +.. .=|.-+++.+..+++.+|+. +++.|+
T Consensus 63 v~~~~~~GI~~v~lFgvi~----~~~Kd~~gs----~a~-----~~~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 63 VEEAVDLGIRAVILFGVID----PSKKDEEGS----EAY-----NPDGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp HHHHHHTT--EEEEEEE-S----CSC-BSS-G----GGG-----STTSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred HHHHHHCCCCEEEEEeeCC----cccCCcchh----ccc-----CCCChHHHHHHHHHHhCCCc-EEEEec
Confidence 4899999999999998843 333322221 111 11345567788888889985 455665
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=22.95 E-value=45 Score=29.69 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=14.1
Q ss_pred CCCEEEEeCCcccccCC
Q 035644 29 MVPAVFVFGDSLVDVGN 45 (285)
Q Consensus 29 ~~~~l~vFGDSlsD~Gn 45 (285)
....+++||||..|.-=
T Consensus 205 ~~~~viafGDs~NDi~M 221 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPL 221 (271)
T ss_pred CCceEEEEcCCHHHHHH
Confidence 55789999999999743
No 69
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=22.26 E-value=1.8e+02 Score=27.10 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=34.8
Q ss_pred hHHHHHcCCcEEEEecCCCCC-CcCc-ccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEEe
Q 035644 128 SLRLYGYGARKFVCVGLGVIG-CIPA-QRIKSQTEECNEEASHWSVMYNEALKSMLQELKSELNGMTYTYFDT 198 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nlpplg-~~P~-~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (285)
.+.+.++|.+.|+++++|+-. .-+. .... -.=|.-+++.++.+++++|+.- ++.|+
T Consensus 57 ~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs~a--------------~~~~g~v~~air~iK~~~pdl~-vi~Dv 114 (320)
T cd04824 57 LRPLVAKGLRSVILFGVPLKPGKDDRSGSAA--------------DDEDGPVIQAIKLIREEFPELL-IACDV 114 (320)
T ss_pred HHHHHHCCCCEEEEeCCCccccCCcCccccc--------------cCCCChHHHHHHHHHHhCCCcE-EEEee
Confidence 489999999999999996532 3332 1100 0112345677777888888753 44454
No 70
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=21.98 E-value=31 Score=23.65 Aligned_cols=8 Identities=50% Similarity=1.477 Sum_probs=6.9
Q ss_pred EecCCChH
Q 035644 248 FWDLYHPT 255 (285)
Q Consensus 248 fwD~~HPT 255 (285)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 79999995
No 71
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=21.74 E-value=59 Score=23.45 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=13.5
Q ss_pred hHHHHHcCCcEEEEecC
Q 035644 128 SLRLYGYGARKFVCVGL 144 (285)
Q Consensus 128 ~~~L~~~GAr~~~v~nl 144 (285)
.++|.++||+.|+|..+
T Consensus 56 ~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 56 MDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHCTT-EEEEEEE-
T ss_pred HHHHHHcCCCEEEEEec
Confidence 38999999999999865
No 72
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=21.05 E-value=53 Score=28.87 Aligned_cols=18 Identities=28% Similarity=0.152 Sum_probs=15.0
Q ss_pred CCEEEEeCCcccccCCCC
Q 035644 30 VPAVFVFGDSLVDVGNNN 47 (285)
Q Consensus 30 ~~~l~vFGDSlsD~Gn~~ 47 (285)
...+++||||.+|..=..
T Consensus 194 ~~~~~a~GD~~ND~~Ml~ 211 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLE 211 (256)
T ss_pred CceEEEEcCCHhhHHHHH
Confidence 678999999999986543
Done!